xref: /petsc/include/petscsys.h (revision ba282f5049c3dd2597cd524ca34c2e083b215a41)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
101cc8b206SBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include.
111cc8b206SBarry Smith    For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same
121cc8b206SBarry Smith    directory as the other PETSc include files.
13d382aafbSBarry Smith */
142c8e378dSBarry Smith #include <petscconf.h>
152c8e378dSBarry Smith #include <petscfix.h>
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
2807f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE)
2907f00807SSatish Balay #define _DEFAULT_SOURCE
3007f00807SSatish Balay #endif
31ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
32ea0fecefSShri Abhyankar #define _GNU_SOURCE
33ea0fecefSShri Abhyankar #endif
3473fca5a0SBarry Smith #endif
3573fca5a0SBarry Smith 
36d382aafbSBarry Smith /* ========================================================================== */
37d382aafbSBarry Smith /*
382c280183SJed Brown    This facilitates using the C version of PETSc from C++ and the C++ version from C.
39d382aafbSBarry Smith */
401ec50b02SJed Brown #if defined(__cplusplus)
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
421ec50b02SJed Brown #else
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
441ec50b02SJed Brown #endif
45d382aafbSBarry Smith 
46c5e4d11fSDmitry Karpeev /* ========================================================================== */
47c5e4d11fSDmitry Karpeev /*
48c5e4d11fSDmitry Karpeev    Since PETSc manages its own extern "C" handling users should never include PETSc include
491cc8b206SBarry Smith    files within extern "C". This will generate a compiler error if a user does put the include
501cc8b206SBarry Smith    file within an extern "C".
51c5e4d11fSDmitry Karpeev */
52c5e4d11fSDmitry Karpeev #if defined(__cplusplus)
53c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double);
54c5e4d11fSDmitry Karpeev #endif
55c5e4d11fSDmitry Karpeev 
56ed938b00SJed Brown #if defined(__cplusplus)
57ed938b00SJed Brown #  define PETSC_RESTRICT PETSC_CXX_RESTRICT
58ed938b00SJed Brown #else
59ed938b00SJed Brown #  define PETSC_RESTRICT PETSC_C_RESTRICT
60ed938b00SJed Brown #endif
61ed938b00SJed Brown 
62ed938b00SJed Brown #if defined(__cplusplus)
63ed938b00SJed Brown #  define PETSC_STATIC_INLINE PETSC_CXX_STATIC_INLINE
64ed938b00SJed Brown #else
65ed938b00SJed Brown #  define PETSC_STATIC_INLINE PETSC_C_STATIC_INLINE
66ed938b00SJed Brown #endif
67ed938b00SJed Brown 
68ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
69014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
70014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
7121f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
7226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus)
7326703958SBarry Smith #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
7426703958SBarry Smith #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
7526703958SBarry Smith #  define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus)
77014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
78014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
7921f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
80d382aafbSBarry Smith #else
81014dd563SJed Brown #  define PETSC_DLLEXPORT
82014dd563SJed Brown #  define PETSC_DLLIMPORT
8321f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
84014dd563SJed Brown #endif
85014dd563SJed Brown 
86014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
87014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
88014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
89014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
90014dd563SJed Brown #endif
91014dd563SJed Brown 
921cc8b206SBarry Smith /*
931cc8b206SBarry Smith     Functions tagged with PETSC_EXTERN in the header files are
941cc8b206SBarry Smith   always defined as extern "C" when compiled with C++ so they may be
951cc8b206SBarry Smith   used from C and are always visible in the shared libraries
961cc8b206SBarry Smith */
972c280183SJed Brown #if defined(__cplusplus)
98014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
99638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
10021f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL
101014dd563SJed Brown #else
102014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
103638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
1046258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL
105d382aafbSBarry Smith #endif
10627710113SBarry Smith 
1072c8e378dSBarry Smith #include <petscversion.h>
108301d30feSBarry Smith #define PETSC_AUTHOR_INFO  "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
109d382aafbSBarry Smith 
110d382aafbSBarry Smith /* ========================================================================== */
111d382aafbSBarry Smith 
112d382aafbSBarry Smith /*
113d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
114d382aafbSBarry Smith 
115d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
116d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
117d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
118d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
119d382aafbSBarry Smith     mpicxx.h directly in their code
120d382aafbSBarry Smith */
121fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX)
122d382aafbSBarry Smith #  define MPICH_SKIP_MPICXX 1
123fa9e63e2SJed Brown #endif
124fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX)
125d382aafbSBarry Smith #  define OMPI_SKIP_MPICXX 1
126fa9e63e2SJed Brown #endif
127076e11b5SSatish Balay #if !defined(OMPI_WANT_MPI_INTERFACE_WARNING)
128076e11b5SSatish Balay #  define OMPI_WANT_MPI_INTERFACE_WARNING 0
129076e11b5SSatish Balay #endif
1302c8e378dSBarry Smith #include <mpi.h>
13165013866SBarry Smith 
132d382aafbSBarry Smith /*
133a7886beaSBarry Smith    Perform various sanity checks that the correct mpi.h is being included at compile time.
134a7886beaSBarry Smith    This usually happens because
135a7886beaSBarry Smith       * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or
136a7886beaSBarry Smith       * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler
137a7886beaSBarry Smith */
138a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI)
139a7886beaSBarry Smith #  if !defined(__MPIUNI_H)
140a7886beaSBarry Smith #    error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h"
141a7886beaSBarry Smith #  endif
14241f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION)
14341f4af4cSSatish Balay #  if !defined(I_MPI_NUMVERSION)
14441f4af4cSSatish Balay #    error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h"
14541f4af4cSSatish Balay #  elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION
14641f4af4cSSatish Balay #    error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version"
14741f4af4cSSatish Balay #  endif
14841f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION)
14941f4af4cSSatish Balay #  if !defined(MVAPICH2_NUMVERSION)
15041f4af4cSSatish Balay #    error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h"
15141f4af4cSSatish Balay #  elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION
15241f4af4cSSatish Balay #    error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version"
15341f4af4cSSatish Balay #  endif
154a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION)
15541f4af4cSSatish Balay #  if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION)
156a7886beaSBarry Smith #    error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h"
157ca70f86eSJed Brown #  elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000)
158a7886beaSBarry Smith #    error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version"
159a7886beaSBarry Smith #  endif
160a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION)
161a7886beaSBarry Smith #  if !defined(OMPI_MAJOR_VERSION)
162a7886beaSBarry Smith #    error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h"
163ca70f86eSJed Brown #  elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION)
164c3ac57cfSSatish Balay #    error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version"
165a7886beaSBarry Smith #  endif
16641f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION)
16741f4af4cSSatish Balay #  error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant"
168a7886beaSBarry Smith #endif
169a7886beaSBarry Smith 
170a7886beaSBarry Smith /*
1712981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
172d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
173d382aafbSBarry Smith */
174d382aafbSBarry Smith #include <stdio.h>
175d382aafbSBarry Smith 
176d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
177d382aafbSBarry Smith #if !defined(MPIAPI)
178d382aafbSBarry Smith #define MPIAPI
179d382aafbSBarry Smith #endif
180d382aafbSBarry Smith 
1811cc8b206SBarry Smith /*
1821cc8b206SBarry Smith    Support for Clang (>=3.2) matching type tag arguments with void* buffer types.
1831cc8b206SBarry Smith    This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine
1841cc8b206SBarry Smith    does not match the actual type of the argument being passed in
1851cc8b206SBarry Smith */
186c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true)
187894dd566SJed Brown #  if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype)
188894dd566SJed Brown #    define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno)))
1898ad47952SJed Brown #    define PetscAttrMPITypeTag(type)                 __attribute__((type_tag_for_datatype(MPI,type)))
1908ad47952SJed Brown #    define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible)))
191894dd566SJed Brown #  endif
192894dd566SJed Brown #endif
193894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType)
194894dd566SJed Brown #  define PetscAttrMPIPointerWithType(bufno,typeno)
1958ad47952SJed Brown #  define PetscAttrMPITypeTag(type)
1968ad47952SJed Brown #  define PetscAttrMPITypeTagLayoutCompatible(type)
197894dd566SJed Brown #endif
198b3506946SBarry Smith 
199d382aafbSBarry Smith /*MC
2001957e957SBarry Smith     PetscErrorCode - datatype used for return error code from almost all PETSc functions
201d382aafbSBarry Smith 
202d382aafbSBarry Smith     Level: beginner
203d382aafbSBarry Smith 
204d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
205d382aafbSBarry Smith M*/
206d382aafbSBarry Smith typedef int PetscErrorCode;
207d382aafbSBarry Smith 
208d382aafbSBarry Smith /*MC
209d382aafbSBarry Smith 
210503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
211d382aafbSBarry Smith 
2121957e957SBarry Smith     Notes: Use PetscClassIdRegister() to obtain a new value for a new class being created. Usually
2131957e957SBarry Smith          XXXInitializePackage() calls it for each class it defines.
2141957e957SBarry Smith 
2151957e957SBarry Smith     Developer Notes: Internal integer stored in the _p_PetscObject data structure.
2161957e957SBarry Smith          These are all computed by an offset from the lowest one, PETSC_SMALLEST_CLASSID.
2171957e957SBarry Smith 
2181957e957SBarry Smith     Level: developer
219d382aafbSBarry Smith 
2200700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
221d382aafbSBarry Smith M*/
2220700a824SBarry Smith typedef int PetscClassId;
223d382aafbSBarry Smith 
224d382aafbSBarry Smith 
225d382aafbSBarry Smith /*MC
226d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
227d382aafbSBarry Smith 
228d382aafbSBarry Smith     Level: intermediate
229d382aafbSBarry Smith 
230d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
2313b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
232d382aafbSBarry Smith 
2334dc2109aSBarry Smith     PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
2342981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
235d382aafbSBarry Smith 
2361cc8b206SBarry Smith .seealso: PetscBLASInt, PetscInt, PetscMPIIntCast()
237d382aafbSBarry Smith 
238d382aafbSBarry Smith M*/
239d382aafbSBarry Smith typedef int PetscMPIInt;
240d382aafbSBarry Smith 
241d382aafbSBarry Smith /*MC
242d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
243d382aafbSBarry Smith 
244d382aafbSBarry Smith     Level: intermediate
245d382aafbSBarry Smith 
246d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
247d382aafbSBarry Smith M*/
248d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
2495a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum);
250d382aafbSBarry Smith 
251fab38c73SJed Brown #if defined(PETSC_HAVE_STDINT_H)
252fab38c73SJed Brown #include <stdint.h>
253fab38c73SJed Brown #endif
254a05e1a72SSatish Balay #if defined (PETSC_HAVE_INTTYPES_H)
25513e758fdSSatish Balay #define __STDC_FORMAT_MACROS /* required for using PRId64 from c++ */
256a05e1a72SSatish Balay #include <inttypes.h>
25737354ed4SSatish Balay # if !defined(PRId64)
25837354ed4SSatish Balay # define PRId64 "ld"
25937354ed4SSatish Balay # endif
260a05e1a72SSatish Balay #endif
261fab38c73SJed Brown 
26299a4b90dSDave May typedef short PetscShort;
26399a4b90dSDave May typedef char PetscChar;
26499a4b90dSDave May typedef float PetscFloat;
26599a4b90dSDave May 
266d382aafbSBarry Smith /*MC
267d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2683b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
269d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
270d382aafbSBarry Smith 
271390e1bf2SBarry Smith 
272390e1bf2SBarry Smith    Notes: For MPI calls that require datatypes, use MPIU_INT as the datatype for PetscInt. It will automatically work correctly regardless of
273390e1bf2SBarry Smith           the size of PetscInt
274390e1bf2SBarry Smith 
275d382aafbSBarry Smith    Level: intermediate
276d382aafbSBarry Smith 
277d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
278d382aafbSBarry Smith M*/
27937354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */
280bafee8b4SSatish Balay typedef int64_t PetscInt64;
281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T
282a05e1a72SSatish Balay # define PetscInt64_FMT PRId64
283fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8)
284bafee8b4SSatish Balay typedef long long PetscInt64;
285bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT
286a05e1a72SSatish Balay # define PetscInt64_FMT "lld"
287f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
288bafee8b4SSatish Balay typedef __int64 PetscInt64;
289bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T
290a05e1a72SSatish Balay # define PetscInt64_FMT "ld"
291236ed0a3SSatish Balay #else
292bafee8b4SSatish Balay #error "cannot determine PetscInt64 type"
293236ed0a3SSatish Balay #endif
294d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
295bafee8b4SSatish Balay typedef PetscInt64 PetscInt;
296bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64
297a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT
298d382aafbSBarry Smith #else
299d382aafbSBarry Smith typedef int PetscInt;
300d382aafbSBarry Smith #define MPIU_INT MPI_INT
301a05e1a72SSatish Balay #define PetscInt_FMT "d"
302d382aafbSBarry Smith #endif
303d382aafbSBarry Smith 
304702bc34aSSatish Balay /*MC
305702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
306702bc34aSSatish Balay 
307702bc34aSSatish Balay     Level: intermediate
308702bc34aSSatish Balay 
309702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
310702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
311702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
312702bc34aSSatish Balay 
313c5df96a5SBarry Smith     PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
3142981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
315702bc34aSSatish Balay 
3162981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
317702bc34aSSatish Balay      if you run ./configure with the option
318149a18a2SBarry Smith      --with-blaslapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
3192981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
3202981ebdbSBarry Smith 
321390e1bf2SBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with
322390e1bf2SBarry Smith         --known-64-bit-blas-indices
323390e1bf2SBarry Smith 
324390e1bf2SBarry Smith         OpenBLAS can also be built to use 64 bit integers. The ./configure options --download-openblas -download-openblas-64-bit-blas-indices
325390e1bf2SBarry Smith         will build a 64 bit integer version
3262981ebdbSBarry Smith 
3272981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
328702bc34aSSatish Balay 
329702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
330702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
331702bc34aSSatish Balay 
3321cc8b206SBarry Smith .seealso: PetscMPIInt, PetscInt, PetscBLASIntCast()
333702bc34aSSatish Balay 
334702bc34aSSatish Balay M*/
335702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
336bafee8b4SSatish Balay typedef PetscInt64 PetscBLASInt;
337702bc34aSSatish Balay #else
338702bc34aSSatish Balay typedef int PetscBLASInt;
339702bc34aSSatish Balay #endif
340702bc34aSSatish Balay 
341503cfb0cSBarry Smith /*
342503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
343503cfb0cSBarry Smith */
344d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
345adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED
346d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
347adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG
348d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
349adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG
350d382aafbSBarry Smith #else
351d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
352d382aafbSBarry Smith #endif
353d382aafbSBarry Smith 
354d382aafbSBarry Smith /*
355d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
356d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
357d382aafbSBarry Smith */
358014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
359d382aafbSBarry Smith 
360d382aafbSBarry Smith /*
361d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
362d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
363d382aafbSBarry Smith */
364014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
365d382aafbSBarry Smith 
366d382aafbSBarry Smith /*MC
367d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
368d382aafbSBarry Smith 
369d382aafbSBarry Smith     Synopsis:
370aaa7dc30SBarry Smith     #include <petscsys.h>
371ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
372d382aafbSBarry Smith 
373eca87e8dSBarry Smith     Not Collective
374eca87e8dSBarry Smith 
375d382aafbSBarry Smith     Input Parameters:
376d382aafbSBarry Smith .   cond - condition or expression
377d382aafbSBarry Smith 
378d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
379d382aafbSBarry Smith     branch is unlikely.
