xref: /petsc/include/petscsys.h (revision a8b45ee7bb2ee42c0f5c7411f714f7ca2387e603)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
14d382aafbSBarry Smith #include "petscconf.h"
15d382aafbSBarry Smith #include "petscfix.h"
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
36e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
37d382aafbSBarry Smith */
38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
40d382aafbSBarry Smith #endif
411ec50b02SJed Brown 
421ec50b02SJed Brown #if defined(__cplusplus)
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
441ec50b02SJed Brown #else
451ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
461ec50b02SJed Brown #endif
47d382aafbSBarry Smith 
48ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
49014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
50014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
51014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
52014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
53014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
54d382aafbSBarry Smith #else
55014dd563SJed Brown #  define PETSC_DLLEXPORT
56014dd563SJed Brown #  define PETSC_DLLIMPORT
57014dd563SJed Brown #endif
58014dd563SJed Brown 
59014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
60014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
61014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
62014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
63014dd563SJed Brown #endif
64014dd563SJed Brown 
65014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
66014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
67638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
68014dd563SJed Brown #else
69014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
70638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
71d382aafbSBarry Smith #endif
72d382aafbSBarry Smith /* ========================================================================== */
73d382aafbSBarry Smith /*
74d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
75d382aafbSBarry Smith     Web page
76d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
77d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
78d382aafbSBarry Smith     src/docs/website/index.html.
79d382aafbSBarry Smith */
80d382aafbSBarry Smith #include "petscversion.h"
81301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
82d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
83301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
84d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
85301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
86d382aafbSBarry Smith #else
87301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
88301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
89d382aafbSBarry Smith #endif
90d382aafbSBarry Smith 
91d382aafbSBarry Smith /*MC
92d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
93d382aafbSBarry Smith 
94d382aafbSBarry Smith     Input Parameter:
95d382aafbSBarry Smith .   len - length of the string
96d382aafbSBarry Smith 
97d382aafbSBarry Smith     Output Parameter:
98d382aafbSBarry Smith .   version - version string
99d382aafbSBarry Smith 
100d382aafbSBarry Smith     Level: developer
101d382aafbSBarry Smith 
102d382aafbSBarry Smith     Usage:
103d382aafbSBarry Smith     char version[256];
104d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
105d382aafbSBarry Smith 
106d382aafbSBarry Smith     Fortran Note:
107d382aafbSBarry Smith     This routine is not supported in Fortran.
108d382aafbSBarry Smith 
109d382aafbSBarry Smith .seealso: PetscGetProgramName()
110d382aafbSBarry Smith 
111d382aafbSBarry Smith M*/
112d382aafbSBarry Smith 
113d382aafbSBarry Smith /* ========================================================================== */
114d382aafbSBarry Smith 
115d382aafbSBarry Smith /*
116d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
117d382aafbSBarry Smith 
118d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
119d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
120d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
121d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
122d382aafbSBarry Smith     mpicxx.h directly in their code
123d382aafbSBarry Smith */
124d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
125d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
126d382aafbSBarry Smith #include "mpi.h"
12765013866SBarry Smith 
128d382aafbSBarry Smith /*
1292981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
130d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
131d382aafbSBarry Smith */
132d382aafbSBarry Smith #include <stdio.h>
133d382aafbSBarry Smith 
134d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
135d382aafbSBarry Smith #if !defined(MPIAPI)
136d382aafbSBarry Smith #define MPIAPI
137d382aafbSBarry Smith #endif
138d382aafbSBarry Smith 
139b3506946SBarry Smith 
140d382aafbSBarry Smith /*MC
141d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
142d382aafbSBarry Smith 
143d382aafbSBarry Smith     Level: beginner
144d382aafbSBarry Smith 
145d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
146d382aafbSBarry Smith M*/
147d382aafbSBarry Smith typedef int PetscErrorCode;
148d382aafbSBarry Smith 
149d382aafbSBarry Smith /*MC
150d382aafbSBarry Smith 
151503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
152d382aafbSBarry Smith          (internal integer in the data structure used for error
1532981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1540700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
155d382aafbSBarry Smith 
156d382aafbSBarry Smith     Level: advanced
157d382aafbSBarry Smith 
1580700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
159d382aafbSBarry Smith M*/
1600700a824SBarry Smith typedef int PetscClassId;
161d382aafbSBarry Smith 
162d382aafbSBarry Smith 
163d382aafbSBarry Smith /*MC
164d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
165d382aafbSBarry Smith 
166d382aafbSBarry Smith     Level: intermediate
167d382aafbSBarry Smith 
168d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1693b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
170d382aafbSBarry Smith 
1713b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
1722981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
173d382aafbSBarry Smith 
1743b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1752981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
176d382aafbSBarry Smith 
177d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
178d382aafbSBarry Smith 
179d382aafbSBarry Smith M*/
180d382aafbSBarry Smith typedef int PetscMPIInt;
181d382aafbSBarry Smith 
182d382aafbSBarry Smith /*MC
183d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
184d382aafbSBarry Smith 
185d382aafbSBarry Smith     Level: intermediate
186d382aafbSBarry Smith 
187d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
188d382aafbSBarry Smith M*/
189d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
190d382aafbSBarry Smith 
191d382aafbSBarry Smith /*MC
192d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1933b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
194d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
195d382aafbSBarry Smith 
196d382aafbSBarry Smith    Level: intermediate
197d382aafbSBarry Smith 
198d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
199d382aafbSBarry Smith M*/
200f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
201f505b413SSatish Balay typedef long long Petsc64bitInt;
202f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
203236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
204236ed0a3SSatish Balay #else
205f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
206236ed0a3SSatish Balay #endif
207d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
208236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
209d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
210d382aafbSBarry Smith #else
211d382aafbSBarry Smith typedef int PetscInt;
212d382aafbSBarry Smith #define MPIU_INT MPI_INT
213d382aafbSBarry Smith #endif
214236ed0a3SSatish Balay 
215d382aafbSBarry Smith 
216702bc34aSSatish Balay /*MC
217702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
218702bc34aSSatish Balay 
219702bc34aSSatish Balay     Level: intermediate
220702bc34aSSatish Balay 
221702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
222702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
223702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
224702bc34aSSatish Balay 
225702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
2262981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
227702bc34aSSatish Balay 
228702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
2292981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
230702bc34aSSatish Balay 
2312981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
232702bc34aSSatish Balay      if you run ./configure with the option
233702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
2342981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
2352981ebdbSBarry Smith 
2362981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2372981ebdbSBarry Smith 
2382981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
239702bc34aSSatish Balay 
240702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
241702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
242702bc34aSSatish Balay 
243702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
244702bc34aSSatish Balay 
245702bc34aSSatish Balay M*/
246702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
247702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
248702bc34aSSatish Balay #else
249702bc34aSSatish Balay typedef int PetscBLASInt;
250702bc34aSSatish Balay #endif
251702bc34aSSatish Balay 
25258b60935SBarry Smith /*EC
25358b60935SBarry Smith 
2542981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
25558b60935SBarry Smith 
25658b60935SBarry Smith     Level: advanced
25758b60935SBarry Smith 
25858b60935SBarry Smith .seealso: PetscObjectSetPrecision()
25958b60935SBarry Smith E*/
26058b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
261014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
26258b60935SBarry Smith 
263503cfb0cSBarry Smith /*
264503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
265503cfb0cSBarry Smith */
266d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
267d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
268d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
270d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
271d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
272d382aafbSBarry Smith #else
273d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
274d382aafbSBarry Smith #endif
275d382aafbSBarry Smith 
276d382aafbSBarry Smith 
277d382aafbSBarry Smith /*
278d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
279d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
280d382aafbSBarry Smith */
281014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
282d382aafbSBarry Smith 
283d382aafbSBarry Smith /*
284d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
285d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
286d382aafbSBarry Smith */
287014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
288d382aafbSBarry Smith 
289d382aafbSBarry Smith /*MC
290d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
291d382aafbSBarry Smith 
292d382aafbSBarry Smith     Synopsis:
293ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
294d382aafbSBarry Smith 
295eca87e8dSBarry Smith     Not Collective
296eca87e8dSBarry Smith 
297d382aafbSBarry Smith     Input Parameters:
298d382aafbSBarry Smith .   cond - condition or expression
299d382aafbSBarry Smith 
300d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
301d382aafbSBarry Smith     branch is unlikely.
302d382aafbSBarry Smith 
303d382aafbSBarry Smith     Level: advanced
304d382aafbSBarry Smith 
305d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
306d382aafbSBarry Smith M*/
307d382aafbSBarry Smith 
308d382aafbSBarry Smith /*MC
309d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
310d382aafbSBarry Smith 
311d382aafbSBarry Smith     Synopsis:
312ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
313d382aafbSBarry Smith 
314eca87e8dSBarry Smith     Not Collective
315eca87e8dSBarry Smith 
316d382aafbSBarry Smith     Input Parameters:
317d382aafbSBarry Smith .   cond - condition or expression
318d382aafbSBarry Smith 
319d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
320d382aafbSBarry Smith     branch is likely.
