1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 1973fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2073fca5a0SBarry Smith /* 2173fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2273fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2373fca5a0SBarry Smith */ 24216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2573fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2673fca5a0SBarry Smith # endif 27216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2873fca5a0SBarry Smith # define _BSD_SOURCE 2973fca5a0SBarry Smith # endif 3007f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3107f00807SSatish Balay # define _DEFAULT_SOURCE 3207f00807SSatish Balay # endif 33ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 34ea0fecefSShri Abhyankar # define _GNU_SOURCE 35ea0fecefSShri Abhyankar # endif 3673fca5a0SBarry Smith #endif 3773fca5a0SBarry Smith 38df4397b0SStefano Zampini #include <petscsystypes.h> 39df4397b0SStefano Zampini 40d382aafbSBarry Smith /* ========================================================================== */ 41d382aafbSBarry Smith /* 422c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 43d382aafbSBarry Smith */ 441ec50b02SJed Brown #if defined(__cplusplus) 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 461ec50b02SJed Brown #else 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 481ec50b02SJed Brown #endif 49d382aafbSBarry Smith 50c5e4d11fSDmitry Karpeev /* ========================================================================== */ 51c5e4d11fSDmitry Karpeev /* 52c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 531cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 541cc8b206SBarry Smith file within an extern "C". 55c5e4d11fSDmitry Karpeev */ 56c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 57c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 58c5e4d11fSDmitry Karpeev #endif 59c5e4d11fSDmitry Karpeev 60ed938b00SJed Brown #if defined(__cplusplus) 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 62ed938b00SJed Brown #else 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 64ed938b00SJed Brown #endif 65ed938b00SJed Brown 66ed938b00SJed Brown #if defined(__cplusplus) 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 68ed938b00SJed Brown #else 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 70ed938b00SJed Brown #endif 71ed938b00SJed Brown 7258c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7358c433abSLisandro Dalcin 74ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 75014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 76014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7826703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7926703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8026703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8126703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 83014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 84014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 86d382aafbSBarry Smith #else 87014dd563SJed Brown # define PETSC_DLLEXPORT 88014dd563SJed Brown # define PETSC_DLLIMPORT 8921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 90014dd563SJed Brown #endif 91014dd563SJed Brown 92014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 94014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 96014dd563SJed Brown #endif 97014dd563SJed Brown 981cc8b206SBarry Smith /* 991cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1001cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1011cc8b206SBarry Smith used from C and are always visible in the shared libraries 1021cc8b206SBarry Smith */ 1032c280183SJed Brown #if defined(__cplusplus) 104014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 105638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10621f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 107014dd563SJed Brown #else 108014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 109638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1106258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 111d382aafbSBarry Smith #endif 11227710113SBarry Smith 113193d546dSJacob Faibussowitsch #if defined(PETSC_USE_SINGLE_LIBRARY) 114193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_INTERN 115193d546dSJacob Faibussowitsch #else 116193d546dSJacob Faibussowitsch # define PETSC_SINGLE_LIBRARY_INTERN PETSC_EXTERN 117193d546dSJacob Faibussowitsch #endif 118193d546dSJacob Faibussowitsch 1190609f53bSJacob Faibussowitsch /* C++11 features */ 120030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 121030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 122030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 123030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 124030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 125030f984aSJacob Faibussowitsch #else 126030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 127030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 128030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 129030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 1300609f53bSJacob Faibussowitsch #endif /* __cplusplus && PETSC_HAVE_CXX_DIALECT_CXX11 */ 1310609f53bSJacob Faibussowitsch 1320609f53bSJacob Faibussowitsch /* C++14 features */ 1330609f53bSJacob Faibussowitsch #if defined(PETSC_HAVE_CXX_DIALECT_CXX14) 1340609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 PETSC_CONSTEXPR 1350609f53bSJacob Faibussowitsch #else 1360609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_14 137030f984aSJacob Faibussowitsch #endif 138030f984aSJacob Faibussowitsch 1390609f53bSJacob Faibussowitsch /* C++17 features */ 1400a996781SJunchao Zhang /* We met cases that the host CXX compiler (say mpicxx) supports C++17, but nvcc does not agree, even with -ccbin mpicxx! */ 1410a996781SJunchao Zhang #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) && (!defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_CUDA_DIALECT_CXX17)) 142030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 1430609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 PETSC_CONSTEXPR 144030f984aSJacob Faibussowitsch #else 145030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 1460609f53bSJacob Faibussowitsch # define PETSC_CONSTEXPR_17 147030f984aSJacob Faibussowitsch #endif 148030f984aSJacob Faibussowitsch 1492c8e378dSBarry Smith #include <petscversion.h> 150a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 151d382aafbSBarry Smith 152d382aafbSBarry Smith /* ========================================================================== */ 153d382aafbSBarry Smith 154d382aafbSBarry Smith /* 155d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 156d382aafbSBarry Smith 157d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 158d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 159d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 160d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 161d382aafbSBarry Smith mpicxx.h directly in their code 162d382aafbSBarry Smith */ 163fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 164d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 165fa9e63e2SJed Brown #endif 166fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 167d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 168fa9e63e2SJed Brown #endif 169e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 170e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 171e771154cSJed Brown #else 1722c8e378dSBarry Smith # include <mpi.h> 173e771154cSJed Brown #endif 17465013866SBarry Smith 1754e1ad211SJed Brown /*MC 1764e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1774e1ad211SJed Brown 1784e1ad211SJed Brown Notes: 1791393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1801393a3abSPatrick Sanan 1814e1ad211SJed Brown Typical usage is within normal code, 1824e1ad211SJed Brown 1834e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1844e1ad211SJed Brown 1854e1ad211SJed Brown but can also be used in the preprocessor, 1864e1ad211SJed Brown 1874e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1884e1ad211SJed Brown $ ... 