xref: /petsc/include/petscsys.h (revision b45d2f2cb7e031d9c0de5873eca80614ca7b863b)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
1673fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1773fca5a0SBarry Smith /*
1873fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
1973fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2073fca5a0SBarry Smith */
21216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2273fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2373fca5a0SBarry Smith #endif
24216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2573fca5a0SBarry Smith #define _BSD_SOURCE
2673fca5a0SBarry Smith #endif
2773fca5a0SBarry Smith #endif
2873fca5a0SBarry Smith 
29d382aafbSBarry Smith /* ========================================================================== */
30d382aafbSBarry Smith /*
31d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
32e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
33d382aafbSBarry Smith */
34d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
35d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
36d382aafbSBarry Smith #endif
371ec50b02SJed Brown 
381ec50b02SJed Brown #if defined(__cplusplus)
391ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
401ec50b02SJed Brown #else
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
421ec50b02SJed Brown #endif
43d382aafbSBarry Smith 
44d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
45da861ed6SJed Brown #define PETSC_EXTERN extern "C"
46d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
47d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
48d382aafbSBarry Smith #else
49da861ed6SJed Brown #define PETSC_EXTERN extern
50d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
51d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
52d382aafbSBarry Smith #endif
53d382aafbSBarry Smith /* ========================================================================== */
54d382aafbSBarry Smith /*
55d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
56d382aafbSBarry Smith     Web page
57d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
58d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
59d382aafbSBarry Smith     src/docs/website/index.html.
60d382aafbSBarry Smith */
61d382aafbSBarry Smith #include "petscversion.h"
62301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
63d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
64301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
65d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
66301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
67d382aafbSBarry Smith #else
68301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
69301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
70d382aafbSBarry Smith #endif
71d382aafbSBarry Smith 
72d382aafbSBarry Smith /*MC
73d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
74d382aafbSBarry Smith 
75d382aafbSBarry Smith     Input Parameter:
76d382aafbSBarry Smith .   len - length of the string
77d382aafbSBarry Smith 
78d382aafbSBarry Smith     Output Parameter:
79d382aafbSBarry Smith .   version - version string
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     Level: developer
82d382aafbSBarry Smith 
83d382aafbSBarry Smith     Usage:
84d382aafbSBarry Smith     char version[256];
85d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
86d382aafbSBarry Smith 
87d382aafbSBarry Smith     Fortran Note:
88d382aafbSBarry Smith     This routine is not supported in Fortran.
89d382aafbSBarry Smith 
90d382aafbSBarry Smith .seealso: PetscGetProgramName()
91d382aafbSBarry Smith 
92d382aafbSBarry Smith M*/
93d382aafbSBarry Smith 
94d382aafbSBarry Smith /* ========================================================================== */
95d382aafbSBarry Smith 
96d382aafbSBarry Smith /*
97d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
98d382aafbSBarry Smith 
99d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
100d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
101d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
102d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
103d382aafbSBarry Smith     mpicxx.h directly in their code
104d382aafbSBarry Smith */
105d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
106d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
107d382aafbSBarry Smith #include "mpi.h"
10865013866SBarry Smith 
109d382aafbSBarry Smith /*
110d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
111d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
112d382aafbSBarry Smith 
113d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
114d382aafbSBarry Smith */
115d382aafbSBarry Smith #include <stdio.h>
116d382aafbSBarry Smith 
117d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
118d382aafbSBarry Smith #if !defined(MPIAPI)
119d382aafbSBarry Smith #define MPIAPI
120d382aafbSBarry Smith #endif
121d382aafbSBarry Smith 
122b3506946SBarry Smith 
123d382aafbSBarry Smith /*MC
124d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
125d382aafbSBarry Smith 
126d382aafbSBarry Smith     Level: beginner
127d382aafbSBarry Smith 
128d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
129d382aafbSBarry Smith M*/
130d382aafbSBarry Smith typedef int PetscErrorCode;
131d382aafbSBarry Smith 
132d382aafbSBarry Smith /*MC
133d382aafbSBarry Smith 
134503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
135d382aafbSBarry Smith          (internal integer in the data structure used for error
136d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1370700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
138d382aafbSBarry Smith 
139d382aafbSBarry Smith     Level: advanced
140d382aafbSBarry Smith 
1410700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
142d382aafbSBarry Smith M*/
1430700a824SBarry Smith typedef int PetscClassId;
144d382aafbSBarry Smith 
145d382aafbSBarry Smith 
146d382aafbSBarry Smith /*MC
147d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
148d382aafbSBarry Smith 
149d382aafbSBarry Smith     Level: intermediate
150d382aafbSBarry Smith 
151d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1523b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
153287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1543b2a8c54SBarry Smith 
1553b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1563b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1573b2a8c54SBarry Smith 
1583b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1593b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
160d382aafbSBarry Smith 
161287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
162287e6e24SBarry Smith      if you run ./configure with the option
163287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
164287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
165287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
166287e6e24SBarry Smith 
167287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
168287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
169287e6e24SBarry Smith 
170d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
171d382aafbSBarry Smith 
172d382aafbSBarry Smith M*/
173d382aafbSBarry Smith typedef int PetscBLASInt;
174d382aafbSBarry Smith 
175d382aafbSBarry Smith /*MC
176d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
177d382aafbSBarry Smith 
178d382aafbSBarry Smith     Level: intermediate
179d382aafbSBarry Smith 
180d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1813b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
182d382aafbSBarry Smith 
1833b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
184d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
185d382aafbSBarry Smith 
1863b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
187d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
188d382aafbSBarry Smith 
189d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
190d382aafbSBarry Smith 
191d382aafbSBarry Smith M*/
192d382aafbSBarry Smith typedef int PetscMPIInt;
193d382aafbSBarry Smith 
194d382aafbSBarry Smith /*MC
195d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
196d382aafbSBarry Smith 
197d382aafbSBarry Smith     Level: intermediate
198d382aafbSBarry Smith 
199d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
200d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
201d382aafbSBarry Smith 
202d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
203d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
204d382aafbSBarry Smith 
205d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
206d382aafbSBarry Smith M*/
207d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
208d382aafbSBarry Smith 
209d382aafbSBarry Smith /*MC
210d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2113b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
212d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
213d382aafbSBarry Smith 
214d382aafbSBarry Smith    Level: intermediate
215d382aafbSBarry Smith 
216d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
217d382aafbSBarry Smith M*/
218f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
219f505b413SSatish Balay typedef long long Petsc64bitInt;
220f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
221236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
222236ed0a3SSatish Balay #else
223f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
224236ed0a3SSatish Balay #endif
225d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
226236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
227d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
228d382aafbSBarry Smith #else
229d382aafbSBarry Smith typedef int PetscInt;
230d382aafbSBarry Smith #define MPIU_INT MPI_INT
231d382aafbSBarry Smith #endif
232236ed0a3SSatish Balay 
233d382aafbSBarry Smith 
23458b60935SBarry Smith /*EC
23558b60935SBarry Smith 
23658b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
23758b60935SBarry Smith 
23858b60935SBarry Smith     Level: advanced
23958b60935SBarry Smith 
24058b60935SBarry Smith .seealso: PetscObjectSetPrecision()
24158b60935SBarry Smith E*/
24258b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
24358b60935SBarry Smith extern const char *PetscPrecisions[];
24458b60935SBarry Smith 
24558b60935SBarry Smith 
246503cfb0cSBarry Smith /*
247503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
248503cfb0cSBarry Smith */
249d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
250d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
251d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
252d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
253d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
254d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
255d382aafbSBarry Smith #else
256d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
257d382aafbSBarry Smith #endif
258d382aafbSBarry Smith 
259d382aafbSBarry Smith 
260d382aafbSBarry Smith /*
261d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
262d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
263d382aafbSBarry Smith */
264d382aafbSBarry Smith 
265d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
266d382aafbSBarry Smith 
267d382aafbSBarry Smith /*
268d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
269d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
270d382aafbSBarry Smith */
271d382aafbSBarry Smith extern FILE* PETSC_STDERR;
272d382aafbSBarry Smith 
273d382aafbSBarry Smith /*
274d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
275d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
276d382aafbSBarry Smith */
277d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
278d382aafbSBarry Smith 
279d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
280d382aafbSBarry Smith /*MC
281d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
282d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
283d382aafbSBarry Smith 
284d382aafbSBarry Smith    Synopsis:
285d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
286d382aafbSBarry Smith 
287eca87e8dSBarry Smith      Not collective
288eca87e8dSBarry Smith 
289d382aafbSBarry Smith    Level: developer
290d382aafbSBarry Smith 
291d382aafbSBarry Smith     Example:
292d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
293d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
294d382aafbSBarry Smith 
295d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
296d382aafbSBarry Smith 
297d382aafbSBarry Smith M*/
298d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
299d382aafbSBarry Smith 
300d382aafbSBarry Smith /*MC
301d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
302d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
303d382aafbSBarry Smith 
304d382aafbSBarry Smith    Synopsis:
305d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
306d382aafbSBarry Smith 
307eca87e8dSBarry Smith    Not collective
308eca87e8dSBarry Smith 
309d382aafbSBarry Smith    Level: developer
310d382aafbSBarry Smith 
311d382aafbSBarry Smith     Example:
312d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
313d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
314d382aafbSBarry Smith 
315d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
316d382aafbSBarry Smith 
317d382aafbSBarry Smith M*/
318d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
319d382aafbSBarry Smith 
320d382aafbSBarry Smith /*MC
321d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
322d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
323d382aafbSBarry Smith             and returns the computed value (istead of an error code)
324d382aafbSBarry Smith 
325d382aafbSBarry Smith    Synopsis:
326d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
327d382aafbSBarry Smith 
328eca87e8dSBarry Smith      Not collective
329eca87e8dSBarry Smith 
330d382aafbSBarry Smith    Level: developer
331d382aafbSBarry Smith 
332d382aafbSBarry Smith     Example:
333d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
334d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
335d382aafbSBarry Smith 
336d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
337d382aafbSBarry Smith 
338d382aafbSBarry Smith M*/
339d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
340d382aafbSBarry Smith 
341d382aafbSBarry Smith #else
342d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
343d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
344d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
345d382aafbSBarry Smith #endif
346d382aafbSBarry Smith 
347d382aafbSBarry Smith /*MC
348d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
349d382aafbSBarry Smith 
350d382aafbSBarry Smith     Synopsis:
351ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
352d382aafbSBarry Smith 
353eca87e8dSBarry Smith     Not Collective
354eca87e8dSBarry Smith 
355d382aafbSBarry Smith     Input Parameters:
356d382aafbSBarry Smith .   cond - condition or expression
357d382aafbSBarry Smith 
358d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
359d382aafbSBarry Smith     branch is unlikely.
