1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 112981ebdbSBarry Smith in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/ 122981ebdbSBarry Smith does not exist and petscconf.h is in the same directory as the other PETSc include files. 13d382aafbSBarry Smith */ 14d382aafbSBarry Smith #include "petscconf.h" 15d382aafbSBarry Smith #include "petscfix.h" 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 29ea0fecefSShri Abhyankar #define _GNU_SOURCE 30ea0fecefSShri Abhyankar #endif 3173fca5a0SBarry Smith #endif 3273fca5a0SBarry Smith 33d382aafbSBarry Smith /* ========================================================================== */ 34d382aafbSBarry Smith /* 352981ebdbSBarry Smith This facilitates using the C version of PETSc from C++ and the 36e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 37d382aafbSBarry Smith */ 38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 40d382aafbSBarry Smith #endif 411ec50b02SJed Brown 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 49014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 50014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 51014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY) 52014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 53014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 54d382aafbSBarry Smith #else 55014dd563SJed Brown # define PETSC_DLLEXPORT 56014dd563SJed Brown # define PETSC_DLLIMPORT 57014dd563SJed Brown #endif 58014dd563SJed Brown 59014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 60014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 61014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 62014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 63014dd563SJed Brown #endif 64014dd563SJed Brown 65014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 66014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 67638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C" 68014dd563SJed Brown #else 69014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 70638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF 71d382aafbSBarry Smith #endif 72d382aafbSBarry Smith /* ========================================================================== */ 73d382aafbSBarry Smith /* 74d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 75d382aafbSBarry Smith Web page 76d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 77d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 78d382aafbSBarry Smith src/docs/website/index.html. 79d382aafbSBarry Smith */ 80d382aafbSBarry Smith #include "petscversion.h" 81301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 82d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 83301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 84d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 85301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 86d382aafbSBarry Smith #else 87301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 88301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 89d382aafbSBarry Smith #endif 90d382aafbSBarry Smith 91d382aafbSBarry Smith /*MC 92d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 93d382aafbSBarry Smith 94d382aafbSBarry Smith Input Parameter: 95d382aafbSBarry Smith . len - length of the string 96d382aafbSBarry Smith 97d382aafbSBarry Smith Output Parameter: 98d382aafbSBarry Smith . version - version string 99d382aafbSBarry Smith 100d382aafbSBarry Smith Level: developer 101d382aafbSBarry Smith 102d382aafbSBarry Smith Usage: 103d382aafbSBarry Smith char version[256]; 104d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 105d382aafbSBarry Smith 106d382aafbSBarry Smith Fortran Note: 107d382aafbSBarry Smith This routine is not supported in Fortran. 108d382aafbSBarry Smith 109d382aafbSBarry Smith .seealso: PetscGetProgramName() 110d382aafbSBarry Smith 111d382aafbSBarry Smith M*/ 112d382aafbSBarry Smith 113d382aafbSBarry Smith /* ========================================================================== */ 114d382aafbSBarry Smith 115d382aafbSBarry Smith /* 116d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 117d382aafbSBarry Smith 118d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 119d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 120d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 121d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 122d382aafbSBarry Smith mpicxx.h directly in their code 123d382aafbSBarry Smith */ 124d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 125d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 126d382aafbSBarry Smith #include "mpi.h" 12765013866SBarry Smith 128d382aafbSBarry Smith /* 1292981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 130d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 131d382aafbSBarry Smith */ 132d382aafbSBarry Smith #include <stdio.h> 133d382aafbSBarry Smith 134d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 135d382aafbSBarry Smith #if !defined(MPIAPI) 136d382aafbSBarry Smith #define MPIAPI 137d382aafbSBarry Smith #endif 138d382aafbSBarry Smith 139b3506946SBarry Smith 140d382aafbSBarry Smith /*MC 141d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 142d382aafbSBarry Smith 143d382aafbSBarry Smith Level: beginner 144d382aafbSBarry Smith 145d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 146d382aafbSBarry Smith M*/ 147d382aafbSBarry Smith typedef int PetscErrorCode; 148d382aafbSBarry Smith 149d382aafbSBarry Smith /*MC 150d382aafbSBarry Smith 151503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 152d382aafbSBarry Smith (internal integer in the data structure used for error 1532981ebdbSBarry Smith checking). These are all computed by an offset from the lowest 1540700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 155d382aafbSBarry Smith 156d382aafbSBarry Smith Level: advanced 157d382aafbSBarry Smith 1580700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 159d382aafbSBarry Smith M*/ 1600700a824SBarry Smith typedef int PetscClassId; 161d382aafbSBarry Smith 162d382aafbSBarry Smith 163d382aafbSBarry Smith /*MC 164d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 165d382aafbSBarry Smith 166d382aafbSBarry Smith Level: intermediate 167d382aafbSBarry Smith 168d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1693b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 170d382aafbSBarry Smith 1713b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 1722981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 173d382aafbSBarry Smith 1743b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 1752981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 176d382aafbSBarry Smith 177d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 178d382aafbSBarry Smith 179d382aafbSBarry Smith M*/ 180d382aafbSBarry Smith typedef int PetscMPIInt; 181d382aafbSBarry Smith 182d382aafbSBarry Smith /*MC 183d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 184d382aafbSBarry Smith 185d382aafbSBarry Smith Level: intermediate 186d382aafbSBarry Smith 187d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 188d382aafbSBarry Smith M*/ 189d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 190d382aafbSBarry Smith 191d382aafbSBarry Smith /*MC 192d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 1933b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 194d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 195d382aafbSBarry Smith 196d382aafbSBarry Smith Level: intermediate 197d382aafbSBarry Smith 198d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 199d382aafbSBarry Smith M*/ 200f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8) 201f505b413SSatish Balay typedef long long Petsc64bitInt; 202f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 203236ed0a3SSatish Balay typedef __int64 Petsc64bitInt; 204236ed0a3SSatish Balay #else 205f505b413SSatish Balay typedef unknown64bit Petsc64bitInt 206236ed0a3SSatish Balay #endif 207d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 208236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt; 209d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 210d382aafbSBarry Smith #else 211d382aafbSBarry Smith typedef int PetscInt; 212d382aafbSBarry Smith #define MPIU_INT MPI_INT 213d382aafbSBarry Smith #endif 214236ed0a3SSatish Balay 215d382aafbSBarry Smith 216702bc34aSSatish Balay /*MC 217702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 218702bc34aSSatish Balay 219702bc34aSSatish Balay Level: intermediate 220702bc34aSSatish Balay 221702bc34aSSatish Balay Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 222702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 223702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 224702bc34aSSatish Balay 225702bc34aSSatish Balay PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2262981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 227702bc34aSSatish Balay 228702bc34aSSatish Balay PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2292981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 230702bc34aSSatish Balay 2312981ebdbSBarry Smith Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 232702bc34aSSatish Balay if you run ./configure with the option 233702bc34aSSatish Balay --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 2342981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 2352981ebdbSBarry Smith 2362981ebdbSBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 2372981ebdbSBarry Smith 2382981ebdbSBarry Smith Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 239702bc34aSSatish Balay 240702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 241702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 242702bc34aSSatish Balay 243702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt 244702bc34aSSatish Balay 245702bc34aSSatish Balay M*/ 246702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 247702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt; 248702bc34aSSatish Balay #else 249702bc34aSSatish Balay typedef int PetscBLASInt; 250702bc34aSSatish Balay #endif 251702bc34aSSatish Balay 25258b60935SBarry Smith /*EC 25358b60935SBarry Smith 2542981ebdbSBarry Smith PetscPrecision - indicates what precision the object is using. This is currently not used. 25558b60935SBarry Smith 25658b60935SBarry Smith Level: advanced 25758b60935SBarry Smith 25858b60935SBarry Smith .seealso: PetscObjectSetPrecision() 25958b60935SBarry Smith E*/ 26058b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 261014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[]; 26258b60935SBarry Smith 263503cfb0cSBarry Smith /* 264503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 265503cfb0cSBarry Smith */ 266d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 267d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 268d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 270d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 271d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 272d382aafbSBarry Smith #else 273d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 274d382aafbSBarry Smith #endif 275d382aafbSBarry Smith 276d382aafbSBarry Smith 277d382aafbSBarry Smith /* 278d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 279d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 280d382aafbSBarry Smith */ 281014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 282d382aafbSBarry Smith 283d382aafbSBarry Smith /* 284d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 285d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 286d382aafbSBarry Smith */ 287014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 288d382aafbSBarry Smith 289d382aafbSBarry Smith /*MC 290d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 291d382aafbSBarry Smith 292d382aafbSBarry Smith Synopsis: 293ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 294d382aafbSBarry Smith 295eca87e8dSBarry Smith Not Collective 296eca87e8dSBarry Smith 297d382aafbSBarry Smith Input Parameters: 298d382aafbSBarry Smith . cond - condition or expression 299d382aafbSBarry Smith 300d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 301d382aafbSBarry Smith branch is unlikely. 