xref: /petsc/include/petscsys.h (revision c3aae35656f8f9d44240d8e8e3cc2c090df1afbc)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
142c8e378dSBarry Smith #include <petscconf.h>
152c8e378dSBarry Smith #include <petscfix.h>
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
36e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
37d382aafbSBarry Smith */
38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
40d382aafbSBarry Smith #endif
411ec50b02SJed Brown 
421ec50b02SJed Brown #if defined(__cplusplus)
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
441ec50b02SJed Brown #else
451ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
461ec50b02SJed Brown #endif
47d382aafbSBarry Smith 
48ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
49014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
50014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
51014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
52014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
53014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
54d382aafbSBarry Smith #else
55014dd563SJed Brown #  define PETSC_DLLEXPORT
56014dd563SJed Brown #  define PETSC_DLLIMPORT
57014dd563SJed Brown #endif
58014dd563SJed Brown 
59014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
60014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
61014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
62014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
63014dd563SJed Brown #endif
64014dd563SJed Brown 
65014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
66014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
67638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
68014dd563SJed Brown #else
69014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
70638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
71d382aafbSBarry Smith #endif
7227710113SBarry Smith 
732c8e378dSBarry Smith #include <petscversion.h>
74301d30feSBarry Smith #define PETSC_AUTHOR_INFO  "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
75d382aafbSBarry Smith 
76d382aafbSBarry Smith /* ========================================================================== */
77d382aafbSBarry Smith 
78d382aafbSBarry Smith /*
79d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
82d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
83d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
84d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
85d382aafbSBarry Smith     mpicxx.h directly in their code
86d382aafbSBarry Smith */
87d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
88d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
892c8e378dSBarry Smith #include <mpi.h>
9065013866SBarry Smith 
91d382aafbSBarry Smith /*
922981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
93d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
94d382aafbSBarry Smith */
95d382aafbSBarry Smith #include <stdio.h>
96d382aafbSBarry Smith 
97d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
98d382aafbSBarry Smith #if !defined(MPIAPI)
99d382aafbSBarry Smith #define MPIAPI
100d382aafbSBarry Smith #endif
101d382aafbSBarry Smith 
102b3506946SBarry Smith 
103d382aafbSBarry Smith /*MC
104d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
105d382aafbSBarry Smith 
106d382aafbSBarry Smith     Level: beginner
107d382aafbSBarry Smith 
108d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
109d382aafbSBarry Smith M*/
110d382aafbSBarry Smith typedef int PetscErrorCode;
111d382aafbSBarry Smith 
112d382aafbSBarry Smith /*MC
113d382aafbSBarry Smith 
114503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
115d382aafbSBarry Smith          (internal integer in the data structure used for error
1162981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1170700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
118d382aafbSBarry Smith 
119d382aafbSBarry Smith     Level: advanced
120d382aafbSBarry Smith 
1210700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
122d382aafbSBarry Smith M*/
1230700a824SBarry Smith typedef int PetscClassId;
124d382aafbSBarry Smith 
125d382aafbSBarry Smith 
126d382aafbSBarry Smith /*MC
127d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
128d382aafbSBarry Smith 
129d382aafbSBarry Smith     Level: intermediate
130d382aafbSBarry Smith 
131d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1323b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
133d382aafbSBarry Smith 
1343b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
1352981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
136d382aafbSBarry Smith 
1373b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1382981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
139d382aafbSBarry Smith 
140d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
141d382aafbSBarry Smith 
142d382aafbSBarry Smith M*/
143d382aafbSBarry Smith typedef int PetscMPIInt;
144d382aafbSBarry Smith 
145d382aafbSBarry Smith /*MC
146d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
147d382aafbSBarry Smith 
148d382aafbSBarry Smith     Level: intermediate
149d382aafbSBarry Smith 
150d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
151d382aafbSBarry Smith M*/
152d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
153*c3aae356SJed Brown extern MPI_Datatype MPIU_ENUM;
154d382aafbSBarry Smith 
155d382aafbSBarry Smith /*MC
156d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1573b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
158d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
159d382aafbSBarry Smith 
160d382aafbSBarry Smith    Level: intermediate
161d382aafbSBarry Smith 
162d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
163d382aafbSBarry Smith M*/
164f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
165f505b413SSatish Balay typedef long long Petsc64bitInt;
166f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
167236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
168236ed0a3SSatish Balay #else
169f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
170236ed0a3SSatish Balay #endif
171d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
172236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
173d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
174d382aafbSBarry Smith #else
175d382aafbSBarry Smith typedef int PetscInt;
176d382aafbSBarry Smith #define MPIU_INT MPI_INT
177d382aafbSBarry Smith #endif
178236ed0a3SSatish Balay 
179d382aafbSBarry Smith 
180702bc34aSSatish Balay /*MC
181702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
182702bc34aSSatish Balay 
183702bc34aSSatish Balay     Level: intermediate
184702bc34aSSatish Balay 
185702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
186702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
187702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
188702bc34aSSatish Balay 
189702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1902981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
191702bc34aSSatish Balay 
192702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1932981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
194702bc34aSSatish Balay 
1952981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
196702bc34aSSatish Balay      if you run ./configure with the option
197702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
1982981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
1992981ebdbSBarry Smith 
2002981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2012981ebdbSBarry Smith 
2022981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
203702bc34aSSatish Balay 
204702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
205702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
206702bc34aSSatish Balay 
207702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
208702bc34aSSatish Balay 
209702bc34aSSatish Balay M*/
210702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
211702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
212702bc34aSSatish Balay #else
213702bc34aSSatish Balay typedef int PetscBLASInt;
214702bc34aSSatish Balay #endif
215702bc34aSSatish Balay 
21658b60935SBarry Smith /*EC
21758b60935SBarry Smith 
2182981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
21958b60935SBarry Smith 
22058b60935SBarry Smith     Level: advanced
22158b60935SBarry Smith 
22258b60935SBarry Smith .seealso: PetscObjectSetPrecision()
22358b60935SBarry Smith E*/
22458b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
225014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
22658b60935SBarry Smith 
227503cfb0cSBarry Smith /*
228503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
229503cfb0cSBarry Smith */
230d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
231adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED
232d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
233adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG
234d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
235adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG
236d382aafbSBarry Smith #else
237d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
238d382aafbSBarry Smith #endif
239d382aafbSBarry Smith 
240d382aafbSBarry Smith 
241d382aafbSBarry Smith /*
242d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
243d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
244d382aafbSBarry Smith */
245014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
246d382aafbSBarry Smith 
247d382aafbSBarry Smith /*
248d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
249d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
250d382aafbSBarry Smith */
251014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
252d382aafbSBarry Smith 
253d382aafbSBarry Smith /*MC
254d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
255d382aafbSBarry Smith 
256d382aafbSBarry Smith     Synopsis:
257ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
258d382aafbSBarry Smith 
259eca87e8dSBarry Smith     Not Collective
260eca87e8dSBarry Smith 
261d382aafbSBarry Smith     Input Parameters:
262d382aafbSBarry Smith .   cond - condition or expression
263d382aafbSBarry Smith 
264d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
265d382aafbSBarry Smith     branch is unlikely.
266d382aafbSBarry Smith 
267d382aafbSBarry Smith     Level: advanced
268d382aafbSBarry Smith 
269d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
270d382aafbSBarry Smith M*/
271d382aafbSBarry Smith 
272d382aafbSBarry Smith /*MC
273d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
274d382aafbSBarry Smith 
275d382aafbSBarry Smith     Synopsis:
276ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
277d382aafbSBarry Smith 
278eca87e8dSBarry Smith     Not Collective
279eca87e8dSBarry Smith 
280d382aafbSBarry Smith     Input Parameters:
281d382aafbSBarry Smith .   cond - condition or expression
282d382aafbSBarry Smith 
283d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
284d382aafbSBarry Smith     branch is likely.