1894e1ad211SJed Brown $ #else 1904e1ad211SJed Brown 1911393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1924e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1934e1ad211SJed Brown 1941393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1951393a3abSPatrick Sanan 1961393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1971393a3abSPatrick Sanan 1984e1ad211SJed Brown Developer Notes: 1994e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 2004e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 2014e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 2024e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 2034e1ad211SJed Brown 2044e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 2054e1ad211SJed Brown implementation of variadic macros. 2064e1ad211SJed Brown 2074e1ad211SJed Brown Level: developer 2084e1ad211SJed Brown M*/ 2094e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2104e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2114e1ad211SJed Brown # define PetscDefined_arg_ shift, 2124e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2134e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2144e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 215c7faf32eSJacob Faibussowitsch # define PetscDefined____(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 216c7faf32eSJacob Faibussowitsch # define PetscDefined___(value) PetscDefined____(PetscDefined_arg_ ## value) 217c7faf32eSJacob Faibussowitsch # define PetscDefined__(d) PetscDefined___(d) 218c7faf32eSJacob Faibussowitsch # define PetscDefined_(d) PetscDefined__(PETSC_ ## d) 219c7faf32eSJacob Faibussowitsch # define PetscDefined(d) PetscDefined_(d) 2204e1ad211SJed Brown #endif 2214e1ad211SJed Brown 222d382aafbSBarry Smith /* 223a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 224a7886beaSBarry Smith This usually happens because 225a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 226a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 227a7886beaSBarry Smith */ 228a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 229c9b973beSBarry Smith # if !defined(MPIUNI_H) 230a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 231a7886beaSBarry Smith # endif 23241f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 23341f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 23441f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 23541f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 23641f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 23741f4af4cSSatish Balay # endif 23841f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 23941f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 24041f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 24141f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 24241f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 24341f4af4cSSatish Balay # endif 244a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 24541f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 246a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 247ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 248a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 249a7886beaSBarry Smith # endif 250a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 251a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 252a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 253ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 254c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 255a7886beaSBarry Smith # endif 256d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 257d97fd468SStefano Zampini # if !defined(MSMPI_VER) 258d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 259d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 260d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 261d97fd468SStefano Zampini # endif 262d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 263d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 264a7886beaSBarry Smith #endif 265a7886beaSBarry Smith 266a7886beaSBarry Smith /* 2672981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 268d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 269d382aafbSBarry Smith */ 270d382aafbSBarry Smith #include <stdio.h> 271d382aafbSBarry Smith 272d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 273d382aafbSBarry Smith #if !defined(MPIAPI) 274d382aafbSBarry Smith #define MPIAPI 275d382aafbSBarry Smith #endif 276d382aafbSBarry Smith 2771cc8b206SBarry Smith /* 2781cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2791cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2801cc8b206SBarry Smith does not match the actual type of the argument being passed in 2811cc8b206SBarry Smith */ 282c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 283894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 284894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2858ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2868ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 287894dd566SJed Brown # endif 288894dd566SJed Brown #endif 289894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 290894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2918ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2928ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 293894dd566SJed Brown #endif 294b3506946SBarry Smith 2955a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 296df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 297e28ce29aSPatrick Sanan 298e28ce29aSPatrick Sanan /*MC 299e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 300e28ce29aSPatrick Sanan 301e28ce29aSPatrick Sanan Notes: 302e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 303e28ce29aSPatrick Sanan 304e28ce29aSPatrick Sanan Level: beginner 305e28ce29aSPatrick Sanan 306e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 307e28ce29aSPatrick Sanan M*/ 308e28ce29aSPatrick Sanan 30937354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 310bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 311a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 312fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 313bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 314a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 315f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 316bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 317a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 318236ed0a3SSatish Balay #else 319bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 320236ed0a3SSatish Balay #endif 321b7b8f77aSBarry Smith 3227cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 323b7b8f77aSBarry Smith 324d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 325bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 326a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 327d382aafbSBarry Smith #else 328d382aafbSBarry Smith # define MPIU_INT MPI_INT 329a05e1a72SSatish Balay # define PetscInt_FMT "d" 330d382aafbSBarry Smith #endif 