360d382aafbSBarry Smith 
361d382aafbSBarry Smith     Level: advanced
362d382aafbSBarry Smith 
363d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
364d382aafbSBarry Smith M*/
365d382aafbSBarry Smith 
366d382aafbSBarry Smith /*MC
367d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
368d382aafbSBarry Smith 
369d382aafbSBarry Smith     Synopsis:
370ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
371d382aafbSBarry Smith 
372eca87e8dSBarry Smith     Not Collective
373eca87e8dSBarry Smith 
374d382aafbSBarry Smith     Input Parameters:
375d382aafbSBarry Smith .   cond - condition or expression
376d382aafbSBarry Smith 
377d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
378d382aafbSBarry Smith     branch is likely.
379d382aafbSBarry Smith 
380d382aafbSBarry Smith     Level: advanced
381d382aafbSBarry Smith 
382d382aafbSBarry Smith .seealso: PetscUnlikely()
383d382aafbSBarry Smith M*/
384d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
385d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
386d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
387d382aafbSBarry Smith #else
388cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
389cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
390d382aafbSBarry Smith #endif
391d382aafbSBarry Smith 
392d382aafbSBarry Smith /*
393d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
394d382aafbSBarry Smith */
395d382aafbSBarry Smith #include "petscmath.h"
396d382aafbSBarry Smith 
397d382aafbSBarry Smith /*
398d382aafbSBarry Smith     Declare extern C stuff after including external header files
399d382aafbSBarry Smith */
400d382aafbSBarry Smith 
401d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
402d382aafbSBarry Smith 
403d382aafbSBarry Smith /*
404d382aafbSBarry Smith        Basic PETSc constants
405d382aafbSBarry Smith */
406d382aafbSBarry Smith 
407d382aafbSBarry Smith /*E
408ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
409d382aafbSBarry Smith 
410d382aafbSBarry Smith    Level: beginner
411d382aafbSBarry Smith 
412ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
41334e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
41434e82e7dSBarry Smith 
415d382aafbSBarry Smith E*/
416ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
417ace3abfcSBarry Smith extern const char *PetscBools[];
41870b3c8c7SBarry Smith 
41970b3c8c7SBarry Smith /*E
42070b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
42170b3c8c7SBarry Smith 
42270b3c8c7SBarry Smith    Level: beginner
42370b3c8c7SBarry Smith 
42470b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
42570b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
42670b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
42770b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
42870b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
42970b3c8c7SBarry Smith 
43070b3c8c7SBarry Smith E*/
43170b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
43270b3c8c7SBarry Smith extern const char *PetscCopyModes[];
433d382aafbSBarry Smith 
434d382aafbSBarry Smith /*MC
435ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
436d382aafbSBarry Smith 
437d382aafbSBarry Smith     Level: beginner
438d382aafbSBarry Smith 
439d382aafbSBarry Smith     Note: Zero integer
440d382aafbSBarry Smith 
441ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
442d382aafbSBarry Smith M*/
443d382aafbSBarry Smith 
444d382aafbSBarry Smith /*MC
445ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
446d382aafbSBarry Smith 
447d382aafbSBarry Smith     Level: beginner
448d382aafbSBarry Smith 
449d382aafbSBarry Smith     Note: Nonzero integer
450d382aafbSBarry Smith 
451ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
452d382aafbSBarry Smith M*/
453d382aafbSBarry Smith 
454d382aafbSBarry Smith /*MC
455d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
456d382aafbSBarry Smith 
457d382aafbSBarry Smith    Level: beginner
458d382aafbSBarry Smith 
459d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
460d382aafbSBarry Smith           some default
461d382aafbSBarry Smith 
462d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
463503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
464d382aafbSBarry Smith 
46534e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
46634e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
46734e82e7dSBarry Smith 
468d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
469d382aafbSBarry Smith 
470d382aafbSBarry Smith M*/
471d382aafbSBarry Smith #define PETSC_NULL           0
472d382aafbSBarry Smith 
473d382aafbSBarry Smith /*MC
474d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
475d382aafbSBarry Smith 
476d382aafbSBarry Smith    Level: beginner
477d382aafbSBarry Smith 
478d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
479d382aafbSBarry Smith           some default
480d382aafbSBarry Smith 
481d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
482d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
483d382aafbSBarry Smith 
484d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
485d382aafbSBarry Smith 
486d382aafbSBarry Smith M*/
487d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
488d382aafbSBarry Smith 
489d382aafbSBarry Smith /*MC
490557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
491557d4da8SBarry Smith        where you wish PETSc to use the default.
492557d4da8SBarry Smith 
493557d4da8SBarry Smith    Level: beginner
494557d4da8SBarry Smith 
495557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
496557d4da8SBarry Smith 
497557d4da8SBarry Smith M*/
498557d4da8SBarry Smith #define PETSC_DECIDE  -1
499557d4da8SBarry Smith 
500557d4da8SBarry Smith /*MC
501d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
502d382aafbSBarry Smith        where you wish PETSc to compute the required value.
503d382aafbSBarry Smith 
504d382aafbSBarry Smith    Level: beginner
505d382aafbSBarry Smith 
506557d4da8SBarry Smith 
507557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
508557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
509557d4da8SBarry Smith 
510d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
511d382aafbSBarry Smith 
512d382aafbSBarry Smith M*/
513d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
514d382aafbSBarry Smith 
515d382aafbSBarry Smith /*MC
516557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
517557d4da8SBarry Smith        where you wish PETSc to use the default.
518557d4da8SBarry Smith 
519557d4da8SBarry Smith    Level: beginner
520557d4da8SBarry Smith 
521557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
522557d4da8SBarry Smith 
523557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
524557d4da8SBarry Smith 
525557d4da8SBarry Smith M*/
526557d4da8SBarry Smith #define PETSC_DEFAULT  -2
527557d4da8SBarry Smith 
528557d4da8SBarry Smith /*MC
529d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
530d382aafbSBarry Smith            all the processs that PETSc knows about.
531d382aafbSBarry Smith 
532d382aafbSBarry Smith    Level: beginner
533d382aafbSBarry Smith 
534d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
535d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
536d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
537d382aafbSBarry Smith           PetscInitialize()
538d382aafbSBarry Smith 
539d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
540d382aafbSBarry Smith 
541d382aafbSBarry Smith M*/
542d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
543d382aafbSBarry Smith 
544d382aafbSBarry Smith /*MC
545503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
546d382aafbSBarry Smith 
547d382aafbSBarry Smith    Level: beginner
548d382aafbSBarry Smith 
549d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
550d382aafbSBarry Smith 
551d382aafbSBarry Smith M*/
552d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
553d382aafbSBarry Smith 
5547087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5557087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
5560fad1ec9SSatish Balay extern PetscBool   synchronizeCUSP;
557d382aafbSBarry Smith 
5587087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5597087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5607087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
561d382aafbSBarry Smith 
562d382aafbSBarry Smith /*MC
563d382aafbSBarry Smith    PetscMalloc - Allocates memory
564d382aafbSBarry Smith 
565eca87e8dSBarry Smith    Synopsis:
566eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
567eca87e8dSBarry Smith 
568eca87e8dSBarry Smith    Not Collective
569eca87e8dSBarry Smith 
570d382aafbSBarry Smith    Input Parameter:
571d382aafbSBarry Smith .  m - number of bytes to allocate
572d382aafbSBarry Smith 
573d382aafbSBarry Smith    Output Parameter:
574d382aafbSBarry Smith .  result - memory allocated
575d382aafbSBarry Smith 
576d382aafbSBarry Smith    Level: beginner
577d382aafbSBarry Smith 
578d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
579d382aafbSBarry Smith 
580d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
581d382aafbSBarry Smith           properly handle not freeing the null pointer.