302d382aafbSBarry Smith 303d382aafbSBarry Smith Level: advanced 304d382aafbSBarry Smith 305d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 306d382aafbSBarry Smith M*/ 307d382aafbSBarry Smith 308d382aafbSBarry Smith /*MC 309d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 310d382aafbSBarry Smith 311d382aafbSBarry Smith Synopsis: 312ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 313d382aafbSBarry Smith 314eca87e8dSBarry Smith Not Collective 315eca87e8dSBarry Smith 316d382aafbSBarry Smith Input Parameters: 317d382aafbSBarry Smith . cond - condition or expression 318d382aafbSBarry Smith 319d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 320d382aafbSBarry Smith branch is likely. 321d382aafbSBarry Smith 322d382aafbSBarry Smith Level: advanced 323d382aafbSBarry Smith 324d382aafbSBarry Smith .seealso: PetscUnlikely() 325d382aafbSBarry Smith M*/ 326d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 327d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 328d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 329d382aafbSBarry Smith #else 330cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 331cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 332d382aafbSBarry Smith #endif 333d382aafbSBarry Smith 334d382aafbSBarry Smith /* 335d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 336d382aafbSBarry Smith */ 337d382aafbSBarry Smith #include "petscmath.h" 338d382aafbSBarry Smith 339d382aafbSBarry Smith /* 340d382aafbSBarry Smith Declare extern C stuff after including external header files 341d382aafbSBarry Smith */ 342d382aafbSBarry Smith 343d382aafbSBarry Smith 344d382aafbSBarry Smith /* 345d382aafbSBarry Smith Basic PETSc constants 346d382aafbSBarry Smith */ 347d382aafbSBarry Smith 348d382aafbSBarry Smith /*E 349ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: beginner 352d382aafbSBarry Smith 353ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 35434e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 35534e82e7dSBarry Smith 356d382aafbSBarry Smith E*/ 357ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 358014dd563SJed Brown PETSC_EXTERN const char *PetscBools[]; 35970b3c8c7SBarry Smith 36070b3c8c7SBarry Smith /*E 36170b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 36270b3c8c7SBarry Smith 36370b3c8c7SBarry Smith Level: beginner 36470b3c8c7SBarry Smith 36570b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 36670b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 36770b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 36870b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 36970b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 37070b3c8c7SBarry Smith 37170b3c8c7SBarry Smith E*/ 37270b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 373014dd563SJed Brown PETSC_EXTERN const char *PetscCopyModes[]; 374d382aafbSBarry Smith 375d382aafbSBarry Smith /*MC 376ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 377d382aafbSBarry Smith 378d382aafbSBarry Smith Level: beginner 379d382aafbSBarry Smith 380d382aafbSBarry Smith Note: Zero integer 381d382aafbSBarry Smith 382ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 383d382aafbSBarry Smith M*/ 384d382aafbSBarry Smith 385d382aafbSBarry Smith /*MC 386ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 387d382aafbSBarry Smith 388d382aafbSBarry Smith Level: beginner 389d382aafbSBarry Smith 390d382aafbSBarry Smith Note: Nonzero integer 391d382aafbSBarry Smith 392ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 393d382aafbSBarry Smith M*/ 394d382aafbSBarry Smith 395d382aafbSBarry Smith /*MC 396d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 397d382aafbSBarry Smith 398d382aafbSBarry Smith Level: beginner 399d382aafbSBarry Smith 400d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 401d382aafbSBarry Smith some default 402d382aafbSBarry Smith 403d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 404503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 405d382aafbSBarry Smith 40634e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 40734e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 40834e82e7dSBarry Smith 409d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 410d382aafbSBarry Smith 411d382aafbSBarry Smith M*/ 412d382aafbSBarry Smith #define PETSC_NULL 0 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 415d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 420d382aafbSBarry Smith some default 421d382aafbSBarry Smith 422d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 423d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 424d382aafbSBarry Smith 425d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 426d382aafbSBarry Smith 427d382aafbSBarry Smith M*/ 428d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 429d382aafbSBarry Smith 430d382aafbSBarry Smith /*MC 431557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 432557d4da8SBarry Smith where you wish PETSc to use the default. 433557d4da8SBarry Smith 434557d4da8SBarry Smith Level: beginner 435557d4da8SBarry Smith 436557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 437557d4da8SBarry Smith 438557d4da8SBarry Smith M*/ 439557d4da8SBarry Smith #define PETSC_DECIDE -1 440557d4da8SBarry Smith 441557d4da8SBarry Smith /*MC 442d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 443d382aafbSBarry Smith where you wish PETSc to compute the required value. 444d382aafbSBarry Smith 445d382aafbSBarry Smith Level: beginner 446d382aafbSBarry Smith 447557d4da8SBarry Smith 448557d4da8SBarry Smith Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 449557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 450557d4da8SBarry Smith 451d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 452d382aafbSBarry Smith 453d382aafbSBarry Smith M*/ 454d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 455d382aafbSBarry Smith 456d382aafbSBarry Smith /*MC 457557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 458557d4da8SBarry Smith where you wish PETSc to use the default. 459557d4da8SBarry Smith 460557d4da8SBarry Smith Level: beginner 461557d4da8SBarry Smith 462557d4da8SBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 463557d4da8SBarry Smith 464557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 465557d4da8SBarry Smith 466557d4da8SBarry Smith M*/ 467557d4da8SBarry Smith #define PETSC_DEFAULT -2 468557d4da8SBarry Smith 469557d4da8SBarry Smith /*MC 470d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 471d382aafbSBarry Smith all the processs that PETSc knows about. 472d382aafbSBarry Smith 473d382aafbSBarry Smith Level: beginner 474d382aafbSBarry Smith 475d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 476d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 477d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 478d382aafbSBarry Smith PetscInitialize() 479d382aafbSBarry Smith 480d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 481d382aafbSBarry Smith 482d382aafbSBarry Smith M*/ 483014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 484d382aafbSBarry Smith 485d382aafbSBarry Smith /*MC 486503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 487d382aafbSBarry Smith 488d382aafbSBarry Smith Level: beginner 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 494d382aafbSBarry Smith 495014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 496014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 497014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize; 498d382aafbSBarry Smith 499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 502d382aafbSBarry Smith 503d382aafbSBarry Smith /*MC 504d382aafbSBarry Smith PetscMalloc - Allocates memory 505d382aafbSBarry Smith 506eca87e8dSBarry Smith Synopsis: 507eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 508eca87e8dSBarry Smith 509eca87e8dSBarry Smith Not Collective 510eca87e8dSBarry Smith 511d382aafbSBarry Smith Input Parameter: 512d382aafbSBarry Smith . m - number of bytes to allocate 513d382aafbSBarry Smith 514d382aafbSBarry Smith Output Parameter: 515d382aafbSBarry Smith . result - memory allocated 516d382aafbSBarry Smith 517d382aafbSBarry Smith Level: beginner 518d382aafbSBarry Smith 519d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 520d382aafbSBarry Smith 521d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 522d382aafbSBarry Smith properly handle not freeing the null pointer. 523d382aafbSBarry Smith 524d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 525d382aafbSBarry Smith 526d382aafbSBarry Smith Concepts: memory allocation 527d382aafbSBarry Smith 528d382aafbSBarry Smith M*/ 5292714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 530d382aafbSBarry Smith 531d382aafbSBarry Smith /*MC 532503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 533d382aafbSBarry Smith 534d382aafbSBarry Smith Synopsis: 535d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 536d382aafbSBarry Smith 537eca87e8dSBarry Smith Not Collective 538eca87e8dSBarry Smith 539eca87e8dSBarry Smith Input Parameters: 540eca87e8dSBarry Smith . addr - address to align (any pointer type) 541eca87e8dSBarry Smith 542d382aafbSBarry Smith Level: developer 543d382aafbSBarry Smith 544d382aafbSBarry Smith .seealso: PetscMallocAlign() 545d382aafbSBarry Smith 546d382aafbSBarry Smith Concepts: memory allocation 547d382aafbSBarry Smith M*/ 548d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 549d382aafbSBarry Smith 550d382aafbSBarry Smith /*MC 551503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 552d382aafbSBarry Smith 553eca87e8dSBarry Smith Synopsis: 554eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 555eca87e8dSBarry Smith 556eca87e8dSBarry Smith Not Collective 557eca87e8dSBarry Smith 558d382aafbSBarry Smith Input Parameter: 559d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 560d382aafbSBarry Smith . t1 - type of first memory elements 561d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 562d382aafbSBarry Smith - t2 - type of second memory elements 563d382aafbSBarry Smith 564d382aafbSBarry Smith Output Parameter: 565d382aafbSBarry Smith + r1 - memory allocated in first chunk 566d382aafbSBarry Smith - r2 - memory allocated in second chunk 567d382aafbSBarry Smith 568d382aafbSBarry Smith Level: developer 569d382aafbSBarry Smith 570d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 571d382aafbSBarry Smith 572d382aafbSBarry Smith Concepts: memory allocation 573d382aafbSBarry Smith 574d382aafbSBarry Smith M*/ 575d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 576d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 577d382aafbSBarry Smith #else 5782981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 579d382aafbSBarry Smith #endif 580d382aafbSBarry Smith 581d382aafbSBarry Smith /*MC 582503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 583d382aafbSBarry Smith 584eca87e8dSBarry Smith Synopsis: 585eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 586eca87e8dSBarry Smith 587eca87e8dSBarry Smith Not Collective 588eca87e8dSBarry Smith 589d382aafbSBarry Smith Input Parameter: 590d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 591d382aafbSBarry Smith . t1 - type of first memory elements 592d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 593d382aafbSBarry Smith . t2 - type of second memory elements 594d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 595d382aafbSBarry Smith - t3 - type of third memory elements 596d382aafbSBarry Smith 597d382aafbSBarry Smith Output Parameter: 598d382aafbSBarry Smith + r1 - memory allocated in first chunk 599d382aafbSBarry Smith . r2 - memory allocated in second chunk 600d382aafbSBarry Smith - r3 - memory allocated in third chunk 601d382aafbSBarry Smith 602d382aafbSBarry Smith Level: developer 603d382aafbSBarry Smith 604d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 605d382aafbSBarry Smith 606d382aafbSBarry Smith Concepts: memory allocation 607d382aafbSBarry Smith 608d382aafbSBarry Smith M*/ 609d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 610d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 611d382aafbSBarry Smith #else 6123b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 613d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 614d382aafbSBarry Smith #endif 615d382aafbSBarry Smith 616d382aafbSBarry Smith /*MC 617503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 618d382aafbSBarry Smith 619eca87e8dSBarry Smith Synopsis: 620eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 621eca87e8dSBarry Smith 622eca87e8dSBarry Smith Not Collective 623eca87e8dSBarry Smith 624d382aafbSBarry Smith Input Parameter: 625d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 626d382aafbSBarry Smith . t1 - type of first memory elements 627d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 628d382aafbSBarry Smith . t2 - type of second memory elements 629d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 630d382aafbSBarry Smith . t3 - type of third memory elements 631d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 632d382aafbSBarry Smith - t4 - type of fourth memory elements 633d382aafbSBarry Smith 634d382aafbSBarry Smith Output Parameter: 635d382aafbSBarry Smith + r1 - memory allocated in first chunk 636d382aafbSBarry Smith . r2 - memory allocated in second chunk 637d382aafbSBarry Smith . r3 - memory allocated in third chunk 638d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 639d382aafbSBarry Smith 640d382aafbSBarry Smith Level: developer 641d382aafbSBarry Smith 642d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 643d382aafbSBarry Smith 644d382aafbSBarry Smith Concepts: memory allocation 645d382aafbSBarry Smith 646d382aafbSBarry Smith M*/ 647d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 648d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 649d382aafbSBarry Smith #else 650d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 6513b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 652d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 653d382aafbSBarry Smith #endif 654d382aafbSBarry Smith 655d382aafbSBarry Smith /*MC 656503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 657d382aafbSBarry Smith 658eca87e8dSBarry Smith Synopsis: 659eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 660eca87e8dSBarry Smith 661eca87e8dSBarry Smith Not Collective 662eca87e8dSBarry Smith 663d382aafbSBarry Smith Input Parameter: 664d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 665d382aafbSBarry Smith . t1 - type of first memory elements 666d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 667d382aafbSBarry Smith . t2 - type of second memory elements 668d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 669d382aafbSBarry Smith . t3 - type of third memory elements 670d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 671d382aafbSBarry Smith . t4 - type of fourth memory elements 672d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 673d382aafbSBarry Smith - t5 - type of fifth memory elements 674d382aafbSBarry Smith 675d382aafbSBarry Smith Output Parameter: 676d382aafbSBarry Smith + r1 - memory allocated in first chunk 677d382aafbSBarry Smith . r2 - memory allocated in second chunk 678d382aafbSBarry Smith . r3 - memory allocated in third chunk 679d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 680d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 681d382aafbSBarry Smith 682d382aafbSBarry Smith Level: developer 683d382aafbSBarry Smith 684d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 685d382aafbSBarry Smith 686d382aafbSBarry Smith Concepts: memory allocation 687d382aafbSBarry Smith 688d382aafbSBarry Smith M*/ 689d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 690d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 691d382aafbSBarry Smith #else 692d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 6933b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 694d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 695d382aafbSBarry Smith #endif 696d382aafbSBarry Smith 697d382aafbSBarry Smith 698d382aafbSBarry Smith /*MC 699503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 700d382aafbSBarry Smith 701eca87e8dSBarry Smith Synopsis: 702eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 703eca87e8dSBarry Smith 704eca87e8dSBarry Smith Not Collective 705eca87e8dSBarry Smith 706d382aafbSBarry Smith Input Parameter: 707d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 708d382aafbSBarry Smith . t1 - type of first memory elements 709d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 710d382aafbSBarry Smith . t2 - type of second memory elements 711d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 712d382aafbSBarry Smith . t3 - type of third memory elements 713d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 714d382aafbSBarry Smith . t4 - type of fourth memory elements 715d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 716d382aafbSBarry Smith . t5 - type of fifth memory elements 717d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 718d382aafbSBarry Smith - t6 - type of sixth memory elements 719d382aafbSBarry Smith 720d382aafbSBarry Smith Output Parameter: 721d382aafbSBarry Smith + r1 - memory allocated in first chunk 722d382aafbSBarry Smith . r2 - memory allocated in second chunk 723d382aafbSBarry Smith . r3 - memory allocated in third chunk 724d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 725d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 726d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 727d382aafbSBarry Smith 728d382aafbSBarry Smith Level: developer 729d382aafbSBarry Smith 730d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 731d382aafbSBarry Smith 732d382aafbSBarry Smith Concepts: memory allocation 733d382aafbSBarry Smith 734d382aafbSBarry Smith M*/ 735d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 736d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 737d382aafbSBarry Smith #else 738d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 7393b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 740d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 741d382aafbSBarry Smith #endif 742d382aafbSBarry Smith 743d382aafbSBarry Smith /*MC 744503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 745d382aafbSBarry Smith 746eca87e8dSBarry Smith Synopsis: 747eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 748eca87e8dSBarry Smith 749eca87e8dSBarry Smith Not Collective 750eca87e8dSBarry Smith 751d382aafbSBarry Smith Input Parameter: 752d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 753d382aafbSBarry Smith . t1 - type of first memory elements 754d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 755d382aafbSBarry Smith . t2 - type of second memory elements 756d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 757d382aafbSBarry Smith . t3 - type of third memory elements 758d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 759d382aafbSBarry Smith . t4 - type of fourth memory elements 760d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 761d382aafbSBarry Smith . t5 - type of fifth memory elements 762d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 763d382aafbSBarry Smith . t6 - type of sixth memory elements 764d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 765d382aafbSBarry Smith - t7 - type of sixth memory elements 766d382aafbSBarry Smith 767d382aafbSBarry Smith Output Parameter: 768d382aafbSBarry Smith + r1 - memory allocated in first chunk 769d382aafbSBarry Smith . r2 - memory allocated in second chunk 770d382aafbSBarry Smith . r3 - memory allocated in third chunk 771d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 772d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 773d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 774eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 775d382aafbSBarry Smith 776d382aafbSBarry Smith Level: developer 777d382aafbSBarry Smith 778d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 779d382aafbSBarry Smith 780d382aafbSBarry Smith Concepts: memory allocation 781d382aafbSBarry Smith 782d382aafbSBarry Smith M*/ 783d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 784d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 785d382aafbSBarry Smith #else 786d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 7873b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 788d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 789d382aafbSBarry Smith #endif 790d382aafbSBarry Smith 791d382aafbSBarry Smith /*MC 792503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 793d382aafbSBarry Smith 794eca87e8dSBarry Smith Synopsis: 795eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 796eca87e8dSBarry Smith 797eca87e8dSBarry Smith Not Collective 798eca87e8dSBarry Smith 799d382aafbSBarry Smith Input Parameter: 800d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 801d382aafbSBarry Smith 802d382aafbSBarry Smith Output Parameter: 803d382aafbSBarry Smith . result - memory allocated 804d382aafbSBarry Smith 805d382aafbSBarry Smith Level: beginner 806d382aafbSBarry Smith 807ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 808d382aafbSBarry Smith 809d382aafbSBarry Smith Concepts: memory allocation 810d382aafbSBarry Smith 811d382aafbSBarry Smith M*/ 812d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 813ad0619ddSBarry Smith 814ad0619ddSBarry Smith /*MC 815ad0619ddSBarry Smith PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 816ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 817ad0619ddSBarry Smith 818ad0619ddSBarry Smith Synopsis: 819ad0619ddSBarry Smith PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 820ad0619ddSBarry Smith 821ad0619ddSBarry Smith Not Collective 822ad0619ddSBarry Smith 823ad0619ddSBarry Smith Input Parameter: 824ad0619ddSBarry Smith + obj - object memory is logged to 825ad0619ddSBarry Smith - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 826ad0619ddSBarry Smith 827ad0619ddSBarry Smith Output Parameter: 828ad0619ddSBarry Smith . result - memory allocated 829ad0619ddSBarry Smith 830ad0619ddSBarry Smith Level: developer 831ad0619ddSBarry Smith 832ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 833ad0619ddSBarry Smith 834ad0619ddSBarry Smith Concepts: memory allocation 835ad0619ddSBarry Smith 836ad0619ddSBarry Smith M*/ 837d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 838d382aafbSBarry Smith 839d382aafbSBarry Smith /*MC 840d382aafbSBarry Smith PetscFree - Frees memory 841d382aafbSBarry Smith 842eca87e8dSBarry Smith Synopsis: 843eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 844eca87e8dSBarry Smith 845eca87e8dSBarry Smith Not Collective 846eca87e8dSBarry Smith 847d382aafbSBarry Smith Input Parameter: 848d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 849d382aafbSBarry