331d382aafbSBarry Smith 332503cfb0cSBarry Smith /* 333503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 334503cfb0cSBarry Smith */ 335e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 336d382aafbSBarry Smith 337d382aafbSBarry Smith /* 338d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 339d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 340d382aafbSBarry Smith */ 341014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 342d382aafbSBarry Smith 343d382aafbSBarry Smith /* 344d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 345d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 346d382aafbSBarry Smith */ 347014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 348d382aafbSBarry Smith 349d382aafbSBarry Smith /*MC 350d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 351d382aafbSBarry Smith 352d382aafbSBarry Smith Synopsis: 353aaa7dc30SBarry Smith #include <petscsys.h> 354ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 355d382aafbSBarry Smith 356eca87e8dSBarry Smith Not Collective 357eca87e8dSBarry Smith 358d382aafbSBarry Smith Input Parameters: 359d382aafbSBarry Smith . cond - condition or expression 360d382aafbSBarry Smith 361e28ce29aSPatrick Sanan Notes: 362e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 363d382aafbSBarry Smith branch is unlikely. 364d382aafbSBarry Smith 365d382aafbSBarry Smith Level: advanced 366d382aafbSBarry Smith 367cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 368d382aafbSBarry Smith M*/ 369d382aafbSBarry Smith 370d382aafbSBarry Smith /*MC 371d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 372d382aafbSBarry Smith 373d382aafbSBarry Smith Synopsis: 374aaa7dc30SBarry Smith #include <petscsys.h> 37523072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 376d382aafbSBarry Smith 377eca87e8dSBarry Smith Not Collective 378eca87e8dSBarry Smith 379d382aafbSBarry Smith Input Parameters: 380d382aafbSBarry Smith . cond - condition or expression 381d382aafbSBarry Smith 382e28ce29aSPatrick Sanan Notes: 383e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 384d382aafbSBarry Smith branch is likely. 385d382aafbSBarry Smith 386d382aafbSBarry Smith Level: advanced 387d382aafbSBarry Smith 388d382aafbSBarry Smith .seealso: PetscUnlikely() 389d382aafbSBarry Smith M*/ 390d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 391d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 392d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 393d382aafbSBarry Smith #else 394cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 395cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 396d382aafbSBarry Smith #endif 397d382aafbSBarry Smith 398cf9c20a2SJed Brown /*MC 399cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 400cf9c20a2SJed Brown 401cf9c20a2SJed Brown Synopsis: 402cf9c20a2SJed Brown #include <petscsys.h> 403cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 404cf9c20a2SJed Brown 405cf9c20a2SJed Brown Not Collective 406cf9c20a2SJed Brown 407cf9c20a2SJed Brown Input Parameters: 408cf9c20a2SJed Brown . cond - condition or expression 409cf9c20a2SJed Brown 410cf9c20a2SJed Brown Notes: 411cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 412cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 413cf9c20a2SJed Brown 414cf9c20a2SJed Brown Level: advanced 415cf9c20a2SJed Brown 416cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 417cf9c20a2SJed Brown M*/ 418cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 419cf9c20a2SJed Brown 420c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 421c8b9133aSSatish Balay 4225c993f7fSStefano Zampini #if defined(__NEC__) 4235c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4245c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 425c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4261dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 427c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 428160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 429c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 430160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 431160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 432c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 433c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 434c8b9133aSSatish Balay #else 435c8b9133aSSatish Balay # define PetscPragmaSIMD 436c8b9133aSSatish Balay #endif 437c8b9133aSSatish Balay 438d382aafbSBarry Smith /* 439d382aafbSBarry Smith Declare extern C stuff after including external header files 440d382aafbSBarry Smith */ 441d382aafbSBarry Smith 4426a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 44370b3c8c7SBarry Smith 4446edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 4458b49ba18SBarry Smith /* 446390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4478b49ba18SBarry Smith */ 4488b49ba18SBarry Smith #include <petscmath.h> 4498b49ba18SBarry Smith 4506a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 451d382aafbSBarry Smith 452d382aafbSBarry Smith /*MC 4530298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 454d382aafbSBarry Smith 455d382aafbSBarry Smith Level: beginner 456d382aafbSBarry Smith 457e28ce29aSPatrick Sanan Note: 458e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 459d382aafbSBarry Smith some default 460d382aafbSBarry Smith 461e28ce29aSPatrick Sanan Fortran Notes: 462e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 463d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 464d382aafbSBarry Smith 465e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 466d382aafbSBarry Smith 467d382aafbSBarry Smith M*/ 4680298fd71SBarry Smith #define PETSC_IGNORE NULL 469d382aafbSBarry Smith 470c528d872SBarry Smith /* This is deprecated */ 471c528d872SBarry Smith #define PETSC_NULL NULL 472c528d872SBarry Smith 473d382aafbSBarry Smith /*MC 474557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 475557d4da8SBarry Smith where you wish PETSc to use the default. 476557d4da8SBarry Smith 477557d4da8SBarry Smith Level: beginner 478557d4da8SBarry Smith 479e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 480557d4da8SBarry Smith 481557d4da8SBarry Smith M*/ 482557d4da8SBarry Smith #define PETSC_DECIDE -1 483557d4da8SBarry Smith 484557d4da8SBarry Smith /*MC 485d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 486d382aafbSBarry Smith where you wish PETSc to compute the required value. 487d382aafbSBarry Smith 488d382aafbSBarry Smith Level: beginner 489d382aafbSBarry Smith 490e28ce29aSPatrick Sanan Developer Note: 491e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 492557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 493557d4da8SBarry Smith 4940298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 495d382aafbSBarry Smith 496d382aafbSBarry Smith M*/ 497d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 498d382aafbSBarry Smith 499d382aafbSBarry Smith /*MC 500557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 501557d4da8SBarry Smith where you wish PETSc to use the default. 502557d4da8SBarry Smith 503557d4da8SBarry Smith Level: beginner 504557d4da8SBarry Smith 505e28ce29aSPatrick Sanan Fortran Notes: 506e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 507557d4da8SBarry Smith 5080298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 509557d4da8SBarry Smith 510557d4da8SBarry Smith M*/ 511557d4da8SBarry Smith #define PETSC_DEFAULT -2 512557d4da8SBarry Smith 513557d4da8SBarry Smith /*MC 514d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 515ea8fe74dSBarry Smith all the processes that PETSc knows about. 