380d382aafbSBarry Smith 
381d382aafbSBarry Smith     Level: advanced
382d382aafbSBarry Smith 
383d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
384d382aafbSBarry Smith M*/
385d382aafbSBarry Smith 
386d382aafbSBarry Smith /*MC
387d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
388d382aafbSBarry Smith 
389d382aafbSBarry Smith     Synopsis:
390aaa7dc30SBarry Smith     #include <petscsys.h>
39123072422SBarry Smith     PetscBool  PetscLikely(PetscBool  cond)
392d382aafbSBarry Smith 
393eca87e8dSBarry Smith     Not Collective
394eca87e8dSBarry Smith 
395d382aafbSBarry Smith     Input Parameters:
396d382aafbSBarry Smith .   cond - condition or expression
397d382aafbSBarry Smith 
398d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
399d382aafbSBarry Smith     branch is likely.
400d382aafbSBarry Smith 
401d382aafbSBarry Smith     Level: advanced
402d382aafbSBarry Smith 
403d382aafbSBarry Smith .seealso: PetscUnlikely()
404d382aafbSBarry Smith M*/
405d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
406d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
407d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
408d382aafbSBarry Smith #else
409cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
410cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
411d382aafbSBarry Smith #endif
412d382aafbSBarry Smith 
413d382aafbSBarry Smith /*
414d382aafbSBarry Smith     Declare extern C stuff after including external header files
415d382aafbSBarry Smith */
416d382aafbSBarry Smith 
417d382aafbSBarry Smith 
418d382aafbSBarry Smith /*
419d382aafbSBarry Smith        Basic PETSc constants
420d382aafbSBarry Smith */
421d382aafbSBarry Smith 
422d382aafbSBarry Smith /*E
423ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
424d382aafbSBarry Smith 
425d382aafbSBarry Smith    Level: beginner
426d382aafbSBarry Smith 
427ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
42834e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
42934e82e7dSBarry Smith 
4301cc8b206SBarry Smith .seealso: PETSC_TRUE, PETSC_FALSE, PetscNot()
431d382aafbSBarry Smith E*/
432ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
4336a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
4345a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool);
43570b3c8c7SBarry Smith 
4368b49ba18SBarry Smith /*
437390e1bf2SBarry Smith     Defines elementary mathematics functions and constants.
4388b49ba18SBarry Smith */
4398b49ba18SBarry Smith #include <petscmath.h>
4408b49ba18SBarry Smith 
44170b3c8c7SBarry Smith /*E
44270b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
44370b3c8c7SBarry Smith 
44470b3c8c7SBarry Smith    Level: beginner
44570b3c8c7SBarry Smith 
44670b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
44770b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
44870b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
44970b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
45070b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
45170b3c8c7SBarry Smith 
45270b3c8c7SBarry Smith E*/
45370b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
4546a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
455d382aafbSBarry Smith 
456d382aafbSBarry Smith /*MC
457ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
458d382aafbSBarry Smith 
459d382aafbSBarry Smith     Level: beginner
460d382aafbSBarry Smith 
461d382aafbSBarry Smith     Note: Zero integer
462d382aafbSBarry Smith 
463ace3abfcSBarry Smith .seealso: PetscBool, PETSC_TRUE
464d382aafbSBarry Smith M*/
465d382aafbSBarry Smith 
466d382aafbSBarry Smith /*MC
467ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
468d382aafbSBarry Smith 
469d382aafbSBarry Smith     Level: beginner
470d382aafbSBarry Smith 
471d382aafbSBarry Smith     Note: Nonzero integer
472d382aafbSBarry Smith 
473ace3abfcSBarry Smith .seealso: PetscBool, PETSC_FALSE
474d382aafbSBarry Smith M*/
475d382aafbSBarry Smith 
476d382aafbSBarry Smith /*MC
4770298fd71SBarry Smith     PETSC_IGNORE - same as NULL, means PETSc will ignore this argument
478d382aafbSBarry Smith 
479d382aafbSBarry Smith    Level: beginner
480d382aafbSBarry Smith 
481d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
482d382aafbSBarry Smith           some default
483d382aafbSBarry Smith 
484d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
485d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
486d382aafbSBarry Smith 
487d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
488d382aafbSBarry Smith 
489d382aafbSBarry Smith M*/
4900298fd71SBarry Smith #define PETSC_IGNORE         NULL
491d382aafbSBarry Smith 
492c528d872SBarry Smith /* This is deprecated */
493c528d872SBarry Smith #define PETSC_NULL NULL
494c528d872SBarry Smith 
495d382aafbSBarry Smith /*MC
496557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
497557d4da8SBarry Smith        where you wish PETSc to use the default.
498557d4da8SBarry Smith 
499557d4da8SBarry Smith    Level: beginner
500557d4da8SBarry Smith 
501557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
502557d4da8SBarry Smith 
503557d4da8SBarry Smith M*/
504557d4da8SBarry Smith #define PETSC_DECIDE  -1
505557d4da8SBarry Smith 
506557d4da8SBarry Smith /*MC
507d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
508d382aafbSBarry Smith        where you wish PETSc to compute the required value.
509d382aafbSBarry Smith 
510d382aafbSBarry Smith    Level: beginner
511d382aafbSBarry Smith 
512557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
513557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
514557d4da8SBarry Smith 
5150298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes()
516d382aafbSBarry Smith 
517d382aafbSBarry Smith M*/
518d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
519d382aafbSBarry Smith 
520d382aafbSBarry Smith /*MC
521557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
522557d4da8SBarry Smith        where you wish PETSc to use the default.
523557d4da8SBarry Smith 
524557d4da8SBarry Smith    Level: beginner
525557d4da8SBarry Smith 
5262d80014bSBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL.
527557d4da8SBarry Smith 
5280298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE
529557d4da8SBarry Smith 
530557d4da8SBarry Smith M*/
531557d4da8SBarry Smith #define PETSC_DEFAULT  -2
532557d4da8SBarry Smith 
533557d4da8SBarry Smith /*MC
534d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
535d382aafbSBarry Smith            all the processs that PETSc knows about.
536d382aafbSBarry Smith 
537d382aafbSBarry Smith    Level: beginner
538d382aafbSBarry Smith 
539d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
540d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
541d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
542a990b902SBarry Smith           PetscInitialize(), but after MPI_Init() has been called.
543a990b902SBarry Smith 
544a990b902SBarry Smith           The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize()
545a990b902SBarry Smith           is called because it may not have a valid value yet.
546d382aafbSBarry Smith 
547d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
548d382aafbSBarry Smith 
549d382aafbSBarry Smith M*/
550014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
551d382aafbSBarry Smith 
552d382aafbSBarry Smith /*MC
553503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
554d382aafbSBarry Smith 
555d382aafbSBarry Smith    Level: beginner
556d382aafbSBarry Smith 
557a990b902SBarry Smith    Notes: Do not USE/access or set this variable before PetscInitialize() has been called.
558a990b902SBarry Smith 
559d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
560d382aafbSBarry Smith 
561d382aafbSBarry Smith M*/
562d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
563d382aafbSBarry Smith 
564d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI;
565014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
566014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
567014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
5684cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize;
56982f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize;
570d382aafbSBarry Smith 
571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
574d382aafbSBarry Smith 
575d382aafbSBarry Smith /*MC
57695dccacaSBarry Smith    PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this
577d382aafbSBarry Smith 
578eca87e8dSBarry Smith    Synopsis:
579aaa7dc30SBarry Smith     #include <petscsys.h>
580eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
581eca87e8dSBarry Smith 
582eca87e8dSBarry Smith    Not Collective
583eca87e8dSBarry Smith 
584d382aafbSBarry Smith    Input Parameter:
585d382aafbSBarry Smith .  m - number of bytes to allocate
586d382aafbSBarry Smith 
587d382aafbSBarry Smith    Output Parameter:
588d382aafbSBarry Smith .  result - memory allocated
589d382aafbSBarry Smith 
590d382aafbSBarry Smith    Level: beginner
591d382aafbSBarry Smith 
59249d7da52SJed Brown    Notes:
59349d7da52SJed Brown    Memory is always allocated at least double aligned
594d382aafbSBarry Smith 
59549d7da52SJed Brown    It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree().
596d382aafbSBarry Smith 
597d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
598d382aafbSBarry Smith 
599d382aafbSBarry Smith   Concepts: memory allocation
600d382aafbSBarry Smith 
601d382aafbSBarry Smith M*/
60249d7da52SJed Brown #define PetscMalloc(a,b)  ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
603d382aafbSBarry Smith 
604d382aafbSBarry Smith /*MC
6053221ece2SMatthew G. Knepley    PetscRealloc - Rellocates memory
6063221ece2SMatthew G. Knepley 
6073221ece2SMatthew G. Knepley    Synopsis:
6083221ece2SMatthew G. Knepley     #include <petscsys.h>
6093221ece2SMatthew G. Knepley    PetscErrorCode PetscRealloc(size_t m,void **result)
6103221ece2SMatthew G. Knepley 
6113221ece2SMatthew G. Knepley    Not Collective
6123221ece2SMatthew G. Knepley 
6133221ece2SMatthew G. Knepley    Input Parameters:
6143221ece2SMatthew G. Knepley +  m - number of bytes to allocate
6153221ece2SMatthew G. Knepley -  result - initial memory allocated
6163221ece2SMatthew G. Knepley 
6173221ece2SMatthew G. Knepley    Output Parameter:
6183221ece2SMatthew G. Knepley .  result - new memory allocated
6193221ece2SMatthew G. Knepley 
6203221ece2SMatthew G. Knepley    Level: developer
6213221ece2SMatthew G. Knepley 
6223221ece2SMatthew G. Knepley    Notes:
6233221ece2SMatthew G. Knepley    Memory is always allocated at least double aligned
6243221ece2SMatthew G. Knepley 
6253221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew()
6263221ece2SMatthew G. Knepley 
6273221ece2SMatthew G. Knepley   Concepts: memory allocation
6283221ece2SMatthew G. Knepley 
6293221ece2SMatthew G. Knepley M*/
6303221ece2SMatthew G. Knepley #define PetscRealloc(a,b)  ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
6313221ece2SMatthew G. Knepley 
6323221ece2SMatthew G. Knepley /*MC
633503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
634d382aafbSBarry Smith 
635d382aafbSBarry Smith    Synopsis:
636aaa7dc30SBarry Smith     #include <petscsys.h>
637d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
638d382aafbSBarry Smith 
639eca87e8dSBarry Smith    Not Collective
640eca87e8dSBarry Smith 
641eca87e8dSBarry Smith    Input Parameters:
642eca87e8dSBarry Smith .  addr - address to align (any pointer type)
643eca87e8dSBarry Smith 
644d382aafbSBarry Smith    Level: developer
645d382aafbSBarry Smith 
646d382aafbSBarry Smith .seealso: PetscMallocAlign()
647d382aafbSBarry Smith 
648d382aafbSBarry Smith   Concepts: memory allocation
649d382aafbSBarry Smith M*/
650d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
651d382aafbSBarry Smith 
652d382aafbSBarry Smith /*MC
653785e854fSJed Brown    PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN
654d382aafbSBarry Smith 
655eca87e8dSBarry Smith    Synopsis:
656aaa7dc30SBarry Smith     #include <petscsys.h>
657785e854fSJed Brown    PetscErrorCode PetscMalloc1(size_t m1,type **r1)
658785e854fSJed Brown 
659785e854fSJed Brown    Not Collective
660785e854fSJed Brown 
661785e854fSJed Brown    Input Parameter:
662390e1bf2SBarry Smith .  m1 - number of elements to allocate  (may be zero)
663785e854fSJed Brown 
664785e854fSJed Brown    Output Parameter:
665785e854fSJed Brown .  r1 - memory allocated in first chunk
666785e854fSJed Brown 
667390e1bf2SBarry Smith    Note: This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not
668390e1bf2SBarry Smith          multiply the number of elements requested by the sizeof() the type. For example use
669390e1bf2SBarry Smith $  PetscInt *id;
670390e1bf2SBarry Smith $  PetscMalloc1(10,&id);
671390e1bf2SBarry Smith         not
672390e1bf2SBarry Smith $  PetscInt *id;
673390e1bf2SBarry Smith $  PetscMalloc1(10*sizeof(PetscInt),&id);
674390e1bf2SBarry Smith 
675390e1bf2SBarry Smith         Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed.
676390e1bf2SBarry Smith 
677390e1bf2SBarry Smith    Level: beginner
678785e854fSJed Brown 
6791795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2()
680785e854fSJed Brown 
681785e854fSJed Brown   Concepts: memory allocation
682785e854fSJed Brown 
683785e854fSJed Brown M*/
684*ba282f50SJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1))
685785e854fSJed Brown 
686785e854fSJed Brown /*MC
6871795a4d1SJed Brown    PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN
6881795a4d1SJed Brown 
6891795a4d1SJed Brown    Synopsis:
690aaa7dc30SBarry Smith     #include <petscsys.h>
6911795a4d1SJed Brown    PetscErrorCode PetscCalloc1(size_t m1,type **r1)
6921795a4d1SJed Brown 
6931795a4d1SJed Brown    Not Collective
6941795a4d1SJed Brown 
6951795a4d1SJed Brown    Input Parameter:
6961795a4d1SJed Brown .  m1 - number of elements to allocate in 1st chunk  (may be zero)
6971795a4d1SJed Brown 
6981795a4d1SJed Brown    Output Parameter:
6991795a4d1SJed Brown .  r1 - memory allocated in first chunk
7001795a4d1SJed Brown 
701390e1bf2SBarry Smith    Notes: see PetsMalloc1() for more details on usage.