Smith 850d382aafbSBarry Smith Level: beginner 851d382aafbSBarry Smith 852d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 853d382aafbSBarry Smith 854d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 855d382aafbSBarry Smith 856d382aafbSBarry Smith Concepts: memory allocation 857d382aafbSBarry Smith 858d382aafbSBarry Smith M*/ 85912537b14SJed Brown #define PetscFree(a) ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0))) 860d382aafbSBarry Smith 861d382aafbSBarry Smith /*MC 862d382aafbSBarry Smith PetscFreeVoid - Frees memory 863d382aafbSBarry Smith 864d382aafbSBarry Smith Synopsis: 865d382aafbSBarry Smith void PetscFreeVoid(void *memory) 866d382aafbSBarry Smith 867eca87e8dSBarry Smith Not Collective 868eca87e8dSBarry Smith 869eca87e8dSBarry Smith Input Parameter: 870eca87e8dSBarry Smith . memory - memory to free 871eca87e8dSBarry Smith 872d382aafbSBarry Smith Level: beginner 873d382aafbSBarry Smith 874d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 875d382aafbSBarry Smith 876d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 877d382aafbSBarry Smith 878d382aafbSBarry Smith Concepts: memory allocation 879d382aafbSBarry Smith 880d382aafbSBarry Smith M*/ 8812714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 882d382aafbSBarry Smith 883d382aafbSBarry Smith 884d382aafbSBarry Smith /*MC 885d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 886d382aafbSBarry Smith 887eca87e8dSBarry Smith Synopsis: 888eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 889eca87e8dSBarry Smith 890eca87e8dSBarry Smith Not Collective 891eca87e8dSBarry Smith 892d382aafbSBarry Smith Input Parameter: 893d382aafbSBarry Smith + memory1 - memory to free 894d382aafbSBarry Smith - memory2 - 2nd memory to free 895d382aafbSBarry Smith 896d382aafbSBarry Smith Level: developer 897d382aafbSBarry Smith 898d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 899d382aafbSBarry Smith 900d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 901d382aafbSBarry Smith 902d382aafbSBarry Smith Concepts: memory allocation 903d382aafbSBarry Smith 904d382aafbSBarry Smith M*/ 905d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 906d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 907d382aafbSBarry Smith #else 90881dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 909d382aafbSBarry Smith #endif 910d382aafbSBarry Smith 911d382aafbSBarry Smith /*MC 912d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 913d382aafbSBarry Smith 914eca87e8dSBarry Smith Synopsis: 915eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 916eca87e8dSBarry Smith 917eca87e8dSBarry Smith Not Collective 918eca87e8dSBarry Smith 919d382aafbSBarry Smith Input Parameter: 920d382aafbSBarry Smith + memory1 - memory to free 921d382aafbSBarry Smith . memory2 - 2nd memory to free 922d382aafbSBarry Smith - memory3 - 3rd memory to free 923d382aafbSBarry Smith 924d382aafbSBarry Smith Level: developer 925d382aafbSBarry Smith 926d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 927d382aafbSBarry Smith 928d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 929d382aafbSBarry Smith 930d382aafbSBarry Smith Concepts: memory allocation 931d382aafbSBarry Smith 932d382aafbSBarry Smith M*/ 933d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 934d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 935d382aafbSBarry Smith #else 93681dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 937d382aafbSBarry Smith #endif 938d382aafbSBarry Smith 939d382aafbSBarry Smith /*MC 940d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 941d382aafbSBarry Smith 942eca87e8dSBarry Smith Synopsis: 943eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 944eca87e8dSBarry Smith 945eca87e8dSBarry Smith Not Collective 946eca87e8dSBarry Smith 947d382aafbSBarry Smith Input Parameter: 948d382aafbSBarry Smith + m1 - memory to free 949d382aafbSBarry Smith . m2 - 2nd memory to free 950d382aafbSBarry Smith . m3 - 3rd memory to free 951d382aafbSBarry Smith - m4 - 4th memory to free 952d382aafbSBarry Smith 953d382aafbSBarry Smith Level: developer 954d382aafbSBarry Smith 955d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 956d382aafbSBarry Smith 957d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 958d382aafbSBarry Smith 959d382aafbSBarry Smith Concepts: memory allocation 960d382aafbSBarry Smith 961d382aafbSBarry Smith M*/ 962d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 963d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 964d382aafbSBarry Smith #else 96581dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 966d382aafbSBarry Smith #endif 967d382aafbSBarry Smith 968d382aafbSBarry Smith /*MC 969d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 970d382aafbSBarry Smith 971eca87e8dSBarry Smith Synopsis: 972eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 973eca87e8dSBarry Smith 974eca87e8dSBarry Smith Not Collective 975eca87e8dSBarry Smith 976d382aafbSBarry Smith Input Parameter: 977d382aafbSBarry Smith + m1 - memory to free 978d382aafbSBarry Smith . m2 - 2nd memory to free 979d382aafbSBarry Smith . m3 - 3rd memory to free 980d382aafbSBarry Smith . m4 - 4th memory to free 981d382aafbSBarry Smith - m5 - 5th memory to free 982d382aafbSBarry Smith 983d382aafbSBarry Smith Level: developer 984d382aafbSBarry Smith 985d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 986d382aafbSBarry Smith 987d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 988d382aafbSBarry Smith 989d382aafbSBarry Smith Concepts: memory allocation 990d382aafbSBarry Smith 991d382aafbSBarry Smith M*/ 992d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 993d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 994d382aafbSBarry Smith #else 99581dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 996d382aafbSBarry Smith #endif 997d382aafbSBarry Smith 998d382aafbSBarry Smith 999d382aafbSBarry Smith /*MC 1000d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1001d382aafbSBarry Smith 1002eca87e8dSBarry Smith Synopsis: 1003eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1004eca87e8dSBarry Smith 1005eca87e8dSBarry Smith Not Collective 1006eca87e8dSBarry Smith 1007d382aafbSBarry Smith Input Parameter: 1008d382aafbSBarry Smith + m1 - memory to free 1009d382aafbSBarry Smith . m2 - 2nd memory to free 1010d382aafbSBarry Smith . m3 - 3rd memory to free 1011d382aafbSBarry Smith . m4 - 4th memory to free 1012d382aafbSBarry Smith . m5 - 5th memory to free 1013d382aafbSBarry Smith - m6 - 6th memory to free 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith Level: developer 1017d382aafbSBarry Smith 1018d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith Concepts: memory allocation 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith M*/ 1025d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1026d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1027d382aafbSBarry Smith #else 102881dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1029d382aafbSBarry Smith #endif 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith /*MC 1032d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1033d382aafbSBarry Smith 1034eca87e8dSBarry Smith Synopsis: 1035eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1036eca87e8dSBarry Smith 1037eca87e8dSBarry Smith Not Collective 1038eca87e8dSBarry Smith 1039d382aafbSBarry Smith Input Parameter: 1040d382aafbSBarry Smith + m1 - memory to free 1041d382aafbSBarry Smith . m2 - 2nd memory to free 1042d382aafbSBarry Smith . m3 - 3rd memory to free 1043d382aafbSBarry Smith . m4 - 4th memory to free 1044d382aafbSBarry Smith . m5 - 5th memory to free 1045d382aafbSBarry Smith . m6 - 6th memory to free 1046d382aafbSBarry Smith - m7 - 7th memory to free 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith 1049d382aafbSBarry Smith Level: developer 1050d382aafbSBarry Smith 1051d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1054d382aafbSBarry Smith PetscMalloc7() 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith Concepts: memory allocation 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith M*/ 1059d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1060d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1061d382aafbSBarry Smith #else 106281dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1063d382aafbSBarry Smith #endif 1064d382aafbSBarry Smith 1065014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1066014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1067014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1068014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1069d382aafbSBarry Smith 1070d382aafbSBarry Smith /* 1071a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1072a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1073a5057860SBarry Smith timing etc. 1074a5057860SBarry Smith */ 1075a5057860SBarry Smith typedef double PetscLogDouble; 1076a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1077a5057860SBarry Smith 1078a5057860SBarry Smith /* 107966d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1080d382aafbSBarry Smith */ 1081014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1082014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1083014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1084014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 1086014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]); 1087014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1089d382aafbSBarry Smith 1090d382aafbSBarry Smith /*E 1091d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1092d382aafbSBarry Smith 1093d382aafbSBarry Smith Level: beginner 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1096d382aafbSBarry Smith 1097d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1098d382aafbSBarry Smith PetscDataTypeGetSize() 1099d382aafbSBarry Smith 1100d382aafbSBarry Smith E*/ 1101d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1102*a8b45ee7SBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11} PetscDataType; 1103014dd563SJed Brown PETSC_EXTERN const char *PetscDataTypes[]; 1104d382aafbSBarry Smith 1105d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1106d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1107d382aafbSBarry Smith #else 1108ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1109d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 111059a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 111159a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1112d382aafbSBarry Smith #else 1113d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1114d382aafbSBarry Smith #endif 1115d382aafbSBarry Smith #endif 1116ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1117d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 111859a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 111959a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1120d382aafbSBarry Smith #else 1121d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1122d382aafbSBarry Smith #endif 1123d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1124d382aafbSBarry Smith 1125014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1126014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1127014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 1128d382aafbSBarry Smith 1129d382aafbSBarry Smith /* 1130d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1131d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1132d382aafbSBarry Smith functionality and/or error checking. 