582d382aafbSBarry Smith 
583d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
584d382aafbSBarry Smith 
585d382aafbSBarry Smith   Concepts: memory allocation
586d382aafbSBarry Smith 
587d382aafbSBarry Smith M*/
5882714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
589d382aafbSBarry Smith 
590d382aafbSBarry Smith /*MC
591503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
592d382aafbSBarry Smith 
593d382aafbSBarry Smith    Synopsis:
594d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
595d382aafbSBarry Smith 
596eca87e8dSBarry Smith    Not Collective
597eca87e8dSBarry Smith 
598eca87e8dSBarry Smith    Input Parameters:
599eca87e8dSBarry Smith .  addr - address to align (any pointer type)
600eca87e8dSBarry Smith 
601d382aafbSBarry Smith    Level: developer
602d382aafbSBarry Smith 
603d382aafbSBarry Smith .seealso: PetscMallocAlign()
604d382aafbSBarry Smith 
605d382aafbSBarry Smith   Concepts: memory allocation
606d382aafbSBarry Smith M*/
607d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
608d382aafbSBarry Smith 
609d382aafbSBarry Smith /*MC
610503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
611d382aafbSBarry Smith 
612eca87e8dSBarry Smith    Synopsis:
613eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
614eca87e8dSBarry Smith 
615eca87e8dSBarry Smith    Not Collective
616eca87e8dSBarry Smith 
617d382aafbSBarry Smith    Input Parameter:
618d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
619d382aafbSBarry Smith .  t1 - type of first memory elements
620d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
621d382aafbSBarry Smith -  t2 - type of second memory elements
622d382aafbSBarry Smith 
623d382aafbSBarry Smith    Output Parameter:
624d382aafbSBarry Smith +  r1 - memory allocated in first chunk
625d382aafbSBarry Smith -  r2 - memory allocated in second chunk
626d382aafbSBarry Smith 
627d382aafbSBarry Smith    Level: developer
628d382aafbSBarry Smith 
629d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
630d382aafbSBarry Smith 
631d382aafbSBarry Smith   Concepts: memory allocation
632d382aafbSBarry Smith 
633d382aafbSBarry Smith M*/
634d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
635d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
636d382aafbSBarry Smith #else
6373b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
638d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
639d382aafbSBarry Smith #endif
640d382aafbSBarry Smith 
641d382aafbSBarry Smith /*MC
642503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
643d382aafbSBarry Smith 
644eca87e8dSBarry Smith    Synopsis:
645eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
646eca87e8dSBarry Smith 
647eca87e8dSBarry Smith    Not Collective
648eca87e8dSBarry Smith 
649d382aafbSBarry Smith    Input Parameter:
650d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
651d382aafbSBarry Smith .  t1 - type of first memory elements
652d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
653d382aafbSBarry Smith .  t2 - type of second memory elements
654d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
655d382aafbSBarry Smith -  t3 - type of third memory elements
656d382aafbSBarry Smith 
657d382aafbSBarry Smith    Output Parameter:
658d382aafbSBarry Smith +  r1 - memory allocated in first chunk
659d382aafbSBarry Smith .  r2 - memory allocated in second chunk
660d382aafbSBarry Smith -  r3 - memory allocated in third chunk
661d382aafbSBarry Smith 
662d382aafbSBarry Smith    Level: developer
663d382aafbSBarry Smith 
664d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
665d382aafbSBarry Smith 
666d382aafbSBarry Smith   Concepts: memory allocation
667d382aafbSBarry Smith 
668d382aafbSBarry Smith M*/
669d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
670d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
671d382aafbSBarry Smith #else
6723b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
673d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
674d382aafbSBarry Smith #endif
675d382aafbSBarry Smith 
676d382aafbSBarry Smith /*MC
677503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
678d382aafbSBarry Smith 
679eca87e8dSBarry Smith    Synopsis:
680eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
681eca87e8dSBarry Smith 
682eca87e8dSBarry Smith    Not Collective
683eca87e8dSBarry Smith 
684d382aafbSBarry Smith    Input Parameter:
685d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
686d382aafbSBarry Smith .  t1 - type of first memory elements
687d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
688d382aafbSBarry Smith .  t2 - type of second memory elements
689d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
690d382aafbSBarry Smith .  t3 - type of third memory elements
691d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
692d382aafbSBarry Smith -  t4 - type of fourth memory elements
693d382aafbSBarry Smith 
694d382aafbSBarry Smith    Output Parameter:
695d382aafbSBarry Smith +  r1 - memory allocated in first chunk
696d382aafbSBarry Smith .  r2 - memory allocated in second chunk
697d382aafbSBarry Smith .  r3 - memory allocated in third chunk
698d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
699d382aafbSBarry Smith 
700d382aafbSBarry Smith    Level: developer
701d382aafbSBarry Smith 
702d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
703d382aafbSBarry Smith 
704d382aafbSBarry Smith   Concepts: memory allocation
705d382aafbSBarry Smith 
706d382aafbSBarry Smith M*/
707d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
708d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
709d382aafbSBarry Smith #else
710d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
7113b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
712d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
713d382aafbSBarry Smith #endif
714d382aafbSBarry Smith 
715d382aafbSBarry Smith /*MC
716503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
717d382aafbSBarry Smith 
718eca87e8dSBarry Smith    Synopsis:
719eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
720eca87e8dSBarry Smith 
721eca87e8dSBarry Smith    Not Collective
722eca87e8dSBarry Smith 
723d382aafbSBarry Smith    Input Parameter:
724d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
725d382aafbSBarry Smith .  t1 - type of first memory elements
726d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
727d382aafbSBarry Smith .  t2 - type of second memory elements
728d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
729d382aafbSBarry Smith .  t3 - type of third memory elements
730d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
731d382aafbSBarry Smith .  t4 - type of fourth memory elements
732d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
733d382aafbSBarry Smith -  t5 - type of fifth memory elements
734d382aafbSBarry Smith 
735d382aafbSBarry Smith    Output Parameter:
736d382aafbSBarry Smith +  r1 - memory allocated in first chunk
737d382aafbSBarry Smith .  r2 - memory allocated in second chunk
738d382aafbSBarry Smith .  r3 - memory allocated in third chunk
739d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
740d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
741d382aafbSBarry Smith 
742d382aafbSBarry Smith    Level: developer
743d382aafbSBarry Smith 
744d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
745d382aafbSBarry Smith 
746d382aafbSBarry Smith   Concepts: memory allocation
747d382aafbSBarry Smith 
748d382aafbSBarry Smith M*/
749d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
750d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
751d382aafbSBarry Smith #else
752d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7533b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
754d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
755d382aafbSBarry Smith #endif
756d382aafbSBarry Smith 
757d382aafbSBarry Smith 
758d382aafbSBarry Smith /*MC
759503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
760d382aafbSBarry Smith 
761eca87e8dSBarry Smith    Synopsis:
762eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
763eca87e8dSBarry Smith 
764eca87e8dSBarry Smith    Not Collective
765eca87e8dSBarry Smith 
766d382aafbSBarry Smith    Input Parameter:
767d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
768d382aafbSBarry Smith .  t1 - type of first memory elements
769d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
770d382aafbSBarry Smith .  t2 - type of second memory elements
771d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
772d382aafbSBarry Smith .  t3 - type of third memory elements
773d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
774d382aafbSBarry Smith .  t4 - type of fourth memory elements
775d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
776d382aafbSBarry Smith .  t5 - type of fifth memory elements
777d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
778d382aafbSBarry Smith -  t6 - type of sixth memory elements
779d382aafbSBarry Smith 
780d382aafbSBarry Smith    Output Parameter:
781d382aafbSBarry Smith +  r1 - memory allocated in first chunk
782d382aafbSBarry Smith .  r2 - memory allocated in second chunk
783d382aafbSBarry Smith .  r3 - memory allocated in third chunk
784d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
785d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
786d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
787d382aafbSBarry Smith 
788d382aafbSBarry Smith    Level: developer
789d382aafbSBarry Smith 
790d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
791d382aafbSBarry Smith 
792d382aafbSBarry Smith   Concepts: memory allocation
793d382aafbSBarry Smith 
794d382aafbSBarry Smith M*/
795d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
796d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
797d382aafbSBarry Smith #else
798d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7993b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
800d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
801d382aafbSBarry Smith #endif
802d382aafbSBarry Smith 
803d382aafbSBarry Smith /*MC
804503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
805d382aafbSBarry Smith 
806eca87e8dSBarry Smith    Synopsis:
807eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
808eca87e8dSBarry Smith 
809eca87e8dSBarry Smith    Not Collective
810eca87e8dSBarry Smith 
811d382aafbSBarry Smith    Input Parameter:
812d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
813d382aafbSBarry Smith .  t1 - type of first memory elements
814d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
815d382aafbSBarry Smith .  t2 - type of second memory elements
816d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
817d382aafbSBarry Smith .  t3 - type of third memory elements
818d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
819d382aafbSBarry Smith .  t4 - type of fourth memory elements
820d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
821d382aafbSBarry Smith .  t5 - type of fifth memory elements
822d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
823d382aafbSBarry Smith .  t6 - type of sixth memory elements
824d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
825d382aafbSBarry Smith -  t7 - type of sixth memory elements
826d382aafbSBarry Smith 
827d382aafbSBarry Smith    Output Parameter:
828d382aafbSBarry Smith +  r1 - memory allocated in first chunk
829d382aafbSBarry Smith .  r2 - memory allocated in second chunk
830d382aafbSBarry Smith .  r3 - memory allocated in third chunk
831d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
832d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
833d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
834eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
835d382aafbSBarry Smith 
836d382aafbSBarry Smith    Level: developer
837d382aafbSBarry Smith 
838d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
839d382aafbSBarry Smith 
840d382aafbSBarry Smith   Concepts: memory allocation
841d382aafbSBarry Smith 
842d382aafbSBarry Smith M*/
843d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
844d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
845d382aafbSBarry Smith #else
846d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8473b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
848d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
849d382aafbSBarry Smith #endif
850d382aafbSBarry Smith 
851d382aafbSBarry Smith /*MC
852503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
853d382aafbSBarry Smith 
854eca87e8dSBarry Smith    Synopsis:
855eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
856eca87e8dSBarry Smith 
857eca87e8dSBarry Smith    Not Collective
858eca87e8dSBarry Smith 
859d382aafbSBarry Smith    Input Parameter:
860d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
861d382aafbSBarry Smith 
862d382aafbSBarry Smith    Output Parameter:
863d382aafbSBarry Smith .  result - memory allocated
864d382aafbSBarry Smith 
865d382aafbSBarry Smith    Level: beginner
866d382aafbSBarry Smith 
867ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
868d382aafbSBarry Smith 
869d382aafbSBarry Smith   Concepts: memory allocation
870d382aafbSBarry Smith 
871d382aafbSBarry Smith M*/
872d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