321d382aafbSBarry Smith 
322d382aafbSBarry Smith     Level: advanced
323d382aafbSBarry Smith 
324d382aafbSBarry Smith .seealso: PetscUnlikely()
325d382aafbSBarry Smith M*/
326d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
327d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
328d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
329d382aafbSBarry Smith #else
330cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
331cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
332d382aafbSBarry Smith #endif
333d382aafbSBarry Smith 
334d382aafbSBarry Smith /*
335d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
336d382aafbSBarry Smith */
337d382aafbSBarry Smith #include "petscmath.h"
338d382aafbSBarry Smith 
339d382aafbSBarry Smith /*
340d382aafbSBarry Smith     Declare extern C stuff after including external header files
341d382aafbSBarry Smith */
342d382aafbSBarry Smith 
343d382aafbSBarry Smith 
344d382aafbSBarry Smith /*
345d382aafbSBarry Smith        Basic PETSc constants
346d382aafbSBarry Smith */
347d382aafbSBarry Smith 
348d382aafbSBarry Smith /*E
349ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
350d382aafbSBarry Smith 
351d382aafbSBarry Smith    Level: beginner
352d382aafbSBarry Smith 
353ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
35434e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
35534e82e7dSBarry Smith 
356d382aafbSBarry Smith E*/
357ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
358014dd563SJed Brown PETSC_EXTERN const char *PetscBools[];
35970b3c8c7SBarry Smith 
36070b3c8c7SBarry Smith /*E
36170b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
36270b3c8c7SBarry Smith 
36370b3c8c7SBarry Smith    Level: beginner
36470b3c8c7SBarry Smith 
36570b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
36670b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
36770b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
36870b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
36970b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
37070b3c8c7SBarry Smith 
37170b3c8c7SBarry Smith E*/
37270b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
373014dd563SJed Brown PETSC_EXTERN const char *PetscCopyModes[];
374d382aafbSBarry Smith 
375d382aafbSBarry Smith /*MC
376ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
377d382aafbSBarry Smith 
378d382aafbSBarry Smith     Level: beginner
379d382aafbSBarry Smith 
380d382aafbSBarry Smith     Note: Zero integer
381d382aafbSBarry Smith 
382ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
383d382aafbSBarry Smith M*/
384d382aafbSBarry Smith 
385d382aafbSBarry Smith /*MC
386ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
387d382aafbSBarry Smith 
388d382aafbSBarry Smith     Level: beginner
389d382aafbSBarry Smith 
390d382aafbSBarry Smith     Note: Nonzero integer
391d382aafbSBarry Smith 
392ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
393d382aafbSBarry Smith M*/
394d382aafbSBarry Smith 
395d382aafbSBarry Smith /*MC
396d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
397d382aafbSBarry Smith 
398d382aafbSBarry Smith    Level: beginner
399d382aafbSBarry Smith 
400d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
401d382aafbSBarry Smith           some default
402d382aafbSBarry Smith 
403d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
404503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
405d382aafbSBarry Smith 
40634e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
40734e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
40834e82e7dSBarry Smith 
409d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
410d382aafbSBarry Smith 
411d382aafbSBarry Smith M*/
412d382aafbSBarry Smith #define PETSC_NULL           0
413d382aafbSBarry Smith 
414d382aafbSBarry Smith /*MC
415d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
416d382aafbSBarry Smith 
417d382aafbSBarry Smith    Level: beginner
418d382aafbSBarry Smith 
419d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
420d382aafbSBarry Smith           some default
421d382aafbSBarry Smith 
422d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
423d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
424d382aafbSBarry Smith 
425d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
426d382aafbSBarry Smith 
427d382aafbSBarry Smith M*/
428d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
429d382aafbSBarry Smith 
430d382aafbSBarry Smith /*MC
431557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
432557d4da8SBarry Smith        where you wish PETSc to use the default.
433557d4da8SBarry Smith 
434557d4da8SBarry Smith    Level: beginner
435557d4da8SBarry Smith 
436557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
437557d4da8SBarry Smith 
438557d4da8SBarry Smith M*/
439557d4da8SBarry Smith #define PETSC_DECIDE  -1
440557d4da8SBarry Smith 
441557d4da8SBarry Smith /*MC
442d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
443d382aafbSBarry Smith        where you wish PETSc to compute the required value.
444d382aafbSBarry Smith 
445d382aafbSBarry Smith    Level: beginner
446d382aafbSBarry Smith 
447557d4da8SBarry Smith 
448557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
449557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
450557d4da8SBarry Smith 
451d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
452d382aafbSBarry Smith 
453d382aafbSBarry Smith M*/
454d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
455d382aafbSBarry Smith 
456d382aafbSBarry Smith /*MC
457557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
458557d4da8SBarry Smith        where you wish PETSc to use the default.
459557d4da8SBarry Smith 
460557d4da8SBarry Smith    Level: beginner
461557d4da8SBarry Smith 
462557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
463557d4da8SBarry Smith 
464557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
465557d4da8SBarry Smith 
466557d4da8SBarry Smith M*/
467557d4da8SBarry Smith #define PETSC_DEFAULT  -2
468557d4da8SBarry Smith 
469557d4da8SBarry Smith /*MC
470d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
471d382aafbSBarry Smith            all the processs that PETSc knows about.
472d382aafbSBarry Smith 
473d382aafbSBarry Smith    Level: beginner
474d382aafbSBarry Smith 
475d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
476d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
477d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
478d382aafbSBarry Smith           PetscInitialize()
479d382aafbSBarry Smith 
480d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
481d382aafbSBarry Smith 
482d382aafbSBarry Smith M*/
483014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
484d382aafbSBarry Smith 
485d382aafbSBarry Smith /*MC
486503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
487d382aafbSBarry Smith 
488d382aafbSBarry Smith    Level: beginner
489d382aafbSBarry Smith 
490d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
491d382aafbSBarry Smith 
492d382aafbSBarry Smith M*/
493d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
494d382aafbSBarry Smith 
495014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
496014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
497014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
498d382aafbSBarry Smith 
499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
502d382aafbSBarry Smith 
503d382aafbSBarry Smith /*MC
504d382aafbSBarry Smith    PetscMalloc - Allocates memory
505d382aafbSBarry Smith 
506eca87e8dSBarry Smith    Synopsis:
507eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
508eca87e8dSBarry Smith 
509eca87e8dSBarry Smith    Not Collective
510eca87e8dSBarry Smith 
511d382aafbSBarry Smith    Input Parameter:
512d382aafbSBarry Smith .  m - number of bytes to allocate
513d382aafbSBarry Smith 
514d382aafbSBarry Smith    Output Parameter:
515d382aafbSBarry Smith .  result - memory allocated
516d382aafbSBarry Smith 
517d382aafbSBarry Smith    Level: beginner
518d382aafbSBarry Smith 
519d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
520d382aafbSBarry Smith 
521d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
522d382aafbSBarry Smith           properly handle not freeing the null pointer.