516d382aafbSBarry Smith 517d382aafbSBarry Smith Level: beginner 518d382aafbSBarry Smith 519e28ce29aSPatrick Sanan Notes: 520e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 521d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 522d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 523a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 524a990b902SBarry Smith 525a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 526a990b902SBarry Smith is called because it may not have a valid value yet. 527d382aafbSBarry Smith 528d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 529d382aafbSBarry Smith 530d382aafbSBarry Smith M*/ 531014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 532d382aafbSBarry Smith 533d382aafbSBarry Smith /*MC 534503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 535d382aafbSBarry Smith 536d382aafbSBarry Smith Level: beginner 537d382aafbSBarry Smith 538e28ce29aSPatrick Sanan Notes: 539e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 540a990b902SBarry Smith 541d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 542d382aafbSBarry Smith 543d382aafbSBarry Smith M*/ 544d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 545d382aafbSBarry Smith 5466de5d289SStefano Zampini /*MC 5476de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5486de5d289SStefano Zampini MPI with MPI_Init_thread. 5496de5d289SStefano Zampini 5506de5d289SStefano Zampini Level: beginner 5516de5d289SStefano Zampini 5526de5d289SStefano Zampini Notes: 5536de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5546de5d289SStefano Zampini 5556de5d289SStefano Zampini .seealso: PetscInitialize() 5566de5d289SStefano Zampini 5576de5d289SStefano Zampini M*/ 5586de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5596de5d289SStefano Zampini 560d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5618ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 562014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 563014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5644cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 565d382aafbSBarry Smith 566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 569d382aafbSBarry Smith 57059e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 57159e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 57259e55d94SJunchao Zhang #endif 57359e55d94SJunchao Zhang 57471438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 57571438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 57671438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 57771438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 57871438e86SJunchao Zhang #endif 57971438e86SJunchao Zhang 580540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 581540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 582540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 583540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 584540e20f2SPierre Jolivet #endif 585540e20f2SPierre Jolivet 586d382aafbSBarry Smith /*MC 58795dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 588d382aafbSBarry Smith 589eca87e8dSBarry Smith Synopsis: 590aaa7dc30SBarry Smith #include <petscsys.h> 591eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 592eca87e8dSBarry Smith 593eca87e8dSBarry Smith Not Collective 594eca87e8dSBarry Smith 595d382aafbSBarry Smith Input Parameter: 596d382aafbSBarry Smith . m - number of bytes to allocate 597d382aafbSBarry Smith 598d382aafbSBarry Smith Output Parameter: 599d382aafbSBarry Smith . result - memory allocated 600d382aafbSBarry Smith 601d382aafbSBarry Smith Level: beginner 602d382aafbSBarry Smith 60349d7da52SJed Brown Notes: 60449d7da52SJed Brown Memory is always allocated at least double aligned 605d382aafbSBarry Smith 60649d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 607d382aafbSBarry Smith 608d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 609d382aafbSBarry Smith 610d382aafbSBarry Smith M*/ 611071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 612d382aafbSBarry Smith 613d382aafbSBarry Smith /*MC 6143221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6153221ece2SMatthew G. Knepley 6163221ece2SMatthew G. Knepley Synopsis: 6173221ece2SMatthew G. Knepley #include <petscsys.h> 6183221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6193221ece2SMatthew G. Knepley 6203221ece2SMatthew G. Knepley Not Collective 6213221ece2SMatthew G. Knepley 6223221ece2SMatthew G. Knepley Input Parameters: 6233221ece2SMatthew G. Knepley + m - number of bytes to allocate 62492f119d6SBarry Smith - result - previous memory 6253221ece2SMatthew G. Knepley 6263221ece2SMatthew G. Knepley Output Parameter: 6273221ece2SMatthew G. Knepley . result - new memory allocated 6283221ece2SMatthew G. Knepley 6293221ece2SMatthew G. Knepley Level: developer 6303221ece2SMatthew G. Knepley 6313221ece2SMatthew G. Knepley Notes: 6323221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6333221ece2SMatthew G. Knepley 6343221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6353221ece2SMatthew G. Knepley 6363221ece2SMatthew G. Knepley M*/ 6373221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6383221ece2SMatthew G. Knepley 6393221ece2SMatthew G. Knepley /*MC 640503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 641d382aafbSBarry Smith 642d382aafbSBarry Smith Synopsis: 643aaa7dc30SBarry Smith #include <petscsys.h> 644d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 645d382aafbSBarry Smith 646eca87e8dSBarry Smith Not Collective 647eca87e8dSBarry Smith 648eca87e8dSBarry Smith Input Parameters: 649eca87e8dSBarry Smith . addr - address to align (any pointer type) 650eca87e8dSBarry Smith 651d382aafbSBarry Smith Level: developer 652d382aafbSBarry Smith 653d382aafbSBarry Smith .seealso: PetscMallocAlign() 654d382aafbSBarry Smith 655d382aafbSBarry Smith M*/ 656d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 657d382aafbSBarry Smith 658d382aafbSBarry Smith /*MC 6598f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6608f51dc47SJunchao Zhang 6618f51dc47SJunchao Zhang Synopsis: 6628f51dc47SJunchao Zhang #include <petscsys.h> 6638f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6648f51dc47SJunchao Zhang 6658f51dc47SJunchao Zhang Not Collective 6668f51dc47SJunchao Zhang 6678f51dc47SJunchao Zhang Input Parameter: 6688f51dc47SJunchao Zhang . m - number of bytes to allocate 6698f51dc47SJunchao Zhang 6708f51dc47SJunchao Zhang Output Parameter: 6718f51dc47SJunchao Zhang . result - memory allocated 6728f51dc47SJunchao Zhang 6738f51dc47SJunchao Zhang Level: beginner 6748f51dc47SJunchao Zhang 6758f51dc47SJunchao Zhang Notes: 6768f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6778f51dc47SJunchao Zhang 6788f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6798f51dc47SJunchao Zhang 6808f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6818f51dc47SJunchao Zhang 6828f51dc47SJunchao Zhang M*/ 6838f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6848f51dc47SJunchao Zhang 6858f51dc47SJunchao Zhang /*MC 686785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 687d382aafbSBarry Smith 688eca87e8dSBarry Smith Synopsis: 689aaa7dc30SBarry Smith #include <petscsys.h> 690785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 691785e854fSJed Brown 692785e854fSJed Brown Not Collective 693785e854fSJed Brown 694785e854fSJed Brown Input Parameter: 695390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 696785e854fSJed Brown 697785e854fSJed Brown Output Parameter: 6981fe1b817SJunchao Zhang . r1 - memory allocated 699785e854fSJed Brown 700e28ce29aSPatrick Sanan Note: 