1133d382aafbSBarry Smith */ 1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***); 1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 115647340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11576fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith /*S 1161d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith Level: intermediate 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1166d382aafbSBarry Smith S*/ 1167d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1168d382aafbSBarry Smith 1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1172d382aafbSBarry Smith 1173d382aafbSBarry Smith /* 1174d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1175d382aafbSBarry Smith */ 1176014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op; 11772414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1178014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 11792414b3c7SJed Brown #else 11802414b3c7SJed Brown #define MPIU_SUM MPI_SUM 11812414b3c7SJed Brown #endif 11822414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128) 1183014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1184014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1185d9822059SBarry Smith #else 1186d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1187d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1188d9822059SBarry Smith #endif 1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1190d382aafbSBarry Smith 1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1193eb3f98d2SBarry Smith 1194d382aafbSBarry Smith /*S 1195d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1196d382aafbSBarry Smith 1197d382aafbSBarry Smith Level: beginner 1198d382aafbSBarry Smith 11992981ebdbSBarry Smith Note: This is the base class from which all PETSc objects are derived from. 1200d382aafbSBarry Smith 12011890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1202d382aafbSBarry Smith S*/ 1203d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith /*S 1206d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1207d382aafbSBarry Smith by string name 1208d382aafbSBarry Smith 1209d382aafbSBarry Smith Level: advanced 1210d382aafbSBarry Smith 12112981ebdbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy(), PetscOpFlist 1212d382aafbSBarry Smith S*/ 1213d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1214d382aafbSBarry Smith 1215e4d1774bSDmitry Karpeev /*S 1216e4d1774bSDmitry Karpeev PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries, 1217e4d1774bSDmitry Karpeev accessed by string op name together with string argument types. 1218e4d1774bSDmitry Karpeev 1219e4d1774bSDmitry Karpeev Level: advanced 1220e4d1774bSDmitry Karpeev 12212981ebdbSBarry Smith .seealso: PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy() 1222e4d1774bSDmitry Karpeev S*/ 1223e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList; 1224e4d1774bSDmitry Karpeev 1225d382aafbSBarry Smith /*E 1226d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1227d382aafbSBarry Smith 1228d382aafbSBarry Smith Level: beginner 1229d382aafbSBarry Smith 1230d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1231d382aafbSBarry Smith 1232d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1237d382aafbSBarry Smith 1238d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1241d382aafbSBarry Smith E*/ 1242d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith #include "petscviewer.h" 1245d382aafbSBarry Smith #include "petscoptions.h" 1246d382aafbSBarry Smith 12470700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1248014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1249014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith /* 1253d382aafbSBarry Smith Routines that get memory usage information from the OS 1254d382aafbSBarry Smith */ 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1259d382aafbSBarry Smith 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1264d382aafbSBarry Smith 1265d382aafbSBarry Smith /* 1266d382aafbSBarry Smith Initialization of PETSc 1267d382aafbSBarry Smith */ 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1278d382aafbSBarry Smith 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]); 1281d382aafbSBarry Smith 1282014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD; 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**); 1290d382aafbSBarry Smith 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith /* 1297d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12982981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1299d382aafbSBarry Smith */ 1300638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1301638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1302638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1303d382aafbSBarry Smith 1304d382aafbSBarry Smith /* 1305d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1306d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1307503cfb0cSBarry Smith 1308503cfb0cSBarry Smith Level: developer 1309503cfb0cSBarry Smith 1310503cfb0cSBarry Smith .seealso: PetscUseMethod() 1311d382aafbSBarry Smith */ 1312d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1313d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1314d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1315d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1316d382aafbSBarry Smith } 1317503cfb0cSBarry Smith 1318503cfb0cSBarry Smith /* 1319503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1320503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1321503cfb0cSBarry Smith 1322503cfb0cSBarry Smith Level: developer 1323503cfb0cSBarry Smith 1324503cfb0cSBarry Smith .seealso: PetscTryMethod() 1325503cfb0cSBarry Smith */ 1326d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1327d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1328d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1329d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1330703c66c1SJed Brown else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1331d382aafbSBarry Smith } 1332503cfb0cSBarry Smith 1333d382aafbSBarry Smith /* 1334d382aafbSBarry Smith Functions that can act on any PETSc object. 1335d382aafbSBarry Smith */ 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject); 1364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1365d382aafbSBarry Smith 1366d382aafbSBarry Smith /*MC 1367d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1368d382aafbSBarry Smith 1369eca87e8dSBarry Smith Synopsis: 1370eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1371eca87e8dSBarry Smith 1372ad4df100SBarry Smith Logically Collective on PetscObject 1373d382aafbSBarry Smith 1374d382aafbSBarry Smith Input Parameters: 1375d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1376d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1377d382aafbSBarry Smith . name - name associated with the child function 1378d382aafbSBarry Smith . fname - name of the function 1379d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1380d382aafbSBarry Smith 1381d382aafbSBarry Smith Level: advanced 1382d382aafbSBarry Smith 1383d382aafbSBarry Smith 1384d382aafbSBarry Smith Notes: 1385d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1386d382aafbSBarry Smith 1387d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1388d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1389d382aafbSBarry Smith 1390d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 139120de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1392d382aafbSBarry Smith enabled. 1393d382aafbSBarry Smith 1394d382aafbSBarry Smith Concepts: objects^composing functions 1395d382aafbSBarry Smith Concepts: composing functions 1396d382aafbSBarry Smith Concepts: functions^querying 1397d382aafbSBarry Smith Concepts: objects^querying 1398d382aafbSBarry Smith Concepts: querying objects 1399d382aafbSBarry Smith 1400d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1401d382aafbSBarry Smith M*/ 1402d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1403d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1404d382aafbSBarry Smith #else 1405d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1406d382aafbSBarry Smith #endif 1407d382aafbSBarry Smith 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1423d382aafbSBarry Smith 1424d382aafbSBarry Smith /* 1425d382aafbSBarry Smith Defines PETSc error handling. 1426d382aafbSBarry Smith */ 1427d382aafbSBarry Smith #include "petscerror.h" 1428d382aafbSBarry Smith 1429d382aafbSBarry Smith /*S 1430503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1431d382aafbSBarry Smith 14321d0fab5eSBarry Smith Level: developer 1433d382aafbSBarry Smith 14341d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 14351d0fab5eSBarry Smith 14362981ebdbSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList 1437d382aafbSBarry Smith S*/ 1438d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1439d382aafbSBarry Smith 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject); 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]); 1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *); 1446d382aafbSBarry Smith 1447d382aafbSBarry Smith /* 1448503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1449d382aafbSBarry Smith link libraries that will be loaded as needed. 1450d382aafbSBarry Smith */ 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void)); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1455d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1456d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1457d382aafbSBarry Smith #else 1458d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1459d382aafbSBarry Smith #endif 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*); 1464d382aafbSBarry Smith 146548703020SDmitry Karpeev /* 146648703020SDmitry Karpeev Multiple dispatch operation function lists. Lists of names of routines with corresponding 146748703020SDmitry Karpeev argument type names with function pointers or in dynamic link libraries that will be loaded 146848703020SDmitry Karpeev as needed. Search on the op name and argument type names. 146948703020SDmitry Karpeev */ 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer); 14742981ebdbSBarry Smith 1475d382aafbSBarry Smith /*S 1476d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1477d382aafbSBarry Smith 1478d382aafbSBarry Smith Level: advanced 1479d382aafbSBarry Smith 148020de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1481d382aafbSBarry Smith 1482d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1483d382aafbSBarry Smith S*/ 1484d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1485014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1493d382aafbSBarry Smith 1494d382aafbSBarry Smith /* 1495a5a3d712SDmitry Karpeev PetscShell support. Needs to be better documented. 149605846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 149705846914SDmitry Karpeev */ 1498a5a3d712SDmitry Karpeev #include "petscshell.h" 149905846914SDmitry Karpeev 150005846914SDmitry Karpeev /* 1501d382aafbSBarry Smith Useful utility routines 1502d382aafbSBarry Smith */ 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1509d382aafbSBarry Smith 1510503cfb0cSBarry Smith /* 1511ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1512503cfb0cSBarry Smith 1513503cfb0cSBarry Smith Notes: This is useful in cases like 1514503cfb0cSBarry Smith $ int *a; 1515ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1516ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1517503cfb0cSBarry Smith */ 1518d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1519503cfb0cSBarry Smith 1520d382aafbSBarry Smith /* 1521d382aafbSBarry Smith Defines basic graphics available from PETSc. 