873ad0619ddSBarry Smith 
874ad0619ddSBarry Smith /*MC
875ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
876ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
877ad0619ddSBarry Smith 
878ad0619ddSBarry Smith    Synopsis:
879ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
880ad0619ddSBarry Smith 
881ad0619ddSBarry Smith    Not Collective
882ad0619ddSBarry Smith 
883ad0619ddSBarry Smith    Input Parameter:
884ad0619ddSBarry Smith +  obj - object memory is logged to
885ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
886ad0619ddSBarry Smith 
887ad0619ddSBarry Smith    Output Parameter:
888ad0619ddSBarry Smith .  result - memory allocated
889ad0619ddSBarry Smith 
890ad0619ddSBarry Smith    Level: developer
891ad0619ddSBarry Smith 
892ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
893ad0619ddSBarry Smith 
894ad0619ddSBarry Smith   Concepts: memory allocation
895ad0619ddSBarry Smith 
896ad0619ddSBarry Smith M*/
897d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
898d382aafbSBarry Smith 
899d382aafbSBarry Smith /*MC
900d382aafbSBarry Smith    PetscFree - Frees memory
901d382aafbSBarry Smith 
902eca87e8dSBarry Smith    Synopsis:
903eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
904eca87e8dSBarry Smith 
905eca87e8dSBarry Smith    Not Collective
906eca87e8dSBarry Smith 
907d382aafbSBarry Smith    Input Parameter:
908d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
909d382aafbSBarry Smith 
910d382aafbSBarry Smith    Level: beginner
911d382aafbSBarry Smith 
912d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
913d382aafbSBarry Smith 
914d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
915d382aafbSBarry Smith 
916d382aafbSBarry Smith   Concepts: memory allocation
917d382aafbSBarry Smith 
918d382aafbSBarry Smith M*/
91912537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
920d382aafbSBarry Smith 
921d382aafbSBarry Smith /*MC
922d382aafbSBarry Smith    PetscFreeVoid - Frees memory
923d382aafbSBarry Smith 
924d382aafbSBarry Smith    Synopsis:
925d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
926d382aafbSBarry Smith 
927eca87e8dSBarry Smith    Not Collective
928eca87e8dSBarry Smith 
929eca87e8dSBarry Smith    Input Parameter:
930eca87e8dSBarry Smith .   memory - memory to free
931eca87e8dSBarry Smith 
932d382aafbSBarry Smith    Level: beginner
933d382aafbSBarry Smith 
934d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
935d382aafbSBarry Smith 
936d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
937d382aafbSBarry Smith 
938d382aafbSBarry Smith   Concepts: memory allocation
939d382aafbSBarry Smith 
940d382aafbSBarry Smith M*/
9412714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
942d382aafbSBarry Smith 
943d382aafbSBarry Smith 
944d382aafbSBarry Smith /*MC
945d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
946d382aafbSBarry Smith 
947eca87e8dSBarry Smith    Synopsis:
948eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
949eca87e8dSBarry Smith 
950eca87e8dSBarry Smith    Not Collective
951eca87e8dSBarry Smith 
952d382aafbSBarry Smith    Input Parameter:
953d382aafbSBarry Smith +   memory1 - memory to free
954d382aafbSBarry Smith -   memory2 - 2nd memory to free
955d382aafbSBarry Smith 
956d382aafbSBarry Smith    Level: developer
957d382aafbSBarry Smith 
958d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
959d382aafbSBarry Smith 
960d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
961d382aafbSBarry Smith 
962d382aafbSBarry Smith   Concepts: memory allocation
963d382aafbSBarry Smith 
964d382aafbSBarry Smith M*/
965d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
966d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
967d382aafbSBarry Smith #else
96881dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
969d382aafbSBarry Smith #endif
970d382aafbSBarry Smith 
971d382aafbSBarry Smith /*MC
972d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
973d382aafbSBarry Smith 
974eca87e8dSBarry Smith    Synopsis:
975eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
976eca87e8dSBarry Smith 
977eca87e8dSBarry Smith    Not Collective
978eca87e8dSBarry Smith 
979d382aafbSBarry Smith    Input Parameter:
980d382aafbSBarry Smith +   memory1 - memory to free
981d382aafbSBarry Smith .   memory2 - 2nd memory to free
982d382aafbSBarry Smith -   memory3 - 3rd memory to free
983d382aafbSBarry Smith 
984d382aafbSBarry Smith    Level: developer
985d382aafbSBarry Smith 
986d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
987d382aafbSBarry Smith 
988d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
989d382aafbSBarry Smith 
990d382aafbSBarry Smith   Concepts: memory allocation
991d382aafbSBarry Smith 
992d382aafbSBarry Smith M*/
993d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
994d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
995d382aafbSBarry Smith #else
99681dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
997d382aafbSBarry Smith #endif
998d382aafbSBarry Smith 
999d382aafbSBarry Smith /*MC
1000d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
1001d382aafbSBarry Smith 
1002eca87e8dSBarry Smith    Synopsis:
1003eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
1004eca87e8dSBarry Smith 
1005eca87e8dSBarry Smith    Not Collective
1006eca87e8dSBarry Smith 
1007d382aafbSBarry Smith    Input Parameter:
1008d382aafbSBarry Smith +   m1 - memory to free
1009d382aafbSBarry Smith .   m2 - 2nd memory to free
1010d382aafbSBarry Smith .   m3 - 3rd memory to free
1011d382aafbSBarry Smith -   m4 - 4th memory to free
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith    Level: developer
1014d382aafbSBarry Smith 
1015d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1016d382aafbSBarry Smith 
1017d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1018d382aafbSBarry Smith 
1019d382aafbSBarry Smith   Concepts: memory allocation
1020d382aafbSBarry Smith 
1021d382aafbSBarry Smith M*/
1022d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1023d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1024d382aafbSBarry Smith #else
102581dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1026d382aafbSBarry Smith #endif
1027d382aafbSBarry Smith 
1028d382aafbSBarry Smith /*MC
1029d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1030d382aafbSBarry Smith 
1031eca87e8dSBarry Smith    Synopsis:
1032eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1033eca87e8dSBarry Smith 
1034eca87e8dSBarry Smith    Not Collective
1035eca87e8dSBarry Smith 
1036d382aafbSBarry Smith    Input Parameter:
1037d382aafbSBarry Smith +   m1 - memory to free
1038d382aafbSBarry Smith .   m2 - 2nd memory to free
1039d382aafbSBarry Smith .   m3 - 3rd memory to free
1040d382aafbSBarry Smith .   m4 - 4th memory to free
1041d382aafbSBarry Smith -   m5 - 5th memory to free
1042d382aafbSBarry Smith 
1043d382aafbSBarry Smith    Level: developer
1044d382aafbSBarry Smith 
1045d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1046d382aafbSBarry Smith 
1047d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1048d382aafbSBarry Smith 
1049d382aafbSBarry Smith   Concepts: memory allocation
1050d382aafbSBarry Smith 
1051d382aafbSBarry Smith M*/
1052d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1053d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1054d382aafbSBarry Smith #else
105581dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1056d382aafbSBarry Smith #endif
1057d382aafbSBarry Smith 
1058d382aafbSBarry Smith 
1059d382aafbSBarry Smith /*MC
1060d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1061d382aafbSBarry Smith 
1062eca87e8dSBarry Smith    Synopsis:
1063eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1064eca87e8dSBarry Smith 
1065eca87e8dSBarry Smith    Not Collective
1066eca87e8dSBarry Smith 
1067d382aafbSBarry Smith    Input Parameter:
1068d382aafbSBarry Smith +   m1 - memory to free
1069d382aafbSBarry Smith .   m2 - 2nd memory to free
1070d382aafbSBarry Smith .   m3 - 3rd memory to free
1071d382aafbSBarry Smith .   m4 - 4th memory to free
1072d382aafbSBarry Smith .   m5 - 5th memory to free
1073d382aafbSBarry Smith -   m6 - 6th memory to free
1074d382aafbSBarry Smith 
1075d382aafbSBarry Smith 
1076d382aafbSBarry Smith    Level: developer
1077d382aafbSBarry Smith 
1078d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1079d382aafbSBarry Smith 
1080d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1081d382aafbSBarry Smith 
1082d382aafbSBarry Smith   Concepts: memory allocation
1083d382aafbSBarry Smith 
1084d382aafbSBarry Smith M*/
1085d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1086d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1087d382aafbSBarry Smith #else
108881dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1089d382aafbSBarry Smith #endif
1090d382aafbSBarry Smith 
1091d382aafbSBarry Smith /*MC
1092d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1093d382aafbSBarry Smith 
1094eca87e8dSBarry Smith    Synopsis:
1095eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1096eca87e8dSBarry Smith 
1097eca87e8dSBarry Smith    Not Collective
1098eca87e8dSBarry Smith 
1099d382aafbSBarry Smith    Input Parameter:
1100d382aafbSBarry Smith +   m1 - memory to free
1101d382aafbSBarry Smith .   m2 - 2nd memory to free
1102d382aafbSBarry Smith .   m3 - 3rd memory to free
1103d382aafbSBarry Smith .   m4 - 4th memory to free
1104d382aafbSBarry Smith .   m5 - 5th memory to free
1105d382aafbSBarry Smith .   m6 - 6th memory to free
1106d382aafbSBarry Smith -   m7 - 7th memory to free
1107d382aafbSBarry Smith 
1108d382aafbSBarry Smith 
1109d382aafbSBarry Smith    Level: developer
1110d382aafbSBarry Smith 
1111d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1112d382aafbSBarry Smith 
1113d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1114d382aafbSBarry Smith           PetscMalloc7()
1115d382aafbSBarry Smith 
1116d382aafbSBarry Smith   Concepts: memory allocation
1117d382aafbSBarry Smith 
1118d382aafbSBarry Smith M*/
1119d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1120d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1121d382aafbSBarry Smith #else
112281dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1123d382aafbSBarry Smith #endif
1124d382aafbSBarry Smith 
11257087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11267087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11277087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11287087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1129d382aafbSBarry Smith 
1130d382aafbSBarry Smith /*
113166d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1132d382aafbSBarry Smith */
11337087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11347087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11357087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11367087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11377087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11387087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11397087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
114018a2528dSJed Brown extern PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1141d382aafbSBarry Smith 
1142d382aafbSBarry Smith 
1143d382aafbSBarry Smith /*E
1144d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1145d382aafbSBarry Smith 
1146d382aafbSBarry Smith    Level: beginner
1147d382aafbSBarry Smith 
1148d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1149d382aafbSBarry Smith 
1150d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1151d382aafbSBarry Smith           PetscDataTypeGetSize()
1152d382aafbSBarry Smith 
1153d382aafbSBarry Smith E*/
1154d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
115559a34000SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType;
1156d382aafbSBarry Smith extern const char *PetscDataTypes[];
1157d382aafbSBarry Smith 
1158d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1159d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1160d382aafbSBarry Smith #else
1161ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1162d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
116359a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
116459a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1165d382aafbSBarry Smith #else
1166d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1167d382aafbSBarry Smith #endif
1168d382aafbSBarry Smith #endif
1169ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1170d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
117159a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
117259a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1173d382aafbSBarry Smith #else
1174d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1175d382aafbSBarry Smith #endif
1176d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1177d382aafbSBarry Smith 
11787087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11797087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11807087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1181d382aafbSBarry Smith 
1182d382aafbSBarry Smith /*
1183d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1184d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1185d382aafbSBarry Smith    functionality and/or error checking.