701e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 702390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 703390e1bf2SBarry Smith $ PetscInt *id; 704390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 705390e1bf2SBarry Smith not 706390e1bf2SBarry Smith $ PetscInt *id; 707390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 708390e1bf2SBarry Smith 7091fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 710390e1bf2SBarry Smith 711390e1bf2SBarry Smith Level: beginner 712785e854fSJed Brown 7131795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 714785e854fSJed Brown 715785e854fSJed Brown M*/ 7162553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 717785e854fSJed Brown 718785e854fSJed Brown /*MC 7191795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7201795a4d1SJed Brown 7211795a4d1SJed Brown Synopsis: 722aaa7dc30SBarry Smith #include <petscsys.h> 7231795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7241795a4d1SJed Brown 7251795a4d1SJed Brown Not Collective 7261795a4d1SJed Brown 7271795a4d1SJed Brown Input Parameter: 7281795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7291795a4d1SJed Brown 7301795a4d1SJed Brown Output Parameter: 7311fe1b817SJunchao Zhang . r1 - memory allocated 7321795a4d1SJed Brown 733e28ce29aSPatrick Sanan Notes: 734e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 735390e1bf2SBarry Smith 736390e1bf2SBarry Smith Level: beginner 7371795a4d1SJed Brown 7381795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7391795a4d1SJed Brown 7401795a4d1SJed Brown M*/ 7412553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7421795a4d1SJed Brown 7431795a4d1SJed Brown /*MC 744dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 745d382aafbSBarry Smith 746eca87e8dSBarry Smith Synopsis: 747aaa7dc30SBarry Smith #include <petscsys.h> 748dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 749eca87e8dSBarry Smith 750eca87e8dSBarry Smith Not Collective 751eca87e8dSBarry Smith 752d8d19677SJose E. Roman Input Parameters: 753d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 754dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 755d382aafbSBarry Smith 756d8d19677SJose E. Roman Output Parameters: 757d382aafbSBarry Smith + r1 - memory allocated in first chunk 758d382aafbSBarry Smith - r2 - memory allocated in second chunk 759d382aafbSBarry Smith 760d382aafbSBarry Smith Level: developer 761d382aafbSBarry Smith 7621795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 763d382aafbSBarry Smith 764d382aafbSBarry Smith M*/ 7652553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 766d382aafbSBarry Smith 767d382aafbSBarry Smith /*MC 7681795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 769d382aafbSBarry Smith 770eca87e8dSBarry Smith Synopsis: 771aaa7dc30SBarry Smith #include <petscsys.h> 7721795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 773eca87e8dSBarry Smith 774eca87e8dSBarry Smith Not Collective 775eca87e8dSBarry Smith 776d8d19677SJose E. Roman Input Parameters: 777d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7781795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7791795a4d1SJed Brown 780d8d19677SJose E. Roman Output Parameters: 7811795a4d1SJed Brown + r1 - memory allocated in first chunk 7821795a4d1SJed Brown - r2 - memory allocated in second chunk 7831795a4d1SJed Brown 7841795a4d1SJed Brown Level: developer 7851795a4d1SJed Brown 7861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7871795a4d1SJed Brown 7881795a4d1SJed Brown M*/ 7892553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7901795a4d1SJed Brown 7911795a4d1SJed Brown /*MC 792dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 793d382aafbSBarry Smith 794d382aafbSBarry Smith Synopsis: 795aaa7dc30SBarry Smith #include <petscsys.h> 796dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 797d382aafbSBarry Smith 798d382aafbSBarry Smith Not Collective 799d382aafbSBarry Smith 800d8d19677SJose E. Roman Input Parameters: 801d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 802d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 803dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 804d382aafbSBarry Smith 805d8d19677SJose E. Roman Output Parameters: 806d382aafbSBarry Smith + r1 - memory allocated in first chunk 807d382aafbSBarry Smith . r2 - memory allocated in second chunk 808d382aafbSBarry Smith - r3 - memory allocated in third chunk 809d382aafbSBarry Smith 810d382aafbSBarry Smith Level: developer 811d382aafbSBarry Smith 8121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 813d382aafbSBarry Smith 814d382aafbSBarry Smith M*/ 8152553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 816d382aafbSBarry Smith 817d382aafbSBarry Smith /*MC 8181795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 819d382aafbSBarry Smith 820eca87e8dSBarry Smith Synopsis: 821aaa7dc30SBarry Smith #include <petscsys.h> 8221795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 823eca87e8dSBarry Smith 824eca87e8dSBarry Smith Not Collective 825eca87e8dSBarry Smith 826d8d19677SJose E. Roman Input Parameters: 827d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 828d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8291795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8301795a4d1SJed Brown 831d8d19677SJose E. Roman Output Parameters: 8321795a4d1SJed Brown + r1 - memory allocated in first chunk 8331795a4d1SJed Brown . r2 - memory allocated in second chunk 8341795a4d1SJed Brown - r3 - memory allocated in third chunk 8351795a4d1SJed Brown 8361795a4d1SJed Brown Level: developer 8371795a4d1SJed Brown 8381795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8391795a4d1SJed Brown 8401795a4d1SJed Brown M*/ 8412553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8421795a4d1SJed Brown 8431795a4d1SJed Brown /*MC 844dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 845d382aafbSBarry Smith 846d382aafbSBarry Smith Synopsis: 847aaa7dc30SBarry Smith #include <petscsys.h> 848dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 849d382aafbSBarry Smith 850d382aafbSBarry Smith Not Collective 851d382aafbSBarry Smith 852d8d19677SJose E. Roman Input Parameters: 853d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 854d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 855d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 856dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 857d382aafbSBarry Smith 858d8d19677SJose E. Roman Output Parameters: 859d382aafbSBarry Smith + r1 - memory allocated in first chunk 860d382aafbSBarry Smith . r2 - memory allocated in second chunk 861d382aafbSBarry Smith . r3 - memory allocated in third chunk 862d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 863d382aafbSBarry Smith 864d382aafbSBarry Smith Level: developer 865d382aafbSBarry Smith 8661795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 867d382aafbSBarry Smith 868d382aafbSBarry Smith M*/ 8692553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 870d382aafbSBarry Smith 871d382aafbSBarry Smith /*MC 8721795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 873d382aafbSBarry Smith 874eca87e8dSBarry Smith Synopsis: 875aaa7dc30SBarry Smith #include <petscsys.h> 8761795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 877eca87e8dSBarry Smith 878eca87e8dSBarry Smith Not Collective 879eca87e8dSBarry Smith 880e28ce29aSPatrick Sanan Input Parameters: 881d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 882d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 883d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8841795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8851795a4d1SJed