523d382aafbSBarry Smith 
524d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
525d382aafbSBarry Smith 
526d382aafbSBarry Smith   Concepts: memory allocation
527d382aafbSBarry Smith 
528d382aafbSBarry Smith M*/
5292714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
530d382aafbSBarry Smith 
531d382aafbSBarry Smith /*MC
532503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
533d382aafbSBarry Smith 
534d382aafbSBarry Smith    Synopsis:
535d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
536d382aafbSBarry Smith 
537eca87e8dSBarry Smith    Not Collective
538eca87e8dSBarry Smith 
539eca87e8dSBarry Smith    Input Parameters:
540eca87e8dSBarry Smith .  addr - address to align (any pointer type)
541eca87e8dSBarry Smith 
542d382aafbSBarry Smith    Level: developer
543d382aafbSBarry Smith 
544d382aafbSBarry Smith .seealso: PetscMallocAlign()
545d382aafbSBarry Smith 
546d382aafbSBarry Smith   Concepts: memory allocation
547d382aafbSBarry Smith M*/
548d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
549d382aafbSBarry Smith 
550d382aafbSBarry Smith /*MC
551503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
552d382aafbSBarry Smith 
553eca87e8dSBarry Smith    Synopsis:
554eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
555eca87e8dSBarry Smith 
556eca87e8dSBarry Smith    Not Collective
557eca87e8dSBarry Smith 
558d382aafbSBarry Smith    Input Parameter:
559d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
560d382aafbSBarry Smith .  t1 - type of first memory elements
561d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
562d382aafbSBarry Smith -  t2 - type of second memory elements
563d382aafbSBarry Smith 
564d382aafbSBarry Smith    Output Parameter:
565d382aafbSBarry Smith +  r1 - memory allocated in first chunk
566d382aafbSBarry Smith -  r2 - memory allocated in second chunk
567d382aafbSBarry Smith 
568d382aafbSBarry Smith    Level: developer
569d382aafbSBarry Smith 
570d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
571d382aafbSBarry Smith 
572d382aafbSBarry Smith   Concepts: memory allocation
573d382aafbSBarry Smith 
574d382aafbSBarry Smith M*/
575d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
576d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
577d382aafbSBarry Smith #else
5782981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
579d382aafbSBarry Smith #endif
580d382aafbSBarry Smith 
581d382aafbSBarry Smith /*MC
582503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
583d382aafbSBarry Smith 
584eca87e8dSBarry Smith    Synopsis:
585eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
586eca87e8dSBarry Smith 
587eca87e8dSBarry Smith    Not Collective
588eca87e8dSBarry Smith 
589d382aafbSBarry Smith    Input Parameter:
590d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
591d382aafbSBarry Smith .  t1 - type of first memory elements
592d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
593d382aafbSBarry Smith .  t2 - type of second memory elements
594d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
595d382aafbSBarry Smith -  t3 - type of third memory elements
596d382aafbSBarry Smith 
597d382aafbSBarry Smith    Output Parameter:
598d382aafbSBarry Smith +  r1 - memory allocated in first chunk
599d382aafbSBarry Smith .  r2 - memory allocated in second chunk
600d382aafbSBarry Smith -  r3 - memory allocated in third chunk
601d382aafbSBarry Smith 
602d382aafbSBarry Smith    Level: developer
603d382aafbSBarry Smith 
604d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
605d382aafbSBarry Smith 
606d382aafbSBarry Smith   Concepts: memory allocation
607d382aafbSBarry Smith 
608d382aafbSBarry Smith M*/
609d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
610d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
611d382aafbSBarry Smith #else
6123b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
613d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
614d382aafbSBarry Smith #endif
615d382aafbSBarry Smith 
616d382aafbSBarry Smith /*MC
617503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
618d382aafbSBarry Smith 
619eca87e8dSBarry Smith    Synopsis:
620eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
621eca87e8dSBarry Smith 
622eca87e8dSBarry Smith    Not Collective
623eca87e8dSBarry Smith 
624d382aafbSBarry Smith    Input Parameter:
625d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
626d382aafbSBarry Smith .  t1 - type of first memory elements
627d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
628d382aafbSBarry Smith .  t2 - type of second memory elements
629d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
630d382aafbSBarry Smith .  t3 - type of third memory elements
631d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
632d382aafbSBarry Smith -  t4 - type of fourth memory elements
633d382aafbSBarry Smith 
634d382aafbSBarry Smith    Output Parameter:
635d382aafbSBarry Smith +  r1 - memory allocated in first chunk
636d382aafbSBarry Smith .  r2 - memory allocated in second chunk
637d382aafbSBarry Smith .  r3 - memory allocated in third chunk
638d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
639d382aafbSBarry Smith 
640d382aafbSBarry Smith    Level: developer
641d382aafbSBarry Smith 
642d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
643d382aafbSBarry Smith 
644d382aafbSBarry Smith   Concepts: memory allocation
645d382aafbSBarry Smith 
646d382aafbSBarry Smith M*/
647d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
648d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
649d382aafbSBarry Smith #else
650d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6513b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
652d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
653d382aafbSBarry Smith #endif
654d382aafbSBarry Smith 
655d382aafbSBarry Smith /*MC
656503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
657d382aafbSBarry Smith 
658eca87e8dSBarry Smith    Synopsis:
659eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
660eca87e8dSBarry Smith 
661eca87e8dSBarry Smith    Not Collective
662eca87e8dSBarry Smith 
663d382aafbSBarry Smith    Input Parameter:
664d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
665d382aafbSBarry Smith .  t1 - type of first memory elements
666d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
667d382aafbSBarry Smith .  t2 - type of second memory elements
668d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
669d382aafbSBarry Smith .  t3 - type of third memory elements
670d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
671d382aafbSBarry Smith .  t4 - type of fourth memory elements
672d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
673d382aafbSBarry Smith -  t5 - type of fifth memory elements
674d382aafbSBarry Smith 
675d382aafbSBarry Smith    Output Parameter:
676d382aafbSBarry Smith +  r1 - memory allocated in first chunk
677d382aafbSBarry Smith .  r2 - memory allocated in second chunk
678d382aafbSBarry Smith .  r3 - memory allocated in third chunk
679d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
680d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
681d382aafbSBarry Smith 
682d382aafbSBarry Smith    Level: developer
683d382aafbSBarry Smith 
684d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
685d382aafbSBarry Smith 
686d382aafbSBarry Smith   Concepts: memory allocation
687d382aafbSBarry Smith 
688d382aafbSBarry Smith M*/
689d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
690d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
691d382aafbSBarry Smith #else
692d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6933b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
694d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
695d382aafbSBarry Smith #endif
696d382aafbSBarry Smith 
697d382aafbSBarry Smith 
698d382aafbSBarry Smith /*MC
699503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
700d382aafbSBarry Smith 
701eca87e8dSBarry Smith    Synopsis:
702eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
703eca87e8dSBarry Smith 
704eca87e8dSBarry Smith    Not Collective
705eca87e8dSBarry Smith 
706d382aafbSBarry Smith    Input Parameter:
707d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
708d382aafbSBarry Smith .  t1 - type of first memory elements
709d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
710d382aafbSBarry Smith .  t2 - type of second memory elements
711d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
712d382aafbSBarry Smith .  t3 - type of third memory elements
713d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
714d382aafbSBarry Smith .  t4 - type of fourth memory elements
715d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
716d382aafbSBarry Smith .  t5 - type of fifth memory elements
717d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
718d382aafbSBarry Smith -  t6 - type of sixth memory elements
719d382aafbSBarry Smith 
720d382aafbSBarry Smith    Output Parameter:
721d382aafbSBarry Smith +  r1 - memory allocated in first chunk
722d382aafbSBarry Smith .  r2 - memory allocated in second chunk
723d382aafbSBarry Smith .  r3 - memory allocated in third chunk
724d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
725d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
726d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
727d382aafbSBarry Smith 
728d382aafbSBarry Smith    Level: developer
729d382aafbSBarry Smith 
730d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
731d382aafbSBarry Smith 
732d382aafbSBarry Smith   Concepts: memory allocation
733d382aafbSBarry Smith 
734d382aafbSBarry Smith M*/
735d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
736d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
737d382aafbSBarry Smith #else
738d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7393b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
740d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
741d382aafbSBarry Smith #endif
742d382aafbSBarry Smith 
743d382aafbSBarry Smith /*MC
744503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
745d382aafbSBarry Smith 
746eca87e8dSBarry Smith    Synopsis:
747eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
748eca87e8dSBarry Smith 
749eca87e8dSBarry Smith    Not Collective
750eca87e8dSBarry Smith 
751d382aafbSBarry Smith    Input Parameter:
752d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
753d382aafbSBarry Smith .  t1 - type of first memory elements
754d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
755d382aafbSBarry Smith .  t2 - type of second memory elements
756d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
757d382aafbSBarry Smith .  t3 - type of third memory elements
758d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
759d382aafbSBarry Smith .  t4 - type of fourth memory elements
760d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
761d382aafbSBarry Smith .  t5 - type of fifth memory elements
762d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
763d382aafbSBarry Smith .  t6 - type of sixth memory elements
764d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
765d382aafbSBarry Smith -  t7 - type of sixth memory elements
766d382aafbSBarry Smith 
767d382aafbSBarry Smith    Output Parameter:
768d382aafbSBarry Smith +  r1 - memory allocated in first chunk
769d382aafbSBarry Smith .  r2 - memory allocated in second chunk
770d382aafbSBarry Smith .  r3 - memory allocated in third chunk
771d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
772d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
773d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
774eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
775d382aafbSBarry Smith 
776d382aafbSBarry Smith    Level: developer
777d382aafbSBarry Smith 
778d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
779d382aafbSBarry Smith 
780d382aafbSBarry Smith   Concepts: memory allocation
781d382aafbSBarry Smith 