1186d382aafbSBarry Smith */
11877087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11887087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11897087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11907087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11917087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11927087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11937087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11957087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11967087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11977087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11987087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11997087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
12007087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
12017087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
12027087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
12037087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
12047087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
12057087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
120674722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
12077ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
12087087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
12097087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1210d382aafbSBarry Smith 
1211d382aafbSBarry Smith /*S
1212d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1213d382aafbSBarry Smith 
1214d382aafbSBarry Smith   Level: intermediate
1215d382aafbSBarry Smith 
1216d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1217d382aafbSBarry Smith S*/
1218d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1219d382aafbSBarry Smith 
12207087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
12217087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
12228c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith /*
1225d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1226d382aafbSBarry Smith */
12277087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1228ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12297087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1230d382aafbSBarry Smith #else
1231d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1232d382aafbSBarry Smith #endif
1233ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1234d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1235d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1236d9822059SBarry Smith #else
1237d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1238d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1239d9822059SBarry Smith #endif
12407087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1241d382aafbSBarry Smith 
1242eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1243eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1244eb3f98d2SBarry Smith 
1245d382aafbSBarry Smith /*S
1246d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1247d382aafbSBarry Smith 
1248d382aafbSBarry Smith    Level: beginner
1249d382aafbSBarry Smith 
1250d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1251d382aafbSBarry Smith 
12521890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1253d382aafbSBarry Smith S*/
1254d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1255d382aafbSBarry Smith 
1256d382aafbSBarry Smith /*S
1257d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1258d382aafbSBarry Smith       by string name
1259d382aafbSBarry Smith 
1260d382aafbSBarry Smith    Level: advanced
1261d382aafbSBarry Smith 
1262d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1263d382aafbSBarry Smith S*/
1264d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1265d382aafbSBarry Smith 
1266e4d1774bSDmitry Karpeev /*S
1267e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1268e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1269e4d1774bSDmitry Karpeev 
1270e4d1774bSDmitry Karpeev    Level: advanced
1271e4d1774bSDmitry Karpeev 
1272e4d1774bSDmitry Karpeev .seealso:  PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1273e4d1774bSDmitry Karpeev S*/
1274e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1275e4d1774bSDmitry Karpeev 
1276d382aafbSBarry Smith /*E
1277d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1278d382aafbSBarry Smith 
1279d382aafbSBarry Smith   Level: beginner
1280d382aafbSBarry Smith 
1281d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1282d382aafbSBarry Smith 
1283d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1284d382aafbSBarry Smith 
1285d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1286d382aafbSBarry Smith 
1287d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1288d382aafbSBarry Smith 
1289d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1290d382aafbSBarry Smith 
1291d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1292d382aafbSBarry Smith E*/
1293d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1294d382aafbSBarry Smith 
1295d382aafbSBarry Smith #include "petscviewer.h"
1296d382aafbSBarry Smith #include "petscoptions.h"
1297d382aafbSBarry Smith 
12980700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12997087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
13007087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
13017087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1302d382aafbSBarry Smith 
1303d382aafbSBarry Smith /*
1304d382aafbSBarry Smith    Routines that get memory usage information from the OS
1305d382aafbSBarry Smith */
13067087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
13077087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
13087087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
13097087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1310d382aafbSBarry Smith 
13117087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
13127087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
13137087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
13147087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1315d382aafbSBarry Smith 
1316d382aafbSBarry Smith /*
1317d382aafbSBarry Smith    Initialization of PETSc
1318d382aafbSBarry Smith */
13197087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1320d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
13217087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
13227087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
13237087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
13247087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
132509573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
13267087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
13277087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
13287087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1329d382aafbSBarry Smith 
13307087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
13317087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1332d382aafbSBarry Smith 
1333d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
133485afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
133585afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
133685afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
133785afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
133885afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
133985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
134085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1341d382aafbSBarry Smith 
13427087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13437087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13447087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13455180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1346d382aafbSBarry Smith 
1347d382aafbSBarry Smith /*
1348d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1349d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1350d382aafbSBarry Smith    C++.
1351d382aafbSBarry Smith */
1352d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1353d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1354d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1355d382aafbSBarry Smith 
1356d382aafbSBarry Smith /*
1357d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1358d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1359503cfb0cSBarry Smith 
1360503cfb0cSBarry Smith    Level: developer
1361503cfb0cSBarry Smith 
1362503cfb0cSBarry Smith .seealso: PetscUseMethod()
1363d382aafbSBarry Smith */
1364d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1365d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1366d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1367d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1368d382aafbSBarry Smith   }
1369503cfb0cSBarry Smith 
1370503cfb0cSBarry Smith /*
1371503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1372503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1373503cfb0cSBarry Smith 
1374503cfb0cSBarry Smith    Level: developer
1375503cfb0cSBarry Smith 
1376503cfb0cSBarry Smith .seealso: PetscTryMethod()
1377503cfb0cSBarry Smith */
1378d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1379d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1380d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1381d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1382703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1383d382aafbSBarry Smith   }
1384503cfb0cSBarry Smith 
1385d382aafbSBarry Smith /*
1386d382aafbSBarry Smith     Functions that can act on any PETSc object.
1387d382aafbSBarry Smith */
1388fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13907087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1391609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13927087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13937087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13947087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13957087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13967087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13977087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13987087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13997087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
14007087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
14017087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
14027087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
14037087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
14047087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
14057087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
14067087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
14076ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
14087087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
14097087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
14107087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
14117087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
14127087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
14137087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
14147087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
14157087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1416d382aafbSBarry Smith 
1417d382aafbSBarry Smith /*MC
1418d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1419d382aafbSBarry Smith 
1420eca87e8dSBarry Smith     Synopsis:
1421eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1422eca87e8dSBarry Smith 
1423ad4df100SBarry Smith    Logically Collective on PetscObject
1424d382aafbSBarry Smith 
1425d382aafbSBarry Smith    Input Parameters:
1426d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1427d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1428d382aafbSBarry Smith .  name - name associated with the child function
1429d382aafbSBarry Smith .  fname - name of the function
1430d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1431d382aafbSBarry Smith 
1432d382aafbSBarry Smith    Level: advanced
1433d382aafbSBarry Smith 
1434d382aafbSBarry Smith 
1435d382aafbSBarry Smith    Notes:
1436d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1437d382aafbSBarry Smith 
1438d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1439d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1440d382aafbSBarry Smith 
1441d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
144220de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1443d382aafbSBarry Smith    enabled.
1444d382aafbSBarry Smith 
1445d382aafbSBarry Smith    Concepts: objects^composing functions
1446d382aafbSBarry Smith    Concepts: composing functions
1447d382aafbSBarry Smith    Concepts: functions^querying
1448d382aafbSBarry Smith    Concepts: objects^querying
1449d382aafbSBarry Smith    Concepts: querying objects
1450d382aafbSBarry Smith 
1451d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1452d382aafbSBarry Smith M*/
1453d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1454d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1455d382aafbSBarry Smith #else
1456d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1457d382aafbSBarry Smith #endif
1458d382aafbSBarry Smith 
14597087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14607087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14617087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14627087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14637087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14647087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14657087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14667087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14677087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14687087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14697087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14707087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14712b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14727087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14737087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1474d382aafbSBarry Smith 
1475d382aafbSBarry Smith /*
1476d382aafbSBarry Smith     Defines PETSc error handling.
1477d382aafbSBarry Smith */
1478d382aafbSBarry Smith #include "petscerror.h"
1479d382aafbSBarry Smith 
1480d382aafbSBarry Smith /*S
1481503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1482d382aafbSBarry Smith 
14831d0fab5eSBarry Smith    Level: developer
1484d382aafbSBarry Smith 
14851d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14861d0fab5eSBarry Smith 
14871d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1488d382aafbSBarry Smith S*/
1489d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1490d382aafbSBarry Smith 
1491fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14927087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1493bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14947087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14956ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14967087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1497d382aafbSBarry Smith 
1498d382aafbSBarry Smith /*
1499503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1500d382aafbSBarry Smith   link libraries that will be loaded as needed.