702390e1bf2SBarry Smith 
703390e1bf2SBarry Smith    Level: beginner
7041795a4d1SJed Brown 
7051795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2()
7061795a4d1SJed Brown 
7071795a4d1SJed Brown   Concepts: memory allocation
7081795a4d1SJed Brown 
7091795a4d1SJed Brown M*/
710*ba282f50SJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1))
7111795a4d1SJed Brown 
7121795a4d1SJed Brown /*MC
713dcca6d9dSJed Brown    PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN
714d382aafbSBarry Smith 
715eca87e8dSBarry Smith    Synopsis:
716aaa7dc30SBarry Smith     #include <petscsys.h>
717dcca6d9dSJed Brown    PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2)
718eca87e8dSBarry Smith 
719eca87e8dSBarry Smith    Not Collective
720eca87e8dSBarry Smith 
721d382aafbSBarry Smith    Input Parameter:
722d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
723dcca6d9dSJed Brown -  m2 - number of elements to allocate in 2nd chunk  (may be zero)
724d382aafbSBarry Smith 
725d382aafbSBarry Smith    Output Parameter:
726d382aafbSBarry Smith +  r1 - memory allocated in first chunk
727d382aafbSBarry Smith -  r2 - memory allocated in second chunk
728d382aafbSBarry Smith 
729d382aafbSBarry Smith    Level: developer
730d382aafbSBarry Smith 
7311795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2()
732d382aafbSBarry Smith 
733d382aafbSBarry Smith   Concepts: memory allocation
734d382aafbSBarry Smith 
735d382aafbSBarry Smith M*/
736*ba282f50SJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2))
737d382aafbSBarry Smith 
738d382aafbSBarry Smith /*MC
7391795a4d1SJed Brown    PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN
740d382aafbSBarry Smith 
741eca87e8dSBarry Smith    Synopsis:
742aaa7dc30SBarry Smith     #include <petscsys.h>
7431795a4d1SJed Brown    PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2)
744eca87e8dSBarry Smith 
745eca87e8dSBarry Smith    Not Collective
746eca87e8dSBarry Smith 
747d382aafbSBarry Smith    Input Parameter:
748d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
7491795a4d1SJed Brown -  m2 - number of elements to allocate in 2nd chunk  (may be zero)
7501795a4d1SJed Brown 
7511795a4d1SJed Brown    Output Parameter:
7521795a4d1SJed Brown +  r1 - memory allocated in first chunk
7531795a4d1SJed Brown -  r2 - memory allocated in second chunk
7541795a4d1SJed Brown 
7551795a4d1SJed Brown    Level: developer
7561795a4d1SJed Brown 
7571795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2()
7581795a4d1SJed Brown 
7591795a4d1SJed Brown   Concepts: memory allocation
7601795a4d1SJed Brown M*/
761*ba282f50SJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2))
7621795a4d1SJed Brown 
7631795a4d1SJed Brown /*MC
764dcca6d9dSJed Brown    PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN
765d382aafbSBarry Smith 
766d382aafbSBarry Smith    Synopsis:
767aaa7dc30SBarry Smith     #include <petscsys.h>
768dcca6d9dSJed Brown    PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
769d382aafbSBarry Smith 
770d382aafbSBarry Smith    Not Collective
771d382aafbSBarry Smith 
772d382aafbSBarry Smith    Input Parameter:
773d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
774d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
775dcca6d9dSJed Brown -  m3 - number of elements to allocate in 3rd chunk  (may be zero)
776d382aafbSBarry Smith 
777d382aafbSBarry Smith    Output Parameter:
778d382aafbSBarry Smith +  r1 - memory allocated in first chunk
779d382aafbSBarry Smith .  r2 - memory allocated in second chunk
780d382aafbSBarry Smith -  r3 - memory allocated in third chunk
781d382aafbSBarry Smith 
782d382aafbSBarry Smith    Level: developer
783d382aafbSBarry Smith 
7841795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3()
785d382aafbSBarry Smith 
786d382aafbSBarry Smith   Concepts: memory allocation
787d382aafbSBarry Smith 
788d382aafbSBarry Smith M*/
789*ba282f50SJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3))
790d382aafbSBarry Smith 
791d382aafbSBarry Smith /*MC
7921795a4d1SJed Brown    PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
793d382aafbSBarry Smith 
794eca87e8dSBarry Smith    Synopsis:
795aaa7dc30SBarry Smith     #include <petscsys.h>
7961795a4d1SJed Brown    PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
797eca87e8dSBarry Smith 
798eca87e8dSBarry Smith    Not Collective
799eca87e8dSBarry Smith 
800d382aafbSBarry Smith    Input Parameter:
801d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
802d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
8031795a4d1SJed Brown -  m3 - number of elements to allocate in 3rd chunk  (may be zero)
8041795a4d1SJed Brown 
8051795a4d1SJed Brown    Output Parameter:
8061795a4d1SJed Brown +  r1 - memory allocated in first chunk
8071795a4d1SJed Brown .  r2 - memory allocated in second chunk
8081795a4d1SJed Brown -  r3 - memory allocated in third chunk
8091795a4d1SJed Brown 
8101795a4d1SJed Brown    Level: developer
8111795a4d1SJed Brown 
8121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3()
8131795a4d1SJed Brown 
8141795a4d1SJed Brown   Concepts: memory allocation
8151795a4d1SJed Brown M*/
816*ba282f50SJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3))
8171795a4d1SJed Brown 
8181795a4d1SJed Brown /*MC
819dcca6d9dSJed Brown    PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN
820d382aafbSBarry Smith 
821d382aafbSBarry Smith    Synopsis:
822aaa7dc30SBarry Smith     #include <petscsys.h>
823dcca6d9dSJed Brown    PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
824d382aafbSBarry Smith 
825d382aafbSBarry Smith    Not Collective
826d382aafbSBarry Smith 
827d382aafbSBarry Smith    Input Parameter:
828d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
829d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
830d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
831dcca6d9dSJed Brown -  m4 - number of elements to allocate in 4th chunk  (may be zero)
832d382aafbSBarry Smith 
833d382aafbSBarry Smith    Output Parameter:
834d382aafbSBarry Smith +  r1 - memory allocated in first chunk
835d382aafbSBarry Smith .  r2 - memory allocated in second chunk
836d382aafbSBarry Smith .  r3 - memory allocated in third chunk
837d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
838d382aafbSBarry Smith 
839d382aafbSBarry Smith    Level: developer
840d382aafbSBarry Smith 
8411795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4()
842d382aafbSBarry Smith 
843d382aafbSBarry Smith   Concepts: memory allocation
844d382aafbSBarry Smith 
845d382aafbSBarry Smith M*/
846*ba282f50SJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4))
847d382aafbSBarry Smith 
848d382aafbSBarry Smith /*MC
8491795a4d1SJed Brown    PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
850d382aafbSBarry Smith 
851eca87e8dSBarry Smith    Synopsis:
852aaa7dc30SBarry Smith     #include <petscsys.h>
8531795a4d1SJed Brown    PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
854eca87e8dSBarry Smith 
855eca87e8dSBarry Smith    Not Collective
856eca87e8dSBarry Smith 
857d382aafbSBarry Smith    Input Parameter:
858d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
859d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
860d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
8611795a4d1SJed Brown -  m4 - number of elements to allocate in 4th chunk  (may be zero)
8621795a4d1SJed Brown 
8631795a4d1SJed Brown    Output Parameter:
8641795a4d1SJed Brown +  r1 - memory allocated in first chunk
8651795a4d1SJed Brown .  r2 - memory allocated in second chunk
8661795a4d1SJed Brown .  r3 - memory allocated in third chunk
8671795a4d1SJed Brown -  r4 - memory allocated in fourth chunk
8681795a4d1SJed Brown 
8691795a4d1SJed Brown    Level: developer
8701795a4d1SJed Brown 
8711795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4()
8721795a4d1SJed Brown 
8731795a4d1SJed Brown   Concepts: memory allocation
8741795a4d1SJed Brown 
8751795a4d1SJed Brown M*/
876*ba282f50SJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4))
8771795a4d1SJed Brown 
8781795a4d1SJed Brown /*MC
879dcca6d9dSJed Brown    PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN
880d382aafbSBarry Smith 
881d382aafbSBarry Smith    Synopsis:
882aaa7dc30SBarry Smith     #include <petscsys.h>
883dcca6d9dSJed Brown    PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
884d382aafbSBarry Smith 
885d382aafbSBarry Smith    Not Collective
886d382aafbSBarry Smith 
887d382aafbSBarry Smith    Input Parameter:
888d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
889d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
890d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
891d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
892dcca6d9dSJed Brown -  m5 - number of elements to allocate in 5th chunk  (may be zero)
893d382aafbSBarry Smith 
894d382aafbSBarry Smith    Output Parameter:
895d382aafbSBarry Smith +  r1 - memory allocated in first chunk
896d382aafbSBarry Smith .  r2 - memory allocated in second chunk
897d382aafbSBarry Smith .  r3 - memory allocated in third chunk
898d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
899d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
900d382aafbSBarry Smith 
901d382aafbSBarry Smith    Level: developer
902d382aafbSBarry Smith 
9031795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5()
904d382aafbSBarry Smith 
905d382aafbSBarry Smith   Concepts: memory allocation
906d382aafbSBarry Smith 
907d382aafbSBarry Smith M*/
908*ba282f50SJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5))
909d382aafbSBarry Smith 
910d382aafbSBarry Smith /*MC
9111795a4d1SJed Brown    PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
912d382aafbSBarry Smith 
913eca87e8dSBarry Smith    Synopsis:
914aaa7dc30SBarry Smith     #include <petscsys.h>
9151795a4d1SJed Brown    PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
916eca87e8dSBarry Smith 
917eca87e8dSBarry Smith    Not Collective
918eca87e8dSBarry Smith 
919d382aafbSBarry Smith    Input Parameter:
920d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
921d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
922d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
923d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
9241795a4d1SJed Brown -  m5 - number of elements to allocate in 5th chunk  (may be zero)
9251795a4d1SJed Brown 
9261795a4d1SJed Brown    Output Parameter:
9271795a4d1SJed Brown +  r1 - memory allocated in first chunk
9281795a4d1SJed Brown .  r2 - memory allocated in second chunk
9291795a4d1SJed Brown .  r3 - memory allocated in third chunk
9301795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
9311795a4d1SJed Brown -  r5 - memory allocated in fifth chunk
9321795a4d1SJed Brown 
9331795a4d1SJed Brown    Level: developer
9341795a4d1SJed Brown 
9351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5()
9361795a4d1SJed Brown 
9371795a4d1SJed Brown   Concepts: memory allocation
9381795a4d1SJed Brown 
9391795a4d1SJed Brown M*/
940*ba282f50SJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5))
941d382aafbSBarry Smith 
942d382aafbSBarry Smith /*MC
943dcca6d9dSJed Brown    PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN
944d382aafbSBarry Smith 
945d382aafbSBarry Smith    Synopsis:
946aaa7dc30SBarry Smith     #include <petscsys.h>
947dcca6d9dSJed Brown    PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
948d382aafbSBarry Smith 
949d382aafbSBarry Smith    Not Collective
950d382aafbSBarry Smith 
951d382aafbSBarry Smith    Input Parameter:
952d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
953d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
954d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
955d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
956d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
957dcca6d9dSJed Brown -  m6 - number of elements to allocate in 6th chunk  (may be zero)
958d382aafbSBarry Smith 
959d382aafbSBarry Smith    Output Parameter:
960d382aafbSBarry Smith +  r1 - memory allocated in first chunk
961d382aafbSBarry Smith .  r2 - memory allocated in second chunk
962d382aafbSBarry Smith .  r3 - memory allocated in third chunk
963d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
964d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
965d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
966d382aafbSBarry Smith 
967d382aafbSBarry Smith    Level: developer
968d382aafbSBarry Smith 
9691795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
970d382aafbSBarry Smith 
971d382aafbSBarry Smith   Concepts: memory allocation
972d382aafbSBarry Smith 
973d382aafbSBarry Smith M*/
974*ba282f50SJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5),(m6)*sizeof(**(r6)),(r6))
975d382aafbSBarry Smith 
976d382aafbSBarry Smith /*MC
9771795a4d1SJed Brown    PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
978d382aafbSBarry Smith 
979eca87e8dSBarry Smith    Synopsis:
980aaa7dc30SBarry Smith     #include <petscsys.h>
9811795a4d1SJed Brown    PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
982eca87e8dSBarry Smith 
983eca87e8dSBarry Smith    Not Collective
984eca87e8dSBarry Smith 
985d382aafbSBarry Smith    Input Parameter:
986d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
987d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
988d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
989d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
990d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
9911795a4d1SJed Brown -  m6 - number of elements to allocate in 6th chunk  (may be zero)
9921795a4d1SJed Brown 
9931795a4d1SJed Brown    Output Parameter:
9941795a4d1SJed Brown +  r1 - memory allocated in first chunk
9951795a4d1SJed Brown .  r2 - memory allocated in second chunk
9961795a4d1SJed Brown .  r3 - memory allocated in third chunk
9971795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
9981795a4d1SJed Brown .  r5 - memory allocated in fifth chunk
9991795a4d1SJed Brown -  r6 - memory allocated in sixth chunk
10001795a4d1SJed Brown 
10011795a4d1SJed Brown    Level: developer
10021795a4d1SJed Brown 
10031795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6()
10041795a4d1SJed Brown 
10051795a4d1SJed Brown   Concepts: memory allocation
10061795a4d1SJed Brown M*/
1007*ba282f50SJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5),(m6)*sizeof(**(r6)),(r6))
10081795a4d1SJed Brown 
10091795a4d1SJed Brown /*MC
1010dcca6d9dSJed Brown    PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN
1011d382aafbSBarry Smith 
1012d382aafbSBarry Smith    Synopsis:
1013aaa7dc30SBarry Smith     #include <petscsys.h>
1014dcca6d9dSJed Brown    PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith    Not Collective