1522d382aafbSBarry Smith */ 1523d382aafbSBarry Smith #include "petscdraw.h" 1524d382aafbSBarry Smith 1525d382aafbSBarry Smith /* 1526d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1527d382aafbSBarry Smith */ 1528b45d2f2cSJed Brown #include "petsc-private/petscimpl.h" 1529503cfb0cSBarry Smith 1530238ccf28SShri Abhyankar 1531d382aafbSBarry Smith /*MC 1532d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1533d382aafbSBarry Smith 1534d382aafbSBarry Smith Synopsis: 1535d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1536d382aafbSBarry Smith 1537eca87e8dSBarry Smith Not Collective 1538eca87e8dSBarry Smith 1539d382aafbSBarry Smith Input Parameters: 1540d382aafbSBarry Smith . format - the usual printf() format string 1541d382aafbSBarry Smith 1542d382aafbSBarry Smith Options Database Keys: 1543d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1544d382aafbSBarry Smith (default) stderr 1545d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1546d382aafbSBarry Smith error is handled.) 1547d382aafbSBarry Smith 1548d382aafbSBarry Smith Notes: Use 1549d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1550d382aafbSBarry Smith $ error is handled.) and 1551d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1552c9a19010SBarry Smith $ of you can use your own function 1553d382aafbSBarry Smith 1554d382aafbSBarry Smith Use 1555d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1556d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1557d382aafbSBarry Smith 1558d382aafbSBarry Smith Use 1559d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1560d382aafbSBarry Smith 1561d382aafbSBarry Smith Level: developer 1562d382aafbSBarry Smith 1563d382aafbSBarry Smith Fortran Note: 1564d382aafbSBarry Smith This routine is not supported in Fortran. 1565d382aafbSBarry Smith 1566d382aafbSBarry Smith Concepts: error messages^printing 1567d382aafbSBarry Smith Concepts: printing^error messages 1568d382aafbSBarry Smith 1569c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1570d382aafbSBarry Smith M*/ 1571014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1572d382aafbSBarry Smith 1573d382aafbSBarry Smith /*MC 1574d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1575d382aafbSBarry Smith 1576d382aafbSBarry Smith Synopsis: 1577d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1578d382aafbSBarry Smith 1579eca87e8dSBarry Smith Not Collective 1580eca87e8dSBarry Smith 1581d382aafbSBarry Smith Input Parameters: 1582d382aafbSBarry Smith . format - the usual printf() format string 1583d382aafbSBarry Smith 1584d382aafbSBarry Smith Level: developer 1585d382aafbSBarry Smith 1586d382aafbSBarry Smith Fortran Note: 1587d382aafbSBarry Smith This routine is not supported in Fortran. 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith Concepts: help messages^printing 1590d382aafbSBarry Smith Concepts: printing^help messages 1591d382aafbSBarry Smith 1592d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1593d382aafbSBarry Smith M*/ 1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1595d382aafbSBarry Smith 1596fcfd50ebSBarry Smith /* 1597fcfd50ebSBarry Smith Defines PETSc profiling. 1598fcfd50ebSBarry Smith */ 1599fcfd50ebSBarry Smith #include "petsclog.h" 1600fcfd50ebSBarry Smith 1601fcfd50ebSBarry Smith /* 1602fcfd50ebSBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1603fcfd50ebSBarry Smith */ 1604fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS) 1605014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll; 1606fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1607fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1608fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1609fcfd50ebSBarry Smith #else 1610fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) 0 1611fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) 0 1612fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) 0 1613fcfd50ebSBarry Smith #endif 1614fcfd50ebSBarry Smith 1615fcfd50ebSBarry Smith /* 1616fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1617fcfd50ebSBarry Smith */ 1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1625fcfd50ebSBarry Smith 1626fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1627fcfd50ebSBarry Smith #include <stdarg.h> 1628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1631fcfd50ebSBarry Smith 1632fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE) 1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1634fcfd50ebSBarry Smith #endif 1635fcfd50ebSBarry Smith 1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1639d382aafbSBarry Smith 1640d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1642784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*); 1643d382aafbSBarry Smith #endif 1644d382aafbSBarry Smith 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1652d382aafbSBarry Smith 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1654d382aafbSBarry Smith 1655d382aafbSBarry Smith /*S 1656d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1657d382aafbSBarry Smith 1658d382aafbSBarry Smith Level: advanced 1659d382aafbSBarry Smith 1660d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1661d382aafbSBarry Smith S*/ 1662014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1663d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1669d382aafbSBarry Smith 1670d382aafbSBarry Smith /* 1671d382aafbSBarry Smith For use in debuggers 1672d382aafbSBarry Smith */ 1673014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1674014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1676014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1678d382aafbSBarry Smith 1679d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1680d382aafbSBarry Smith #include <memory.h> 1681d382aafbSBarry Smith #endif 1682d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1683d382aafbSBarry Smith #include <stdlib.h> 1684d382aafbSBarry Smith #endif 1685d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1686d382aafbSBarry Smith #include <strings.h> 1687d382aafbSBarry Smith #endif 1688d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1689d382aafbSBarry Smith #include <string.h> 1690d382aafbSBarry Smith #endif 16916c7e564aSBarry Smith 16924a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1693d382aafbSBarry Smith #include <xmmintrin.h> 1694d382aafbSBarry Smith #endif 1695d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1696d382aafbSBarry Smith #include <stdint.h> 1697d382aafbSBarry Smith #endif 1698d382aafbSBarry Smith 1699fcfd50ebSBarry Smith #undef __FUNCT__ 1700fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy" 1701d382aafbSBarry Smith /*@C 1702d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1703d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1704d382aafbSBarry Smith PetscMemmove() in that case. 1705d382aafbSBarry Smith 1706d382aafbSBarry Smith Not Collective 1707d382aafbSBarry Smith 1708d382aafbSBarry Smith Input Parameters: 1709d382aafbSBarry Smith + b - pointer to initial memory space 1710d382aafbSBarry Smith - n - length (in bytes) of space to copy 1711d382aafbSBarry Smith 1712d382aafbSBarry Smith Output Parameter: 1713d382aafbSBarry Smith . a - pointer to copy space 1714d382aafbSBarry Smith 1715d382aafbSBarry Smith Level: intermediate 1716d382aafbSBarry Smith 1717d382aafbSBarry Smith Compile Option: 1718d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1719d382aafbSBarry Smith for memory copies on double precision values. 1720d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1721d382aafbSBarry Smith for memory copies on double precision values. 1722d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1723d382aafbSBarry Smith for memory copies on double precision values. 1724d382aafbSBarry Smith 1725d382aafbSBarry Smith Note: 1726d382aafbSBarry Smith This routine is analogous to memcpy(). 1727d382aafbSBarry Smith 1728503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1729503cfb0cSBarry Smith 1730d382aafbSBarry Smith Concepts: memory^copying 1731d382aafbSBarry Smith Concepts: copying^memory 1732d382aafbSBarry Smith 1733d382aafbSBarry Smith .seealso: PetscMemmove() 1734d382aafbSBarry Smith 1735d382aafbSBarry Smith @*/ 17367087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1737d382aafbSBarry Smith { 1738d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1739d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1740d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1741a7e36092SMatthew G Knepley PetscFunctionBegin; 1742e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1743e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1744a7e36092SMatthew G Knepley #else 1745d382aafbSBarry Smith PetscFunctionBegin; 1746a7e36092SMatthew G Knepley #endif 1747d382aafbSBarry Smith if (a != b) { 1748d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1749e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1750d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1751d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1752d382aafbSBarry Smith #endif 1753d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1754d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1755d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1756d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1757d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1758d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1759d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1760d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1761d382aafbSBarry Smith #else 1762d382aafbSBarry Smith size_t i; 1763d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1764d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1765d382aafbSBarry Smith #endif 1766d382aafbSBarry Smith } else { 1767d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1768d382aafbSBarry Smith } 1769d382aafbSBarry Smith #else 1770d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1771d382aafbSBarry Smith #endif 1772d382aafbSBarry Smith } 1773d382aafbSBarry Smith PetscFunctionReturn(0); 1774d382aafbSBarry Smith } 1775d382aafbSBarry Smith 1776d382aafbSBarry Smith /*@C 1777d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1778d382aafbSBarry Smith 1779d382aafbSBarry Smith Not Collective 1780d382aafbSBarry Smith 1781d382aafbSBarry Smith Input Parameters: 1782d382aafbSBarry Smith + a - pointer to beginning memory location 1783d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1784d382aafbSBarry Smith 1785d382aafbSBarry Smith Level: intermediate 1786d382aafbSBarry Smith 1787d382aafbSBarry Smith Compile Option: 1788d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1789d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1790d382aafbSBarry Smith 1791503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1792503cfb0cSBarry Smith 1793d382aafbSBarry Smith Concepts: memory^zeroing 1794d382aafbSBarry Smith Concepts: zeroing^memory 1795d382aafbSBarry Smith 1796d382aafbSBarry Smith .seealso: PetscMemcpy() 1797d382aafbSBarry Smith @*/ 17987087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1799d382aafbSBarry Smith { 1800d382aafbSBarry Smith if (n > 0) { 1801d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1802e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1803d382aafbSBarry Smith #endif 1804d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1805d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1806d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1807d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1808d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1809d382aafbSBarry Smith } else { 1810d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1811d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1812d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1813d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1814d382aafbSBarry