1501d382aafbSBarry Smith */
15027087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
15037087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
15044b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
15057087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1506d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1507d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1508d382aafbSBarry Smith #else
1509d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1510d382aafbSBarry Smith #endif
15117087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
15127087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
15137087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
15147087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1515d382aafbSBarry Smith 
151648703020SDmitry Karpeev /*
151748703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
151848703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
151948703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
152048703020SDmitry Karpeev */
15212356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
152248703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListDestroy(PetscOpFList*);
15232356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
152448703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListView(PetscOpFList,PetscViewer);
1525d382aafbSBarry Smith /*S
1526d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1527d382aafbSBarry Smith 
1528d382aafbSBarry Smith    Level: advanced
1529d382aafbSBarry Smith 
153020de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1531d382aafbSBarry Smith 
1532d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1533d382aafbSBarry Smith S*/
1534d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
15357087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
15367087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
15377087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
15387087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
15397087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
15407087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
15417087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
15427087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
1543d382aafbSBarry Smith 
1544d382aafbSBarry Smith /*
1545a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
154605846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
154705846914SDmitry Karpeev */
1548a5a3d712SDmitry Karpeev #include "petscshell.h"
154905846914SDmitry Karpeev 
155005846914SDmitry Karpeev /*
1551d382aafbSBarry Smith      Useful utility routines
1552d382aafbSBarry Smith */
15537087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15547087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15557087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1556d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1557d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15587087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1559d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1560d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15617087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15627087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1563d382aafbSBarry Smith 
1564503cfb0cSBarry Smith /*
1565ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1566503cfb0cSBarry Smith 
1567503cfb0cSBarry Smith     Notes: This is useful in cases like
1568503cfb0cSBarry Smith $     int        *a;
1569ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1570ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1571503cfb0cSBarry Smith */
1572d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1573503cfb0cSBarry Smith 
1574d382aafbSBarry Smith /*
1575d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1576d382aafbSBarry Smith */
1577d382aafbSBarry Smith #include "petscdraw.h"
1578d382aafbSBarry Smith 
1579d382aafbSBarry Smith /*
1580d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1581d382aafbSBarry Smith */
1582*b45d2f2cSJed Brown #include "petsc-private/petscimpl.h"
1583503cfb0cSBarry Smith 
1584238ccf28SShri Abhyankar 
1585d382aafbSBarry Smith /*MC
1586d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1587d382aafbSBarry Smith 
1588d382aafbSBarry Smith    Synopsis:
1589d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1590d382aafbSBarry Smith 
1591eca87e8dSBarry Smith     Not Collective
1592eca87e8dSBarry Smith 
1593d382aafbSBarry Smith     Input Parameters:
1594d382aafbSBarry Smith .   format - the usual printf() format string
1595d382aafbSBarry Smith 
1596d382aafbSBarry Smith    Options Database Keys:
1597d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1598d382aafbSBarry Smith          (default) stderr
1599d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1600d382aafbSBarry Smith           error is handled.)
1601d382aafbSBarry Smith 
1602d382aafbSBarry Smith    Notes: Use
1603d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1604d382aafbSBarry Smith $                        error is handled.) and
1605d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1606c9a19010SBarry Smith $        of you can use your own function
1607d382aafbSBarry Smith 
1608d382aafbSBarry Smith           Use
1609d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1610d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1611d382aafbSBarry Smith 
1612d382aafbSBarry Smith           Use
1613d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1614d382aafbSBarry Smith 
1615d382aafbSBarry Smith    Level: developer
1616d382aafbSBarry Smith 
1617d382aafbSBarry Smith     Fortran Note:
1618d382aafbSBarry Smith     This routine is not supported in Fortran.
1619d382aafbSBarry Smith 
1620d382aafbSBarry Smith     Concepts: error messages^printing
1621d382aafbSBarry Smith     Concepts: printing^error messages
1622d382aafbSBarry Smith 
1623c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1624d382aafbSBarry Smith M*/
16257087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1626d382aafbSBarry Smith 
1627d382aafbSBarry Smith /*MC
1628d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1629d382aafbSBarry Smith 
1630d382aafbSBarry Smith    Synopsis:
1631d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1632d382aafbSBarry Smith 
1633eca87e8dSBarry Smith     Not Collective
1634eca87e8dSBarry Smith 
1635d382aafbSBarry Smith     Input Parameters:
1636d382aafbSBarry Smith .   format - the usual printf() format string
1637d382aafbSBarry Smith 
1638d382aafbSBarry Smith    Level: developer
1639d382aafbSBarry Smith 
1640d382aafbSBarry Smith     Fortran Note:
1641d382aafbSBarry Smith     This routine is not supported in Fortran.
1642d382aafbSBarry Smith 
1643d382aafbSBarry Smith     Concepts: help messages^printing
1644d382aafbSBarry Smith     Concepts: printing^help messages
1645d382aafbSBarry Smith 
1646d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1647d382aafbSBarry Smith M*/
16487087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1649d382aafbSBarry Smith 
1650fcfd50ebSBarry Smith /*
1651fcfd50ebSBarry Smith      Defines PETSc profiling.
1652fcfd50ebSBarry Smith */
1653fcfd50ebSBarry Smith #include "petsclog.h"
1654fcfd50ebSBarry Smith 
1655fcfd50ebSBarry Smith /*
1656fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1657fcfd50ebSBarry Smith */
1658fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1659fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1660fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1661fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1662fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1663fcfd50ebSBarry Smith #else
1664fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1665fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1666fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1667fcfd50ebSBarry Smith #endif
1668fcfd50ebSBarry Smith 
1669fcfd50ebSBarry Smith /*
1670fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1671fcfd50ebSBarry Smith */
1672fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1673fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1674fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1675fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1676fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1677fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1678257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1679fcfd50ebSBarry Smith 
1680fcfd50ebSBarry Smith 
1681fcfd50ebSBarry Smith 
1682fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1683fcfd50ebSBarry Smith #include <stdarg.h>
1684fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1685fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1686fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1687fcfd50ebSBarry Smith 
1688fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1689fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1690fcfd50ebSBarry Smith #endif
1691fcfd50ebSBarry Smith 
169209573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
169309573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
169409573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1695d382aafbSBarry Smith 
1696d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16977087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16987087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1699d382aafbSBarry Smith #endif
1700d382aafbSBarry Smith 
17017087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
17027087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
17037087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
17047087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
17057087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
17067087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
17077087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1708d382aafbSBarry Smith 
17097087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1710d382aafbSBarry Smith 
1711d382aafbSBarry Smith /*S
1712d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1713d382aafbSBarry Smith 
1714d382aafbSBarry Smith    Level: advanced
1715d382aafbSBarry Smith 
1716d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1717d382aafbSBarry Smith S*/
17187087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1719d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
17207087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
17217087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1722fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
17237087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
17247087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1725d382aafbSBarry Smith 
1726d382aafbSBarry Smith /*
1727d382aafbSBarry Smith    For use in debuggers
1728d382aafbSBarry Smith */
17297087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
17307087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
17317087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
17327087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
17337087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1734d382aafbSBarry Smith 
1735d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1736d382aafbSBarry Smith #include <memory.h>
1737d382aafbSBarry Smith #endif
1738d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1739d382aafbSBarry Smith #include <stdlib.h>
1740d382aafbSBarry Smith #endif
1741d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1742d382aafbSBarry Smith #include <strings.h>
1743d382aafbSBarry Smith #endif
1744d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1745d382aafbSBarry Smith #include <string.h>
1746d382aafbSBarry Smith #endif
17476c7e564aSBarry Smith 
17486c7e564aSBarry Smith 
1749d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1750d382aafbSBarry Smith #include <xmmintrin.h>
1751d382aafbSBarry Smith #endif
1752d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1753d382aafbSBarry Smith #include <stdint.h>
1754d382aafbSBarry Smith #endif
1755d382aafbSBarry Smith 
1756fcfd50ebSBarry Smith #undef __FUNCT__
1757fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1758d382aafbSBarry Smith /*@C
1759d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1760d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1761d382aafbSBarry Smith    PetscMemmove() in that case.
1762d382aafbSBarry Smith 
1763d382aafbSBarry Smith    Not Collective
1764d382aafbSBarry Smith 
1765d382aafbSBarry Smith    Input Parameters:
1766d382aafbSBarry Smith +  b - pointer to initial memory space
1767d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1768d382aafbSBarry Smith 
1769d382aafbSBarry Smith    Output Parameter:
1770d382aafbSBarry Smith .  a - pointer to copy space
1771d382aafbSBarry Smith 
1772d382aafbSBarry Smith    Level: intermediate
1773d382aafbSBarry Smith 
1774d382aafbSBarry Smith    Compile Option:
1775d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1776d382aafbSBarry Smith                                   for memory copies on double precision values.
1777d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1778d382aafbSBarry Smith                                   for memory copies on double precision values.
1779d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1780d382aafbSBarry Smith                                   for memory copies on double precision values.
1781d382aafbSBarry Smith 
1782d382aafbSBarry Smith    Note:
1783d382aafbSBarry Smith    This routine is analogous to memcpy().