285d382aafbSBarry Smith 
286d382aafbSBarry Smith     Level: advanced
287d382aafbSBarry Smith 
288d382aafbSBarry Smith .seealso: PetscUnlikely()
289d382aafbSBarry Smith M*/
290d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
291d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
292d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
293d382aafbSBarry Smith #else
294cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
295cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
296d382aafbSBarry Smith #endif
297d382aafbSBarry Smith 
298d382aafbSBarry Smith /*
299d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
300d382aafbSBarry Smith */
3012c8e378dSBarry Smith #include <petscmath.h>
302d382aafbSBarry Smith 
303d382aafbSBarry Smith /*
304d382aafbSBarry Smith     Declare extern C stuff after including external header files
305d382aafbSBarry Smith */
306d382aafbSBarry Smith 
307d382aafbSBarry Smith 
308d382aafbSBarry Smith /*
309d382aafbSBarry Smith        Basic PETSc constants
310d382aafbSBarry Smith */
311d382aafbSBarry Smith 
312d382aafbSBarry Smith /*E
313ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
314d382aafbSBarry Smith 
315d382aafbSBarry Smith    Level: beginner
316d382aafbSBarry Smith 
317ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
31834e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
31934e82e7dSBarry Smith 
320d382aafbSBarry Smith E*/
321ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
3226a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
323*c3aae356SJed Brown extern MPI_Datatype MPIU_BOOL;
32470b3c8c7SBarry Smith 
32570b3c8c7SBarry Smith /*E
32670b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
32770b3c8c7SBarry Smith 
32870b3c8c7SBarry Smith    Level: beginner
32970b3c8c7SBarry Smith 
33070b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
33170b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
33270b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
33370b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
33470b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
33570b3c8c7SBarry Smith 
33670b3c8c7SBarry Smith E*/
33770b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
3386a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
339d382aafbSBarry Smith 
340d382aafbSBarry Smith /*MC
341ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
342d382aafbSBarry Smith 
343d382aafbSBarry Smith     Level: beginner
344d382aafbSBarry Smith 
345d382aafbSBarry Smith     Note: Zero integer
346d382aafbSBarry Smith 
347ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
348d382aafbSBarry Smith M*/
349d382aafbSBarry Smith 
350d382aafbSBarry Smith /*MC
351ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
352d382aafbSBarry Smith 
353d382aafbSBarry Smith     Level: beginner
354d382aafbSBarry Smith 
355d382aafbSBarry Smith     Note: Nonzero integer
356d382aafbSBarry Smith 
357ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
358d382aafbSBarry Smith M*/
359d382aafbSBarry Smith 
360d382aafbSBarry Smith /*MC
361d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
362d382aafbSBarry Smith 
363d382aafbSBarry Smith    Level: beginner
364d382aafbSBarry Smith 
365d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
366d382aafbSBarry Smith           some default
367d382aafbSBarry Smith 
368d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
369503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
370d382aafbSBarry Smith 
37134e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
37234e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
37334e82e7dSBarry Smith 
374d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
375d382aafbSBarry Smith 
376d382aafbSBarry Smith M*/
377d382aafbSBarry Smith #define PETSC_NULL           0
378d382aafbSBarry Smith 
379d382aafbSBarry Smith /*MC
380d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
381d382aafbSBarry Smith 
382d382aafbSBarry Smith    Level: beginner
383d382aafbSBarry Smith 
384d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
385d382aafbSBarry Smith           some default
386d382aafbSBarry Smith 
387d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
388d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
389d382aafbSBarry Smith 
390d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
391d382aafbSBarry Smith 
392d382aafbSBarry Smith M*/
393d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
394d382aafbSBarry Smith 
395d382aafbSBarry Smith /*MC
396557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
397557d4da8SBarry Smith        where you wish PETSc to use the default.
398557d4da8SBarry Smith 
399557d4da8SBarry Smith    Level: beginner
400557d4da8SBarry Smith 
401557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
402557d4da8SBarry Smith 
403557d4da8SBarry Smith M*/
404557d4da8SBarry Smith #define PETSC_DECIDE  -1
405557d4da8SBarry Smith 
406557d4da8SBarry Smith /*MC
407d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
408d382aafbSBarry Smith        where you wish PETSc to compute the required value.
409d382aafbSBarry Smith 
410d382aafbSBarry Smith    Level: beginner
411d382aafbSBarry Smith 
412557d4da8SBarry Smith 
413557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
414557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
415557d4da8SBarry Smith 
416d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
417d382aafbSBarry Smith 
418d382aafbSBarry Smith M*/
419d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
420d382aafbSBarry Smith 
421d382aafbSBarry Smith /*MC
422557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
423557d4da8SBarry Smith        where you wish PETSc to use the default.
424557d4da8SBarry Smith 
425557d4da8SBarry Smith    Level: beginner
426557d4da8SBarry Smith 
427557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
428557d4da8SBarry Smith 
429557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
430557d4da8SBarry Smith 
431557d4da8SBarry Smith M*/
432557d4da8SBarry Smith #define PETSC_DEFAULT  -2
433557d4da8SBarry Smith 
434557d4da8SBarry Smith /*MC
435d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
436d382aafbSBarry Smith            all the processs that PETSc knows about.
437d382aafbSBarry Smith 
438d382aafbSBarry Smith    Level: beginner
439d382aafbSBarry Smith 
440d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
441d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
442d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
443d382aafbSBarry Smith           PetscInitialize()
444d382aafbSBarry Smith 
445d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
446d382aafbSBarry Smith 
447d382aafbSBarry Smith M*/
448014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
449d382aafbSBarry Smith 
450d382aafbSBarry Smith /*MC
451503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
452d382aafbSBarry Smith 
453d382aafbSBarry Smith    Level: beginner
454d382aafbSBarry Smith 
455d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
456d382aafbSBarry Smith 
457d382aafbSBarry Smith M*/
458d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
459d382aafbSBarry Smith 
460014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
461014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
462014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
463d382aafbSBarry Smith 
464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
467d382aafbSBarry Smith 
468d382aafbSBarry Smith /*MC
469d382aafbSBarry Smith    PetscMalloc - Allocates memory
470d382aafbSBarry Smith 
471eca87e8dSBarry Smith    Synopsis:
472eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
473eca87e8dSBarry Smith 
474eca87e8dSBarry Smith    Not Collective
475eca87e8dSBarry Smith 
476d382aafbSBarry Smith    Input Parameter:
477d382aafbSBarry Smith .  m - number of bytes to allocate
478d382aafbSBarry Smith 
479d382aafbSBarry Smith    Output Parameter:
480d382aafbSBarry Smith .  result - memory allocated
481d382aafbSBarry Smith 
482d382aafbSBarry Smith    Level: beginner
483d382aafbSBarry Smith 
484d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
485d382aafbSBarry Smith 
486d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
487d382aafbSBarry Smith           properly handle not freeing the null pointer.
488d382aafbSBarry Smith 
489d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
490d382aafbSBarry Smith 
491d382aafbSBarry Smith   Concepts: memory allocation
492d382aafbSBarry Smith 
493d382aafbSBarry Smith M*/
4942714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
495d382aafbSBarry Smith 
496d382aafbSBarry Smith /*MC
497503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
498d382aafbSBarry Smith 
499d382aafbSBarry Smith    Synopsis:
500d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
501d382aafbSBarry Smith 
502eca87e8dSBarry Smith    Not Collective
503eca87e8dSBarry Smith 
504eca87e8dSBarry Smith    Input Parameters:
505eca87e8dSBarry Smith .  addr - address to align (any pointer type)
506eca87e8dSBarry Smith 
507d382aafbSBarry Smith    Level: developer
508d382aafbSBarry Smith 
509d382aafbSBarry Smith .seealso: PetscMallocAlign()
510d382aafbSBarry Smith 
511d382aafbSBarry Smith   Concepts: memory allocation
512d382aafbSBarry Smith M*/
513d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
514d382aafbSBarry Smith 
515d382aafbSBarry Smith /*MC
516503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
517d382aafbSBarry Smith 
518eca87e8dSBarry Smith    Synopsis:
519eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
520eca87e8dSBarry Smith 
521eca87e8dSBarry Smith    Not Collective
522eca87e8dSBarry Smith 
523d382aafbSBarry Smith    Input Parameter:
524d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
525d382aafbSBarry Smith .  t1 - type of first memory elements
526d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
527d382aafbSBarry Smith -  t2 - type of second memory elements
528d382aafbSBarry Smith 
529d382aafbSBarry Smith    Output Parameter:
530d382aafbSBarry Smith +  r1 - memory allocated in first chunk
531d382aafbSBarry Smith -  r2 - memory allocated in second chunk
532d382aafbSBarry Smith 
533d382aafbSBarry Smith    Level: developer
534d382aafbSBarry Smith 
535d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
536d382aafbSBarry Smith 
537d382aafbSBarry Smith   Concepts: memory allocation
538d382aafbSBarry Smith 
539d382aafbSBarry Smith M*/
540d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
541d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
542d382aafbSBarry Smith #else
5432981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
544d382aafbSBarry Smith #endif
545d382aafbSBarry Smith 
546d382aafbSBarry Smith /*MC
547503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
548d382aafbSBarry Smith 
549eca87e8dSBarry Smith    Synopsis:
550eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
551eca87e8dSBarry Smith 
552eca87e8dSBarry Smith    Not Collective
553eca87e8dSBarry Smith 
554d382aafbSBarry Smith    Input Parameter:
555d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
556d382aafbSBarry Smith .  t1 - type of first memory elements
557d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
558d382aafbSBarry Smith .  t2 - type of second memory elements
559d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
560d382aafbSBarry Smith -  t3 - type of third memory elements
561d382aafbSBarry Smith 
562d382aafbSBarry Smith    Output Parameter:
563d382aafbSBarry Smith +  r1 - memory allocated in first chunk
564d382aafbSBarry Smith .  r2 - memory allocated in second chunk
565d382aafbSBarry Smith -  r3 - memory allocated in third chunk