782d382aafbSBarry Smith M*/
783d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
784d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
785d382aafbSBarry Smith #else
786d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7873b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
788d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
789d382aafbSBarry Smith #endif
790d382aafbSBarry Smith 
791d382aafbSBarry Smith /*MC
792503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
793d382aafbSBarry Smith 
794eca87e8dSBarry Smith    Synopsis:
795eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
796eca87e8dSBarry Smith 
797eca87e8dSBarry Smith    Not Collective
798eca87e8dSBarry Smith 
799d382aafbSBarry Smith    Input Parameter:
800d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
801d382aafbSBarry Smith 
802d382aafbSBarry Smith    Output Parameter:
803d382aafbSBarry Smith .  result - memory allocated
804d382aafbSBarry Smith 
805d382aafbSBarry Smith    Level: beginner
806d382aafbSBarry Smith 
807ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
808d382aafbSBarry Smith 
809d382aafbSBarry Smith   Concepts: memory allocation
810d382aafbSBarry Smith 
811d382aafbSBarry Smith M*/
812d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
813ad0619ddSBarry Smith 
814ad0619ddSBarry Smith /*MC
815ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
816ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
817ad0619ddSBarry Smith 
818ad0619ddSBarry Smith    Synopsis:
819ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
820ad0619ddSBarry Smith 
821ad0619ddSBarry Smith    Not Collective
822ad0619ddSBarry Smith 
823ad0619ddSBarry Smith    Input Parameter:
824ad0619ddSBarry Smith +  obj - object memory is logged to
825ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
826ad0619ddSBarry Smith 
827ad0619ddSBarry Smith    Output Parameter:
828ad0619ddSBarry Smith .  result - memory allocated
829ad0619ddSBarry Smith 
830ad0619ddSBarry Smith    Level: developer
831ad0619ddSBarry Smith 
832ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
833ad0619ddSBarry Smith 
834ad0619ddSBarry Smith   Concepts: memory allocation
835ad0619ddSBarry Smith 
836ad0619ddSBarry Smith M*/
837d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
838d382aafbSBarry Smith 
839d382aafbSBarry Smith /*MC
840d382aafbSBarry Smith    PetscFree - Frees memory
841d382aafbSBarry Smith 
842eca87e8dSBarry Smith    Synopsis:
843eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
844eca87e8dSBarry Smith 
845eca87e8dSBarry Smith    Not Collective
846eca87e8dSBarry Smith 
847d382aafbSBarry Smith    Input Parameter:
848d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
849d382aafbSBarry Smith 
850d382aafbSBarry Smith    Level: beginner
851d382aafbSBarry Smith 
852d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
853d382aafbSBarry Smith 
854d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
855d382aafbSBarry Smith 
856d382aafbSBarry Smith   Concepts: memory allocation
857d382aafbSBarry Smith 
858d382aafbSBarry Smith M*/
85912537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
860d382aafbSBarry Smith 
861d382aafbSBarry Smith /*MC
862d382aafbSBarry Smith    PetscFreeVoid - Frees memory
863d382aafbSBarry Smith 
864d382aafbSBarry Smith    Synopsis:
865d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
866d382aafbSBarry Smith 
867eca87e8dSBarry Smith    Not Collective
868eca87e8dSBarry Smith 
869eca87e8dSBarry Smith    Input Parameter:
870eca87e8dSBarry Smith .   memory - memory to free
871eca87e8dSBarry Smith 
872d382aafbSBarry Smith    Level: beginner
873d382aafbSBarry Smith 
874d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
875d382aafbSBarry Smith 
876d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
877d382aafbSBarry Smith 
878d382aafbSBarry Smith   Concepts: memory allocation
879d382aafbSBarry Smith 
880d382aafbSBarry Smith M*/
8812714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
882d382aafbSBarry Smith 
883d382aafbSBarry Smith 
884d382aafbSBarry Smith /*MC
885d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
886d382aafbSBarry Smith 
887eca87e8dSBarry Smith    Synopsis:
888eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
889eca87e8dSBarry Smith 
890eca87e8dSBarry Smith    Not Collective
891eca87e8dSBarry Smith 
892d382aafbSBarry Smith    Input Parameter:
893d382aafbSBarry Smith +   memory1 - memory to free
894d382aafbSBarry Smith -   memory2 - 2nd memory to free
895d382aafbSBarry Smith 
896d382aafbSBarry Smith    Level: developer
897d382aafbSBarry Smith 
898d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
899d382aafbSBarry Smith 
900d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
901d382aafbSBarry Smith 
902d382aafbSBarry Smith   Concepts: memory allocation
903d382aafbSBarry Smith 
904d382aafbSBarry Smith M*/
905d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
906d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
907d382aafbSBarry Smith #else
90881dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
909d382aafbSBarry Smith #endif
910d382aafbSBarry Smith 
911d382aafbSBarry Smith /*MC
912d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
913d382aafbSBarry Smith 
914eca87e8dSBarry Smith    Synopsis:
915eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
916eca87e8dSBarry Smith 
917eca87e8dSBarry Smith    Not Collective
918eca87e8dSBarry Smith 
919d382aafbSBarry Smith    Input Parameter:
920d382aafbSBarry Smith +   memory1 - memory to free
921d382aafbSBarry Smith .   memory2 - 2nd memory to free
922d382aafbSBarry Smith -   memory3 - 3rd memory to free
923d382aafbSBarry Smith 
924d382aafbSBarry Smith    Level: developer
925d382aafbSBarry Smith 
926d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
927d382aafbSBarry Smith 
928d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
929d382aafbSBarry Smith 
930d382aafbSBarry Smith   Concepts: memory allocation
931d382aafbSBarry Smith 
932d382aafbSBarry Smith M*/
933d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
934d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
935d382aafbSBarry Smith #else
93681dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
937d382aafbSBarry Smith #endif
938d382aafbSBarry Smith 
939d382aafbSBarry Smith /*MC
940d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
941d382aafbSBarry Smith 
942eca87e8dSBarry Smith    Synopsis:
943eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
944eca87e8dSBarry Smith 
945eca87e8dSBarry Smith    Not Collective
946eca87e8dSBarry Smith 
947d382aafbSBarry Smith    Input Parameter:
948d382aafbSBarry Smith +   m1 - memory to free
949d382aafbSBarry Smith .   m2 - 2nd memory to free
950d382aafbSBarry Smith .   m3 - 3rd memory to free
951d382aafbSBarry Smith -   m4 - 4th memory to free
952d382aafbSBarry Smith 
953d382aafbSBarry Smith    Level: developer
954d382aafbSBarry Smith 
955d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
956d382aafbSBarry Smith 
957d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
958d382aafbSBarry Smith 
959d382aafbSBarry Smith   Concepts: memory allocation
960d382aafbSBarry Smith 
961d382aafbSBarry Smith M*/
962d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
963d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
964d382aafbSBarry Smith #else
96581dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
966d382aafbSBarry Smith #endif
967d382aafbSBarry Smith 
968d382aafbSBarry Smith /*MC
969d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
970d382aafbSBarry Smith 
971eca87e8dSBarry Smith    Synopsis:
972eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
973eca87e8dSBarry Smith 
974eca87e8dSBarry Smith    Not Collective
975eca87e8dSBarry Smith 
976d382aafbSBarry Smith    Input Parameter:
977d382aafbSBarry Smith +   m1 - memory to free
978d382aafbSBarry Smith .   m2 - 2nd memory to free
979d382aafbSBarry Smith .   m3 - 3rd memory to free
980d382aafbSBarry Smith .   m4 - 4th memory to free
981d382aafbSBarry Smith -   m5 - 5th memory to free
982d382aafbSBarry Smith 
983d382aafbSBarry Smith    Level: developer
984d382aafbSBarry Smith 
985d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
986d382aafbSBarry Smith 
987d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
988d382aafbSBarry Smith 
989d382aafbSBarry Smith   Concepts: memory allocation
990d382aafbSBarry Smith 
991d382aafbSBarry Smith M*/
992d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
993d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
994d382aafbSBarry Smith #else
99581dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
996d382aafbSBarry Smith #endif
997d382aafbSBarry Smith 
998d382aafbSBarry Smith 
999d382aafbSBarry Smith /*MC
1000d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1001d382aafbSBarry Smith 
1002eca87e8dSBarry Smith    Synopsis:
1003eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1004eca87e8dSBarry Smith 
1005eca87e8dSBarry Smith    Not Collective
1006eca87e8dSBarry Smith 
1007d382aafbSBarry Smith    Input Parameter:
1008d382aafbSBarry Smith +   m1 - memory to free
1009d382aafbSBarry Smith .   m2 - 2nd memory to free
1010d382aafbSBarry Smith .   m3 - 3rd memory to free
1011d382aafbSBarry Smith .   m4 - 4th memory to free
1012d382aafbSBarry Smith .   m5 - 5th memory to free
1013d382aafbSBarry Smith -   m6 - 6th memory to free
1014d382aafbSBarry Smith 
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith    Level: developer
1017d382aafbSBarry Smith 
1018d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1019d382aafbSBarry Smith 
1020d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1021d382aafbSBarry Smith 
1022d382aafbSBarry Smith   Concepts: memory allocation
1023d382aafbSBarry Smith 
1024d382aafbSBarry Smith M*/
1025d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1026d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1027d382aafbSBarry Smith #else
102881dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1029d382aafbSBarry Smith #endif
1030d382aafbSBarry Smith 
1031d382aafbSBarry Smith /*MC
1032d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1033d382aafbSBarry Smith 
1034eca87e8dSBarry Smith    Synopsis:
1035eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1036eca87e8dSBarry Smith 
1037eca87e8dSBarry Smith    Not Collective
1038eca87e8dSBarry Smith 
1039d382aafbSBarry Smith    Input Parameter:
1040d382aafbSBarry Smith +   m1 - memory to free
1041d382aafbSBarry Smith .   m2 - 2nd memory to free
1042d382aafbSBarry Smith .   m3 - 3rd memory to free
1043d382aafbSBarry Smith .   m4 - 4th memory to free
1044d382aafbSBarry Smith .   m5 - 5th memory to free
1045d382aafbSBarry Smith .   m6 - 6th memory to free
1046d382aafbSBarry Smith -   m7 - 7th memory to free
1047d382aafbSBarry Smith 
1048d382aafbSBarry Smith 
1049d382aafbSBarry Smith    Level: developer
1050d382aafbSBarry Smith 
1051d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1052d382aafbSBarry Smith 
1053d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1054d382aafbSBarry Smith           PetscMalloc7()
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith   Concepts: memory allocation
1057d382aafbSBarry Smith 
1058d382aafbSBarry Smith M*/
1059d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1060d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1061d382aafbSBarry Smith #else
106281dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1063d382aafbSBarry Smith #endif
1064d382aafbSBarry Smith 
1065014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1066014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1067014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1068014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1069d382aafbSBarry Smith 
1070d382aafbSBarry Smith /*
1071a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1072a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1073a5057860SBarry Smith   timing etc.