1017d382aafbSBarry Smith 
1018d382aafbSBarry Smith    Input Parameter:
1019d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
1020d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
1021d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
1022d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
1023d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
1024d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
1025dcca6d9dSJed Brown -  m7 - number of elements to allocate in 7th chunk  (may be zero)
1026d382aafbSBarry Smith 
1027d382aafbSBarry Smith    Output Parameter:
1028d382aafbSBarry Smith +  r1 - memory allocated in first chunk
1029d382aafbSBarry Smith .  r2 - memory allocated in second chunk
1030d382aafbSBarry Smith .  r3 - memory allocated in third chunk
1031d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
1032d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
1033d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
1034eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
1035d382aafbSBarry Smith 
1036d382aafbSBarry Smith    Level: developer
1037d382aafbSBarry Smith 
10381795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7()
1039d382aafbSBarry Smith 
1040d382aafbSBarry Smith   Concepts: memory allocation
1041d382aafbSBarry Smith 
1042d382aafbSBarry Smith M*/
1043*ba282f50SJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5),(m6)*sizeof(**(r6)),(r6),(m7)*sizeof(**(r7)),(r7))
1044d382aafbSBarry Smith 
1045d382aafbSBarry Smith /*MC
10461795a4d1SJed Brown    PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
10471795a4d1SJed Brown 
10481795a4d1SJed Brown    Synopsis:
1049aaa7dc30SBarry Smith     #include <petscsys.h>
10501795a4d1SJed Brown    PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
10511795a4d1SJed Brown 
10521795a4d1SJed Brown    Not Collective
10531795a4d1SJed Brown 
10541795a4d1SJed Brown    Input Parameter:
10551795a4d1SJed Brown +  m1 - number of elements to allocate in 1st chunk  (may be zero)
10561795a4d1SJed Brown .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
10571795a4d1SJed Brown .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
10581795a4d1SJed Brown .  m4 - number of elements to allocate in 4th chunk  (may be zero)
10591795a4d1SJed Brown .  m5 - number of elements to allocate in 5th chunk  (may be zero)
10601795a4d1SJed Brown .  m6 - number of elements to allocate in 6th chunk  (may be zero)
10611795a4d1SJed Brown -  m7 - number of elements to allocate in 7th chunk  (may be zero)
10621795a4d1SJed Brown 
10631795a4d1SJed Brown    Output Parameter:
10641795a4d1SJed Brown +  r1 - memory allocated in first chunk
10651795a4d1SJed Brown .  r2 - memory allocated in second chunk
10661795a4d1SJed Brown .  r3 - memory allocated in third chunk
10671795a4d1SJed Brown .  r4 - memory allocated in fourth chunk
10681795a4d1SJed Brown .  r5 - memory allocated in fifth chunk
10691795a4d1SJed Brown .  r6 - memory allocated in sixth chunk
10701795a4d1SJed Brown -  r7 - memory allocated in seventh chunk
10711795a4d1SJed Brown 
10721795a4d1SJed Brown    Level: developer
10731795a4d1SJed Brown 
10741795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7()
10751795a4d1SJed Brown 
10761795a4d1SJed Brown   Concepts: memory allocation
10771795a4d1SJed Brown M*/
1078*ba282f50SJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(m1)*sizeof(**(r1)),(r1),(m2)*sizeof(**(r2)),(r2),(m3)*sizeof(**(r3)),(r3),(m4)*sizeof(**(r4)),(r4),(m5)*sizeof(**(r5)),(r5),(m6)*sizeof(**(r6)),(r6),(m7)*sizeof(**(r7)),(r7))
10791795a4d1SJed Brown 
10801795a4d1SJed Brown /*MC
1081503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
1082d382aafbSBarry Smith 
1083eca87e8dSBarry Smith    Synopsis:
1084aaa7dc30SBarry Smith     #include <petscsys.h>
1085b00a9115SJed Brown    PetscErrorCode PetscNew(type **result)
1086eca87e8dSBarry Smith 
1087eca87e8dSBarry Smith    Not Collective
1088eca87e8dSBarry Smith 
1089d382aafbSBarry Smith    Output Parameter:
1090b00a9115SJed Brown .  result - memory allocated, sized to match pointer type
1091d382aafbSBarry Smith 
1092d382aafbSBarry Smith    Level: beginner
1093d382aafbSBarry Smith 
1094390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1()
1095d382aafbSBarry Smith 
1096d382aafbSBarry Smith   Concepts: memory allocation
1097d382aafbSBarry Smith 
1098d382aafbSBarry Smith M*/
1099b00a9115SJed Brown #define PetscNew(b)      PetscCalloc1(1,(b))
1100ad0619ddSBarry Smith 
1101ad0619ddSBarry Smith /*MC
1102b00a9115SJed Brown    PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
1103ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
1104ad0619ddSBarry Smith 
1105ad0619ddSBarry Smith    Synopsis:
1106aaa7dc30SBarry Smith     #include <petscsys.h>
1107b00a9115SJed Brown    PetscErrorCode PetscNewLog(PetscObject obj,type **result)
1108ad0619ddSBarry Smith 
1109ad0619ddSBarry Smith    Not Collective
1110ad0619ddSBarry Smith 
1111ad0619ddSBarry Smith    Input Parameter:
1112b00a9115SJed Brown .  obj - object memory is logged to
1113ad0619ddSBarry Smith 
1114ad0619ddSBarry Smith    Output Parameter:
1115b00a9115SJed Brown .  result - memory allocated, sized to match pointer type
1116ad0619ddSBarry Smith 
1117ad0619ddSBarry Smith    Level: developer
1118ad0619ddSBarry Smith 
1119390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1()
1120ad0619ddSBarry Smith 
1121ad0619ddSBarry Smith   Concepts: memory allocation
1122ad0619ddSBarry Smith 
1123ad0619ddSBarry Smith M*/
1124d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b))))
1125d382aafbSBarry Smith 
1126d382aafbSBarry Smith /*MC
1127d382aafbSBarry Smith    PetscFree - Frees memory
1128d382aafbSBarry Smith 
1129eca87e8dSBarry Smith    Synopsis:
1130aaa7dc30SBarry Smith     #include <petscsys.h>
1131eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
1132eca87e8dSBarry Smith 
1133eca87e8dSBarry Smith    Not Collective
1134eca87e8dSBarry Smith 
1135d382aafbSBarry Smith    Input Parameter:
1136390e1bf2SBarry Smith .   memory - memory to free (the pointer is ALWAYS set to NULL upon sucess)
1137d382aafbSBarry Smith 
1138d382aafbSBarry Smith    Level: beginner
1139d382aafbSBarry Smith 
114049d7da52SJed Brown    Notes:
1141390e1bf2SBarry Smith    Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc.
1142390e1bf2SBarry Smith 
114349d7da52SJed Brown    It is safe to call PetscFree() on a NULL pointer.
1144d382aafbSBarry Smith 
1145390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1()
1146d382aafbSBarry Smith 
1147d382aafbSBarry Smith   Concepts: memory allocation
1148d382aafbSBarry Smith 
1149d382aafbSBarry Smith M*/
115049d7da52SJed Brown #define PetscFree(a)   ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0))
1151d382aafbSBarry Smith 
1152d382aafbSBarry Smith /*MC
1153d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
1154d382aafbSBarry Smith 
1155eca87e8dSBarry Smith    Synopsis:
1156aaa7dc30SBarry Smith     #include <petscsys.h>
1157eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
1158eca87e8dSBarry Smith 
1159eca87e8dSBarry Smith    Not Collective
1160eca87e8dSBarry Smith 
1161d382aafbSBarry Smith    Input Parameter:
1162d382aafbSBarry Smith +   memory1 - memory to free
1163d382aafbSBarry Smith -   memory2 - 2nd memory to free
1164d382aafbSBarry Smith 
1165d382aafbSBarry Smith    Level: developer
1166d382aafbSBarry Smith 
1167d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
1168d382aafbSBarry Smith 
1169d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
1170d382aafbSBarry Smith 
1171d382aafbSBarry Smith   Concepts: memory allocation
1172d382aafbSBarry Smith 
1173d382aafbSBarry Smith M*/
1174*ba282f50SJed Brown #define PetscFree2(m1,m2)   PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2))
1175d382aafbSBarry Smith 
1176d382aafbSBarry Smith /*MC
1177d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
1178d382aafbSBarry Smith 
1179eca87e8dSBarry Smith    Synopsis:
1180aaa7dc30SBarry Smith     #include <petscsys.h>
1181eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
1182eca87e8dSBarry Smith 
1183eca87e8dSBarry Smith    Not Collective
1184eca87e8dSBarry Smith 
1185d382aafbSBarry Smith    Input Parameter:
1186d382aafbSBarry Smith +   memory1 - memory to free
1187d382aafbSBarry Smith .   memory2 - 2nd memory to free
1188d382aafbSBarry Smith -   memory3 - 3rd memory to free
1189d382aafbSBarry Smith 
1190d382aafbSBarry Smith    Level: developer
1191d382aafbSBarry Smith 
1192d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
1193d382aafbSBarry Smith 
1194d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
1195d382aafbSBarry Smith 
1196d382aafbSBarry Smith   Concepts: memory allocation
1197d382aafbSBarry Smith 
1198d382aafbSBarry Smith M*/
1199*ba282f50SJed Brown #define PetscFree3(m1,m2,m3)   PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3))
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith /*MC
1202d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
1203d382aafbSBarry Smith 
1204eca87e8dSBarry Smith    Synopsis:
1205aaa7dc30SBarry Smith     #include <petscsys.h>
1206eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
1207eca87e8dSBarry Smith 
1208eca87e8dSBarry Smith    Not Collective
1209eca87e8dSBarry Smith 
1210d382aafbSBarry Smith    Input Parameter:
1211d382aafbSBarry Smith +   m1 - memory to free
1212d382aafbSBarry Smith .   m2 - 2nd memory to free
1213d382aafbSBarry Smith .   m3 - 3rd memory to free
1214d382aafbSBarry Smith -   m4 - 4th memory to free
1215d382aafbSBarry Smith 
1216d382aafbSBarry Smith    Level: developer
1217d382aafbSBarry Smith 
1218d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1219d382aafbSBarry Smith 
1220d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1221d382aafbSBarry Smith 
1222d382aafbSBarry Smith   Concepts: memory allocation
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith M*/
1225*ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4)   PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4))
1226d382aafbSBarry Smith 
1227d382aafbSBarry Smith /*MC
1228d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1229d382aafbSBarry Smith 
1230eca87e8dSBarry Smith    Synopsis:
1231aaa7dc30SBarry Smith     #include <petscsys.h>
1232eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1233eca87e8dSBarry Smith 
1234eca87e8dSBarry Smith    Not Collective
1235eca87e8dSBarry Smith 
1236d382aafbSBarry Smith    Input Parameter:
1237d382aafbSBarry Smith +   m1 - memory to free
1238d382aafbSBarry Smith .   m2 - 2nd memory to free
1239d382aafbSBarry Smith .   m3 - 3rd memory to free
1240d382aafbSBarry Smith .   m4 - 4th memory to free
1241d382aafbSBarry Smith -   m5 - 5th memory to free
1242d382aafbSBarry Smith 
1243d382aafbSBarry Smith    Level: developer
1244d382aafbSBarry Smith 
1245d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1246d382aafbSBarry Smith 
1247d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1248d382aafbSBarry Smith 
1249d382aafbSBarry Smith   Concepts: memory allocation
1250d382aafbSBarry Smith 
1251d382aafbSBarry Smith M*/
1252*ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5))
1253d382aafbSBarry Smith 
1254d382aafbSBarry Smith /*MC
1255d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1256d382aafbSBarry Smith 
1257eca87e8dSBarry Smith    Synopsis:
1258aaa7dc30SBarry Smith     #include <petscsys.h>
1259eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1260eca87e8dSBarry Smith 
1261eca87e8dSBarry Smith    Not Collective
1262eca87e8dSBarry Smith 
1263d382aafbSBarry Smith    Input Parameter:
1264d382aafbSBarry Smith +   m1 - memory to free
1265d382aafbSBarry Smith .   m2 - 2nd memory to free
1266d382aafbSBarry Smith .   m3 - 3rd memory to free
1267d382aafbSBarry Smith .   m4 - 4th memory to free
1268d382aafbSBarry Smith .   m5 - 5th memory to free
1269d382aafbSBarry Smith -   m6 - 6th memory to free
1270d382aafbSBarry Smith 
1271d382aafbSBarry Smith 
1272d382aafbSBarry Smith    Level: developer
1273d382aafbSBarry Smith 
1274d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1275d382aafbSBarry Smith 
1276d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1277d382aafbSBarry Smith 
1278d382aafbSBarry Smith   Concepts: memory allocation
1279d382aafbSBarry Smith 
1280d382aafbSBarry Smith M*/
1281*ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6))
1282d382aafbSBarry Smith 
1283d382aafbSBarry Smith /*MC
1284d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1285d382aafbSBarry Smith 
1286eca87e8dSBarry Smith    Synopsis:
1287aaa7dc30SBarry Smith     #include <petscsys.h>
1288eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1289eca87e8dSBarry Smith 
1290eca87e8dSBarry Smith    Not Collective
1291eca87e8dSBarry Smith 
1292d382aafbSBarry Smith    Input Parameter:
1293d382aafbSBarry Smith +   m1 - memory to free
1294d382aafbSBarry Smith .   m2 - 2nd memory to free
1295d382aafbSBarry Smith .   m3 - 3rd memory to free
1296d382aafbSBarry Smith .   m4 - 4th memory to free
1297d382aafbSBarry Smith .   m5 - 5th memory to free
1298d382aafbSBarry Smith .   m6 - 6th memory to free
1299d382aafbSBarry Smith -   m7 - 7th memory to free
1300d382aafbSBarry Smith 
1301d382aafbSBarry Smith 
1302d382aafbSBarry Smith    Level: developer
1303d382aafbSBarry Smith 
1304d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1305d382aafbSBarry Smith 
1306d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1307d382aafbSBarry Smith           PetscMalloc7()
1308d382aafbSBarry Smith 
1309d382aafbSBarry Smith   Concepts: memory allocation
1310d382aafbSBarry Smith 
1311d382aafbSBarry Smith M*/
1312*ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7))
1313d382aafbSBarry Smith 
1314*ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...);
1315*ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...);
1316efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**);
1317efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]);
13183221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**);
1319*ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool);
1320efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]));
1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1322d382aafbSBarry Smith 
1323d382aafbSBarry Smith /*
1324c1706be6SHong Zhang   Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair.
1325c1706be6SHong Zhang */
1326c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void);
1327c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void);
1328c1706be6SHong Zhang 
1329c1706be6SHong Zhang /*
1330a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1331a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1332a5057860SBarry Smith   timing etc.