566d382aafbSBarry Smith 
567d382aafbSBarry Smith    Level: developer
568d382aafbSBarry Smith 
569d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
570d382aafbSBarry Smith 
571d382aafbSBarry Smith   Concepts: memory allocation
572d382aafbSBarry Smith 
573d382aafbSBarry Smith M*/
574d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
575d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
576d382aafbSBarry Smith #else
5773b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
578d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
579d382aafbSBarry Smith #endif
580d382aafbSBarry Smith 
581d382aafbSBarry Smith /*MC
582503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
583d382aafbSBarry Smith 
584eca87e8dSBarry Smith    Synopsis:
585eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
586eca87e8dSBarry Smith 
587eca87e8dSBarry Smith    Not Collective
588eca87e8dSBarry Smith 
589d382aafbSBarry Smith    Input Parameter:
590d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
591d382aafbSBarry Smith .  t1 - type of first memory elements
592d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
593d382aafbSBarry Smith .  t2 - type of second memory elements
594d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
595d382aafbSBarry Smith .  t3 - type of third memory elements
596d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
597d382aafbSBarry Smith -  t4 - type of fourth memory elements
598d382aafbSBarry Smith 
599d382aafbSBarry Smith    Output Parameter:
600d382aafbSBarry Smith +  r1 - memory allocated in first chunk
601d382aafbSBarry Smith .  r2 - memory allocated in second chunk
602d382aafbSBarry Smith .  r3 - memory allocated in third chunk
603d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
604d382aafbSBarry Smith 
605d382aafbSBarry Smith    Level: developer
606d382aafbSBarry Smith 
607d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
608d382aafbSBarry Smith 
609d382aafbSBarry Smith   Concepts: memory allocation
610d382aafbSBarry Smith 
611d382aafbSBarry Smith M*/
612d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
613d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
614d382aafbSBarry Smith #else
615d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6163b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
617d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
618d382aafbSBarry Smith #endif
619d382aafbSBarry Smith 
620d382aafbSBarry Smith /*MC
621503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
622d382aafbSBarry Smith 
623eca87e8dSBarry Smith    Synopsis:
624eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
625eca87e8dSBarry Smith 
626eca87e8dSBarry Smith    Not Collective
627eca87e8dSBarry Smith 
628d382aafbSBarry Smith    Input Parameter:
629d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
630d382aafbSBarry Smith .  t1 - type of first memory elements
631d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
632d382aafbSBarry Smith .  t2 - type of second memory elements
633d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
634d382aafbSBarry Smith .  t3 - type of third memory elements
635d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
636d382aafbSBarry Smith .  t4 - type of fourth memory elements
637d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
638d382aafbSBarry Smith -  t5 - type of fifth memory elements
639d382aafbSBarry Smith 
640d382aafbSBarry Smith    Output Parameter:
641d382aafbSBarry Smith +  r1 - memory allocated in first chunk
642d382aafbSBarry Smith .  r2 - memory allocated in second chunk
643d382aafbSBarry Smith .  r3 - memory allocated in third chunk
644d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
645d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
646d382aafbSBarry Smith 
647d382aafbSBarry Smith    Level: developer
648d382aafbSBarry Smith 
649d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
650d382aafbSBarry Smith 
651d382aafbSBarry Smith   Concepts: memory allocation
652d382aafbSBarry Smith 
653d382aafbSBarry Smith M*/
654d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
655d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
656d382aafbSBarry Smith #else
657d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6583b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
659d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
660d382aafbSBarry Smith #endif
661d382aafbSBarry Smith 
662d382aafbSBarry Smith 
663d382aafbSBarry Smith /*MC
664503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
665d382aafbSBarry Smith 
666eca87e8dSBarry Smith    Synopsis:
667eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
668eca87e8dSBarry Smith 
669eca87e8dSBarry Smith    Not Collective
670eca87e8dSBarry Smith 
671d382aafbSBarry Smith    Input Parameter:
672d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
673d382aafbSBarry Smith .  t1 - type of first memory elements
674d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
675d382aafbSBarry Smith .  t2 - type of second memory elements
676d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
677d382aafbSBarry Smith .  t3 - type of third memory elements
678d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
679d382aafbSBarry Smith .  t4 - type of fourth memory elements
680d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
681d382aafbSBarry Smith .  t5 - type of fifth memory elements
682d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
683d382aafbSBarry Smith -  t6 - type of sixth memory elements
684d382aafbSBarry Smith 
685d382aafbSBarry Smith    Output Parameter:
686d382aafbSBarry Smith +  r1 - memory allocated in first chunk
687d382aafbSBarry Smith .  r2 - memory allocated in second chunk
688d382aafbSBarry Smith .  r3 - memory allocated in third chunk
689d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
690d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
691d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
692d382aafbSBarry Smith 
693d382aafbSBarry Smith    Level: developer
694d382aafbSBarry Smith 
695d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
696d382aafbSBarry Smith 
697d382aafbSBarry Smith   Concepts: memory allocation
698d382aafbSBarry Smith 
699d382aafbSBarry Smith M*/
700d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
701d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
702d382aafbSBarry Smith #else
703d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7043b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
705d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
706d382aafbSBarry Smith #endif
707d382aafbSBarry Smith 
708d382aafbSBarry Smith /*MC
709503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
710d382aafbSBarry Smith 
711eca87e8dSBarry Smith    Synopsis:
712eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
713eca87e8dSBarry Smith 
714eca87e8dSBarry Smith    Not Collective
715eca87e8dSBarry Smith 
716d382aafbSBarry Smith    Input Parameter:
717d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
718d382aafbSBarry Smith .  t1 - type of first memory elements
719d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
720d382aafbSBarry Smith .  t2 - type of second memory elements
721d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
722d382aafbSBarry Smith .  t3 - type of third memory elements
723d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
724d382aafbSBarry Smith .  t4 - type of fourth memory elements
725d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
726d382aafbSBarry Smith .  t5 - type of fifth memory elements
727d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
728d382aafbSBarry Smith .  t6 - type of sixth memory elements
729d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
730d382aafbSBarry Smith -  t7 - type of sixth memory elements
731d382aafbSBarry Smith 
732d382aafbSBarry Smith    Output Parameter:
733d382aafbSBarry Smith +  r1 - memory allocated in first chunk
734d382aafbSBarry Smith .  r2 - memory allocated in second chunk
735d382aafbSBarry Smith .  r3 - memory allocated in third chunk
736d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
737d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
738d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
739eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
740d382aafbSBarry Smith 
741d382aafbSBarry Smith    Level: developer
742d382aafbSBarry Smith 
743d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
744d382aafbSBarry Smith 
745d382aafbSBarry Smith   Concepts: memory allocation
746d382aafbSBarry Smith 
747d382aafbSBarry Smith M*/
748d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
749d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
750d382aafbSBarry Smith #else
751d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7523b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
753d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
754d382aafbSBarry Smith #endif
755d382aafbSBarry Smith 
756d382aafbSBarry Smith /*MC
757503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
758d382aafbSBarry Smith 
759eca87e8dSBarry Smith    Synopsis:
760eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
761eca87e8dSBarry Smith 
762eca87e8dSBarry Smith    Not Collective
763eca87e8dSBarry Smith 
764d382aafbSBarry Smith    Input Parameter:
765d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
766d382aafbSBarry Smith 
767d382aafbSBarry Smith    Output Parameter:
768d382aafbSBarry Smith .  result - memory allocated
769d382aafbSBarry Smith 
770d382aafbSBarry Smith    Level: beginner
771d382aafbSBarry Smith 
772ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
773d382aafbSBarry Smith 
774d382aafbSBarry Smith   Concepts: memory allocation
775d382aafbSBarry Smith 
776d382aafbSBarry Smith M*/
777d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
778ad0619ddSBarry Smith 
779ad0619ddSBarry Smith /*MC
780ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
781ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
782ad0619ddSBarry Smith 
783ad0619ddSBarry Smith    Synopsis:
784ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
785ad0619ddSBarry Smith 
786ad0619ddSBarry Smith    Not Collective
787ad0619ddSBarry Smith 
788ad0619ddSBarry Smith    Input Parameter:
789ad0619ddSBarry Smith +  obj - object memory is logged to
790ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
791ad0619ddSBarry Smith 
792ad0619ddSBarry Smith    Output Parameter:
793ad0619ddSBarry Smith .  result - memory allocated
794ad0619ddSBarry Smith 
795ad0619ddSBarry Smith    Level: developer
796ad0619ddSBarry Smith 
797ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
798ad0619ddSBarry Smith 
799ad0619ddSBarry Smith   Concepts: memory allocation
800ad0619ddSBarry Smith 
801ad0619ddSBarry Smith M*/
802d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
803d382aafbSBarry Smith 
804d382aafbSBarry Smith /*MC
805d382aafbSBarry Smith    PetscFree - Frees memory
806d382aafbSBarry Smith 
807eca87e8dSBarry Smith    Synopsis:
808eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
809eca87e8dSBarry Smith 
810eca87e8dSBarry Smith    Not Collective
811eca87e8dSBarry Smith 
812d382aafbSBarry Smith    Input Parameter:
813d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
814d382aafbSBarry Smith 
815d382aafbSBarry Smith    Level: beginner
816d382aafbSBarry Smith 
817d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
818d382aafbSBarry Smith 
819d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
820d382aafbSBarry Smith 
821d382aafbSBarry Smith   Concepts: memory allocation
822d382aafbSBarry Smith 
823d382aafbSBarry Smith M*/