1074a5057860SBarry Smith */
1075a5057860SBarry Smith typedef double PetscLogDouble;
1076a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1077a5057860SBarry Smith 
1078a5057860SBarry Smith /*
107966d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1080d382aafbSBarry Smith */
1081014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1082014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1083014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1084014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1086014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1087014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1089d382aafbSBarry Smith 
1090d382aafbSBarry Smith /*E
1091d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1092d382aafbSBarry Smith 
1093d382aafbSBarry Smith    Level: beginner
1094d382aafbSBarry Smith 
1095d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1096d382aafbSBarry Smith 
1097d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1098d382aafbSBarry Smith           PetscDataTypeGetSize()
1099d382aafbSBarry Smith 
1100d382aafbSBarry Smith E*/
1101d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1102*a8b45ee7SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11} PetscDataType;
1103014dd563SJed Brown PETSC_EXTERN const char *PetscDataTypes[];
1104d382aafbSBarry Smith 
1105d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1106d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1107d382aafbSBarry Smith #else
1108ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1109d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
111059a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
111159a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1112d382aafbSBarry Smith #else
1113d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1114d382aafbSBarry Smith #endif
1115d382aafbSBarry Smith #endif
1116ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1117d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
111859a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
111959a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1120d382aafbSBarry Smith #else
1121d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1122d382aafbSBarry Smith #endif
1123d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1124d382aafbSBarry Smith 
1125014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1126014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1127014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1128d382aafbSBarry Smith 
1129d382aafbSBarry Smith /*
1130d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1131d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1132d382aafbSBarry Smith    functionality and/or error checking.
1133d382aafbSBarry Smith */
1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***);
1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
115647340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11576fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1159d382aafbSBarry Smith 
1160d382aafbSBarry Smith /*S
1161d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1162d382aafbSBarry Smith 
1163d382aafbSBarry Smith   Level: intermediate
1164d382aafbSBarry Smith 
1165d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1166d382aafbSBarry Smith S*/
1167d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1168d382aafbSBarry Smith 
1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1172d382aafbSBarry Smith 
1173d382aafbSBarry Smith /*
1174d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1175d382aafbSBarry Smith */
1176014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
11772414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1178014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11792414b3c7SJed Brown #else
11802414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11812414b3c7SJed Brown #endif
11822414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1183014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1184014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1185d9822059SBarry Smith #else
1186d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1187d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1188d9822059SBarry Smith #endif
1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1190d382aafbSBarry Smith 
1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1193eb3f98d2SBarry Smith 
1194d382aafbSBarry Smith /*S
1195d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1196d382aafbSBarry Smith 
1197d382aafbSBarry Smith    Level: beginner
1198d382aafbSBarry Smith 
11992981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1200d382aafbSBarry Smith 
12011890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1202d382aafbSBarry Smith S*/
1203d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1204d382aafbSBarry Smith 
1205d382aafbSBarry Smith /*S
1206d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1207d382aafbSBarry Smith       by string name
1208d382aafbSBarry Smith 
1209d382aafbSBarry Smith    Level: advanced
1210d382aafbSBarry Smith 
12112981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1212d382aafbSBarry Smith S*/
1213d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1214d382aafbSBarry Smith 
1215e4d1774bSDmitry Karpeev /*S
1216e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1217e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1218e4d1774bSDmitry Karpeev 
1219e4d1774bSDmitry Karpeev    Level: advanced
1220e4d1774bSDmitry Karpeev 
12212981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1222e4d1774bSDmitry Karpeev S*/
1223e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1224e4d1774bSDmitry Karpeev 
1225d382aafbSBarry Smith /*E
1226d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1227d382aafbSBarry Smith 
1228d382aafbSBarry Smith   Level: beginner
1229d382aafbSBarry Smith 
1230d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1231d382aafbSBarry Smith 
1232d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1233d382aafbSBarry Smith 
1234d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1235d382aafbSBarry Smith 
1236d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1237d382aafbSBarry Smith 
1238d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1239d382aafbSBarry Smith 
1240d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1241d382aafbSBarry Smith E*/
1242d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1243d382aafbSBarry Smith 
1244d382aafbSBarry Smith #include "petscviewer.h"
1245d382aafbSBarry Smith #include "petscoptions.h"
1246d382aafbSBarry Smith 
12470700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1248014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1249014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1251d382aafbSBarry Smith 
1252d382aafbSBarry Smith /*
1253d382aafbSBarry Smith    Routines that get memory usage information from the OS
1254d382aafbSBarry Smith */
1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1259d382aafbSBarry Smith 
1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*);
1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*);
1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1264d382aafbSBarry Smith 
1265d382aafbSBarry Smith /*
1266d382aafbSBarry Smith    Initialization of PETSc
1267d382aafbSBarry Smith */
1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1278d382aafbSBarry Smith 
1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]);
1281d382aafbSBarry Smith 
1282014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1290d382aafbSBarry Smith 
1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1295d382aafbSBarry Smith 
1296d382aafbSBarry Smith /*
1297d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12982981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1299d382aafbSBarry Smith */
1300638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1301638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1302638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1303d382aafbSBarry Smith 
1304d382aafbSBarry Smith /*
1305d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1306d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1307503cfb0cSBarry Smith 
1308503cfb0cSBarry Smith    Level: developer
1309503cfb0cSBarry Smith 
1310503cfb0cSBarry Smith .seealso: PetscUseMethod()
1311d382aafbSBarry Smith */
1312d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1313d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1314d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1315d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1316d382aafbSBarry Smith   }
1317503cfb0cSBarry Smith 
1318503cfb0cSBarry Smith /*
1319503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1320503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1321503cfb0cSBarry Smith 
1322503cfb0cSBarry Smith    Level: developer
1323503cfb0cSBarry Smith 
1324503cfb0cSBarry Smith .seealso: PetscTryMethod()
1325503cfb0cSBarry Smith */
1326d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1327d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1328d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1329d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1330703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1331d382aafbSBarry Smith   }
1332503cfb0cSBarry Smith 
1333d382aafbSBarry Smith /*
1334d382aafbSBarry Smith     Functions that can act on any PETSc object.
1335d382aafbSBarry Smith */
1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1365d382aafbSBarry Smith 
1366d382aafbSBarry Smith /*MC
1367d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1368d382aafbSBarry Smith 
1369eca87e8dSBarry Smith     Synopsis:
1370eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1371eca87e8dSBarry Smith 
1372ad4df100SBarry Smith    Logically Collective on PetscObject
1373d382aafbSBarry Smith 
1374d382aafbSBarry Smith    Input Parameters:
1375d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1376d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1377d382aafbSBarry Smith .  name - name associated with the child function
1378d382aafbSBarry Smith .  fname - name of the function
1379d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1380d382aafbSBarry Smith 
1381d382aafbSBarry Smith    Level: advanced
1382d382aafbSBarry Smith 
1383d382aafbSBarry Smith 
1384d382aafbSBarry Smith    Notes:
1385d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1386d382aafbSBarry Smith 
1387d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1388d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1389d382aafbSBarry Smith 
1390d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
139120de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1392d382aafbSBarry Smith    enabled.
1393d382aafbSBarry Smith 
1394d382aafbSBarry Smith    Concepts: objects^composing functions
1395d382aafbSBarry Smith    Concepts: composing functions
1396d382aafbSBarry Smith    Concepts: functions^querying
1397d382aafbSBarry Smith    Concepts: objects^querying
1398d382aafbSBarry Smith    Concepts: querying objects
1399d382aafbSBarry Smith 
1400d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1401d382aafbSBarry Smith M*/
1402d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1403d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1404d382aafbSBarry Smith #else
1405d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1406d382aafbSBarry Smith #endif
1407d382aafbSBarry Smith 
1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject);
1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject);
1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1423d382aafbSBarry Smith 
1424d382aafbSBarry Smith /*
1425d382aafbSBarry Smith     Defines PETSc error handling.
1426d382aafbSBarry Smith */
1427d382aafbSBarry Smith #include "petscerror.h"
1428d382aafbSBarry Smith 
1429d382aafbSBarry Smith /*S
1430503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1431d382aafbSBarry Smith 
14321d0fab5eSBarry Smith    Level: developer
1433d382aafbSBarry Smith 
14341d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14351d0fab5eSBarry Smith 
14362981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1437d382aafbSBarry Smith S*/
1438d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1439d382aafbSBarry Smith 
1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*);
1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*);
1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject);
1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]);
1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *);
1446d382aafbSBarry Smith 
1447d382aafbSBarry Smith /*
1448503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1449d382aafbSBarry Smith   link libraries that will be loaded as needed.