1333a5057860SBarry Smith */
1334a5057860SBarry Smith typedef double PetscLogDouble;
1335a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1336a5057860SBarry Smith 
1337a5057860SBarry Smith /*
133866d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc memory allocation
1339d382aafbSBarry Smith */
1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
13450acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*);
1346efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]);
1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1348574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1350d382aafbSBarry Smith 
1351d382aafbSBarry Smith /*E
1352d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1353d382aafbSBarry Smith 
1354d382aafbSBarry Smith    Level: beginner
1355d382aafbSBarry Smith 
1356d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1357d382aafbSBarry Smith 
1358d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1359d382aafbSBarry Smith           PetscDataTypeGetSize()
1360d382aafbSBarry Smith 
1361d382aafbSBarry Smith E*/
1362d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1363570b7f6dSBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12, PETSC_STRING = 13, PETSC___FP16 = 14,PETSC_STRUCT, PETSC_DATATYPE_UNKNOWN} PetscDataType;
13646a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1365d382aafbSBarry Smith 
1366d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1367d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1368d382aafbSBarry Smith #else
1369ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1370d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
137159a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
137259a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1373570b7f6dSBarry Smith #elif defined(PETSC_USE_REAL___FP16)
1374570b7f6dSBarry Smith #define  PETSC_SCALAR  PETSC___FP16
1375d382aafbSBarry Smith #else
1376d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1377d382aafbSBarry Smith #endif
1378d382aafbSBarry Smith #endif
1379ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1380d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
138159a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
138259a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1383570b7f6dSBarry Smith #elif defined(PETSC_USE_REAL___FP16)
1384570b7f6dSBarry Smith #define  PETSC_REAL  PETSC___FP16
1385d382aafbSBarry Smith #else
1386d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1387d382aafbSBarry Smith #endif
1388d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1389d382aafbSBarry Smith 
1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
13938e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*);
1394d382aafbSBarry Smith 
1395d382aafbSBarry Smith /*
1396d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1397d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1398d382aafbSBarry Smith    functionality and/or error checking.
1399d382aafbSBarry Smith */
1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1404d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
14162f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
14212c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
142447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
14256fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
14266991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***);
14276991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***);
1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1429d382aafbSBarry Smith 
1430573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool  *);
1431573b0fb4SBarry Smith 
1432d382aafbSBarry Smith /*S
1433d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1434d382aafbSBarry Smith 
1435d382aafbSBarry Smith   Level: intermediate
1436d382aafbSBarry Smith 
1437d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1438d382aafbSBarry Smith S*/
1439d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1440d382aafbSBarry Smith 
1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1444d382aafbSBarry Smith 
1445a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*);
1446a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*);
1447a53986e1SJed Brown 
1448d382aafbSBarry Smith /*
1449d382aafbSBarry Smith    These are MPI operations for MPI_Allreduce() etc
1450d382aafbSBarry Smith */
1451367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP;
1452570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1453014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
14542414b3c7SJed Brown #else
14552414b3c7SJed Brown #define MPIU_SUM MPI_SUM
14562414b3c7SJed Brown #endif
1457570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1458014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1459014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1460d9822059SBarry Smith #else
1461d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1462d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1463d9822059SBarry Smith #endif
1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1465d382aafbSBarry Smith 
1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1468eb3f98d2SBarry Smith 
1469d382aafbSBarry Smith /*S
1470d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1471d382aafbSBarry Smith 
1472d382aafbSBarry Smith    Level: beginner
1473d382aafbSBarry Smith 
14742981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1475d382aafbSBarry Smith 
14762b26979fSBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereference()
1477d382aafbSBarry Smith S*/
1478d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1479d382aafbSBarry Smith 
1480270bf2e7SJed Brown /*MC
1481127c8a3bSJed Brown     PetscObjectId - unique integer Id for a PetscObject
1482127c8a3bSJed Brown 
1483127c8a3bSJed Brown     Level: developer
1484127c8a3bSJed Brown 
1485127c8a3bSJed Brown     Notes: Unlike pointer values, object ids are never reused.
1486127c8a3bSJed Brown 
1487127c8a3bSJed Brown .seealso: PetscObjectState, PetscObjectGetId()
1488127c8a3bSJed Brown M*/
148906e41213SSatish Balay #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */
149006e41213SSatish Balay typedef int PetscObjectId;
149106e41213SSatish Balay #else
1492bafee8b4SSatish Balay typedef PetscInt64 PetscObjectId;
149306e41213SSatish Balay #endif
1494127c8a3bSJed Brown 
1495127c8a3bSJed Brown /*MC
1496270bf2e7SJed Brown     PetscObjectState - integer state for a PetscObject
1497270bf2e7SJed Brown 
1498270bf2e7SJed Brown     Level: developer
1499270bf2e7SJed Brown 
1500270bf2e7SJed Brown     Notes:
1501270bf2e7SJed Brown     Object state is always-increasing and (for objects that track state) can be used to determine if an object has
1502270bf2e7SJed Brown     changed since the last time you interacted with it.  It is 64-bit so that it will not overflow for a very long time.
1503270bf2e7SJed Brown 
15048dcff661SJed Brown .seealso: PetscObjectId, PetscObjectStateGet(), PetscObjectStateIncrease(), PetscObjectStateSet()
1505270bf2e7SJed Brown M*/
150606e41213SSatish Balay #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */
150706e41213SSatish Balay typedef int PetscObjectState;
150806e41213SSatish Balay #else
1509bafee8b4SSatish Balay typedef PetscInt64 PetscObjectState;
151006e41213SSatish Balay #endif
1511270bf2e7SJed Brown 
1512d382aafbSBarry Smith /*S
1513140e18c1SBarry Smith      PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed
1514d382aafbSBarry Smith       by string name
1515d382aafbSBarry Smith 
1516d382aafbSBarry Smith    Level: advanced
1517d382aafbSBarry Smith 
1518140e18c1SBarry Smith .seealso:  PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist
1519d382aafbSBarry Smith S*/
1520140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList;
1521d382aafbSBarry Smith 
1522d382aafbSBarry Smith /*E
1523d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1524d382aafbSBarry Smith 
1525d382aafbSBarry Smith   Level: beginner
1526d382aafbSBarry Smith 
15271cc8b206SBarry Smith $  FILE_MODE_READ - open a file at its beginning for reading
15281cc8b206SBarry Smith $  FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
15291cc8b206SBarry Smith $  FILE_MODE_APPEND - open a file at end for writing
15301cc8b206SBarry Smith $  FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
15311cc8b206SBarry Smith $  FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1532d382aafbSBarry Smith 
1533d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1534d382aafbSBarry Smith E*/
1535d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1536d6a4318aSJed Brown extern const char *const PetscFileModes[];
1537d6a4318aSJed Brown 
1538639ff905SBarry Smith /*
1539639ff905SBarry Smith     Defines PETSc error handling.
1540639ff905SBarry Smith */
1541639ff905SBarry Smith #include <petscerror.h>
1542d382aafbSBarry Smith 
15430700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1544014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1545014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1546014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1547d382aafbSBarry Smith 
1548d382aafbSBarry Smith /*
1549d382aafbSBarry Smith    Routines that get memory usage information from the OS
1550d382aafbSBarry Smith */
1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1554b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]);
1555d382aafbSBarry Smith 
1556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1558d382aafbSBarry Smith 
1559d382aafbSBarry Smith /*
1560d382aafbSBarry Smith    Initialization of PETSc
1561d382aafbSBarry Smith */
1562014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1572d382aafbSBarry Smith 
1573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1574607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void);
1575d382aafbSBarry Smith 
1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1580d382aafbSBarry Smith 
1581d382aafbSBarry Smith /*
1582d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
15832981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1584d382aafbSBarry Smith */
1585638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1586638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1587638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1588d382aafbSBarry Smith 
1589d382aafbSBarry Smith /*
1590d382aafbSBarry Smith     Functions that can act on any PETSc object.
1591d382aafbSBarry Smith */
1592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1610bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void));
1611bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d))
1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
16140eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject);
16150eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject);
1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1617d382aafbSBarry Smith 
1618665c2dedSJed Brown #include <petscviewertypes.h>
1619639ff905SBarry Smith #include <petscoptions.h>
1620639ff905SBarry Smith 
16210633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
16220633abcbSJed Brown 
1623639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1624c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]);
1625dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer);
1626639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
16270005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr))
16280005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void));
1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1636685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]);
1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
16394099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *);
1640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1643d382aafbSBarry Smith 
1644e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS)
16457aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void);
1646e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject);
1647e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool);
1648e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject);
1649e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject);
1650e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject);
1651e04113cfSBarry Smith PETSC_EXTERN void           PetscStackSAWsGrantAccess(void);
1652e04113cfSBarry Smith PETSC_EXTERN void           PetscStackSAWsTakeAccess(void);
1653e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void);
1654e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void);
165515681b3cSBarry Smith 
1656ec7429eaSBarry Smith #else
16577aab2a10SBarry Smith #define PetscSAWsBlock()                        0
1658e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj)             0
1659e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg)        0
1660e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj)               0
1661e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj)         0
1662e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj)          0
1663e04113cfSBarry Smith #define PetscStackViewSAWs()                    0
1664e04113cfSBarry Smith #define PetscStackSAWsViewOff()                 0
1665e04113cfSBarry Smith #define PetscStackSAWsTakeAccess()
1666e04113cfSBarry Smith #define PetscStackSAWsGrantAccess()
166715681b3cSBarry Smith 
1668ec7429eaSBarry Smith #endif
1669b90c6cbeSBarry Smith 
16707d5d4d99SBarry Smith typedef void* PetscDLHandle;
1671e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
167282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
167382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *);
167482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **);
16757d5d4d99SBarry Smith 
16765fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1677a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
16785fe58b6fSBarry Smith #endif
16797eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1680a64a8e02SBarry Smith 
1681d382aafbSBarry Smith /*S
1682140e18c1SBarry Smith      PetscObjectList - Linked list of PETSc objects, each accessable by string name
1683d382aafbSBarry Smith 
16841d0fab5eSBarry Smith    Level: developer
1685d382aafbSBarry Smith 
16861d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
16871d0fab5eSBarry Smith 
1688140e18c1SBarry Smith .seealso:  PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList
1689d382aafbSBarry Smith S*/
1690140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList;
1691d382aafbSBarry Smith 
1692140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*);
1693140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*);
1694140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*);
1695140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject);
1696140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]);
1697140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *);
1698d382aafbSBarry Smith 
1699d382aafbSBarry Smith /*
1700503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1701d382aafbSBarry Smith   link libraries that will be loaded as needed.
1702d382aafbSBarry Smith */
1703a240a19fSJed Brown 
1704a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr))
1705a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void));
1706140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*);
17071c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr))
17081c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void));
1709140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]);
1710140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *);
1711140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer);
1712140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*);
1713d382aafbSBarry Smith 
1714d382aafbSBarry Smith /*S
1715d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith    Level: advanced
1718d382aafbSBarry Smith 
1719d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1720d382aafbSBarry Smith S*/
1721d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1722014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1724014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1725014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1726014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1727014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1728014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1729014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1730d382aafbSBarry Smith 
1731d382aafbSBarry Smith /*
1732d382aafbSBarry Smith      Useful utility routines
1733d382aafbSBarry Smith */
1734014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1735014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1736014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1737014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1738014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1739014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1740d382aafbSBarry Smith 
1741503cfb0cSBarry Smith /*
1742ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1743503cfb0cSBarry Smith 
1744503cfb0cSBarry Smith     Notes: This is useful in cases like
1745503cfb0cSBarry Smith $     int        *a;
1746ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
17471cc8b206SBarry Smith      where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C.
1748503cfb0cSBarry Smith */
1749d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1750503cfb0cSBarry Smith 
1751d382aafbSBarry Smith /*MC
1752d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1753d382aafbSBarry Smith 
1754d382aafbSBarry Smith    Synopsis:
1755aaa7dc30SBarry Smith     #include <petscsys.h>
1756d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1757d382aafbSBarry Smith 
1758eca87e8dSBarry Smith     Not Collective
1759eca87e8dSBarry Smith 
1760d382aafbSBarry Smith     Input Parameters:
1761d382aafbSBarry Smith .   format - the usual printf() format string
1762d382aafbSBarry Smith 
1763d382aafbSBarry Smith    Level: developer
1764d382aafbSBarry Smith 
1765d382aafbSBarry Smith     Fortran Note:
1766d382aafbSBarry Smith     This routine is not supported in Fortran.
1767d382aafbSBarry Smith 
1768d382aafbSBarry Smith     Concepts: help messages^printing
1769d382aafbSBarry Smith     Concepts: printing^help messages
1770d382aafbSBarry Smith 
1771d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1772d382aafbSBarry Smith M*/
1773014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1774d382aafbSBarry Smith 
1775fcfd50ebSBarry Smith /*
1776fcfd50ebSBarry Smith      Defines PETSc profiling.
1777fcfd50ebSBarry Smith */
17782c8e378dSBarry Smith #include <petsclog.h>
1779fcfd50ebSBarry Smith 
1780fcfd50ebSBarry Smith /*
1781fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1782fcfd50ebSBarry Smith */
1783014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1784014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1785014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1786014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1787014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1788014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1789014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1790fcfd50ebSBarry Smith 
1791014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1792014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1793014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1794d382aafbSBarry Smith 
1795d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1796014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
179796a8e8cbSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,int*);
179874ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]);
1799d382aafbSBarry Smith #endif
1800d382aafbSBarry Smith 
1801014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1802014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
18030ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*);
1804014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1805014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1806014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1807014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1808d382aafbSBarry Smith 
1809014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1810d382aafbSBarry Smith 
1811d382aafbSBarry Smith /*S
1812d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith    Level: advanced
1815d382aafbSBarry Smith 
1816d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1817d382aafbSBarry Smith S*/
1818014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1819d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1820014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1821014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1822014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1823014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1824014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1825d382aafbSBarry Smith 
1826d382aafbSBarry Smith /*
1827d382aafbSBarry Smith    For use in debuggers
1828d382aafbSBarry Smith */
1829014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1830014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1831014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1832014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1833014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1834d382aafbSBarry Smith 
1835a663daf8SBarry Smith #include <stddef.h>
1836a3aaec0aSJed Brown #include <string.h>             /* for memcpy, memset */
1837d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1838d382aafbSBarry Smith #include <stdlib.h>
1839d382aafbSBarry Smith #endif
18406c7e564aSBarry Smith 
18414a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1842d382aafbSBarry Smith #include <xmmintrin.h>
1843d382aafbSBarry Smith #endif
1844d382aafbSBarry Smith 
1845d382aafbSBarry Smith /*@C
1846d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1847d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1848d382aafbSBarry Smith    PetscMemmove() in that case.