1784d382aafbSBarry Smith 
1785503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1786503cfb0cSBarry Smith 
1787d382aafbSBarry Smith   Concepts: memory^copying
1788d382aafbSBarry Smith   Concepts: copying^memory
1789d382aafbSBarry Smith 
1790d382aafbSBarry Smith .seealso: PetscMemmove()
1791d382aafbSBarry Smith 
1792d382aafbSBarry Smith @*/
17937087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1794d382aafbSBarry Smith {
1795d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1796d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1797d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1798a7e36092SMatthew G Knepley   PetscFunctionBegin;
1799e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1800e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1801a7e36092SMatthew G Knepley #else
1802d382aafbSBarry Smith   PetscFunctionBegin;
1803a7e36092SMatthew G Knepley #endif
1804d382aafbSBarry Smith   if (a != b) {
1805d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1806d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1807e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1808d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1809d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1810d382aafbSBarry Smith     }
1811d382aafbSBarry Smith #endif
1812d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1813d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1814d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1815d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1816d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1817d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1818d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1819d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1820d382aafbSBarry Smith #else
1821d382aafbSBarry Smith       size_t      i;
1822d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1823d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1824d382aafbSBarry Smith #endif
1825d382aafbSBarry Smith     } else {
1826d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1827d382aafbSBarry Smith     }
1828d382aafbSBarry Smith #else
1829d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1830d382aafbSBarry Smith #endif
1831d382aafbSBarry Smith   }
1832d382aafbSBarry Smith   PetscFunctionReturn(0);
1833d382aafbSBarry Smith }
1834d382aafbSBarry Smith 
1835d382aafbSBarry Smith /*@C
1836d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1837d382aafbSBarry Smith 
1838d382aafbSBarry Smith    Not Collective
1839d382aafbSBarry Smith 
1840d382aafbSBarry Smith    Input Parameters:
1841d382aafbSBarry Smith +  a - pointer to beginning memory location
1842d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1843d382aafbSBarry Smith 
1844d382aafbSBarry Smith    Level: intermediate
1845d382aafbSBarry Smith 
1846d382aafbSBarry Smith    Compile Option:
1847d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1848d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1849d382aafbSBarry Smith 
1850503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1851503cfb0cSBarry Smith 
1852d382aafbSBarry Smith    Concepts: memory^zeroing
1853d382aafbSBarry Smith    Concepts: zeroing^memory
1854d382aafbSBarry Smith 
1855d382aafbSBarry Smith .seealso: PetscMemcpy()
1856d382aafbSBarry Smith @*/
18577087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1858d382aafbSBarry Smith {
1859d382aafbSBarry Smith   if (n > 0) {
1860d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1861e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1862d382aafbSBarry Smith #endif
1863d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1864d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1865d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1866d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1867d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1868d382aafbSBarry Smith     } else {
1869d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1870d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1871d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1872d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1873d382aafbSBarry Smith     } else {
1874d382aafbSBarry Smith #endif
1875d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1876d382aafbSBarry Smith       bzero((char *)a,n);
1877d382aafbSBarry Smith #else
1878d382aafbSBarry Smith       memset((char*)a,0,n);
1879d382aafbSBarry Smith #endif
1880d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1881d382aafbSBarry Smith     }
1882d382aafbSBarry Smith #endif
1883d382aafbSBarry Smith   }
1884d382aafbSBarry Smith   return 0;
1885d382aafbSBarry Smith }
1886d382aafbSBarry Smith 
1887d382aafbSBarry Smith /*MC
1888d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1889d382aafbSBarry Smith 
1890eca87e8dSBarry Smith    Synopsis:
1891eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1892eca87e8dSBarry Smith 
1893d382aafbSBarry Smith    Not Collective
1894d382aafbSBarry Smith 
1895d382aafbSBarry Smith    Input Parameters:
1896d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1897d382aafbSBarry Smith .  n - number of elements to fetch
1898d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
189950d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1900d382aafbSBarry Smith 
1901d382aafbSBarry Smith    Level: developer
1902d382aafbSBarry Smith 
1903d382aafbSBarry Smith    Notes:
1904d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1905d382aafbSBarry Smith 
190650d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
190750d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
190850d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
190963cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
191063cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
191163cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1912d382aafbSBarry Smith 
1913d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1914d382aafbSBarry Smith    address).
1915d382aafbSBarry Smith 
1916d382aafbSBarry Smith    Concepts: memory
1917d382aafbSBarry Smith M*/
1918d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1919d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1920d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1921d382aafbSBarry Smith   } while (0)
1922d382aafbSBarry Smith 
1923d382aafbSBarry Smith /*
1924e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1925d382aafbSBarry Smith */
1926d382aafbSBarry Smith #include "petscmatlab.h"
1927d382aafbSBarry Smith 
1928d382aafbSBarry Smith /*
1929d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1930d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1931d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1932d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1933e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1934d382aafbSBarry Smith */
1935d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1936d382aafbSBarry Smith 
1937d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1938d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1939d382aafbSBarry Smith #endif
1940d382aafbSBarry Smith 
19415a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
19425a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1943d382aafbSBarry Smith #endif
1944d382aafbSBarry Smith 
1945d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1946d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1947d382aafbSBarry Smith #endif
1948d382aafbSBarry Smith 
1949d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1950d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1951d382aafbSBarry Smith #endif
1952d382aafbSBarry Smith 
1953d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1954d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1955d382aafbSBarry Smith #endif
1956d382aafbSBarry Smith 
1957d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1958d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1959d382aafbSBarry Smith #endif
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1962d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1963d382aafbSBarry Smith #endif
1964d382aafbSBarry Smith 
1965d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1966d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1967d382aafbSBarry Smith #endif
1968d382aafbSBarry Smith 
1969d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1970d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1971d382aafbSBarry Smith #endif
1972d382aafbSBarry Smith 
1973d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1974d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1975d382aafbSBarry Smith #endif
1976d382aafbSBarry Smith 
1977d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1978d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1979d382aafbSBarry Smith #endif
1980d382aafbSBarry Smith 
1981d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1982d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1983d382aafbSBarry Smith #endif
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1986d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1987d382aafbSBarry Smith #endif
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1990d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1991d382aafbSBarry Smith #endif
1992d382aafbSBarry Smith 
1993d382aafbSBarry Smith #endif
1994d382aafbSBarry Smith 
1995d382aafbSBarry Smith /*
1996d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1997d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1998d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1999d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
2000d382aafbSBarry Smith    ugly extern "C" {} wrappers.
2001d382aafbSBarry Smith */
2002d382aafbSBarry Smith #if defined(__cplusplus)
2003da861ed6SJed Brown #define PETSC_EXTERN_C extern "C"
2004d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
2005d382aafbSBarry Smith #define EXTERN_C_END }
2006d382aafbSBarry Smith #else
2007da861ed6SJed Brown #define PETSC_EXTERN_C
2008d382aafbSBarry Smith #define EXTERN_C_BEGIN
2009d382aafbSBarry Smith #define EXTERN_C_END
2010d382aafbSBarry Smith #endif
2011d382aafbSBarry Smith 
2012d382aafbSBarry Smith /* --------------------------------------------------------------------*/
2013d382aafbSBarry Smith 
2014d382aafbSBarry Smith /*MC
2015d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
2016d382aafbSBarry Smith         communication
2017d382aafbSBarry Smith 
2018d382aafbSBarry Smith    Level: beginner
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
2021d382aafbSBarry Smith 
2022d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
2023d382aafbSBarry Smith M*/
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith /*MC
2026d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
2027d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
2028d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
2029d382aafbSBarry Smith 
2030d382aafbSBarry Smith 
2031d382aafbSBarry Smith    Level: beginner
2032d382aafbSBarry Smith 
2033d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
2034d382aafbSBarry Smith M*/
2035d382aafbSBarry Smith 
2036d382aafbSBarry Smith /*MC
2037d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2038d382aafbSBarry Smith 
2039d382aafbSBarry Smith    Level: beginner
2040d382aafbSBarry Smith 
2041d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
2042d382aafbSBarry Smith M*/
2043d382aafbSBarry Smith 
2044d382aafbSBarry Smith /*MC
2045d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
2046d382aafbSBarry Smith    Level: beginner
2047d382aafbSBarry Smith 
2048d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2049d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2050d382aafbSBarry Smith 
2051d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2052d382aafbSBarry Smith M*/
2053d382aafbSBarry Smith 
2054d382aafbSBarry Smith /*MC
2055d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2056d382aafbSBarry Smith 
2057d382aafbSBarry Smith    Level: beginner
2058d382aafbSBarry Smith 
2059d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2060d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2061d382aafbSBarry Smith 
2062d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2063d382aafbSBarry Smith M*/
2064d382aafbSBarry Smith 
2065d382aafbSBarry Smith /*MC
2066d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith    Level: beginner
2069d382aafbSBarry Smith 
2070d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2071d382aafbSBarry Smith           pass this value
2072d382aafbSBarry Smith 
2073d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2074d382aafbSBarry Smith M*/
2075d382aafbSBarry Smith 
2076d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2077d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2078d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2079d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2080d382aafbSBarry Smith #else
2081d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2082d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2083d382aafbSBarry Smith #endif
2084d382aafbSBarry Smith #endif
2085d382aafbSBarry Smith 
2086d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2087d382aafbSBarry Smith 
2088d382aafbSBarry Smith /* Limit MPI to 32-bits */
2089d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2090d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2091d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2092d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2093d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2094d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2095d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2096d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2097d382aafbSBarry Smith 
2098d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2099e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2100e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2101eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2102eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2103d382aafbSBarry Smith 
2104d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2105e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2106eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2107d382aafbSBarry Smith #else
2108d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2109d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2110d382aafbSBarry Smith #endif
2111d382aafbSBarry Smith 
2112d382aafbSBarry Smith #else
2113d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2114d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2115d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2116d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2117d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2118d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2119d382aafbSBarry Smith #endif
2120d382aafbSBarry Smith 
2121d382aafbSBarry Smith 
2122d382aafbSBarry Smith /*
2123d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2124d382aafbSBarry Smith    as a regular user variable.
2125d382aafbSBarry Smith */
2126d382aafbSBarry Smith #if defined(hz)
2127d382aafbSBarry Smith #undef hz
2128d382aafbSBarry Smith #endif
2129d382aafbSBarry Smith 
2130d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2131d382aafbSBarry Smith 
2132d382aafbSBarry Smith 
2133d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2134d382aafbSBarry Smith #include <limits.h>
2135d382aafbSBarry Smith #endif
2136d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2137d382aafbSBarry Smith #include <sys/param.h>
2138d382aafbSBarry Smith #endif
2139d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2140d382aafbSBarry Smith #include <sys/types.h>
2141d382aafbSBarry Smith #endif
2142d382aafbSBarry Smith #if defined(MAXPATHLEN)
2143d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2144d382aafbSBarry Smith #elif defined(MAX_PATH)
2145d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2146d382aafbSBarry Smith #elif defined(_MAX_PATH)
2147d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2148d382aafbSBarry Smith #else
2149d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2150d382aafbSBarry Smith #endif
2151d382aafbSBarry Smith 
2152d382aafbSBarry Smith /* Special support for C++ */
2153d382aafbSBarry Smith #include "petscsys.hh"
21546c7e564aSBarry Smith 
2155d382aafbSBarry Smith 
2156d382aafbSBarry Smith /*MC
2157d382aafbSBarry Smith 
2158d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2159d382aafbSBarry Smith 
2160d382aafbSBarry Smith $    1) classic Fortran 77 style
2161d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2162d382aafbSBarry Smith $       XXX variablename
2163d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2164d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2165d382aafbSBarry Smith $
2166d382aafbSBarry Smith $    2) classic Fortran 90 style
2167d1716517SSatish Balay $#include "finclude/petscXXX.h"
2168d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2169d382aafbSBarry Smith $       XXX variablename
2170d382aafbSBarry Smith $
2171d382aafbSBarry Smith $    3) Using Fortran modules
2172d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2173d382aafbSBarry Smith $         use petscXXXX
2174d382aafbSBarry Smith $       XXX variablename
2175d382aafbSBarry Smith $
2176d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2177d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2178d382aafbSBarry Smith $         use petscXXXX
2179d382aafbSBarry Smith $       type(XXX) variablename
2180e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2181d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2182d382aafbSBarry Smith 
2183d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2184d382aafbSBarry Smith 
2185d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2186d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2187d382aafbSBarry Smith $        integer variablename
2188d382aafbSBarry Smith $
2189d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2190d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2191d382aafbSBarry Smith 
2192d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2193d382aafbSBarry Smith for only a few PETSc functions.