1450d382aafbSBarry Smith */
1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*);
1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1455d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1456d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1457d382aafbSBarry Smith #else
1458d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1459d382aafbSBarry Smith #endif
1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *);
1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer);
1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []);
1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*);
1464d382aafbSBarry Smith 
146548703020SDmitry Karpeev /*
146648703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
146748703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
146848703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
146948703020SDmitry Karpeev */
1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*);
1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer);
14742981ebdbSBarry Smith 
1475d382aafbSBarry Smith /*S
1476d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1477d382aafbSBarry Smith 
1478d382aafbSBarry Smith    Level: advanced
1479d382aafbSBarry Smith 
148020de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1481d382aafbSBarry Smith 
1482d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1483d382aafbSBarry Smith S*/
1484d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1485014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1493d382aafbSBarry Smith 
1494d382aafbSBarry Smith /*
1495a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
149605846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
149705846914SDmitry Karpeev */
1498a5a3d712SDmitry Karpeev #include "petscshell.h"
149905846914SDmitry Karpeev 
150005846914SDmitry Karpeev /*
1501d382aafbSBarry Smith      Useful utility routines
1502d382aafbSBarry Smith */
1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1509d382aafbSBarry Smith 
1510503cfb0cSBarry Smith /*
1511ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1512503cfb0cSBarry Smith 
1513503cfb0cSBarry Smith     Notes: This is useful in cases like
1514503cfb0cSBarry Smith $     int        *a;
1515ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1516ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1517503cfb0cSBarry Smith */
1518d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1519503cfb0cSBarry Smith 
1520d382aafbSBarry Smith /*
1521d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1522d382aafbSBarry Smith */
1523d382aafbSBarry Smith #include "petscdraw.h"
1524d382aafbSBarry Smith 
1525d382aafbSBarry Smith /*
1526d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1527d382aafbSBarry Smith */
1528b45d2f2cSJed Brown #include "petsc-private/petscimpl.h"
1529503cfb0cSBarry Smith 
1530238ccf28SShri Abhyankar 
1531d382aafbSBarry Smith /*MC
1532d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1533d382aafbSBarry Smith 
1534d382aafbSBarry Smith    Synopsis:
1535d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1536d382aafbSBarry Smith 
1537eca87e8dSBarry Smith     Not Collective
1538eca87e8dSBarry Smith 
1539d382aafbSBarry Smith     Input Parameters:
1540d382aafbSBarry Smith .   format - the usual printf() format string
1541d382aafbSBarry Smith 
1542d382aafbSBarry Smith    Options Database Keys:
1543d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1544d382aafbSBarry Smith          (default) stderr
1545d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1546d382aafbSBarry Smith           error is handled.)
1547d382aafbSBarry Smith 
1548d382aafbSBarry Smith    Notes: Use
1549d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1550d382aafbSBarry Smith $                        error is handled.) and
1551d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1552c9a19010SBarry Smith $        of you can use your own function
1553d382aafbSBarry Smith 
1554d382aafbSBarry Smith           Use
1555d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1556d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1557d382aafbSBarry Smith 
1558d382aafbSBarry Smith           Use
1559d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1560d382aafbSBarry Smith 
1561d382aafbSBarry Smith    Level: developer
1562d382aafbSBarry Smith 
1563d382aafbSBarry Smith     Fortran Note:
1564d382aafbSBarry Smith     This routine is not supported in Fortran.
1565d382aafbSBarry Smith 
1566d382aafbSBarry Smith     Concepts: error messages^printing
1567d382aafbSBarry Smith     Concepts: printing^error messages
1568d382aafbSBarry Smith 
1569c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1570d382aafbSBarry Smith M*/
1571014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1572d382aafbSBarry Smith 
1573d382aafbSBarry Smith /*MC
1574d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1575d382aafbSBarry Smith 
1576d382aafbSBarry Smith    Synopsis:
1577d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1578d382aafbSBarry Smith 
1579eca87e8dSBarry Smith     Not Collective
1580eca87e8dSBarry Smith 
1581d382aafbSBarry Smith     Input Parameters:
1582d382aafbSBarry Smith .   format - the usual printf() format string
1583d382aafbSBarry Smith 
1584d382aafbSBarry Smith    Level: developer
1585d382aafbSBarry Smith 
1586d382aafbSBarry Smith     Fortran Note:
1587d382aafbSBarry Smith     This routine is not supported in Fortran.
1588d382aafbSBarry Smith 
1589d382aafbSBarry Smith     Concepts: help messages^printing
1590d382aafbSBarry Smith     Concepts: printing^help messages
1591d382aafbSBarry Smith 
1592d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1593d382aafbSBarry Smith M*/
1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1595d382aafbSBarry Smith 
1596fcfd50ebSBarry Smith /*
1597fcfd50ebSBarry Smith      Defines PETSc profiling.
1598fcfd50ebSBarry Smith */
1599fcfd50ebSBarry Smith #include "petsclog.h"
1600fcfd50ebSBarry Smith 
1601fcfd50ebSBarry Smith /*
1602fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1603fcfd50ebSBarry Smith */
1604fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1605014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll;
1606fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1607fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1608fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1609fcfd50ebSBarry Smith #else
1610fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1611fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1612fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1613fcfd50ebSBarry Smith #endif
1614fcfd50ebSBarry Smith 
1615fcfd50ebSBarry Smith /*
1616fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1617fcfd50ebSBarry Smith */
1618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1625fcfd50ebSBarry Smith 
1626fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1627fcfd50ebSBarry Smith #include <stdarg.h>
1628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1631fcfd50ebSBarry Smith 
1632fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1634fcfd50ebSBarry Smith #endif
1635fcfd50ebSBarry Smith 
1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1639d382aafbSBarry Smith 
1640d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1642784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*);
1643d382aafbSBarry Smith #endif
1644d382aafbSBarry Smith 
1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1652d382aafbSBarry Smith 
1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1654d382aafbSBarry Smith 
1655d382aafbSBarry Smith /*S
1656d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1657d382aafbSBarry Smith 
1658d382aafbSBarry Smith    Level: advanced
1659d382aafbSBarry Smith 
1660d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1661d382aafbSBarry Smith S*/
1662014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1663d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1666014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1669d382aafbSBarry Smith 
1670d382aafbSBarry Smith /*
1671d382aafbSBarry Smith    For use in debuggers
1672d382aafbSBarry Smith */
1673014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1674014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1675014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1676014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1678d382aafbSBarry Smith 
1679d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1680d382aafbSBarry Smith #include <memory.h>
1681d382aafbSBarry Smith #endif
1682d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1683d382aafbSBarry Smith #include <stdlib.h>
1684d382aafbSBarry Smith #endif
1685d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1686d382aafbSBarry Smith #include <strings.h>
1687d382aafbSBarry Smith #endif
1688d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1689d382aafbSBarry Smith #include <string.h>
1690d382aafbSBarry Smith #endif
16916c7e564aSBarry Smith 
16924a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1693d382aafbSBarry Smith #include <xmmintrin.h>
1694d382aafbSBarry Smith #endif
1695d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1696d382aafbSBarry Smith #include <stdint.h>
1697d382aafbSBarry Smith #endif
1698d382aafbSBarry Smith 
1699fcfd50ebSBarry Smith #undef __FUNCT__
1700fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1701d382aafbSBarry Smith /*@C
1702d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1703d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1704d382aafbSBarry Smith    PetscMemmove() in that case.
1705d382aafbSBarry Smith 
1706d382aafbSBarry Smith    Not Collective
1707d382aafbSBarry Smith 
1708d382aafbSBarry Smith    Input Parameters:
1709d382aafbSBarry Smith +  b - pointer to initial memory space
1710d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1711d382aafbSBarry Smith 
1712d382aafbSBarry Smith    Output Parameter:
1713d382aafbSBarry Smith .  a - pointer to copy space
1714d382aafbSBarry Smith 
1715d382aafbSBarry Smith    Level: intermediate
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith    Compile Option:
1718d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1719d382aafbSBarry Smith                                   for memory copies on double precision values.
1720d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1721d382aafbSBarry Smith                                   for memory copies on double precision values.
1722d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1723d382aafbSBarry Smith                                   for memory copies on double precision values.
1724d382aafbSBarry Smith 
1725d382aafbSBarry Smith    Note:
1726d382aafbSBarry Smith    This routine is analogous to memcpy().