Brown 886e28ce29aSPatrick Sanan Output Parameters: 8871795a4d1SJed Brown + r1 - memory allocated in first chunk 8881795a4d1SJed Brown . r2 - memory allocated in second chunk 8891795a4d1SJed Brown . r3 - memory allocated in third chunk 8901795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8911795a4d1SJed Brown 8921795a4d1SJed Brown Level: developer 8931795a4d1SJed Brown 8941795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8951795a4d1SJed Brown 8961795a4d1SJed Brown M*/ 8972553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8981795a4d1SJed Brown 8991795a4d1SJed Brown /*MC 900dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 901d382aafbSBarry Smith 902d382aafbSBarry Smith Synopsis: 903aaa7dc30SBarry Smith #include <petscsys.h> 904dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 905d382aafbSBarry Smith 906d382aafbSBarry Smith Not Collective 907d382aafbSBarry Smith 908e28ce29aSPatrick Sanan Input Parameters: 909d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 910d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 911d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 912d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 913dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 914d382aafbSBarry Smith 915e28ce29aSPatrick Sanan Output Parameters: 916d382aafbSBarry Smith + r1 - memory allocated in first chunk 917d382aafbSBarry Smith . r2 - memory allocated in second chunk 918d382aafbSBarry Smith . r3 - memory allocated in third chunk 919d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 920d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 921d382aafbSBarry Smith 922d382aafbSBarry Smith Level: developer 923d382aafbSBarry Smith 9241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 925d382aafbSBarry Smith 926d382aafbSBarry Smith M*/ 9272553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 928d382aafbSBarry Smith 929d382aafbSBarry Smith /*MC 9301795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 931d382aafbSBarry Smith 932eca87e8dSBarry Smith Synopsis: 933aaa7dc30SBarry Smith #include <petscsys.h> 9341795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 935eca87e8dSBarry Smith 936eca87e8dSBarry Smith Not Collective 937eca87e8dSBarry Smith 938e28ce29aSPatrick Sanan Input Parameters: 939d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 940d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 941d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 942d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9431795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9441795a4d1SJed Brown 945e28ce29aSPatrick Sanan Output Parameters: 9461795a4d1SJed Brown + r1 - memory allocated in first chunk 9471795a4d1SJed Brown . r2 - memory allocated in second chunk 9481795a4d1SJed Brown . r3 - memory allocated in third chunk 9491795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9501795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9511795a4d1SJed Brown 9521795a4d1SJed Brown Level: developer 9531795a4d1SJed Brown 9541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9551795a4d1SJed Brown 9561795a4d1SJed Brown M*/ 9572553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 958d382aafbSBarry Smith 959d382aafbSBarry Smith /*MC 960dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 961d382aafbSBarry Smith 962d382aafbSBarry Smith Synopsis: 963aaa7dc30SBarry Smith #include <petscsys.h> 964dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 965d382aafbSBarry Smith 966d382aafbSBarry Smith Not Collective 967d382aafbSBarry Smith 968e28ce29aSPatrick Sanan Input Parameters: 969d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 970d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 971d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 972d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 973d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 974dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 975d382aafbSBarry Smith 976e28ce29aSPatrick Sanan Output Parameteasr: 977d382aafbSBarry Smith + r1 - memory allocated in first chunk 978d382aafbSBarry Smith . r2 - memory allocated in second chunk 979d382aafbSBarry Smith . r3 - memory allocated in third chunk 980d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 981d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 982d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 983d382aafbSBarry Smith 984d382aafbSBarry Smith Level: developer 985d382aafbSBarry Smith 9861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 987d382aafbSBarry Smith 988d382aafbSBarry Smith M*/ 9892553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 9921795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 993d382aafbSBarry Smith 994eca87e8dSBarry Smith Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 9961795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 997eca87e8dSBarry Smith 998eca87e8dSBarry Smith Not Collective 999eca87e8dSBarry Smith 1000e28ce29aSPatrick Sanan Input Parameters: 1001d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1002d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1003d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1004d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1005d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10061795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10071795a4d1SJed Brown 1008e28ce29aSPatrick Sanan Output Parameters: 10091795a4d1SJed Brown + r1 - memory allocated in first chunk 10101795a4d1SJed Brown . r2 - memory allocated in second chunk 10111795a4d1SJed Brown . r3 - memory allocated in third chunk 10121795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10131795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10141795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10151795a4d1SJed Brown 10161795a4d1SJed Brown Level: developer 10171795a4d1SJed Brown 10181795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10191795a4d1SJed Brown 10201795a4d1SJed Brown M*/ 10212553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10221795a4d1SJed Brown 10231795a4d1SJed Brown /*MC 1024dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1025d382aafbSBarry Smith 1026d382aafbSBarry Smith Synopsis: 1027aaa7dc30SBarry Smith #include <petscsys.h> 1028dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1029d382aafbSBarry Smith 1030d382aafbSBarry Smith Not Collective 1031d382aafbSBarry Smith 1032e28ce29aSPatrick Sanan Input Parameters: 1033d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1034d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1035d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1036d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1037d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1038d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1039dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1040d382aafbSBarry Smith 1041e28ce29aSPatrick Sanan Output Parameters: 1042d382aafbSBarry Smith + r1 - memory allocated in first chunk 1043d382aafbSBarry Smith . r2 - memory allocated in second chunk 1044d382aafbSBarry Smith . r3 - memory allocated in third chunk 1045d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1046d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1047d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1048eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1049d382aafbSBarry Smith 1050d382aafbSBarry Smith Level: developer 1051d382aafbSBarry Smith 10521795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1053d382aafbSBarry