2194d382aafbSBarry Smith 
2195d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2196d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2197d382aafbSBarry Smith you cannot have something like
2198d382aafbSBarry Smith $      PetscInt row,col
2199d382aafbSBarry Smith $      PetscScalar val
2200d382aafbSBarry Smith $        ...
2201d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2202d382aafbSBarry Smith You must instead have
2203d382aafbSBarry Smith $      PetscInt row(1),col(1)
2204d382aafbSBarry Smith $      PetscScalar val(1)
2205d382aafbSBarry Smith $        ...
2206d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2207d382aafbSBarry Smith 
2208d382aafbSBarry Smith 
2209d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2210d382aafbSBarry Smith 
2211d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2212d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2213d382aafbSBarry Smith 
2214d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2215d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2216d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2217d382aafbSBarry Smith 
2218d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2219e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2220d382aafbSBarry Smith 
2221d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2222d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2223d382aafbSBarry Smith 
2224d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2225d382aafbSBarry Smith      automatically by "make allfortranstubs".
2226d382aafbSBarry Smith 
2227e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2228d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2229d382aafbSBarry Smith      include their predecessors
2230d382aafbSBarry Smith 
2231d382aafbSBarry Smith     Level: beginner
2232d382aafbSBarry Smith 
2233d382aafbSBarry Smith M*/
2234d382aafbSBarry Smith 
22357087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
22367087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
22377087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
22387087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
22397087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
22407087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2241d382aafbSBarry Smith 
22427087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
22437087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
22447087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
22457087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
22467087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2247d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
22487087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22497087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22507087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22517087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22527087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22537087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22547087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
22559b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2256d382aafbSBarry Smith 
22577087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22587087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2259d382aafbSBarry Smith 
226076bdecfbSBarry Smith /*J
2261d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2262d382aafbSBarry Smith        with an optional dynamic library name, for example
2263d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2264d382aafbSBarry Smith 
2265d382aafbSBarry Smith    Level: beginner
2266d382aafbSBarry Smith 
2267e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2268d382aafbSBarry Smith    with the option --download-sprng
2269d382aafbSBarry Smith 
2270d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
227176bdecfbSBarry Smith J*/
2272d382aafbSBarry Smith #define PetscRandomType char*
2273d382aafbSBarry Smith #define PETSCRAND       "rand"
2274d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2275d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2276d382aafbSBarry Smith 
2277d382aafbSBarry Smith /* Logging support */
22787087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2279d382aafbSBarry Smith 
22807087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2281d382aafbSBarry Smith 
2282d382aafbSBarry Smith /*S
2283d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2284d382aafbSBarry Smith 
2285d382aafbSBarry Smith    Level: intermediate
2286d382aafbSBarry Smith 
2287d382aafbSBarry Smith   Concepts: random numbers
2288d382aafbSBarry Smith 
2289d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2290d382aafbSBarry Smith S*/
2291d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2292d382aafbSBarry Smith 
2293d382aafbSBarry Smith /* Dynamic creation and loading functions */
2294d382aafbSBarry Smith extern PetscFList PetscRandomList;
2295ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2296d382aafbSBarry Smith 
22977087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22987087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22997087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
23007087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
23017087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
23027087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
23037087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
23047087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2305d382aafbSBarry Smith 
2306d382aafbSBarry Smith /*MC
2307d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2308d382aafbSBarry Smith 
2309d382aafbSBarry Smith   Synopsis:
23101890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2311d382aafbSBarry Smith 
2312d382aafbSBarry Smith   Not Collective
2313d382aafbSBarry Smith 
2314d382aafbSBarry Smith   Input Parameters:
2315d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2316d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2317d382aafbSBarry Smith . func_name   - The name of routine to create method context
2318d382aafbSBarry Smith - create_func - The creation routine itself
2319d382aafbSBarry Smith 
2320d382aafbSBarry Smith   Notes:
2321d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2322d382aafbSBarry Smith 
2323d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2324d382aafbSBarry Smith 
2325d382aafbSBarry Smith   Sample usage:
2326d382aafbSBarry Smith .vb
2327d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2328d382aafbSBarry Smith .ve
2329d382aafbSBarry Smith 
2330d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2331d382aafbSBarry Smith .vb
2332d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2333d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2334d382aafbSBarry Smith .ve
2335d382aafbSBarry Smith    or at runtime via the option
2336d382aafbSBarry Smith .vb
2337d382aafbSBarry Smith     -random_type my_random_name
2338d382aafbSBarry Smith .ve
2339d382aafbSBarry Smith 
2340d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2341d382aafbSBarry Smith 
2342d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2343d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2344d382aafbSBarry Smith 
2345d382aafbSBarry Smith   Level: advanced
2346d382aafbSBarry Smith 
2347d382aafbSBarry Smith .keywords: PetscRandom, register
2348d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2349d382aafbSBarry Smith M*/
2350d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2351d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2352d382aafbSBarry Smith #else
2353d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2354d382aafbSBarry Smith #endif
2355d382aafbSBarry Smith 
23567087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23577087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23587087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23597087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23607087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23617087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23627087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23637087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2364fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2365d382aafbSBarry Smith 
23667087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23677087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23687087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23697087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23707087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23717087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23727087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2373d382aafbSBarry Smith 
23747087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23757087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23767087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23777087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23787087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23797087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23807087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23817087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23827087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23837087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23847087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23857087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23867087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2387d382aafbSBarry Smith 
2388d382aafbSBarry Smith /*
2389d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2390d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2391d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2392d382aafbSBarry Smith   PetscBinarySeek().
2393d382aafbSBarry Smith */
2394d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2395d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2396d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2397d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2398d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2399d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2400d382aafbSBarry Smith 
2401d382aafbSBarry Smith /*E
2402d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2403d382aafbSBarry Smith 
2404d382aafbSBarry Smith   Level: advanced
2405d382aafbSBarry Smith 
2406d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2407d382aafbSBarry Smith E*/
2408d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
24097087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
24107087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
241146090da6SBarry Smith extern PetscErrorCode  PetscByteSwap(void *,PetscDataType,PetscInt);
2412d382aafbSBarry Smith 
24137087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
24147087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
24157087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
24167087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
24177087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
24187087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2419d382aafbSBarry Smith 
24207087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
24217087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
24227087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
24237087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
24247087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2425d382aafbSBarry Smith 
24267087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2427d382aafbSBarry Smith 
2428d382aafbSBarry Smith /*E
2429d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2430d382aafbSBarry Smith 
2431d382aafbSBarry Smith   Level: beginner
2432d382aafbSBarry Smith 
2433d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2434d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2435d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2436d382aafbSBarry Smith E*/
243711f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2438d382aafbSBarry Smith 
2439d382aafbSBarry Smith /*MC
2440d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2441d382aafbSBarry Smith 
2442d382aafbSBarry Smith     Level: beginner
2443d382aafbSBarry Smith 
2444d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2445eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2446eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2447d382aafbSBarry Smith 
2448d382aafbSBarry Smith M*/
2449d382aafbSBarry Smith 
2450d382aafbSBarry Smith /*MC
2451d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2452d382aafbSBarry Smith                 value into that location
2453d382aafbSBarry Smith 
2454d382aafbSBarry Smith     Level: beginner
2455d382aafbSBarry Smith 
2456d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2457eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2458eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2459d382aafbSBarry Smith 
2460d382aafbSBarry Smith M*/
2461d382aafbSBarry Smith 
2462d382aafbSBarry Smith /*MC
2463d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2464d382aafbSBarry Smith 
2465d382aafbSBarry Smith     Level: beginner
2466d382aafbSBarry Smith 
2467d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2468d382aafbSBarry Smith 
2469d382aafbSBarry Smith M*/
2470d382aafbSBarry Smith 
2471d382aafbSBarry Smith /*S
2472d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2473d382aafbSBarry Smith 
2474d382aafbSBarry Smith    Level: advanced
2475d382aafbSBarry Smith 
2476d382aafbSBarry Smith    Concepts: communicator, create
2477d382aafbSBarry Smith S*/
2478d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2479d382aafbSBarry Smith 
2480d382aafbSBarry Smith struct _n_PetscSubcomm {
2481d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2482d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2483d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2484d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2485d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2486d382aafbSBarry Smith };
2487d382aafbSBarry Smith 
2488638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2489638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2490638faf0bSHong Zhang 
24917087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2492fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24937087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24947087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24957087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2496d382aafbSBarry Smith 
249782a7e548SBarry Smith #include <petscctable.h>
249882a7e548SBarry Smith 
2499d382aafbSBarry Smith PETSC_EXTERN_CXX_END
25006c7e564aSBarry Smith 
25019e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
25029e03d832SJed Brown #undef __FUNCT__
25039e03d832SJed Brown #define __FUNCT__ "User provided function"
25049e03d832SJed Brown 
2505d382aafbSBarry Smith #endif
2506