1727d382aafbSBarry Smith 
1728503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1729503cfb0cSBarry Smith 
1730d382aafbSBarry Smith   Concepts: memory^copying
1731d382aafbSBarry Smith   Concepts: copying^memory
1732d382aafbSBarry Smith 
1733d382aafbSBarry Smith .seealso: PetscMemmove()
1734d382aafbSBarry Smith 
1735d382aafbSBarry Smith @*/
17367087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1737d382aafbSBarry Smith {
1738d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1739d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1740d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1741a7e36092SMatthew G Knepley   PetscFunctionBegin;
1742e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1743e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1744a7e36092SMatthew G Knepley #else
1745d382aafbSBarry Smith   PetscFunctionBegin;
1746a7e36092SMatthew G Knepley #endif
1747d382aafbSBarry Smith   if (a != b) {
1748d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1749e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1750d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1751d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1752d382aafbSBarry Smith #endif
1753d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1754d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1755d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1756d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1757d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1758d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1759d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1760d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1761d382aafbSBarry Smith #else
1762d382aafbSBarry Smith       size_t      i;
1763d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1764d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1765d382aafbSBarry Smith #endif
1766d382aafbSBarry Smith     } else {
1767d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1768d382aafbSBarry Smith     }
1769d382aafbSBarry Smith #else
1770d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1771d382aafbSBarry Smith #endif
1772d382aafbSBarry Smith   }
1773d382aafbSBarry Smith   PetscFunctionReturn(0);
1774d382aafbSBarry Smith }
1775d382aafbSBarry Smith 
1776d382aafbSBarry Smith /*@C
1777d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1778d382aafbSBarry Smith 
1779d382aafbSBarry Smith    Not Collective
1780d382aafbSBarry Smith 
1781d382aafbSBarry Smith    Input Parameters:
1782d382aafbSBarry Smith +  a - pointer to beginning memory location
1783d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1784d382aafbSBarry Smith 
1785d382aafbSBarry Smith    Level: intermediate
1786d382aafbSBarry Smith 
1787d382aafbSBarry Smith    Compile Option:
1788d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1789d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1790d382aafbSBarry Smith 
1791503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1792503cfb0cSBarry Smith 
1793d382aafbSBarry Smith    Concepts: memory^zeroing
1794d382aafbSBarry Smith    Concepts: zeroing^memory
1795d382aafbSBarry Smith 
1796d382aafbSBarry Smith .seealso: PetscMemcpy()
1797d382aafbSBarry Smith @*/
17987087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1799d382aafbSBarry Smith {
1800d382aafbSBarry Smith   if (n > 0) {
1801d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1802e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1803d382aafbSBarry Smith #endif
1804d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1805d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1806d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1807d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1808d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1809d382aafbSBarry Smith     } else {
1810d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1811d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1812d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1813d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1814d382aafbSBarry Smith     } else {
1815d382aafbSBarry Smith #endif
1816d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1817d382aafbSBarry Smith       bzero((char *)a,n);
1818d382aafbSBarry Smith #else
1819d382aafbSBarry Smith       memset((char*)a,0,n);
1820d382aafbSBarry Smith #endif
1821d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1822d382aafbSBarry Smith     }
1823d382aafbSBarry Smith #endif
1824d382aafbSBarry Smith   }
1825d382aafbSBarry Smith   return 0;
1826d382aafbSBarry Smith }
1827d382aafbSBarry Smith 
1828d382aafbSBarry Smith /*MC
1829d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1830d382aafbSBarry Smith 
1831eca87e8dSBarry Smith    Synopsis:
1832eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1833eca87e8dSBarry Smith 
1834d382aafbSBarry Smith    Not Collective
1835d382aafbSBarry Smith 
1836d382aafbSBarry Smith    Input Parameters:
1837d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1838d382aafbSBarry Smith .  n - number of elements to fetch
1839d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
184050d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1841d382aafbSBarry Smith 
1842d382aafbSBarry Smith    Level: developer
1843d382aafbSBarry Smith 
1844d382aafbSBarry Smith    Notes:
1845d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1846d382aafbSBarry Smith 
184750d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
184850d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
184950d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
185063cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
185163cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
185263cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1853d382aafbSBarry Smith 
1854d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1855d382aafbSBarry Smith    address).
1856d382aafbSBarry Smith 
1857d382aafbSBarry Smith    Concepts: memory
1858d382aafbSBarry Smith M*/
1859d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1860d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1861d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1862d382aafbSBarry Smith   } while (0)
1863d382aafbSBarry Smith 
1864d382aafbSBarry Smith /*
1865e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1866d382aafbSBarry Smith */
1867d382aafbSBarry Smith #include "petscmatlab.h"
1868d382aafbSBarry Smith 
1869d382aafbSBarry Smith /*
1870d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1871d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1872d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1873d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1874e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1875d382aafbSBarry Smith */
1876d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1877d382aafbSBarry Smith 
1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1880d382aafbSBarry Smith #endif
1881d382aafbSBarry Smith 
18825a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18835a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1884d382aafbSBarry Smith #endif
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1888d382aafbSBarry Smith #endif
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1892d382aafbSBarry Smith #endif
1893d382aafbSBarry Smith 
1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1900d382aafbSBarry Smith #endif
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1904d382aafbSBarry Smith #endif
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1908d382aafbSBarry Smith #endif
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1912d382aafbSBarry Smith #endif
1913d382aafbSBarry Smith 
1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1916d382aafbSBarry Smith #endif
1917d382aafbSBarry Smith 
1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1920d382aafbSBarry Smith #endif
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1924d382aafbSBarry Smith #endif
1925d382aafbSBarry Smith 
1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1928d382aafbSBarry Smith #endif
1929d382aafbSBarry Smith 
1930d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1931d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1932d382aafbSBarry Smith #endif
1933d382aafbSBarry Smith 
1934d382aafbSBarry Smith #endif
1935d382aafbSBarry Smith 
1936d382aafbSBarry Smith /*
1937d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1938d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1939d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1940d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1941d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1942d382aafbSBarry Smith */
1943d382aafbSBarry Smith #if defined(__cplusplus)
1944014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC
1945d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1946d382aafbSBarry Smith #define EXTERN_C_END }
1947d382aafbSBarry Smith #else
1948014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN
1949d382aafbSBarry Smith #define EXTERN_C_BEGIN
1950d382aafbSBarry Smith #define EXTERN_C_END
1951d382aafbSBarry Smith #endif
1952d382aafbSBarry Smith 
1953d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith /*MC
1956d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1957d382aafbSBarry Smith         communication
1958d382aafbSBarry Smith 
1959d382aafbSBarry Smith    Level: beginner
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1962d382aafbSBarry Smith 
1963d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1964d382aafbSBarry Smith M*/
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith /*MC
1967d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1968d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1969d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1970d382aafbSBarry Smith 
1971d382aafbSBarry Smith 
1972d382aafbSBarry Smith    Level: beginner
1973d382aafbSBarry Smith 
1974d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1975d382aafbSBarry Smith M*/
1976d382aafbSBarry Smith 
1977d382aafbSBarry Smith /*MC
1978d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1979d382aafbSBarry Smith 
1980d382aafbSBarry Smith    Level: beginner
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1983d382aafbSBarry Smith M*/
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith /*MC
1986d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1987d382aafbSBarry Smith    Level: beginner
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1990d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1993d382aafbSBarry Smith M*/
1994d382aafbSBarry Smith 
1995d382aafbSBarry Smith /*MC
1996d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1997d382aafbSBarry Smith 
1998d382aafbSBarry Smith    Level: beginner
1999d382aafbSBarry Smith 
2000d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2001d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2004d382aafbSBarry Smith M*/
2005d382aafbSBarry Smith 
2006d382aafbSBarry Smith /*MC
2007d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2008d382aafbSBarry Smith 
2009d382aafbSBarry Smith    Level: beginner
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2012d382aafbSBarry Smith           pass this value
2013d382aafbSBarry Smith 
2014d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2015d382aafbSBarry Smith M*/
2016d382aafbSBarry Smith 
2017d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2018d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2019014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2020014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2021d382aafbSBarry Smith #else
2022d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2023d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2024d382aafbSBarry Smith #endif
2025d382aafbSBarry Smith #endif
2026d382aafbSBarry Smith 
2027d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2028d382aafbSBarry Smith 
2029d382aafbSBarry Smith /* Limit MPI to 32-bits */
2030d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2031d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2032d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2033d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2034d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2035d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2036d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2037d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2038d382aafbSBarry Smith 
2039d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2040e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2041e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2042eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2043eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2044d382aafbSBarry Smith 
2045d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2046e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2047eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2048d382aafbSBarry Smith #else
2049d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2050d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2051d382aafbSBarry Smith #endif
2052d382aafbSBarry Smith 
2053d382aafbSBarry Smith #else
2054d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2055d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2056d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2057d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2058d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2059d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2060d382aafbSBarry Smith #endif
2061d382aafbSBarry Smith 
2062d382aafbSBarry Smith /*
20632981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2064d382aafbSBarry Smith */
2065d382aafbSBarry Smith #if defined(hz)
2066d382aafbSBarry Smith #undef hz
2067d382aafbSBarry Smith #endif
2068d382aafbSBarry Smith 
2069d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2070d382aafbSBarry Smith 
2071d382aafbSBarry Smith 
2072d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2073d382aafbSBarry Smith #include <limits.h>
2074d382aafbSBarry Smith #endif
2075d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2076d382aafbSBarry Smith #include <sys/param.h>
2077d382aafbSBarry Smith #endif
2078d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2079d382aafbSBarry Smith #include <sys/types.h>
2080d382aafbSBarry Smith #endif
2081d382aafbSBarry Smith #if defined(MAXPATHLEN)
2082d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2083d382aafbSBarry Smith #elif defined(MAX_PATH)
2084d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2085d382aafbSBarry Smith #elif defined(_MAX_PATH)
2086d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2087d382aafbSBarry Smith #else
2088d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2089d382aafbSBarry Smith #endif
2090d382aafbSBarry Smith 
2091d382aafbSBarry Smith /* Special support for C++ */
2092d382aafbSBarry Smith #include "petscsys.hh"
20936c7e564aSBarry Smith 
2094d382aafbSBarry Smith /*MC
2095d382aafbSBarry Smith 
2096d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2097d382aafbSBarry Smith 
2098d382aafbSBarry Smith $    1) classic Fortran 77 style
2099d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2100d382aafbSBarry Smith $       XXX variablename
2101d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2102d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2103d382aafbSBarry Smith $
2104d382aafbSBarry Smith $    2) classic Fortran 90 style
2105d1716517SSatish Balay $#include "finclude/petscXXX.h"
2106d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2107d382aafbSBarry Smith $       XXX variablename
2108d382aafbSBarry Smith $
2109d382aafbSBarry Smith $    3) Using Fortran modules
2110d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2111d382aafbSBarry Smith $         use petscXXXX
2112d382aafbSBarry Smith $       XXX variablename
2113d382aafbSBarry Smith $
2114d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2115d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2116d382aafbSBarry Smith $         use petscXXXX
2117d382aafbSBarry Smith $       type(XXX) variablename
2118e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2119d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2120d382aafbSBarry Smith 
2121d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2122d382aafbSBarry Smith 
2123d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2124d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2125d382aafbSBarry Smith $        integer variablename
2126d382aafbSBarry Smith $
2127d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2128d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2129d382aafbSBarry Smith 
2130d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2131d382aafbSBarry Smith for only a few PETSc functions.