1849d382aafbSBarry Smith 
1850d382aafbSBarry Smith    Not Collective
1851d382aafbSBarry Smith 
1852d382aafbSBarry Smith    Input Parameters:
1853d382aafbSBarry Smith +  b - pointer to initial memory space
1854d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1855d382aafbSBarry Smith 
1856d382aafbSBarry Smith    Output Parameter:
1857d382aafbSBarry Smith .  a - pointer to copy space
1858d382aafbSBarry Smith 
1859d382aafbSBarry Smith    Level: intermediate
1860d382aafbSBarry Smith 
1861d382aafbSBarry Smith    Compile Option:
1862d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1863d382aafbSBarry Smith                                   for memory copies on double precision values.
1864d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1865d382aafbSBarry Smith                                   for memory copies on double precision values.
1866d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1867d382aafbSBarry Smith                                   for memory copies on double precision values.
1868d382aafbSBarry Smith 
1869d382aafbSBarry Smith    Note:
1870d382aafbSBarry Smith    This routine is analogous to memcpy().
1871d382aafbSBarry Smith 
1872503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1873503cfb0cSBarry Smith 
1874d382aafbSBarry Smith   Concepts: memory^copying
1875d382aafbSBarry Smith   Concepts: copying^memory
1876d382aafbSBarry Smith 
1877d382aafbSBarry Smith .seealso: PetscMemmove()
1878d382aafbSBarry Smith 
1879d382aafbSBarry Smith @*/
18807087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)
1881d382aafbSBarry Smith {
1882d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1883c5e4d11fSDmitry Karpeev   size_t al = (size_t) a,bl = (size_t) b;
1884c5e4d11fSDmitry Karpeev   size_t nl = (size_t) n;
1885a7e36092SMatthew G Knepley   PetscFunctionBegin;
1886e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1887e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1888a7e36092SMatthew G Knepley #else
1889d382aafbSBarry Smith   PetscFunctionBegin;
1890a7e36092SMatthew G Knepley #endif
1891a47a537aSLisandro Dalcin   if (a != b && n > 0) {
1892d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1893e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1894d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1895d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1898c5e4d11fSDmitry Karpeev    if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1899d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1900d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1901c5df96a5SBarry Smith       PetscBLASInt   one = 1,blen;
1902c5df96a5SBarry Smith       PetscErrorCode ierr;
1903c5df96a5SBarry Smith       ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr);
19048b83055fSJed Brown       PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one));
1905d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1906d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1907d382aafbSBarry Smith #else
1908d382aafbSBarry Smith       size_t      i;
1909d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1910d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1911d382aafbSBarry Smith #endif
1912d382aafbSBarry Smith     } else {
1913d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1914d382aafbSBarry Smith     }
1915d382aafbSBarry Smith #else
1916d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith   }
1919d382aafbSBarry Smith   PetscFunctionReturn(0);
1920d382aafbSBarry Smith }
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith /*@C
1923d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1924d382aafbSBarry Smith 
1925d382aafbSBarry Smith    Not Collective
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith    Input Parameters:
1928d382aafbSBarry Smith +  a - pointer to beginning memory location
1929d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1930d382aafbSBarry Smith 
1931d382aafbSBarry Smith    Level: intermediate
1932d382aafbSBarry Smith 
1933d382aafbSBarry Smith    Compile Option:
1934d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1935d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1936d382aafbSBarry Smith 
1937503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1938503cfb0cSBarry Smith 
1939d382aafbSBarry Smith    Concepts: memory^zeroing
1940d382aafbSBarry Smith    Concepts: zeroing^memory
1941d382aafbSBarry Smith 
1942d382aafbSBarry Smith .seealso: PetscMemcpy()
1943d382aafbSBarry Smith @*/
19447087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1945d382aafbSBarry Smith {
1946d382aafbSBarry Smith   if (n > 0) {
1947d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1948e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1949d382aafbSBarry Smith #endif
1950d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1951d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1952d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1953d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1954d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1955d382aafbSBarry Smith     } else {
1956d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1957d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1958d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1959d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1960d382aafbSBarry Smith     } else {
1961d382aafbSBarry Smith #endif
1962d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1963d382aafbSBarry Smith       bzero((char *)a,n);
1964d382aafbSBarry Smith #else
1965d382aafbSBarry Smith       memset((char*)a,0,n);
1966d382aafbSBarry Smith #endif
1967d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1968d382aafbSBarry Smith     }
1969d382aafbSBarry Smith #endif
1970d382aafbSBarry Smith   }
1971d382aafbSBarry Smith   return 0;
1972d382aafbSBarry Smith }
1973d382aafbSBarry Smith 
1974d382aafbSBarry Smith /*MC
1975d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1976d382aafbSBarry Smith 
1977eca87e8dSBarry Smith    Synopsis:
1978aaa7dc30SBarry Smith     #include <petscsys.h>
1979eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1980eca87e8dSBarry Smith 
1981d382aafbSBarry Smith    Not Collective
1982d382aafbSBarry Smith 
1983d382aafbSBarry Smith    Input Parameters:
1984d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1985d382aafbSBarry Smith .  n - number of elements to fetch
1986d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
198750d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith    Level: developer
1990d382aafbSBarry Smith 
1991d382aafbSBarry Smith    Notes:
1992d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1993d382aafbSBarry Smith 
199450d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
199550d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
199650d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
199763cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
199863cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
199963cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
2000d382aafbSBarry Smith 
2001d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
2002d382aafbSBarry Smith    address).
2003d382aafbSBarry Smith 
2004d382aafbSBarry Smith    Concepts: memory
2005d382aafbSBarry Smith M*/
2006d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
2007d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
2008d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
2009d382aafbSBarry Smith   } while (0)
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /*
2012d382aafbSBarry Smith       Determine if some of the kernel computation routines use
2013d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
2014d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
2015d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
2016e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
2017d382aafbSBarry Smith */
2018d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
2021d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
2022d382aafbSBarry Smith #endif
2023d382aafbSBarry Smith 
20245a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
20255a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
2026d382aafbSBarry Smith #endif
2027d382aafbSBarry Smith 
2028d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
2029d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
2030d382aafbSBarry Smith #endif
2031d382aafbSBarry Smith 
2032d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
2033d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
2034d382aafbSBarry Smith #endif
2035d382aafbSBarry Smith 
2036d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
2037d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
2038d382aafbSBarry Smith #endif
2039d382aafbSBarry Smith 
2040d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
2041d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
2042d382aafbSBarry Smith #endif
2043d382aafbSBarry Smith 
2044d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
2045d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
2046d382aafbSBarry Smith #endif
2047d382aafbSBarry Smith 
2048d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
2049d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
2050d382aafbSBarry Smith #endif
2051d382aafbSBarry Smith 
2052d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
2053d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
2054d382aafbSBarry Smith #endif
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
2057d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
2058d382aafbSBarry Smith #endif
2059d382aafbSBarry Smith 
2060d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
2061d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
2062d382aafbSBarry Smith #endif
2063d382aafbSBarry Smith 
2064d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
2065d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
2066d382aafbSBarry Smith #endif
2067d382aafbSBarry Smith 
2068d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
2069d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
2070d382aafbSBarry Smith #endif
2071d382aafbSBarry Smith 
2072d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
2073d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
2074d382aafbSBarry Smith #endif
2075d382aafbSBarry Smith 
2076d382aafbSBarry Smith #endif
2077d382aafbSBarry Smith 
2078d382aafbSBarry Smith /*
2079d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
2080d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
2081d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
2082d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
2083d382aafbSBarry Smith    ugly extern "C" {} wrappers.
2084d382aafbSBarry Smith */
2085d382aafbSBarry Smith #if defined(__cplusplus)
2086d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
2087d382aafbSBarry Smith #define EXTERN_C_END }
2088d382aafbSBarry Smith #else
2089d382aafbSBarry Smith #define EXTERN_C_BEGIN
2090d382aafbSBarry Smith #define EXTERN_C_END
2091d382aafbSBarry Smith #endif
2092d382aafbSBarry Smith 
2093d382aafbSBarry Smith /* --------------------------------------------------------------------*/
2094d382aafbSBarry Smith 
2095d382aafbSBarry Smith /*MC
2096d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
2097d382aafbSBarry Smith         communication
2098d382aafbSBarry Smith 
2099d382aafbSBarry Smith    Level: beginner
2100d382aafbSBarry Smith 
2101d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
2102d382aafbSBarry Smith 
2103d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
2104d382aafbSBarry Smith M*/
2105d382aafbSBarry Smith 
2106d382aafbSBarry Smith /*MC
2107d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
2108390e1bf2SBarry Smith        complex number, a single precision real number, a __float128 real or complex or a __fp16 real - if the code is configured
2109390e1bf2SBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,__float128,__fp16
2110390e1bf2SBarry Smith 
2111390e1bf2SBarry Smith    Notes: For MPI calls that require datatypes, use MPIU_SCALAR as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX etc for operations.
2112390e1bf2SBarry Smith           They will automatically work correctly regardless of the size of PetscScalar
2113d382aafbSBarry Smith 
2114d382aafbSBarry Smith    Level: beginner
2115d382aafbSBarry Smith 
2116390e1bf2SBarry Smith .seealso: PetscReal, MPIU_SCALAR, PetscInt, MPIU_REAL, PetscComplex, MPIU_INT
2117d382aafbSBarry Smith M*/
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith /*MC
21208619c96cSJed Brown     PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal.
21218619c96cSJed Brown 
21228619c96cSJed Brown    Synopsis:
21238619c96cSJed Brown    #include <petscsys.h>
21248619c96cSJed Brown    PetscComplex number = 1. + 2.*PETSC_i;
21258619c96cSJed Brown 
21268619c96cSJed Brown    Level: beginner
21278619c96cSJed Brown 
2128390e1bf2SBarry Smith    Notes: For MPI calls that require datatypes, use MPIU_COMPLEX as the datatype for PetscComplex and MPIU_SUM etc for operations.
2129390e1bf2SBarry Smith           They will automatically work correctly regardless of the size of PetscComplex
2130390e1bf2SBarry Smith 
2131390e1bf2SBarry Smith           See PetscScalar for details on how to ./configure the size of PetscReal
2132390e1bf2SBarry Smith 
21338cd53115SBarry Smith           Complex numbers are automatically available if PETSc was able to find a working complex implementation
21348619c96cSJed Brown 
21358619c96cSJed Brown .seealso: PetscReal, PetscComplex, MPIU_COMPLEX, PetscInt, PETSC_i
21368619c96cSJed Brown M*/
21378619c96cSJed Brown 
21388619c96cSJed Brown /*MC
2139d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2140d382aafbSBarry Smith 
2141d382aafbSBarry Smith    Level: beginner
2142d382aafbSBarry Smith 
2143390e1bf2SBarry Smith    Notes: For MPI calls that require datatypes, use MPIU_REAL as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX etc for operations.
2144390e1bf2SBarry Smith           They will automatically work correctly regardless of the size of PetscReal
2145390e1bf2SBarry Smith 
2146390e1bf2SBarry Smith           See PetscScalar for details on how to ./configure the size of PetscReal
2147390e1bf2SBarry Smith 
2148390e1bf2SBarry Smith .seealso: PetscScalar, PetscComplex, MPIU_REAL, MPIU_SCALAR
2149d382aafbSBarry Smith M*/
2150d382aafbSBarry Smith 
2151d382aafbSBarry Smith /*MC
2152d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2153d382aafbSBarry Smith 
2154d382aafbSBarry Smith    Level: beginner
2155d382aafbSBarry Smith 
2156d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2157d382aafbSBarry Smith           pass this value
2158d382aafbSBarry Smith 
2159390e1bf2SBarry Smith .seealso: PetscReal, PetscScalar, MPIU_INT, MPIU_REAL, MPIU_COMPLEX
2160d382aafbSBarry Smith M*/
2161d382aafbSBarry Smith 
2162d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2163d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2164014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2165014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2166d382aafbSBarry Smith #else
2167d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2168d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2169d382aafbSBarry Smith #endif
2170d382aafbSBarry Smith #endif
2171d382aafbSBarry Smith 
2172d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2173d382aafbSBarry Smith 
2174d382aafbSBarry Smith /* Limit MPI to 32-bits */
2175d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2176d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2177d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2178d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2179d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2180d382aafbSBarry Smith 
218161b0d812SBarry Smith /*@C
218261b0d812SBarry Smith     PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an
218361b0d812SBarry Smith          error if the PetscBLASInt is not large enough to hold the number.
218461b0d812SBarry Smith 
218561b0d812SBarry Smith    Not Collective
218661b0d812SBarry Smith 
218761b0d812SBarry Smith    Input Parameter:
218861b0d812SBarry Smith .     a - the PetscInt value
218961b0d812SBarry Smith 
219061b0d812SBarry Smith    Output Parameter:
219161b0d812SBarry Smith .     b - the resulting PetscBLASInt value
219261b0d812SBarry Smith 
219361b0d812SBarry Smith    Level: advanced
219461b0d812SBarry Smith 
219561b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast()
219661b0d812SBarry Smith @*/
2197c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)
2198c5df96a5SBarry Smith {
2199c5df96a5SBarry Smith   PetscFunctionBegin;
2200ab7117d1SBarry Smith   *b =  (PetscBLASInt)(a);
2201c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES)
2202c5df96a5SBarry Smith   if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK");
2203c5df96a5SBarry Smith #endif
2204c5df96a5SBarry Smith   PetscFunctionReturn(0);
2205c5df96a5SBarry Smith }
2206c5df96a5SBarry Smith 
220761b0d812SBarry Smith /*@C
220861b0d812SBarry Smith     PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an
220961b0d812SBarry Smith          error if the PetscMPIInt is not large enough to hold the number.