82412537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
825d382aafbSBarry Smith 
826d382aafbSBarry Smith /*MC
827d382aafbSBarry Smith    PetscFreeVoid - Frees memory
828d382aafbSBarry Smith 
829d382aafbSBarry Smith    Synopsis:
830d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
831d382aafbSBarry Smith 
832eca87e8dSBarry Smith    Not Collective
833eca87e8dSBarry Smith 
834eca87e8dSBarry Smith    Input Parameter:
835eca87e8dSBarry Smith .   memory - memory to free
836eca87e8dSBarry Smith 
837d382aafbSBarry Smith    Level: beginner
838d382aafbSBarry Smith 
839d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
840d382aafbSBarry Smith 
841d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
842d382aafbSBarry Smith 
843d382aafbSBarry Smith   Concepts: memory allocation
844d382aafbSBarry Smith 
845d382aafbSBarry Smith M*/
8462714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
847d382aafbSBarry Smith 
848d382aafbSBarry Smith 
849d382aafbSBarry Smith /*MC
850d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
851d382aafbSBarry Smith 
852eca87e8dSBarry Smith    Synopsis:
853eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
854eca87e8dSBarry Smith 
855eca87e8dSBarry Smith    Not Collective
856eca87e8dSBarry Smith 
857d382aafbSBarry Smith    Input Parameter:
858d382aafbSBarry Smith +   memory1 - memory to free
859d382aafbSBarry Smith -   memory2 - 2nd memory to free
860d382aafbSBarry Smith 
861d382aafbSBarry Smith    Level: developer
862d382aafbSBarry Smith 
863d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
864d382aafbSBarry Smith 
865d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
866d382aafbSBarry Smith 
867d382aafbSBarry Smith   Concepts: memory allocation
868d382aafbSBarry Smith 
869d382aafbSBarry Smith M*/
870d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
871d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
872d382aafbSBarry Smith #else
87381dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
874d382aafbSBarry Smith #endif
875d382aafbSBarry Smith 
876d382aafbSBarry Smith /*MC
877d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
878d382aafbSBarry Smith 
879eca87e8dSBarry Smith    Synopsis:
880eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
881eca87e8dSBarry Smith 
882eca87e8dSBarry Smith    Not Collective
883eca87e8dSBarry Smith 
884d382aafbSBarry Smith    Input Parameter:
885d382aafbSBarry Smith +   memory1 - memory to free
886d382aafbSBarry Smith .   memory2 - 2nd memory to free
887d382aafbSBarry Smith -   memory3 - 3rd memory to free
888d382aafbSBarry Smith 
889d382aafbSBarry Smith    Level: developer
890d382aafbSBarry Smith 
891d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
892d382aafbSBarry Smith 
893d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
894d382aafbSBarry Smith 
895d382aafbSBarry Smith   Concepts: memory allocation
896d382aafbSBarry Smith 
897d382aafbSBarry Smith M*/
898d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
899d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
900d382aafbSBarry Smith #else
90181dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
902d382aafbSBarry Smith #endif
903d382aafbSBarry Smith 
904d382aafbSBarry Smith /*MC
905d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
906d382aafbSBarry Smith 
907eca87e8dSBarry Smith    Synopsis:
908eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
909eca87e8dSBarry Smith 
910eca87e8dSBarry Smith    Not Collective
911eca87e8dSBarry Smith 
912d382aafbSBarry Smith    Input Parameter:
913d382aafbSBarry Smith +   m1 - memory to free
914d382aafbSBarry Smith .   m2 - 2nd memory to free
915d382aafbSBarry Smith .   m3 - 3rd memory to free
916d382aafbSBarry Smith -   m4 - 4th memory to free
917d382aafbSBarry Smith 
918d382aafbSBarry Smith    Level: developer
919d382aafbSBarry Smith 
920d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
921d382aafbSBarry Smith 
922d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
923d382aafbSBarry Smith 
924d382aafbSBarry Smith   Concepts: memory allocation
925d382aafbSBarry Smith 
926d382aafbSBarry Smith M*/
927d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
928d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
929d382aafbSBarry Smith #else
93081dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
931d382aafbSBarry Smith #endif
932d382aafbSBarry Smith 
933d382aafbSBarry Smith /*MC
934d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
935d382aafbSBarry Smith 
936eca87e8dSBarry Smith    Synopsis:
937eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
938eca87e8dSBarry Smith 
939eca87e8dSBarry Smith    Not Collective
940eca87e8dSBarry Smith 
941d382aafbSBarry Smith    Input Parameter:
942d382aafbSBarry Smith +   m1 - memory to free
943d382aafbSBarry Smith .   m2 - 2nd memory to free
944d382aafbSBarry Smith .   m3 - 3rd memory to free
945d382aafbSBarry Smith .   m4 - 4th memory to free
946d382aafbSBarry Smith -   m5 - 5th memory to free
947d382aafbSBarry Smith 
948d382aafbSBarry Smith    Level: developer
949d382aafbSBarry Smith 
950d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
951d382aafbSBarry Smith 
952d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
953d382aafbSBarry Smith 
954d382aafbSBarry Smith   Concepts: memory allocation
955d382aafbSBarry Smith 
956d382aafbSBarry Smith M*/
957d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
958d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
959d382aafbSBarry Smith #else
96081dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
961d382aafbSBarry Smith #endif
962d382aafbSBarry Smith 
963d382aafbSBarry Smith 
964d382aafbSBarry Smith /*MC
965d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
966d382aafbSBarry Smith 
967eca87e8dSBarry Smith    Synopsis:
968eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
969eca87e8dSBarry Smith 
970eca87e8dSBarry Smith    Not Collective
971eca87e8dSBarry Smith 
972d382aafbSBarry Smith    Input Parameter:
973d382aafbSBarry Smith +   m1 - memory to free
974d382aafbSBarry Smith .   m2 - 2nd memory to free
975d382aafbSBarry Smith .   m3 - 3rd memory to free
976d382aafbSBarry Smith .   m4 - 4th memory to free
977d382aafbSBarry Smith .   m5 - 5th memory to free
978d382aafbSBarry Smith -   m6 - 6th memory to free
979d382aafbSBarry Smith 
980d382aafbSBarry Smith 
981d382aafbSBarry Smith    Level: developer
982d382aafbSBarry Smith 
983d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
984d382aafbSBarry Smith 
985d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
986d382aafbSBarry Smith 
987d382aafbSBarry Smith   Concepts: memory allocation
988d382aafbSBarry Smith 
989d382aafbSBarry Smith M*/
990d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
991d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
992d382aafbSBarry Smith #else
99381dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
994d382aafbSBarry Smith #endif
995d382aafbSBarry Smith 
996d382aafbSBarry Smith /*MC
997d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
998d382aafbSBarry Smith 
999eca87e8dSBarry Smith    Synopsis:
1000eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1001eca87e8dSBarry Smith 
1002eca87e8dSBarry Smith    Not Collective
1003eca87e8dSBarry Smith 
1004d382aafbSBarry Smith    Input Parameter:
1005d382aafbSBarry Smith +   m1 - memory to free
1006d382aafbSBarry Smith .   m2 - 2nd memory to free
1007d382aafbSBarry Smith .   m3 - 3rd memory to free
1008d382aafbSBarry Smith .   m4 - 4th memory to free
1009d382aafbSBarry Smith .   m5 - 5th memory to free
1010d382aafbSBarry Smith .   m6 - 6th memory to free
1011d382aafbSBarry Smith -   m7 - 7th memory to free
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith 
1014d382aafbSBarry Smith    Level: developer
1015d382aafbSBarry Smith 
1016d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1017d382aafbSBarry Smith 
1018d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1019d382aafbSBarry Smith           PetscMalloc7()
1020d382aafbSBarry Smith 
1021d382aafbSBarry Smith   Concepts: memory allocation
1022d382aafbSBarry Smith 
1023d382aafbSBarry Smith M*/
1024d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1025d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1026d382aafbSBarry Smith #else
102781dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1028d382aafbSBarry Smith #endif
1029d382aafbSBarry Smith 
1030014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1031014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1032014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1033014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1034d382aafbSBarry Smith 
1035d382aafbSBarry Smith /*
1036a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1037a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1038a5057860SBarry Smith   timing etc.
1039a5057860SBarry Smith */
1040a5057860SBarry Smith typedef double PetscLogDouble;
1041a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1042a5057860SBarry Smith 
1043a5057860SBarry Smith /*
104466d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1045d382aafbSBarry Smith */
1046014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1047014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1048014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1049014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1050014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1051014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1052014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1053574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1054014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith /*E
1057d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1058d382aafbSBarry Smith 
1059d382aafbSBarry Smith    Level: beginner
1060d382aafbSBarry Smith 
1061d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1062d382aafbSBarry Smith 
1063d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1064d382aafbSBarry Smith           PetscDataTypeGetSize()
1065d382aafbSBarry Smith 
1066d382aafbSBarry Smith E*/
1067d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
10682d53ad75SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;
10696a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1070d382aafbSBarry Smith 
1071d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1072d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1073d382aafbSBarry Smith #else
1074ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1075d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
107659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
107759a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1078d382aafbSBarry Smith #else
1079d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1080d382aafbSBarry Smith #endif
1081d382aafbSBarry Smith #endif
1082ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1083d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
108459a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
108559a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1086d382aafbSBarry Smith #else
1087d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1088d382aafbSBarry Smith #endif
1089d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1090d382aafbSBarry Smith 
1091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1093014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1094d382aafbSBarry Smith 
1095d382aafbSBarry Smith /*
1096d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1097d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1098d382aafbSBarry Smith    functionality and/or error checking.