2132d382aafbSBarry Smith 
2133d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2134d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2135d382aafbSBarry Smith you cannot have something like
2136d382aafbSBarry Smith $      PetscInt row,col
2137d382aafbSBarry Smith $      PetscScalar val
2138d382aafbSBarry Smith $        ...
2139d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2140d382aafbSBarry Smith You must instead have
2141d382aafbSBarry Smith $      PetscInt row(1),col(1)
2142d382aafbSBarry Smith $      PetscScalar val(1)
2143d382aafbSBarry Smith $        ...
2144d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2145d382aafbSBarry Smith 
2146d382aafbSBarry Smith 
2147d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2148d382aafbSBarry Smith 
2149d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2150d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2151d382aafbSBarry Smith 
2152d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2153d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2154d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2155d382aafbSBarry Smith 
2156d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2157e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2158d382aafbSBarry Smith 
2159d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2160d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2161d382aafbSBarry Smith 
2162d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2163d382aafbSBarry Smith      automatically by "make allfortranstubs".
2164d382aafbSBarry Smith 
2165e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2166d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2167d382aafbSBarry Smith      include their predecessors
2168d382aafbSBarry Smith 
2169d382aafbSBarry Smith     Level: beginner
2170d382aafbSBarry Smith 
2171d382aafbSBarry Smith M*/
2172d382aafbSBarry Smith 
2173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
2179d382aafbSBarry Smith 
2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
2186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2194d382aafbSBarry Smith 
2195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2197d382aafbSBarry Smith 
219876bdecfbSBarry Smith /*J
2199d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2200d382aafbSBarry Smith        with an optional dynamic library name, for example
2201d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2202d382aafbSBarry Smith 
2203d382aafbSBarry Smith    Level: beginner
2204d382aafbSBarry Smith 
2205e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2206d382aafbSBarry Smith    with the option --download-sprng
2207d382aafbSBarry Smith 
2208d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
220976bdecfbSBarry Smith J*/
2210d382aafbSBarry Smith #define PetscRandomType char*
2211d382aafbSBarry Smith #define PETSCRAND       "rand"
2212d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2213d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2214d382aafbSBarry Smith 
2215d382aafbSBarry Smith /* Logging support */
2216014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2217d382aafbSBarry Smith 
2218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]);
2219d382aafbSBarry Smith 
2220d382aafbSBarry Smith /*S
2221d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2222d382aafbSBarry Smith 
2223d382aafbSBarry Smith    Level: intermediate
2224d382aafbSBarry Smith 
2225d382aafbSBarry Smith   Concepts: random numbers
2226d382aafbSBarry Smith 
2227d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2228d382aafbSBarry Smith S*/
2229d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2230d382aafbSBarry Smith 
2231d382aafbSBarry Smith /* Dynamic creation and loading functions */
2232014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList;
2233014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled;
2234d382aafbSBarry Smith 
2235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []);
2236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
2237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void);
2238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType);
2239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
2240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*);
2241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*);
2242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2243d382aafbSBarry Smith 
2244d382aafbSBarry Smith /*MC
2245d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2246d382aafbSBarry Smith 
2247d382aafbSBarry Smith   Synopsis:
22481890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2249d382aafbSBarry Smith 
2250d382aafbSBarry Smith   Not Collective
2251d382aafbSBarry Smith 
2252d382aafbSBarry Smith   Input Parameters:
2253d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2254d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2255d382aafbSBarry Smith . func_name   - The name of routine to create method context
2256d382aafbSBarry Smith - create_func - The creation routine itself
2257d382aafbSBarry Smith 
2258d382aafbSBarry Smith   Notes:
2259d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2260d382aafbSBarry Smith 
2261d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2262d382aafbSBarry Smith 
2263d382aafbSBarry Smith   Sample usage:
2264d382aafbSBarry Smith .vb
2265d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2266d382aafbSBarry Smith .ve
2267d382aafbSBarry Smith 
2268d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2269d382aafbSBarry Smith .vb
2270d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2271d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2272d382aafbSBarry Smith .ve
2273d382aafbSBarry Smith    or at runtime via the option
2274d382aafbSBarry Smith .vb
2275d382aafbSBarry Smith     -random_type my_random_name
2276d382aafbSBarry Smith .ve
2277d382aafbSBarry Smith 
2278d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2279d382aafbSBarry Smith 
2280d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2281d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2282d382aafbSBarry Smith 
2283d382aafbSBarry Smith   Level: advanced
2284d382aafbSBarry Smith 
2285d382aafbSBarry Smith .keywords: PetscRandom, register
2286d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2287d382aafbSBarry Smith M*/
2288d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2289d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2290d382aafbSBarry Smith #else
2291d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2292d382aafbSBarry Smith #endif
2293d382aafbSBarry Smith 
2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2303d382aafbSBarry Smith 
2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2311d382aafbSBarry Smith 
2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2325d382aafbSBarry Smith 
2326d382aafbSBarry Smith /*
2327d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2328d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2329d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2330d382aafbSBarry Smith   PetscBinarySeek().
2331d382aafbSBarry Smith */
2332d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2333d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2334d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2335d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2336d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2337d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2338d382aafbSBarry Smith 
2339d382aafbSBarry Smith /*E
2340d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2341d382aafbSBarry Smith 
2342d382aafbSBarry Smith   Level: advanced
2343d382aafbSBarry Smith 
2344d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2345d382aafbSBarry Smith E*/
2346d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2350d382aafbSBarry Smith 
2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2357d382aafbSBarry Smith 
2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2363d382aafbSBarry Smith 
2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2365d382aafbSBarry Smith 
2366d382aafbSBarry Smith /*E
2367d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2368d382aafbSBarry Smith 
2369d382aafbSBarry Smith   Level: beginner
2370d382aafbSBarry Smith 
2371d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2372d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2373d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2374d382aafbSBarry Smith E*/
237511f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2376d382aafbSBarry Smith 
2377d382aafbSBarry Smith /*MC
2378d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2379d382aafbSBarry Smith 
2380d382aafbSBarry Smith     Level: beginner
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2383eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2384eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2385d382aafbSBarry Smith 
2386d382aafbSBarry Smith M*/
2387d382aafbSBarry Smith 
2388d382aafbSBarry Smith /*MC
2389d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2390d382aafbSBarry Smith                 value into that location
2391d382aafbSBarry Smith 
2392d382aafbSBarry Smith     Level: beginner
2393d382aafbSBarry Smith 
2394d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2395eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2396eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2397d382aafbSBarry Smith 
2398d382aafbSBarry Smith M*/
2399d382aafbSBarry Smith 
2400d382aafbSBarry Smith /*MC
2401d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2402d382aafbSBarry Smith 
2403d382aafbSBarry Smith     Level: beginner
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2406d382aafbSBarry Smith 
2407d382aafbSBarry Smith M*/
2408d382aafbSBarry Smith 
2409d382aafbSBarry Smith /*S
2410d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2411d382aafbSBarry Smith 
2412d382aafbSBarry Smith    Level: advanced
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith    Concepts: communicator, create
2415d382aafbSBarry Smith S*/
2416d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2417d382aafbSBarry Smith 
2418d382aafbSBarry Smith struct _n_PetscSubcomm {
2419d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2420d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2421d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2422d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2423d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2424d382aafbSBarry Smith };
2425d382aafbSBarry Smith 
2426638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2427014dd563SJed Brown PETSC_EXTERN const char *PetscSubcommTypes[];
2428638faf0bSHong Zhang 
2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2434d382aafbSBarry Smith 
243582a7e548SBarry Smith #include <petscctable.h>
243682a7e548SBarry Smith 
24376c7e564aSBarry Smith 
24389e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24399e03d832SJed Brown #undef __FUNCT__
24409e03d832SJed Brown #define __FUNCT__ "User provided function"
24419e03d832SJed Brown 
2442d382aafbSBarry Smith #endif
2443