221061b0d812SBarry Smith 
221161b0d812SBarry Smith    Not Collective
221261b0d812SBarry Smith 
221361b0d812SBarry Smith    Input Parameter:
221461b0d812SBarry Smith .     a - the PetscInt value
221561b0d812SBarry Smith 
221661b0d812SBarry Smith    Output Parameter:
221761b0d812SBarry Smith .     b - the resulting PetscMPIInt value
221861b0d812SBarry Smith 
221961b0d812SBarry Smith    Level: advanced
222061b0d812SBarry Smith 
222161b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast()
222261b0d812SBarry Smith @*/
22234dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)
22244dc2109aSBarry Smith {
22254dc2109aSBarry Smith   PetscFunctionBegin;
2226ab7117d1SBarry Smith   *b =  (PetscMPIInt)(a);
22274dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
22284dc2109aSBarry Smith   if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI");
22294dc2109aSBarry Smith #endif
22304dc2109aSBarry Smith   PetscFunctionReturn(0);
22314dc2109aSBarry Smith }
22324dc2109aSBarry Smith 
2233bafee8b4SSatish Balay #define PetscInt64Mult(a,b)   ((PetscInt64)(a))*((PetscInt64)(b))
22342f18eb33SBarry Smith 
22352f18eb33SBarry Smith /*@C
22362f18eb33SBarry Smith 
22372f18eb33SBarry Smith    PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value
22382f18eb33SBarry Smith 
22392f18eb33SBarry Smith    Not Collective
22402f18eb33SBarry Smith 
22412f18eb33SBarry Smith    Input Parameter:
22422f18eb33SBarry Smith +     a - the PetscReal value
22432f18eb33SBarry Smith -     b - the second value
22442f18eb33SBarry Smith 
2245390e1bf2SBarry Smith    Returns:
2246390e1bf2SBarry Smith       the result as a PetscInt value
22472f18eb33SBarry Smith 
2248bafee8b4SSatish Balay    Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
22492f18eb33SBarry Smith    Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt
22502f18eb33SBarry Smith    Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
22512f18eb33SBarry Smith 
22522f18eb33SBarry Smith    Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks.
22532f18eb33SBarry Smith 
22542f18eb33SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
22552f18eb33SBarry Smith 
22562f18eb33SBarry Smith    Level: advanced
22572f18eb33SBarry Smith 
2258390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
22592f18eb33SBarry Smith @*/
22602f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b)
22612f18eb33SBarry Smith {
2262bafee8b4SSatish Balay   PetscInt64 r;
22632f18eb33SBarry Smith 
2264bafee8b4SSatish Balay   r  =  (PetscInt64) (a*(PetscReal)b);
22652f18eb33SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
22662f18eb33SBarry Smith   return (PetscInt) r;
22672f18eb33SBarry Smith }
22682f18eb33SBarry Smith 
22692f18eb33SBarry Smith /*@C
22702f18eb33SBarry Smith 
22712f18eb33SBarry Smith    PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value
22722f18eb33SBarry Smith 
22732f18eb33SBarry Smith    Not Collective
22742f18eb33SBarry Smith 
22752f18eb33SBarry Smith    Input Parameter:
22762f18eb33SBarry Smith +     a - the PetscInt value
22772f18eb33SBarry Smith -     b - the second value
22782f18eb33SBarry Smith 
2279390e1bf2SBarry Smith    Returns:
2280390e1bf2SBarry Smith       the result as a PetscInt value
22812f18eb33SBarry Smith 
2282bafee8b4SSatish Balay    Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
22832f18eb33SBarry Smith    Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt
22842f18eb33SBarry Smith    Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
22852f18eb33SBarry Smith 
22862f18eb33SBarry Smith    Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks.
22872f18eb33SBarry Smith 
22882f18eb33SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
22892f18eb33SBarry Smith 
22902f18eb33SBarry Smith    Level: advanced
22912f18eb33SBarry Smith 
2292390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
22932f18eb33SBarry Smith @*/
22942f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b)
22952f18eb33SBarry Smith {
2296bafee8b4SSatish Balay   PetscInt64 r;
22972f18eb33SBarry Smith 
2298bafee8b4SSatish Balay   r  =  PetscInt64Mult(a,b);
22992f18eb33SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
23002f18eb33SBarry Smith   return (PetscInt) r;
23012f18eb33SBarry Smith }
23022f18eb33SBarry Smith 
2303f91af8c7SBarry Smith /*@C
2304f91af8c7SBarry Smith 
2305f91af8c7SBarry Smith    PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value
2306f91af8c7SBarry Smith 
2307f91af8c7SBarry Smith    Not Collective
2308f91af8c7SBarry Smith 
2309f91af8c7SBarry Smith    Input Parameter:
2310f91af8c7SBarry Smith +     a - the PetscInt value
2311f91af8c7SBarry Smith -     b - the second value
2312f91af8c7SBarry Smith 
2313390e1bf2SBarry Smith    Returns:
2314390e1bf2SBarry Smith      the result as a PetscInt value
2315f91af8c7SBarry Smith 
2316bafee8b4SSatish Balay    Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
2317f91af8c7SBarry Smith    Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt
2318f91af8c7SBarry Smith    Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
2319f91af8c7SBarry Smith 
2320f91af8c7SBarry Smith    This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
2321f91af8c7SBarry Smith 
2322f91af8c7SBarry Smith    Level: advanced
2323f91af8c7SBarry Smith 
2324390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2325f91af8c7SBarry Smith @*/
2326f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b)
2327f91af8c7SBarry Smith {
2328bafee8b4SSatish Balay   PetscInt64 r;
2329f91af8c7SBarry Smith 
2330bafee8b4SSatish Balay   r  =  ((PetscInt64)a) + ((PetscInt64)b);
2331f91af8c7SBarry Smith   if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
2332f91af8c7SBarry Smith   return (PetscInt) r;
2333f91af8c7SBarry Smith }
2334f91af8c7SBarry Smith 
23352f18eb33SBarry Smith /*@C
23362f18eb33SBarry Smith 
23372f18eb33SBarry Smith    PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow.
23382f18eb33SBarry Smith 
23392f18eb33SBarry Smith    Not Collective
23402f18eb33SBarry Smith 
23412f18eb33SBarry Smith    Input Parameter:
23422f18eb33SBarry Smith +     a - the PetscInt value
23432f18eb33SBarry Smith -     b - the second value
23442f18eb33SBarry Smith 
23452f18eb33SBarry Smith    Output Parameter:ma
2346390e1bf2SBarry Smith .     result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows
23472f18eb33SBarry Smith 
2348bafee8b4SSatish Balay    Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64
23492f18eb33SBarry Smith    Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt
23502f18eb33SBarry Smith 
2351220afb94SBarry Smith    Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks.
23522f18eb33SBarry Smith 
23532f18eb33SBarry Smith    Level: advanced
23542f18eb33SBarry Smith 
2355220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError()
23562f18eb33SBarry Smith @*/
23572f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result)
23582f18eb33SBarry Smith {
2359bafee8b4SSatish Balay   PetscInt64 r;
23602f18eb33SBarry Smith 
23612f18eb33SBarry Smith   PetscFunctionBegin;
2362bafee8b4SSatish Balay   r  =  PetscInt64Mult(a,b);
23632f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES)
23642f18eb33SBarry Smith   if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
23652f18eb33SBarry Smith #endif
2366f91af8c7SBarry Smith   if (result) *result = (PetscInt) r;
2367f91af8c7SBarry Smith   PetscFunctionReturn(0);
2368f91af8c7SBarry Smith }
2369f91af8c7SBarry Smith 
2370f91af8c7SBarry Smith /*@C
2371f91af8c7SBarry Smith 
2372fbfcfee5SBarry Smith    PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow.
2373f91af8c7SBarry Smith 
2374f91af8c7SBarry Smith    Not Collective
2375f91af8c7SBarry Smith 
2376f91af8c7SBarry Smith    Input Parameter:
2377f91af8c7SBarry Smith +     a - the PetscInt value
2378f91af8c7SBarry Smith -     b - the second value
2379f91af8c7SBarry Smith 
2380f91af8c7SBarry Smith    Output Parameter:ma
2381390e1bf2SBarry Smith .     c - the result as a PetscInt value,  or NULL if you do not want the result, you just want to check if it overflows
2382f91af8c7SBarry Smith 
2383bafee8b4SSatish Balay    Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64
2384f91af8c7SBarry Smith    Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt
2385f91af8c7SBarry Smith 
2386f91af8c7SBarry Smith    Level: advanced
2387f91af8c7SBarry Smith 
2388390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2389f91af8c7SBarry Smith @*/
2390f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result)
2391f91af8c7SBarry Smith {
2392bafee8b4SSatish Balay   PetscInt64 r;
2393f91af8c7SBarry Smith 
2394f91af8c7SBarry Smith   PetscFunctionBegin;
2395bafee8b4SSatish Balay   r  =  ((PetscInt64)a) + ((PetscInt64)b);
2396f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES)
2397f91af8c7SBarry Smith   if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
2398f91af8c7SBarry Smith #endif
2399f91af8c7SBarry Smith   if (result) *result = (PetscInt) r;
24002f18eb33SBarry Smith   PetscFunctionReturn(0);
24012f18eb33SBarry Smith }
2402c5df96a5SBarry Smith 
2403d382aafbSBarry Smith /*
24042981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2405d382aafbSBarry Smith */
2406d382aafbSBarry Smith #if defined(hz)
2407d382aafbSBarry Smith #undef hz
2408d382aafbSBarry Smith #endif
2409d382aafbSBarry Smith 
2410d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2411d382aafbSBarry Smith 
2412d382aafbSBarry Smith 
2413d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2414d382aafbSBarry Smith #include <limits.h>
2415d382aafbSBarry Smith #endif
2416d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2417d382aafbSBarry Smith #include <sys/param.h>
2418d382aafbSBarry Smith #endif
2419d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2420d382aafbSBarry Smith #include <sys/types.h>
2421d382aafbSBarry Smith #endif
2422d382aafbSBarry Smith #if defined(MAXPATHLEN)
2423d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2424d382aafbSBarry Smith #elif defined(MAX_PATH)
2425d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2426d382aafbSBarry Smith #elif defined(_MAX_PATH)
2427d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2428d382aafbSBarry Smith #else
2429d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2430d382aafbSBarry Smith #endif
2431d382aafbSBarry Smith 
2432d382aafbSBarry Smith /*MC
2433d382aafbSBarry Smith 
243466d79e26SBarry Smith     PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++
243566d79e26SBarry Smith                     and Fortran compilers when petscsys.h is included.
243666d79e26SBarry Smith 
243766d79e26SBarry Smith 
243866d79e26SBarry Smith     The current PETSc version and the API for accessing it are defined in petscversion.h
243966d79e26SBarry Smith 
244066d79e26SBarry Smith     The complete version number is given as the triple  PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z)
244166d79e26SBarry Smith 
244266d79e26SBarry Smith     A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention
244366d79e26SBarry Smith     where only a change in the major version number (x) indicates a change in the API.
244466d79e26SBarry Smith 
244566d79e26SBarry Smith     A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w
244666d79e26SBarry Smith 
244766d79e26SBarry Smith     Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z),
244866d79e26SBarry Smith     PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given
244966d79e26SBarry Smith     version number (x.y.z).
245066d79e26SBarry Smith 
245166d79e26SBarry Smith     PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases)
245266d79e26SBarry Smith 
245366d79e26SBarry Smith     PETSC_VERSION_DATE is the date the x.y.z version was released
245466d79e26SBarry Smith 
245566d79e26SBarry Smith     PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww
245666d79e26SBarry Smith 
245766d79e26SBarry Smith     PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository
245866d79e26SBarry Smith 
245966d79e26SBarry Smith     Level: intermediate
246066d79e26SBarry Smith 
246166d79e26SBarry Smith     PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0
246266d79e26SBarry Smith 
246366d79e26SBarry Smith M*/
246466d79e26SBarry Smith 
246566d79e26SBarry Smith /*MC
246666d79e26SBarry Smith 
24671b266c99SBarry Smith     UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning
24681b266c99SBarry Smith       of every function and module definition you need something like
2469d382aafbSBarry Smith 
2470d382aafbSBarry Smith $
2471af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h"
24720f665fc7SPatrick Sanan $         use petscXXX
24731b266c99SBarry Smith 
2474692afcd8SPatrick Sanan      You can declare PETSc variables using either of the following.
24751b266c99SBarry Smith 
2476d382aafbSBarry Smith $    XXX variablename
24771b266c99SBarry Smith $    type(tXXX) variablename
24781b266c99SBarry Smith 
2479692afcd8SPatrick Sanan     For example,
24801b266c99SBarry Smith 
2481bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h"
24821b266c99SBarry Smith $         use petscvec
2483d382aafbSBarry Smith $
2484692afcd8SPatrick Sanan $    Vec b
2485692afcd8SPatrick Sanan $    type(tVec) x
2486d382aafbSBarry Smith 
2487d382aafbSBarry Smith     Level: beginner
2488d382aafbSBarry Smith 
2489d382aafbSBarry Smith M*/
2490d382aafbSBarry Smith 
2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
249727710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
24985f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*);
2499d382aafbSBarry Smith 
2500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
250260e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2503d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*);
2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
25076c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]);
250817d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
250917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
251217df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*);
2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2515745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]);
2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
25196c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**);
25206c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**);
2521e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**);
2522d382aafbSBarry Smith 
2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2525d382aafbSBarry Smith 
252676bdecfbSBarry Smith /*J
2527d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2528d382aafbSBarry Smith 
2529d382aafbSBarry Smith    Level: beginner
2530d382aafbSBarry Smith 
2531e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2532d382aafbSBarry Smith    with the option --download-sprng
2533d382aafbSBarry Smith 
25348f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate()
253576bdecfbSBarry Smith J*/
253619fd82e9SBarry Smith typedef const char* PetscRandomType;
2537d382aafbSBarry Smith #define PETSCRAND       "rand"
2538d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2539d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2540c5e4d11fSDmitry Karpeev #define PETSCRANDER48   "rander48"
2541d382aafbSBarry Smith 
2542d382aafbSBarry Smith /* Logging support */
2543014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2544d382aafbSBarry Smith 
2545607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void);
2546d382aafbSBarry Smith 
2547d382aafbSBarry Smith /*S
2548d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2549d382aafbSBarry Smith 
2550d382aafbSBarry Smith    Level: intermediate
2551d382aafbSBarry Smith 
2552d382aafbSBarry Smith   Concepts: random numbers
2553d382aafbSBarry Smith 
2554d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2555d382aafbSBarry Smith S*/
2556d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2557d382aafbSBarry Smith 
2558d382aafbSBarry Smith /* Dynamic creation and loading functions */
2559140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList;
2560d382aafbSBarry Smith 
2561bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom));
256219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
256419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
2565685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);}
2566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2567d382aafbSBarry Smith 
2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2577d382aafbSBarry Smith 
2578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
258597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]);
258697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]);
2587d382aafbSBarry Smith 
2588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2593014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2599c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER)
2600e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*);
2601c891a504SStefano Zampini #endif
2602d382aafbSBarry Smith 
2603d382aafbSBarry Smith /*
2604d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2605d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2606d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2607d382aafbSBarry Smith   PetscBinarySeek().