1099d382aafbSBarry Smith */
1100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1101014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1102014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1103014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1104d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1105014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1109014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1110014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1111014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1112014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1115014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
11162f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1120014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
11212c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
112447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11256fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1126014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1127d382aafbSBarry Smith 
1128d382aafbSBarry Smith /*S
1129d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1130d382aafbSBarry Smith 
1131d382aafbSBarry Smith   Level: intermediate
1132d382aafbSBarry Smith 
1133d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1134d382aafbSBarry Smith S*/
1135d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1136d382aafbSBarry Smith 
1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1140d382aafbSBarry Smith 
1141d382aafbSBarry Smith /*
1142d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1143d382aafbSBarry Smith */
1144014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
11457c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1146014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11472414b3c7SJed Brown #else
11482414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11492414b3c7SJed Brown #endif
11502414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1151014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1152014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1153d9822059SBarry Smith #else
1154d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1155d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1156d9822059SBarry Smith #endif
1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1158d382aafbSBarry Smith 
1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1161eb3f98d2SBarry Smith 
1162d382aafbSBarry Smith /*S
1163d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1164d382aafbSBarry Smith 
1165d382aafbSBarry Smith    Level: beginner
1166d382aafbSBarry Smith 
11672981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1168d382aafbSBarry Smith 
11691890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1170d382aafbSBarry Smith S*/
1171d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1172d382aafbSBarry Smith 
1173d382aafbSBarry Smith /*S
1174d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1175d382aafbSBarry Smith       by string name
1176d382aafbSBarry Smith 
1177d382aafbSBarry Smith    Level: advanced
1178d382aafbSBarry Smith 
11792981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1180d382aafbSBarry Smith S*/
1181d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1182d382aafbSBarry Smith 
1183e4d1774bSDmitry Karpeev /*S
1184e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1185e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1186e4d1774bSDmitry Karpeev 
1187e4d1774bSDmitry Karpeev    Level: advanced
1188e4d1774bSDmitry Karpeev 
11892981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1190e4d1774bSDmitry Karpeev S*/
1191e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1192e4d1774bSDmitry Karpeev 
1193d382aafbSBarry Smith /*E
1194d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1195d382aafbSBarry Smith 
1196d382aafbSBarry Smith   Level: beginner
1197d382aafbSBarry Smith 
1198d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1199d382aafbSBarry Smith 
1200d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1201d382aafbSBarry Smith 
1202d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1203d382aafbSBarry Smith 
1204d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1205d382aafbSBarry Smith 
1206d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1207d382aafbSBarry Smith 
1208d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1209d382aafbSBarry Smith E*/
1210d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1211d382aafbSBarry Smith 
12122c8e378dSBarry Smith #include <petscviewer.h>
12132c8e378dSBarry Smith #include <petscoptions.h>
1214d382aafbSBarry Smith 
12150700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1216014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1217014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1219d382aafbSBarry Smith 
1220d382aafbSBarry Smith /*
1221d382aafbSBarry Smith    Routines that get memory usage information from the OS
1222d382aafbSBarry Smith */
1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1227d382aafbSBarry Smith 
1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*);
1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*);
1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1232d382aafbSBarry Smith 
1233d382aafbSBarry Smith /*
1234d382aafbSBarry Smith    Initialization of PETSc
1235d382aafbSBarry Smith */
1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1246d382aafbSBarry Smith 
1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]);
1249d382aafbSBarry Smith 
1250014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1258d382aafbSBarry Smith 
1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1263d382aafbSBarry Smith 
1264d382aafbSBarry Smith /*
1265d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12662981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1267d382aafbSBarry Smith */
1268638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1269638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1270638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1271d382aafbSBarry Smith 
1272d382aafbSBarry Smith /*
1273d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1274d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1275503cfb0cSBarry Smith 
1276503cfb0cSBarry Smith    Level: developer
1277503cfb0cSBarry Smith 
1278503cfb0cSBarry Smith .seealso: PetscUseMethod()
1279d382aafbSBarry Smith */
1280d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1281d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1282d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1283d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1284d382aafbSBarry Smith   }
1285503cfb0cSBarry Smith 
1286503cfb0cSBarry Smith /*
1287503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1288503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1289503cfb0cSBarry Smith 
1290503cfb0cSBarry Smith    Level: developer
1291503cfb0cSBarry Smith 
1292503cfb0cSBarry Smith .seealso: PetscTryMethod()
1293503cfb0cSBarry Smith */
1294d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1295d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1296d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1297d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1298703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1299d382aafbSBarry Smith   }
1300503cfb0cSBarry Smith 
1301d382aafbSBarry Smith /*
1302d382aafbSBarry Smith     Functions that can act on any PETSc object.
1303d382aafbSBarry Smith */
1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1333d382aafbSBarry Smith 
1334d382aafbSBarry Smith /*MC
1335d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1336d382aafbSBarry Smith 
1337eca87e8dSBarry Smith     Synopsis:
1338eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1339eca87e8dSBarry Smith 
1340ad4df100SBarry Smith    Logically Collective on PetscObject
1341d382aafbSBarry Smith 
1342d382aafbSBarry Smith    Input Parameters:
1343d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1344d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1345d382aafbSBarry Smith .  name - name associated with the child function
1346d382aafbSBarry Smith .  fname - name of the function
1347d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1348d382aafbSBarry Smith 
1349d382aafbSBarry Smith    Level: advanced
1350d382aafbSBarry Smith 
1351d382aafbSBarry Smith 
1352d382aafbSBarry Smith    Notes:
1353d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1354d382aafbSBarry Smith 
1355d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1356d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1357d382aafbSBarry Smith 
1358d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
135920de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1360d382aafbSBarry Smith    enabled.
1361d382aafbSBarry Smith 
1362d382aafbSBarry Smith    Concepts: objects^composing functions
1363d382aafbSBarry Smith    Concepts: composing functions
1364d382aafbSBarry Smith    Concepts: functions^querying
1365d382aafbSBarry Smith    Concepts: objects^querying
1366d382aafbSBarry Smith    Concepts: querying objects
1367d382aafbSBarry Smith 
1368d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1369d382aafbSBarry Smith M*/
1370d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1371d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1372d382aafbSBarry Smith #else
1373d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1374d382aafbSBarry Smith #endif
1375d382aafbSBarry Smith 
1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject);
1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject);
1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1391d382aafbSBarry Smith 
13927d5d4d99SBarry Smith typedef void* PetscDLHandle;
1393e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
1394e4d177b5SBarry Smith extern PetscErrorCode  PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
13957d5d4d99SBarry Smith extern PetscErrorCode  PetscDLClose(PetscDLHandle *);
13967d5d4d99SBarry Smith extern PetscErrorCode  PetscDLSym(PetscDLHandle,const char[],void **);
13977d5d4d99SBarry Smith 
1398d382aafbSBarry Smith /*
1399d382aafbSBarry Smith     Defines PETSc error handling.
1400d382aafbSBarry Smith */
14012c8e378dSBarry Smith #include <petscerror.h>
1402d382aafbSBarry Smith 
14035fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1404a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
14055fe58b6fSBarry Smith #endif
14067eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1407a64a8e02SBarry Smith 
1408d382aafbSBarry Smith /*S
1409503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1410d382aafbSBarry Smith 
14111d0fab5eSBarry Smith    Level: developer
1412d382aafbSBarry Smith 
14131d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14141d0fab5eSBarry Smith 
14152981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1416d382aafbSBarry Smith S*/
1417d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1418d382aafbSBarry Smith 
1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*);
1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*);
1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject);
1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]);
1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *);
1425d382aafbSBarry Smith 
1426d382aafbSBarry Smith /*
1427503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1428d382aafbSBarry Smith   link libraries that will be loaded as needed.