Smith } else { 1815d382aafbSBarry Smith #endif 1816d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1817d382aafbSBarry Smith bzero((char *)a,n); 1818d382aafbSBarry Smith #else 1819d382aafbSBarry Smith memset((char*)a,0,n); 1820d382aafbSBarry Smith #endif 1821d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1822d382aafbSBarry Smith } 1823d382aafbSBarry Smith #endif 1824d382aafbSBarry Smith } 1825d382aafbSBarry Smith return 0; 1826d382aafbSBarry Smith } 1827d382aafbSBarry Smith 1828d382aafbSBarry Smith /*MC 1829d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1830d382aafbSBarry Smith 1831eca87e8dSBarry Smith Synopsis: 1832eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1833eca87e8dSBarry Smith 1834d382aafbSBarry Smith Not Collective 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith Input Parameters: 1837d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1838d382aafbSBarry Smith . n - number of elements to fetch 1839d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 184050d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1841d382aafbSBarry Smith 1842d382aafbSBarry Smith Level: developer 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith Notes: 1845d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1846d382aafbSBarry Smith 184750d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 184850d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 184950d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 185063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 185163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 185263cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1853d382aafbSBarry Smith 1854d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1855d382aafbSBarry Smith address). 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith Concepts: memory 1858d382aafbSBarry Smith M*/ 1859d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1860d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1861d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1862d382aafbSBarry Smith } while (0) 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith /* 1865e3c5b3baSBarry Smith Allows accessing MATLAB Engine 1866d382aafbSBarry Smith */ 1867d382aafbSBarry Smith #include "petscmatlab.h" 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith /* 1870d382aafbSBarry Smith Determine if some of the kernel computation routines use 1871d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1872d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1873d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1874e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1875d382aafbSBarry Smith */ 1876d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1877d382aafbSBarry Smith 1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1880d382aafbSBarry Smith #endif 1881d382aafbSBarry Smith 18825a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18835a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1888d382aafbSBarry Smith #endif 1889d382aafbSBarry Smith 1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1896d382aafbSBarry Smith #endif 1897d382aafbSBarry Smith 1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1900d382aafbSBarry Smith #endif 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith 1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1908d382aafbSBarry Smith #endif 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1912d382aafbSBarry Smith #endif 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1916d382aafbSBarry Smith #endif 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1920d382aafbSBarry Smith #endif 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1924d382aafbSBarry Smith #endif 1925d382aafbSBarry Smith 1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1928d382aafbSBarry Smith #endif 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1931d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1932d382aafbSBarry Smith #endif 1933d382aafbSBarry Smith 1934d382aafbSBarry Smith #endif 1935d382aafbSBarry Smith 1936d382aafbSBarry Smith /* 1937d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1938d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1939d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1940d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1941d382aafbSBarry Smith ugly extern "C" {} wrappers. 1942d382aafbSBarry Smith */ 1943d382aafbSBarry Smith #if defined(__cplusplus) 1944014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC 1945d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1946d382aafbSBarry Smith #define EXTERN_C_END } 1947d382aafbSBarry Smith #else 1948014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN 1949d382aafbSBarry Smith #define EXTERN_C_BEGIN 1950d382aafbSBarry Smith #define EXTERN_C_END 1951d382aafbSBarry Smith #endif 1952d382aafbSBarry Smith 1953d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1954d382aafbSBarry Smith 1955d382aafbSBarry Smith /*MC 1956d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1957d382aafbSBarry Smith communication 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith Level: beginner 1960d382aafbSBarry Smith 1961d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1962d382aafbSBarry Smith 1963d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1964d382aafbSBarry Smith M*/ 1965d382aafbSBarry Smith 1966d382aafbSBarry Smith /*MC 1967d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 1968d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 1969d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1970d382aafbSBarry Smith 1971d382aafbSBarry Smith 1972d382aafbSBarry Smith Level: beginner 1973d382aafbSBarry Smith 1974d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1975d382aafbSBarry Smith M*/ 1976d382aafbSBarry Smith 1977d382aafbSBarry Smith /*MC 1978d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 1979d382aafbSBarry Smith 1980d382aafbSBarry Smith Level: beginner 1981d382aafbSBarry Smith 1982d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 1983d382aafbSBarry Smith M*/ 1984d382aafbSBarry Smith 1985d382aafbSBarry Smith /*MC 1986d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 1987d382aafbSBarry Smith Level: beginner 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 1990d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 1991d382aafbSBarry Smith 1992d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 1993d382aafbSBarry Smith M*/ 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith /*MC 1996d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 1997d382aafbSBarry Smith 1998d382aafbSBarry Smith Level: beginner 1999d382aafbSBarry Smith 2000d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2001d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2002d382aafbSBarry Smith 2003d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2004d382aafbSBarry Smith M*/ 2005d382aafbSBarry Smith 2006d382aafbSBarry Smith /*MC 2007d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2008d382aafbSBarry Smith 2009d382aafbSBarry Smith Level: beginner 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2012d382aafbSBarry Smith pass this value 2013d382aafbSBarry Smith 2014d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2015d382aafbSBarry Smith M*/ 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2018d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2019014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2020014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2021d382aafbSBarry Smith #else 2022d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2023d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2024d382aafbSBarry Smith #endif 2025d382aafbSBarry Smith #endif 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2030d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2031d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2032d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2033d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2034d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2035d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2036d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2037d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2040e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2041e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2042eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a) 2043eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a) 2044d382aafbSBarry Smith 2045d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2046e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2047eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a) 2048d382aafbSBarry Smith #else 2049d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2050d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2051d382aafbSBarry Smith #endif 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith #else 2054d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2055d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2056d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2057d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2058d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2059d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2060d382aafbSBarry Smith #endif 2061d382aafbSBarry Smith 2062d382aafbSBarry Smith /* 20632981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2064d382aafbSBarry Smith */ 2065d382aafbSBarry Smith #if defined(hz) 2066d382aafbSBarry Smith #undef hz 2067d382aafbSBarry Smith #endif 2068d382aafbSBarry Smith 2069d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2070d382aafbSBarry Smith 2071d382aafbSBarry Smith 2072d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2073d382aafbSBarry Smith #include <limits.h> 2074d382aafbSBarry Smith #endif 2075d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2076d382aafbSBarry Smith #include <sys/param.h> 2077d382aafbSBarry Smith #endif 2078d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2079d382aafbSBarry Smith #include <sys/types.h> 2080d382aafbSBarry Smith #endif 2081d382aafbSBarry Smith #if defined(MAXPATHLEN) 2082d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2083d382aafbSBarry Smith #elif defined(MAX_PATH) 2084d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2085d382aafbSBarry Smith #elif defined(_MAX_PATH) 2086d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2087d382aafbSBarry Smith #else 2088d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2089d382aafbSBarry Smith #endif 2090d382aafbSBarry Smith 2091d382aafbSBarry Smith /* Special support for C++ */ 2092d382aafbSBarry Smith #include "petscsys.hh" 20936c7e564aSBarry Smith 2094d382aafbSBarry Smith /*MC 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith $ 1) classic Fortran 77 style 2099d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2100d382aafbSBarry Smith $ XXX variablename 2101d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2102d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2103d382aafbSBarry Smith $ 2104d382aafbSBarry Smith $ 2) classic Fortran 90 style 2105d1716517SSatish Balay $#include "finclude/petscXXX.h" 2106d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2107d382aafbSBarry Smith $ XXX variablename 2108d382aafbSBarry Smith $ 2109d382aafbSBarry Smith $ 3) Using Fortran modules 2110d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2111d382aafbSBarry Smith $ use petscXXXX 2112d382aafbSBarry Smith $ XXX variablename 2113d382aafbSBarry Smith $ 2114d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2115d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2116d382aafbSBarry Smith $ use petscXXXX 2117d382aafbSBarry Smith $ type(XXX) variablename 2118e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2119d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2120d382aafbSBarry Smith 2121d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2122d382aafbSBarry Smith 2123d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2124d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2125d382aafbSBarry Smith $ integer variablename 2126d382aafbSBarry Smith $ 2127d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2128d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2129d382aafbSBarry Smith 2130d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2131d382aafbSBarry Smith for only a few PETSc functions. 