Smith 1054d382aafbSBarry Smith M*/ 10552553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1056d382aafbSBarry Smith 1057d382aafbSBarry Smith /*MC 10581795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10591795a4d1SJed Brown 10601795a4d1SJed Brown Synopsis: 1061aaa7dc30SBarry Smith #include <petscsys.h> 10621795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10631795a4d1SJed Brown 10641795a4d1SJed Brown Not Collective 10651795a4d1SJed Brown 1066e28ce29aSPatrick Sanan Input Parameters: 10671795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10681795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10691795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10701795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10711795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10721795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10731795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10741795a4d1SJed Brown 1075e28ce29aSPatrick Sanan Output Parameters: 10761795a4d1SJed Brown + r1 - memory allocated in first chunk 10771795a4d1SJed Brown . r2 - memory allocated in second chunk 10781795a4d1SJed Brown . r3 - memory allocated in third chunk 10791795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10801795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10811795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10821795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10831795a4d1SJed Brown 10841795a4d1SJed Brown Level: developer 10851795a4d1SJed Brown 10861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10871795a4d1SJed Brown 10881795a4d1SJed Brown M*/ 10892553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10901795a4d1SJed Brown 10911795a4d1SJed Brown /*MC 1092503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1093d382aafbSBarry Smith 1094eca87e8dSBarry Smith Synopsis: 1095aaa7dc30SBarry Smith #include <petscsys.h> 1096b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1097eca87e8dSBarry Smith 1098eca87e8dSBarry Smith Not Collective 1099eca87e8dSBarry Smith 1100d382aafbSBarry Smith Output Parameter: 1101b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1102d382aafbSBarry Smith 1103d382aafbSBarry Smith Level: beginner 1104d382aafbSBarry Smith 1105390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1106d382aafbSBarry Smith 1107d382aafbSBarry Smith M*/ 1108b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1109ad0619ddSBarry Smith 1110ad0619ddSBarry Smith /*MC 1111b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1112ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1113ad0619ddSBarry Smith 1114ad0619ddSBarry Smith Synopsis: 1115aaa7dc30SBarry Smith #include <petscsys.h> 1116b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1117ad0619ddSBarry Smith 1118ad0619ddSBarry Smith Not Collective 1119ad0619ddSBarry Smith 1120ad0619ddSBarry Smith Input Parameter: 1121b00a9115SJed Brown . obj - object memory is logged to 1122ad0619ddSBarry Smith 1123ad0619ddSBarry Smith Output Parameter: 1124b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1125ad0619ddSBarry Smith 1126ad0619ddSBarry Smith Level: developer 1127ad0619ddSBarry Smith 1128390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1129ad0619ddSBarry Smith 1130ad0619ddSBarry Smith M*/ 1131d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /*MC 1134d382aafbSBarry Smith PetscFree - Frees memory 1135d382aafbSBarry Smith 1136eca87e8dSBarry Smith Synopsis: 1137aaa7dc30SBarry Smith #include <petscsys.h> 1138eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1139eca87e8dSBarry Smith 1140eca87e8dSBarry Smith Not Collective 1141eca87e8dSBarry Smith 1142d382aafbSBarry Smith Input Parameter: 11437f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1144d382aafbSBarry Smith 1145d382aafbSBarry Smith Level: beginner 1146d382aafbSBarry Smith 114749d7da52SJed Brown Notes: 1148390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1149390e1bf2SBarry Smith 115049d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1151d382aafbSBarry Smith 1152390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1153d382aafbSBarry Smith 1154d382aafbSBarry Smith M*/ 1155ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1156d382aafbSBarry Smith 1157d382aafbSBarry Smith /*MC 1158d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1159d382aafbSBarry Smith 1160eca87e8dSBarry Smith Synopsis: 1161aaa7dc30SBarry Smith #include <petscsys.h> 1162eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1163eca87e8dSBarry Smith 1164eca87e8dSBarry Smith Not Collective 1165eca87e8dSBarry Smith 1166e28ce29aSPatrick Sanan Input Parameters: 1167d382aafbSBarry Smith + memory1 - memory to free 1168d382aafbSBarry Smith - memory2 - 2nd memory to free 1169d382aafbSBarry Smith 1170d382aafbSBarry Smith Level: developer 1171d382aafbSBarry Smith 117295452b02SPatrick Sanan Notes: 117395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith M*/ 1178ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1179d382aafbSBarry Smith 1180d382aafbSBarry Smith /*MC 1181d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1182d382aafbSBarry Smith 1183eca87e8dSBarry Smith Synopsis: 1184aaa7dc30SBarry Smith #include <petscsys.h> 1185eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1186eca87e8dSBarry Smith 1187eca87e8dSBarry Smith Not Collective 1188eca87e8dSBarry Smith 1189e28ce29aSPatrick Sanan Input Parameters: 1190d382aafbSBarry Smith + memory1 - memory to free 1191d382aafbSBarry Smith . memory2 - 2nd memory to free 1192d382aafbSBarry Smith - memory3 - 3rd memory to free 1193d382aafbSBarry Smith 1194d382aafbSBarry Smith Level: developer 1195d382aafbSBarry Smith 119695452b02SPatrick Sanan Notes: 119795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1198d382aafbSBarry Smith 1199d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith M*/ 1202ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith /*MC 1205d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1206d382aafbSBarry Smith 1207eca87e8dSBarry Smith Synopsis: 1208aaa7dc30SBarry Smith #include <petscsys.h> 1209eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1210eca87e8dSBarry Smith 1211eca87e8dSBarry Smith Not Collective 1212eca87e8dSBarry Smith 1213e28ce29aSPatrick Sanan Input Parameters: 1214d382aafbSBarry Smith + m1 - memory to free 1215d382aafbSBarry Smith . m2 - 2nd memory to free 1216d382aafbSBarry Smith . m3 - 3rd memory to free 1217d382aafbSBarry Smith - m4 - 4th memory to free 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith Level: developer 1220d382aafbSBarry Smith 122195452b02SPatrick Sanan Notes: 122295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith M*/ 1227ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith /*MC 1230d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1231d382aafbSBarry Smith 1232eca87e8dSBarry Smith Synopsis: 1233aaa7dc30SBarry Smith #include <petscsys.h> 1234eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1235eca87e8dSBarry Smith 1236eca87e8dSBarry Smith Not Collective 1237eca87e8dSBarry Smith 1238e28ce29aSPatrick Sanan Input Parameters: 1239d382aafbSBarry Smith + m1 - memory to free 1240d382aafbSBarry Smith . m2 - 2nd memory to free 1241d382aafbSBarry Smith . m3 - 3rd memory to free 1242d382aafbSBarry Smith . m4 - 4th memory to free 1243d382aafbSBarry Smith - m5 - 5th memory to free 1244d382aafbSBarry Smith 1245d382aafbSBarry Smith Level: developer 1246d382aafbSBarry Smith 124795452b02SPatrick Sanan Notes: 124895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1249d382aafbSBarry