1429d382aafbSBarry Smith */
1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*);
1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1434d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1435d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1436d382aafbSBarry Smith #else
1437d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1438d382aafbSBarry Smith #endif
1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *);
1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer);
1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []);
1442065533a5SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,const char ***,int*);
1443d382aafbSBarry Smith 
144448703020SDmitry Karpeev /*
144548703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
144648703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
144748703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
144848703020SDmitry Karpeev */
1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*);
1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer);
14532981ebdbSBarry Smith 
1454d382aafbSBarry Smith /*S
1455d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1456d382aafbSBarry Smith 
1457d382aafbSBarry Smith    Level: advanced
1458d382aafbSBarry Smith 
145920de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1460d382aafbSBarry Smith 
1461d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1462d382aafbSBarry Smith S*/
1463d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1464014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1472d382aafbSBarry Smith 
1473d382aafbSBarry Smith /*
1474a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
147505846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
147605846914SDmitry Karpeev */
14772c8e378dSBarry Smith #include <petscshell.h>
147805846914SDmitry Karpeev 
147905846914SDmitry Karpeev /*
1480d382aafbSBarry Smith      Useful utility routines
1481d382aafbSBarry Smith */
1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1488d382aafbSBarry Smith 
1489503cfb0cSBarry Smith /*
1490ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1491503cfb0cSBarry Smith 
1492503cfb0cSBarry Smith     Notes: This is useful in cases like
1493503cfb0cSBarry Smith $     int        *a;
1494ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1495ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1496503cfb0cSBarry Smith */
1497d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1498503cfb0cSBarry Smith 
1499d382aafbSBarry Smith /*
1500d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1501d382aafbSBarry Smith */
15022c8e378dSBarry Smith #include <petscdraw.h>
1503d382aafbSBarry Smith 
1504cae2f346SBarry Smith #if defined(PETSC_HAVE_VALGRIND)
1505cae2f346SBarry Smith #  include <valgrind/valgrind.h>
1506cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND
1507cae2f346SBarry Smith #else
1508cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE
1509cae2f346SBarry Smith #endif
1510cae2f346SBarry Smith 
1511d382aafbSBarry Smith /*
1512d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1513d382aafbSBarry Smith */
15142c8e378dSBarry Smith #include <petsc-private/petscimpl.h>
1515503cfb0cSBarry Smith 
1516238ccf28SShri Abhyankar 
1517d382aafbSBarry Smith /*MC
1518d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1519d382aafbSBarry Smith 
1520d382aafbSBarry Smith    Synopsis:
1521d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1522d382aafbSBarry Smith 
1523eca87e8dSBarry Smith     Not Collective
1524eca87e8dSBarry Smith 
1525d382aafbSBarry Smith     Input Parameters:
1526d382aafbSBarry Smith .   format - the usual printf() format string
1527d382aafbSBarry Smith 
1528d382aafbSBarry Smith    Options Database Keys:
1529d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1530d382aafbSBarry Smith          (default) stderr
1531d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1532d382aafbSBarry Smith           error is handled.)
1533d382aafbSBarry Smith 
1534d382aafbSBarry Smith    Notes: Use
1535d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1536d382aafbSBarry Smith $                        error is handled.) and
1537d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1538c9a19010SBarry Smith $        of you can use your own function
1539d382aafbSBarry Smith 
1540d382aafbSBarry Smith           Use
1541d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1542d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1543d382aafbSBarry Smith 
1544d382aafbSBarry Smith           Use
1545d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1546d382aafbSBarry Smith 
1547d382aafbSBarry Smith    Level: developer
1548d382aafbSBarry Smith 
1549d382aafbSBarry Smith     Fortran Note:
1550d382aafbSBarry Smith     This routine is not supported in Fortran.
1551d382aafbSBarry Smith 
1552d382aafbSBarry Smith     Concepts: error messages^printing
1553d382aafbSBarry Smith     Concepts: printing^error messages
1554d382aafbSBarry Smith 
1555c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1556d382aafbSBarry Smith M*/
1557014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1558d382aafbSBarry Smith 
1559d382aafbSBarry Smith /*MC
1560d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1561d382aafbSBarry Smith 
1562d382aafbSBarry Smith    Synopsis:
1563d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1564d382aafbSBarry Smith 
1565eca87e8dSBarry Smith     Not Collective
1566eca87e8dSBarry Smith 
1567d382aafbSBarry Smith     Input Parameters:
1568d382aafbSBarry Smith .   format - the usual printf() format string
1569d382aafbSBarry Smith 
1570d382aafbSBarry Smith    Level: developer
1571d382aafbSBarry Smith 
1572d382aafbSBarry Smith     Fortran Note:
1573d382aafbSBarry Smith     This routine is not supported in Fortran.
1574d382aafbSBarry Smith 
1575d382aafbSBarry Smith     Concepts: help messages^printing
1576d382aafbSBarry Smith     Concepts: printing^help messages
1577d382aafbSBarry Smith 
1578d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1579d382aafbSBarry Smith M*/
1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1581d382aafbSBarry Smith 
1582fcfd50ebSBarry Smith /*
1583fcfd50ebSBarry Smith      Defines PETSc profiling.
1584fcfd50ebSBarry Smith */
15852c8e378dSBarry Smith #include <petsclog.h>
1586fcfd50ebSBarry Smith 
1587fcfd50ebSBarry Smith /*
1588fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1589fcfd50ebSBarry Smith */
1590fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1591014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll;
1592fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1593fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1594fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1595fcfd50ebSBarry Smith #else
1596fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1597fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1598fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1599fcfd50ebSBarry Smith #endif
1600fcfd50ebSBarry Smith 
1601fcfd50ebSBarry Smith /*
1602fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1603fcfd50ebSBarry Smith */
1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1611fcfd50ebSBarry Smith 
1612fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1613fcfd50ebSBarry Smith #include <stdarg.h>
1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1617fcfd50ebSBarry Smith 
1618fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1620fcfd50ebSBarry Smith #endif
1621fcfd50ebSBarry Smith 
1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1625d382aafbSBarry Smith 
1626d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1628784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*);
1629d382aafbSBarry Smith #endif
1630d382aafbSBarry Smith 
1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1638d382aafbSBarry Smith 
1639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1640d382aafbSBarry Smith 
1641d382aafbSBarry Smith /*S
1642d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1643d382aafbSBarry Smith 
1644d382aafbSBarry Smith    Level: advanced
1645d382aafbSBarry Smith 
1646d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1647d382aafbSBarry Smith S*/
1648014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1649d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1655d382aafbSBarry Smith 
1656d382aafbSBarry Smith /*
1657d382aafbSBarry Smith    For use in debuggers
1658d382aafbSBarry Smith */
1659014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1660014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1661014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1662014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1663014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1664d382aafbSBarry Smith 
1665d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1666d382aafbSBarry Smith #include <memory.h>
1667d382aafbSBarry Smith #endif
1668d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1669d382aafbSBarry Smith #include <stdlib.h>
1670d382aafbSBarry Smith #endif
1671d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1672d382aafbSBarry Smith #include <strings.h>
1673d382aafbSBarry Smith #endif
1674d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1675d382aafbSBarry Smith #include <string.h>
1676d382aafbSBarry Smith #endif
16776c7e564aSBarry Smith 
16784a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1679d382aafbSBarry Smith #include <xmmintrin.h>
1680d382aafbSBarry Smith #endif
1681d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1682d382aafbSBarry Smith #include <stdint.h>
1683d382aafbSBarry Smith #endif
1684d382aafbSBarry Smith 
1685fcfd50ebSBarry Smith #undef __FUNCT__
1686fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1687d382aafbSBarry Smith /*@C
1688d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1689d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1690d382aafbSBarry Smith    PetscMemmove() in that case.
1691d382aafbSBarry Smith 
1692d382aafbSBarry Smith    Not Collective
1693d382aafbSBarry Smith 
1694d382aafbSBarry Smith    Input Parameters:
1695d382aafbSBarry Smith +  b - pointer to initial memory space
1696d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1697d382aafbSBarry Smith 
1698d382aafbSBarry Smith    Output Parameter:
1699d382aafbSBarry Smith .  a - pointer to copy space
1700d382aafbSBarry Smith 
1701d382aafbSBarry Smith    Level: intermediate
1702d382aafbSBarry Smith 
1703d382aafbSBarry Smith    Compile Option:
1704d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1705d382aafbSBarry Smith                                   for memory copies on double precision values.
1706d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1707d382aafbSBarry Smith                                   for memory copies on double precision values.
1708d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1709d382aafbSBarry Smith                                   for memory copies on double precision values.
1710d382aafbSBarry Smith 
1711d382aafbSBarry Smith    Note:
1712d382aafbSBarry Smith    This routine is analogous to memcpy().