2132d382aafbSBarry Smith 2133d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2134d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2135d382aafbSBarry Smith you cannot have something like 2136d382aafbSBarry Smith $ PetscInt row,col 2137d382aafbSBarry Smith $ PetscScalar val 2138d382aafbSBarry Smith $ ... 2139d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2140d382aafbSBarry Smith You must instead have 2141d382aafbSBarry Smith $ PetscInt row(1),col(1) 2142d382aafbSBarry Smith $ PetscScalar val(1) 2143d382aafbSBarry Smith $ ... 2144d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2145d382aafbSBarry Smith 2146d382aafbSBarry Smith 2147d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2148d382aafbSBarry Smith 2149d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2150d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2151d382aafbSBarry Smith 2152d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2153d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2154d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2155d382aafbSBarry Smith 2156d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2157e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2158d382aafbSBarry Smith 2159d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2160d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2161d382aafbSBarry Smith 2162d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2163d382aafbSBarry Smith automatically by "make allfortranstubs". 2164d382aafbSBarry Smith 2165e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2166d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2167d382aafbSBarry Smith include their predecessors 2168d382aafbSBarry Smith 2169d382aafbSBarry Smith Level: beginner 2170d382aafbSBarry Smith 2171d382aafbSBarry Smith M*/ 2172d382aafbSBarry Smith 2173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 2179d382aafbSBarry Smith 2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 2186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 2194d382aafbSBarry Smith 2195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2197d382aafbSBarry Smith 219876bdecfbSBarry Smith /*J 2199d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2200d382aafbSBarry Smith with an optional dynamic library name, for example 2201d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2202d382aafbSBarry Smith 2203d382aafbSBarry Smith Level: beginner 2204d382aafbSBarry Smith 2205e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2206d382aafbSBarry Smith with the option --download-sprng 2207d382aafbSBarry Smith 2208d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 220976bdecfbSBarry Smith J*/ 2210d382aafbSBarry Smith #define PetscRandomType char* 2211d382aafbSBarry Smith #define PETSCRAND "rand" 2212d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2213d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2214d382aafbSBarry Smith 2215d382aafbSBarry Smith /* Logging support */ 2216014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2217d382aafbSBarry Smith 2218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]); 2219d382aafbSBarry Smith 2220d382aafbSBarry Smith /*S 2221d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2222d382aafbSBarry Smith 2223d382aafbSBarry Smith Level: intermediate 2224d382aafbSBarry Smith 2225d382aafbSBarry Smith Concepts: random numbers 2226d382aafbSBarry Smith 2227d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2228d382aafbSBarry Smith S*/ 2229d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2232014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList; 2233014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled; 2234d382aafbSBarry Smith 2235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []); 2236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void); 2238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType); 2239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 2240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*); 2241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*); 2242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2243d382aafbSBarry Smith 2244d382aafbSBarry Smith /*MC 2245d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2246d382aafbSBarry Smith 2247d382aafbSBarry Smith Synopsis: 22481890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2249d382aafbSBarry Smith 2250d382aafbSBarry Smith Not Collective 2251d382aafbSBarry Smith 2252d382aafbSBarry Smith Input Parameters: 2253d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2254d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2255d382aafbSBarry Smith . func_name - The name of routine to create method context 2256d382aafbSBarry Smith - create_func - The creation routine itself 2257d382aafbSBarry Smith 2258d382aafbSBarry Smith Notes: 2259d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2260d382aafbSBarry Smith 2261d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2262d382aafbSBarry Smith 2263d382aafbSBarry Smith Sample usage: 2264d382aafbSBarry Smith .vb 2265d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2266d382aafbSBarry Smith .ve 2267d382aafbSBarry Smith 2268d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2269d382aafbSBarry Smith .vb 2270d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2271d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2272d382aafbSBarry Smith .ve 2273d382aafbSBarry Smith or at runtime via the option 2274d382aafbSBarry Smith .vb 2275d382aafbSBarry Smith -random_type my_random_name 2276d382aafbSBarry Smith .ve 2277d382aafbSBarry Smith 2278d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2279d382aafbSBarry Smith 2280d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2281d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2282d382aafbSBarry Smith 2283d382aafbSBarry Smith Level: advanced 2284d382aafbSBarry Smith 2285d382aafbSBarry Smith .keywords: PetscRandom, register 2286d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2287d382aafbSBarry Smith M*/ 2288d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2289d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2290d382aafbSBarry Smith #else 2291d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2292d382aafbSBarry Smith #endif 2293d382aafbSBarry Smith 2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2303d382aafbSBarry Smith 2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2311d382aafbSBarry Smith 2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*); 2324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int); 2325d382aafbSBarry Smith 2326d382aafbSBarry Smith /* 2327d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2328d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2329d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2330d382aafbSBarry Smith PetscBinarySeek(). 2331d382aafbSBarry Smith */ 2332d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2333d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2334d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2335d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2336d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2337d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2338d382aafbSBarry Smith 2339d382aafbSBarry Smith /*E 2340d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2341d382aafbSBarry Smith 2342d382aafbSBarry Smith Level: advanced 2343d382aafbSBarry Smith 2344d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2345d382aafbSBarry Smith E*/ 2346d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2350d382aafbSBarry Smith 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2357d382aafbSBarry Smith 2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2363d382aafbSBarry Smith 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2365d382aafbSBarry Smith 2366d382aafbSBarry Smith /*E 2367d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2368d382aafbSBarry Smith 2369d382aafbSBarry Smith Level: beginner 2370d382aafbSBarry Smith 2371d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2372d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2373d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2374d382aafbSBarry Smith E*/ 237511f088b5SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode; 2376d382aafbSBarry Smith 2377d382aafbSBarry Smith /*MC 2378d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2379d382aafbSBarry Smith 2380d382aafbSBarry Smith Level: beginner 2381d382aafbSBarry Smith 2382d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2383eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2384eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2385d382aafbSBarry Smith 2386d382aafbSBarry Smith M*/ 2387d382aafbSBarry Smith 2388d382aafbSBarry Smith /*MC 2389d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2390d382aafbSBarry Smith value into that location 2391d382aafbSBarry Smith 2392d382aafbSBarry Smith Level: beginner 2393d382aafbSBarry Smith 2394d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2395eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2396eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2397d382aafbSBarry Smith 2398d382aafbSBarry Smith M*/ 2399d382aafbSBarry Smith 2400d382aafbSBarry Smith /*MC 2401d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith Level: beginner 2404d382aafbSBarry Smith 2405d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2406d382aafbSBarry Smith 2407d382aafbSBarry Smith M*/ 2408d382aafbSBarry Smith 2409d382aafbSBarry Smith /*S 2410d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2411d382aafbSBarry Smith 2412d382aafbSBarry Smith Level: advanced 2413d382aafbSBarry Smith 2414d382aafbSBarry Smith Concepts: communicator, create 2415d382aafbSBarry Smith S*/ 2416d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2417d382aafbSBarry Smith 2418d382aafbSBarry Smith struct _n_PetscSubcomm { 2419d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2420d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2421d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2422d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2423d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2424d382aafbSBarry Smith }; 2425d382aafbSBarry Smith 2426638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2427014dd563SJed Brown PETSC_EXTERN const char *PetscSubcommTypes[]; 2428638faf0bSHong Zhang 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2434d382aafbSBarry Smith 243582a7e548SBarry Smith #include <petscctable.h> 243682a7e548SBarry Smith 24376c7e564aSBarry Smith 24389e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */ 24399e03d832SJed Brown #undef __FUNCT__ 24409e03d832SJed Brown #define __FUNCT__ "User provided function" 24419e03d832SJed Brown 2442d382aafbSBarry Smith #endif 2443