2608d382aafbSBarry Smith */
2609d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2610d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2611d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2612d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2613d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2614d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2615d382aafbSBarry Smith 
2616d382aafbSBarry Smith /*E
2617d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2618d382aafbSBarry Smith 
2619d382aafbSBarry Smith   Level: advanced
2620d382aafbSBarry Smith 
2621d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2622d382aafbSBarry Smith E*/
2623d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2627d382aafbSBarry Smith 
2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2634d382aafbSBarry Smith 
2635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2640cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*)
2641cf4b5b4fSJed Brown   PetscAttrMPIPointerWithType(6,3);
2642d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
2643d815da10SJed Brown                                                     PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
2644d815da10SJed Brown                                                     PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
2645d815da10SJed Brown   PetscAttrMPIPointerWithType(6,3);
26466afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
26476afbe7ddSJed Brown                                                        MPI_Request**,MPI_Request**,
26486afbe7ddSJed Brown                                                        PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
26496afbe7ddSJed Brown                                                        PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
26506afbe7ddSJed Brown   PetscAttrMPIPointerWithType(6,3);
2651d382aafbSBarry Smith 
26526145cd65SJed Brown /*E
26536145cd65SJed Brown     PetscBuildTwoSidedType - algorithm for setting up two-sided communication
26546145cd65SJed Brown 
26556145cd65SJed Brown $  PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with
26566145cd65SJed Brown $      a buffer of length equal to the communicator size. Not memory-scalable due to
26576145cd65SJed Brown $      the large reduction size. Requires only MPI-1.
26586145cd65SJed Brown $  PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier.
26596145cd65SJed Brown $      Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3.
26601654bf6bSJed Brown $  PETSC_BUILDTWOSIDED_REDSCATTER - similar to above, but use more optimized function
26611654bf6bSJed Brown $      that only communicates the part of the reduction that is necessary.  Requires MPI-2.
26626145cd65SJed Brown 
26636145cd65SJed Brown    Level: developer
26646145cd65SJed Brown 
26656145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType()
26666145cd65SJed Brown E*/
26676145cd65SJed Brown typedef enum {
26686145cd65SJed Brown   PETSC_BUILDTWOSIDED_NOTSET = -1,
26696145cd65SJed Brown   PETSC_BUILDTWOSIDED_ALLREDUCE = 0,
26701654bf6bSJed Brown   PETSC_BUILDTWOSIDED_IBARRIER = 1,
267112af867fSJed Brown   PETSC_BUILDTWOSIDED_REDSCATTER = 2
26726145cd65SJed Brown   /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */
26736145cd65SJed Brown } PetscBuildTwoSidedType;
26746145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];
26756145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType);
26766145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*);
26776145cd65SJed Brown 
2678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2679d382aafbSBarry Smith 
2680d382aafbSBarry Smith /*E
2681d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2682d382aafbSBarry Smith 
2683d382aafbSBarry Smith   Level: beginner
2684d382aafbSBarry Smith 
2685d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2686d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2687d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2688d382aafbSBarry Smith E*/
26896fbadbe2SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2690d382aafbSBarry Smith 
2691d382aafbSBarry Smith /*MC
2692d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2693d382aafbSBarry Smith 
2694d382aafbSBarry Smith     Level: beginner
2695d382aafbSBarry Smith 
2696d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2697eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2698eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2699d382aafbSBarry Smith 
2700d382aafbSBarry Smith M*/
2701d382aafbSBarry Smith 
2702d382aafbSBarry Smith /*MC
2703d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2704d382aafbSBarry Smith                 value into that location
2705d382aafbSBarry Smith 
2706d382aafbSBarry Smith     Level: beginner
2707d382aafbSBarry Smith 
2708d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2709eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2710eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2711d382aafbSBarry Smith 
2712d382aafbSBarry Smith M*/
2713d382aafbSBarry Smith 
2714d382aafbSBarry Smith /*MC
2715d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2716d382aafbSBarry Smith 
2717d382aafbSBarry Smith     Level: beginner
2718d382aafbSBarry Smith 
2719d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2720d382aafbSBarry Smith 
2721d382aafbSBarry Smith M*/
2722d382aafbSBarry Smith 
2723ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject);
2724ce94432eSBarry Smith 
272545487dadSJed Brown typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
272645487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
272745487dadSJed Brown 
2728d382aafbSBarry Smith /*S
2729306c2d5bSBarry Smith    PetscSubcomm - A decomposition of an MPI communicator into subcommunicators
2730306c2d5bSBarry Smith 
2731306c2d5bSBarry Smith    Notes: After a call to PetscSubcommSetType(), PetscSubcommSetTypeGeneral(), or PetscSubcommSetFromOptions() one may call
2732306c2d5bSBarry Smith $     PetscSubcommChild() returns the associated subcommunicator on this process
27333bf92927SBarry Smith $     PetscSubcommContiguousParent() returns a parent communitor but with all child of the same subcommunicator having contiguous rank
2734306c2d5bSBarry Smith 
2735306c2d5bSBarry Smith    Sample Usage:
2736306c2d5bSBarry Smith        PetscSubcommCreate()
2737306c2d5bSBarry Smith        PetscSubcommSetNumber()
2738306c2d5bSBarry Smith        PetscSubcommSetType(PETSC_SUBCOMM_INTERLACED);
2739306c2d5bSBarry Smith        ccomm = PetscSubcommChild()
2740306c2d5bSBarry Smith        PetscSubcommDestroy()
2741d382aafbSBarry Smith 
2742d382aafbSBarry Smith    Level: advanced
2743d382aafbSBarry Smith 
2744d382aafbSBarry Smith    Concepts: communicator, create
2745306c2d5bSBarry Smith 
2746306c2d5bSBarry Smith    Notes:
2747306c2d5bSBarry Smith $   PETSC_SUBCOMM_GENERAL - similar to MPI_Comm_split() each process sets the new communicator (color) they will belong to and the order within that communicator
27483bf92927SBarry Smith $   PETSC_SUBCOMM_CONTIGUOUS - each new communicator contains a set of process with contiguous ranks in the original MPI communicator
2749306c2d5bSBarry Smith $   PETSC_SUBCOMM_INTERLACED - each new communictor contains a set of processes equally far apart in rank from the others in that new communicator
2750306c2d5bSBarry Smith 
2751306c2d5bSBarry Smith    Examaple: Consider a communicator with six processes split into 3 subcommunicators.
2752306c2d5bSBarry Smith $     PETSC_SUBCOMM_CONTIGUOUS - the first communicator contains rank 0,1  the second rank 2,3 and the third rank 4,5 in the original ordering of the original communicator
2753306c2d5bSBarry Smith $     PETSC_SUBCOMM_INTERLACED - the first communicator contains rank 0,3, the second 1,4 and the third 2,5
2754306c2d5bSBarry Smith 
2755306c2d5bSBarry Smith    Developer Notes: This is used in objects such as PCREDUNDANT() to manage the subcommunicators on which the redundant computations
2756306c2d5bSBarry Smith       are performed.
2757306c2d5bSBarry Smith 
2758306c2d5bSBarry Smith 
2759306c2d5bSBarry Smith .seealso: PetscSubcommCreate(), PetscSubcommSetNumber(), PetscSubcommSetType(), PetscSubcommView(), PetscSubcommSetFromOptions()
2760306c2d5bSBarry Smith 
2761d382aafbSBarry Smith S*/
2762d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2763d382aafbSBarry Smith 
2764d382aafbSBarry Smith struct _n_PetscSubcomm {
2765d382aafbSBarry Smith   MPI_Comm         parent;           /* parent communicator */
2766d382aafbSBarry Smith   MPI_Comm         dupparent;        /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2767306c2d5bSBarry Smith   MPI_Comm         child;            /* the sub-communicator */
276845487dadSJed Brown   PetscMPIInt      n;                /* num of subcommunicators under the parent communicator */
276945487dadSJed Brown   PetscMPIInt      color;            /* color of processors belong to this communicator */
2770708d824cSJed Brown   PetscMPIInt      *subsize;         /* size of subcommunicator[color] */
277145487dadSJed Brown   PetscSubcommType type;
2772e5acf8a4SHong Zhang   char             *subcommprefix;
2773d382aafbSBarry Smith };
2774d382aafbSBarry Smith 
2775c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;}
2776306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;}
277736be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;}
2778014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2779014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2780014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2781014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
278265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt);
2783053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer);
2784f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm);
2785e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]);
2786d382aafbSBarry Smith 
27870f453b92SJed Brown /*S
27889962606eSBarry Smith      PetscHeap - A simple class for managing heaps
27899962606eSBarry Smith 
27909962606eSBarry Smith    Level: intermediate
27919962606eSBarry Smith 
27929962606eSBarry Smith   Concepts: random numbers
27939962606eSBarry Smith 
27949962606eSBarry Smith .seealso:  PetscHeapCreate(), PetscHeapAdd(), PetscHeapPop(), PetscHeapPeek(), PetscHeapStash(), PetscHeapUnstash(), PetscHeapView(), PetscHeapDestroy()
27959962606eSBarry Smith S*/
27969962606eSBarry Smith typedef struct _PetscHeap *PetscHeap;
27979962606eSBarry Smith 
27989962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*);
27999962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt);
28009962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*);
28019962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*);
28029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt);
28039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap);
28049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*);
28059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer);
28069962606eSBarry Smith 
28079962606eSBarry Smith /*S
28080f453b92SJed Brown    PetscSegBuffer - a segmented extendable buffer
28090f453b92SJed Brown 
28100f453b92SJed Brown    Level: developer
28110f453b92SJed Brown 
28120f453b92SJed Brown .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy()
28130f453b92SJed Brown S*/
28140f453b92SJed Brown typedef struct _n_PetscSegBuffer *PetscSegBuffer;
281513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*);
28160f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*);
281713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*);
2818137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*);
2819137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*);
2820137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*);
282113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*);
282213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t);
28230f453b92SJed Brown 
2824471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling
2825471ecdacSJed Brown  * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as
2826471ecdacSJed Brown  * possible. */
282735005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);}
2828d382aafbSBarry Smith 
28299de0f6ecSBarry Smith typedef struct _n_PetscOptionsHelpPrinted *PetscOptionsHelpPrinted;
28309de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton;
28319de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*);
28329de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*);
28339de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*);
28349de0f6ecSBarry Smith 
2835268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList;
2836fbfcfee5SBarry Smith 
28371f817a21SBarry Smith /*@C
28381f817a21SBarry Smith       PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code.
28391f817a21SBarry Smith 
28401f817a21SBarry Smith      Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed
28411f817a21SBarry Smith 
28421f817a21SBarry Smith      Input Parameters:
28431f817a21SBarry Smith +      cite - the bibtex item, formated to displayed on multiple lines nicely
28441f817a21SBarry Smith -      set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation
28451f817a21SBarry Smith 
2846850545d0SSatish Balay    Level: intermediate
2847850545d0SSatish Balay 
28481f817a21SBarry Smith      Options Database:
2849063414e0SPatrick Sanan .     -citations [filename]   - print out the bibtex entries for the given computation
28501f817a21SBarry Smith @*/
2851dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set)
2852dff31646SBarry Smith {
2853dff31646SBarry Smith   size_t         len;
2854dff31646SBarry Smith   char           *vstring;
2855dff31646SBarry Smith   PetscErrorCode ierr;
2856dff31646SBarry Smith 
28571f817a21SBarry Smith   PetscFunctionBegin;
28588d3683fcSBarry Smith   if (set && *set) PetscFunctionReturn(0);
2859dff31646SBarry Smith   ierr = PetscStrlen(cit,&len);CHKERRQ(ierr);
286035005c2bSLisandro Dalcin   ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr);
2861dff31646SBarry Smith   ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr);
2862dff31646SBarry Smith   if (set) *set = PETSC_TRUE;
28631f817a21SBarry Smith   PetscFunctionReturn(0);
2864dff31646SBarry Smith }
2865dff31646SBarry Smith 
2866b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t);
2867fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t);
2868fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t);
2869f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []);
2870fe278a28SBarry Smith 
2871f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t);
2872f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t);
2873b967cddfSBarry Smith 
287404102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*);
2875763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*);
2876dff31646SBarry Smith 
287768e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*);
28785dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t);
2879d382aafbSBarry Smith 
2880b2566f29SBarry Smith 
2881b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG)
2882b2566f29SBarry Smith /*
2883b2566f29SBarry Smith    Verify that all processes in the communicator have called this from the same line of code
2884b2566f29SBarry Smith  */
28858f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *);
288677a5e07dSBarry Smith 
288777a5e07dSBarry Smith /*MC
288877a5e07dSBarry Smith    MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the
288977a5e07dSBarry Smith                     same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths
289077a5e07dSBarry Smith                     resulting in inconsistent and incorrect calls to MPI_Allreduce().
289177a5e07dSBarry Smith 
289277a5e07dSBarry Smith    Collective on MPI_Comm
289377a5e07dSBarry Smith 
289477a5e07dSBarry Smith    Synopsis:
289577a5e07dSBarry Smith      #include <petscsys.h>
289677a5e07dSBarry Smith      PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm);
289777a5e07dSBarry Smith 
289877a5e07dSBarry Smith    Input Parameters:
289977a5e07dSBarry Smith +  indata - pointer to the input data to be reduced
290077a5e07dSBarry Smith .  count - the number of MPI data items in indata and outdata
290177a5e07dSBarry Smith .  datatype - the MPI datatype, for example MPI_INT
290277a5e07dSBarry Smith .  op - the MPI operation, for example MPI_SUM
290377a5e07dSBarry Smith -  comm - the MPI communicator on which the operation occurs
290477a5e07dSBarry Smith 
290577a5e07dSBarry Smith    Output Parameter:
290677a5e07dSBarry Smith .  outdata - the reduced values
290777a5e07dSBarry Smith 
290877a5e07dSBarry Smith    Notes: In optimized mode this directly calls MPI_Allreduce()
290977a5e07dSBarry Smith 
291077a5e07dSBarry Smith    Level: developer
291177a5e07dSBarry Smith 
291277a5e07dSBarry Smith .seealso: MPI_Allreduce()
291377a5e07dSBarry Smith M*/
2914fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm))
2915b2566f29SBarry Smith #else
2916b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm)
2917b2566f29SBarry Smith #endif
2918b2566f29SBarry Smith 
2919d382aafbSBarry Smith #endif
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