1713d382aafbSBarry Smith 
1714503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1715503cfb0cSBarry Smith 
1716d382aafbSBarry Smith   Concepts: memory^copying
1717d382aafbSBarry Smith   Concepts: copying^memory
1718d382aafbSBarry Smith 
1719d382aafbSBarry Smith .seealso: PetscMemmove()
1720d382aafbSBarry Smith 
1721d382aafbSBarry Smith @*/
17227087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1723d382aafbSBarry Smith {
1724d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1725d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1726d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1727a7e36092SMatthew G Knepley   PetscFunctionBegin;
1728e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1729e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1730a7e36092SMatthew G Knepley #else
1731d382aafbSBarry Smith   PetscFunctionBegin;
1732a7e36092SMatthew G Knepley #endif
1733d382aafbSBarry Smith   if (a != b) {
1734d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1735e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1736d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1737d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1738d382aafbSBarry Smith #endif
1739d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1740d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1741d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1742d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1743d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1744d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1745d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1746d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1747d382aafbSBarry Smith #else
1748d382aafbSBarry Smith       size_t      i;
1749d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1750d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1751d382aafbSBarry Smith #endif
1752d382aafbSBarry Smith     } else {
1753d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1754d382aafbSBarry Smith     }
1755d382aafbSBarry Smith #else
1756d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1757d382aafbSBarry Smith #endif
1758d382aafbSBarry Smith   }
1759d382aafbSBarry Smith   PetscFunctionReturn(0);
1760d382aafbSBarry Smith }
1761d382aafbSBarry Smith 
1762d382aafbSBarry Smith /*@C
1763d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1764d382aafbSBarry Smith 
1765d382aafbSBarry Smith    Not Collective
1766d382aafbSBarry Smith 
1767d382aafbSBarry Smith    Input Parameters:
1768d382aafbSBarry Smith +  a - pointer to beginning memory location
1769d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1770d382aafbSBarry Smith 
1771d382aafbSBarry Smith    Level: intermediate
1772d382aafbSBarry Smith 
1773d382aafbSBarry Smith    Compile Option:
1774d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1775d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1776d382aafbSBarry Smith 
1777503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1778503cfb0cSBarry Smith 
1779d382aafbSBarry Smith    Concepts: memory^zeroing
1780d382aafbSBarry Smith    Concepts: zeroing^memory
1781d382aafbSBarry Smith 
1782d382aafbSBarry Smith .seealso: PetscMemcpy()
1783d382aafbSBarry Smith @*/
17847087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1785d382aafbSBarry Smith {
1786d382aafbSBarry Smith   if (n > 0) {
1787d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1788e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1789d382aafbSBarry Smith #endif
1790d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1791d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1792d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1793d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1794d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1795d382aafbSBarry Smith     } else {
1796d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1797d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1798d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1799d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1800d382aafbSBarry Smith     } else {
1801d382aafbSBarry Smith #endif
1802d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1803d382aafbSBarry Smith       bzero((char *)a,n);
1804d382aafbSBarry Smith #else
1805d382aafbSBarry Smith       memset((char*)a,0,n);
1806d382aafbSBarry Smith #endif
1807d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1808d382aafbSBarry Smith     }
1809d382aafbSBarry Smith #endif
1810d382aafbSBarry Smith   }
1811d382aafbSBarry Smith   return 0;
1812d382aafbSBarry Smith }
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith /*MC
1815d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1816d382aafbSBarry Smith 
1817eca87e8dSBarry Smith    Synopsis:
1818eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1819eca87e8dSBarry Smith 
1820d382aafbSBarry Smith    Not Collective
1821d382aafbSBarry Smith 
1822d382aafbSBarry Smith    Input Parameters:
1823d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1824d382aafbSBarry Smith .  n - number of elements to fetch
1825d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
182650d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1827d382aafbSBarry Smith 
1828d382aafbSBarry Smith    Level: developer
1829d382aafbSBarry Smith 
1830d382aafbSBarry Smith    Notes:
1831d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1832d382aafbSBarry Smith 
183350d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
183450d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
183550d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
183663cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
183763cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
183863cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1839d382aafbSBarry Smith 
1840d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1841d382aafbSBarry Smith    address).
1842d382aafbSBarry Smith 
1843d382aafbSBarry Smith    Concepts: memory
1844d382aafbSBarry Smith M*/
1845d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1846d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1847d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1848d382aafbSBarry Smith   } while (0)
1849d382aafbSBarry Smith 
1850d382aafbSBarry Smith /*
1851e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1852d382aafbSBarry Smith */
18532c8e378dSBarry Smith #include <petscmatlab.h>
1854d382aafbSBarry Smith 
1855d382aafbSBarry Smith /*
1856d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1857d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1858d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1859d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1860e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1861d382aafbSBarry Smith */
1862d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1863d382aafbSBarry Smith 
1864d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1865d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1866d382aafbSBarry Smith #endif
1867d382aafbSBarry Smith 
18685a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18695a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1870d382aafbSBarry Smith #endif
1871d382aafbSBarry Smith 
1872d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1873d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1874d382aafbSBarry Smith #endif
1875d382aafbSBarry Smith 
1876d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1877d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1878d382aafbSBarry Smith #endif
1879d382aafbSBarry Smith 
1880d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1881d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1882d382aafbSBarry Smith #endif
1883d382aafbSBarry Smith 
1884d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1885d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1886d382aafbSBarry Smith #endif
1887d382aafbSBarry Smith 
1888d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1889d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1890d382aafbSBarry Smith #endif
1891d382aafbSBarry Smith 
1892d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1893d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1894d382aafbSBarry Smith #endif
1895d382aafbSBarry Smith 
1896d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1897d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1898d382aafbSBarry Smith #endif
1899d382aafbSBarry Smith 
1900d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1901d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1902d382aafbSBarry Smith #endif
1903d382aafbSBarry Smith 
1904d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1905d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1906d382aafbSBarry Smith #endif
1907d382aafbSBarry Smith 
1908d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1909d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1910d382aafbSBarry Smith #endif
1911d382aafbSBarry Smith 
1912d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1913d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1914d382aafbSBarry Smith #endif
1915d382aafbSBarry Smith 
1916d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1917d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1918d382aafbSBarry Smith #endif
1919d382aafbSBarry Smith 
1920d382aafbSBarry Smith #endif
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith /*
1923d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1924d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1925d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1926d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1927d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1928d382aafbSBarry Smith */
1929d382aafbSBarry Smith #if defined(__cplusplus)
1930014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC
1931d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1932d382aafbSBarry Smith #define EXTERN_C_END }
1933d382aafbSBarry Smith #else
1934014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN
1935d382aafbSBarry Smith #define EXTERN_C_BEGIN
1936d382aafbSBarry Smith #define EXTERN_C_END
1937d382aafbSBarry Smith #endif
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1940d382aafbSBarry Smith 
1941d382aafbSBarry Smith /*MC
1942d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1943d382aafbSBarry Smith         communication
1944d382aafbSBarry Smith 
1945d382aafbSBarry Smith    Level: beginner
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1948d382aafbSBarry Smith 
1949d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1950d382aafbSBarry Smith M*/
1951d382aafbSBarry Smith 
1952d382aafbSBarry Smith /*MC
1953d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1954d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1955d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1956d382aafbSBarry Smith 
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith    Level: beginner
1959d382aafbSBarry Smith 
1960d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1961d382aafbSBarry Smith M*/
1962d382aafbSBarry Smith 
1963d382aafbSBarry Smith /*MC
1964d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith    Level: beginner
1967d382aafbSBarry Smith 
1968d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1969d382aafbSBarry Smith M*/
1970d382aafbSBarry Smith 
1971d382aafbSBarry Smith /*MC
1972d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1973d382aafbSBarry Smith    Level: beginner
1974d382aafbSBarry Smith 
1975d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1976d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1977d382aafbSBarry Smith 
1978d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1979d382aafbSBarry Smith M*/
1980d382aafbSBarry Smith 
1981d382aafbSBarry Smith /*MC
1982d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1983d382aafbSBarry Smith 
1984d382aafbSBarry Smith    Level: beginner
1985d382aafbSBarry Smith 
1986d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1987d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1990d382aafbSBarry Smith M*/
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith /*MC
1993d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1994d382aafbSBarry Smith 
1995d382aafbSBarry Smith    Level: beginner
1996d382aafbSBarry Smith 
1997d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1998d382aafbSBarry Smith           pass this value
1999d382aafbSBarry Smith 
2000d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2001d382aafbSBarry Smith M*/
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2004d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2005014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2006014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2007d382aafbSBarry Smith #else
2008d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2009d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2010d382aafbSBarry Smith #endif
2011d382aafbSBarry Smith #endif
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2014d382aafbSBarry Smith 
2015d382aafbSBarry Smith /* Limit MPI to 32-bits */
2016d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2017d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2018d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2019d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2020d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2021d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2022d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2023d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2026e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2027e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2028eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2029eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2030d382aafbSBarry Smith 
2031d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2032e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2033eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2034d382aafbSBarry Smith #else
2035d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2036d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2037d382aafbSBarry Smith #endif
2038d382aafbSBarry Smith 
2039d382aafbSBarry Smith #else
2040d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2041d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2042d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2043d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2044d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2045d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2046d382aafbSBarry Smith #endif
2047d382aafbSBarry Smith 
2048d382aafbSBarry Smith /*
20492981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2050d382aafbSBarry Smith */
2051d382aafbSBarry Smith #if defined(hz)
2052d382aafbSBarry Smith #undef hz
2053d382aafbSBarry Smith #endif
2054d382aafbSBarry Smith 
2055d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2056d382aafbSBarry Smith 
2057d382aafbSBarry Smith 
2058d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2059d382aafbSBarry Smith #include <limits.h>
2060d382aafbSBarry Smith #endif
2061d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2062d382aafbSBarry Smith #include <sys/param.h>
2063d382aafbSBarry Smith #endif
2064d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2065d382aafbSBarry Smith #include <sys/types.h>
2066d382aafbSBarry Smith #endif
2067d382aafbSBarry Smith #if defined(MAXPATHLEN)
2068d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2069d382aafbSBarry Smith #elif defined(MAX_PATH)
2070d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2071d382aafbSBarry Smith #elif defined(_MAX_PATH)
2072d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2073d382aafbSBarry Smith #else
2074d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2075d382aafbSBarry Smith #endif
2076d382aafbSBarry Smith 
2077d382aafbSBarry Smith /* Special support for C++ */
20782c8e378dSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX)
20792c8e378dSBarry Smith #include <petscsys.hh>
20802c8e378dSBarry Smith #endif
20816c7e564aSBarry Smith 
2082d382aafbSBarry Smith /*MC
2083d382aafbSBarry Smith 
2084d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2085d382aafbSBarry Smith 
2086d382aafbSBarry Smith $    1) classic Fortran 77 style
2087d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2088d382aafbSBarry Smith $       XXX variablename
2089d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2090d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2091d382aafbSBarry Smith $
2092d382aafbSBarry Smith $    2) classic Fortran 90 style
2093d1716517SSatish Balay $#include "finclude/petscXXX.h"
2094d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2095d382aafbSBarry Smith $       XXX variablename
2096d382aafbSBarry Smith $
2097d382aafbSBarry Smith $    3) Using Fortran modules
2098d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2099d382aafbSBarry Smith $         use petscXXXX
2100d382aafbSBarry Smith $       XXX variablename
2101d382aafbSBarry Smith $
2102d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2103d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2104d382aafbSBarry Smith $         use petscXXXX
2105d382aafbSBarry Smith $       type(XXX) variablename
2106e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2107d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2108d382aafbSBarry Smith 
2109d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2110d382aafbSBarry Smith 
2111d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2112d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2113d382aafbSBarry Smith $        integer variablename
2114d382aafbSBarry Smith $
2115d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2116d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2117d382aafbSBarry Smith 
2118d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2119d382aafbSBarry Smith for only a few PETSc functions.
2120d382aafbSBarry Smith 
2121d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2122d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2123d382aafbSBarry Smith you cannot have something like
2124d382aafbSBarry Smith $      PetscInt row,col
2125d382aafbSBarry Smith $      PetscScalar val
2126d382aafbSBarry Smith $        ...
2127d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2128d382aafbSBarry Smith You must instead have
2129d382aafbSBarry Smith $      PetscInt row(1),col(1)
2130d382aafbSBarry Smith $      PetscScalar val(1)
2131d382aafbSBarry Smith $        ...
2132d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2133d382aafbSBarry Smith 
2134d382aafbSBarry Smith 
2135d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2136d382aafbSBarry Smith 
2137d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2138d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2139d382aafbSBarry Smith 
2140d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2141d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2142d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2143d382aafbSBarry Smith 
2144d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2145e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2146d382aafbSBarry Smith 
2147d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2148d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2149d382aafbSBarry Smith 
2150d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2151d382aafbSBarry Smith      automatically by "make allfortranstubs".
2152d382aafbSBarry Smith 
2153e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2154d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2155d382aafbSBarry Smith      include their predecessors
2156d382aafbSBarry Smith 
2157d382aafbSBarry Smith     Level: beginner
2158d382aafbSBarry Smith 
2159d382aafbSBarry Smith M*/
2160d382aafbSBarry Smith 
2161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2166014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
216727710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
2168d382aafbSBarry Smith 
2169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
217160e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
217617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
217717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2186d382aafbSBarry Smith 
2187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2189d382aafbSBarry Smith 
219076bdecfbSBarry Smith /*J
2191d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2192d382aafbSBarry Smith        with an optional dynamic library name, for example
2193d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2194d382aafbSBarry Smith 
2195d382aafbSBarry Smith    Level: beginner
2196d382aafbSBarry Smith 
2197e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2198d382aafbSBarry Smith    with the option --download-sprng
2199d382aafbSBarry Smith 
2200d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
220176bdecfbSBarry Smith J*/
220219fd82e9SBarry Smith typedef const char* PetscRandomType;
2203d382aafbSBarry Smith #define PETSCRAND       "rand"
2204d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2205d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2206d382aafbSBarry Smith 
2207d382aafbSBarry Smith /* Logging support */
2208014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2209d382aafbSBarry Smith 
2210014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]);
2211d382aafbSBarry Smith 
2212d382aafbSBarry Smith /*S
2213d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2214d382aafbSBarry Smith 
2215d382aafbSBarry Smith    Level: intermediate
2216d382aafbSBarry Smith 
2217d382aafbSBarry Smith   Concepts: random numbers
2218d382aafbSBarry Smith 
2219d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2220d382aafbSBarry Smith S*/
2221d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2222d382aafbSBarry Smith 
2223d382aafbSBarry Smith /* Dynamic creation and loading functions */
2224014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList;
2225014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled;
2226d382aafbSBarry Smith 
2227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []);
2228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
2229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void);
223019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
223219fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
22336d187b91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,const char[]);
2234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2235d382aafbSBarry Smith 
2236d382aafbSBarry Smith /*MC
2237d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2238d382aafbSBarry Smith 
2239d382aafbSBarry Smith   Synopsis:
22401890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2241d382aafbSBarry Smith 
2242d382aafbSBarry Smith   Not Collective
2243d382aafbSBarry Smith 
2244d382aafbSBarry Smith   Input Parameters:
2245d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2246d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2247d382aafbSBarry Smith . func_name   - The name of routine to create method context
2248d382aafbSBarry Smith - create_func - The creation routine itself
2249d382aafbSBarry Smith 
2250d382aafbSBarry Smith   Notes:
2251d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2252d382aafbSBarry Smith 
2253d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2254d382aafbSBarry Smith 
2255d382aafbSBarry Smith   Sample usage:
2256d382aafbSBarry Smith .vb
2257d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2258d382aafbSBarry Smith .ve
2259d382aafbSBarry Smith 
2260d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2261d382aafbSBarry Smith .vb
2262d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2263d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2264d382aafbSBarry Smith .ve
2265d382aafbSBarry Smith    or at runtime via the option
2266d382aafbSBarry Smith .vb
2267d382aafbSBarry Smith     -random_type my_random_name
2268d382aafbSBarry Smith .ve
2269d382aafbSBarry Smith 
2270d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2271d382aafbSBarry Smith 
2272d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2273d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2274d382aafbSBarry Smith 
2275d382aafbSBarry Smith   Level: advanced
2276d382aafbSBarry Smith 
2277d382aafbSBarry Smith .keywords: PetscRandom, register
2278d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2279d382aafbSBarry Smith M*/
2280d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2281d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2282d382aafbSBarry Smith #else
2283d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2284d382aafbSBarry Smith #endif
2285d382aafbSBarry Smith 
2286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2295d382aafbSBarry Smith 
2296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2303d382aafbSBarry Smith 
2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2317d382aafbSBarry Smith 
2318d382aafbSBarry Smith /*
2319d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2320d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2321d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2322d382aafbSBarry Smith   PetscBinarySeek().
2323d382aafbSBarry Smith */
2324d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2325d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2326d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2327d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2328d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2329d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2330d382aafbSBarry Smith 
2331d382aafbSBarry Smith /*E
2332d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2333d382aafbSBarry Smith 
2334d382aafbSBarry Smith   Level: advanced
2335d382aafbSBarry Smith 
2336d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2337d382aafbSBarry Smith E*/
2338d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2342d382aafbSBarry Smith 
2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2349d382aafbSBarry Smith 
2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2355d382aafbSBarry Smith 
2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2357d382aafbSBarry Smith 
2358d382aafbSBarry Smith /*E
2359d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2360d382aafbSBarry Smith 
2361d382aafbSBarry Smith   Level: beginner
2362d382aafbSBarry Smith 
2363d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2364d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2365d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2366d382aafbSBarry Smith E*/
23676fbadbe2SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2368d382aafbSBarry Smith 
2369d382aafbSBarry Smith /*MC
2370d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2371d382aafbSBarry Smith 
2372d382aafbSBarry Smith     Level: beginner
2373d382aafbSBarry Smith 
2374d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2375eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2376eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2377d382aafbSBarry Smith 
2378d382aafbSBarry Smith M*/
2379d382aafbSBarry Smith 
2380d382aafbSBarry Smith /*MC
2381d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2382d382aafbSBarry Smith                 value into that location
2383d382aafbSBarry Smith 
2384d382aafbSBarry Smith     Level: beginner
2385d382aafbSBarry Smith 
2386d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2387eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2388eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2389d382aafbSBarry Smith 
2390d382aafbSBarry Smith M*/
2391d382aafbSBarry Smith 
2392d382aafbSBarry Smith /*MC
2393d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2394d382aafbSBarry Smith 
2395d382aafbSBarry Smith     Level: beginner
2396d382aafbSBarry Smith 
2397d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith M*/
2400d382aafbSBarry Smith 
2401d382aafbSBarry Smith /*S
2402d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2403d382aafbSBarry Smith 
2404d382aafbSBarry Smith    Level: advanced
2405d382aafbSBarry Smith 
2406d382aafbSBarry Smith    Concepts: communicator, create
2407d382aafbSBarry Smith S*/
2408d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2409d382aafbSBarry Smith 
2410d382aafbSBarry Smith struct _n_PetscSubcomm {
2411d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2412d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2413d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2414d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2415d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2416d382aafbSBarry Smith };
2417d382aafbSBarry Smith 
2418638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
24196a6fc655SJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
2420638faf0bSHong Zhang 
2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2426d382aafbSBarry Smith 
242782a7e548SBarry Smith #include <petscctable.h>
242882a7e548SBarry Smith 
24296c7e564aSBarry Smith 
24309e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24319e03d832SJed Brown #undef __FUNCT__
24329e03d832SJed Brown #define __FUNCT__ "User provided function"
24339e03d832SJed Brown 
2434cae2f346SBarry Smith 
2435d382aafbSBarry Smith #endif
2436