Smith 1250d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith M*/ 1253ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1254d382aafbSBarry Smith 1255d382aafbSBarry Smith /*MC 1256d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1257d382aafbSBarry Smith 1258eca87e8dSBarry Smith Synopsis: 1259aaa7dc30SBarry Smith #include <petscsys.h> 1260eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1261eca87e8dSBarry Smith 1262eca87e8dSBarry Smith Not Collective 1263eca87e8dSBarry Smith 1264e28ce29aSPatrick Sanan Input Parameters: 1265d382aafbSBarry Smith + m1 - memory to free 1266d382aafbSBarry Smith . m2 - 2nd memory to free 1267d382aafbSBarry Smith . m3 - 3rd memory to free 1268d382aafbSBarry Smith . m4 - 4th memory to free 1269d382aafbSBarry Smith . m5 - 5th memory to free 1270d382aafbSBarry Smith - m6 - 6th memory to free 1271d382aafbSBarry Smith 1272d382aafbSBarry Smith Level: developer 1273d382aafbSBarry Smith 127495452b02SPatrick Sanan Notes: 127595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1276d382aafbSBarry Smith 1277d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1278d382aafbSBarry Smith 1279d382aafbSBarry Smith M*/ 1280ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1281d382aafbSBarry Smith 1282d382aafbSBarry Smith /*MC 1283d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1284d382aafbSBarry Smith 1285eca87e8dSBarry Smith Synopsis: 1286aaa7dc30SBarry Smith #include <petscsys.h> 1287eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1288eca87e8dSBarry Smith 1289eca87e8dSBarry Smith Not Collective 1290eca87e8dSBarry Smith 1291e28ce29aSPatrick Sanan Input Parameters: 1292d382aafbSBarry Smith + m1 - memory to free 1293d382aafbSBarry Smith . m2 - 2nd memory to free 1294d382aafbSBarry Smith . m3 - 3rd memory to free 1295d382aafbSBarry Smith . m4 - 4th memory to free 1296d382aafbSBarry Smith . m5 - 5th memory to free 1297d382aafbSBarry Smith . m6 - 6th memory to free 1298d382aafbSBarry Smith - m7 - 7th memory to free 1299d382aafbSBarry Smith 1300d382aafbSBarry Smith Level: developer 1301d382aafbSBarry Smith 130295452b02SPatrick Sanan Notes: 130395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1304d382aafbSBarry Smith 1305d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1306d382aafbSBarry Smith PetscMalloc7() 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith M*/ 1309ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1310d382aafbSBarry Smith 1311ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1312ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1313071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1314efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13153221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1316ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 131792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1319d382aafbSBarry Smith 1320d382aafbSBarry Smith /* 1321c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1322c1706be6SHong Zhang */ 1323c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1324c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 132531f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 132631f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 132731f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 132831f06eaaSHong Zhang #endif 132959af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 133059af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 133159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 133259af0bd3SScott Kruger #endif 133359af0bd3SScott Kruger 1334a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 133536763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1336a5057860SBarry Smith 1337a5057860SBarry Smith /* 133866d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1339d382aafbSBarry Smith */ 1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 134192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1344e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1345e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 134692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 134792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1348efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 134992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 135092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1351608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1352608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1353d382aafbSBarry Smith 13546a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13588e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1359d382aafbSBarry Smith 1360d382aafbSBarry Smith /* 1361d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1362d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1363d382aafbSBarry Smith functionality and/or error checking. 1364d382aafbSBarry Smith */ 1365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1367d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1375a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13792f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13842c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 138747340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13886fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13896991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13906991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1392d382aafbSBarry Smith 1393573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1394573b0fb4SBarry Smith 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1398d382aafbSBarry Smith 1399e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1400a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1401a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1402a53986e1SJed Brown 1403d382aafbSBarry Smith /* 1404d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1405d382aafbSBarry Smith */ 1406367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1407570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1408de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1409014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1410014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1411d9822059SBarry Smith #else 1412de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1413d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1414d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1415d9822059SBarry Smith #endif 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1417d382aafbSBarry Smith 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1420eb3f98d2SBarry Smith 142195c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1422d6a4318aSJed Brown 1423639ff905SBarry Smith /* 1424639ff905SBarry Smith Defines PETSc error handling. 1425639ff905SBarry Smith */ 1426639ff905SBarry Smith #include <petscerror.h> 1427d382aafbSBarry Smith 14280700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1429014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1430014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 143281256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 143381256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 143481256985SMatthew G. Knepley 1435d382aafbSBarry Smith /* 1436d382aafbSBarry Smith Routines that get memory usage information from the OS 1437d382aafbSBarry Smith */ 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1441b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1442d382aafbSBarry Smith 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1444d382aafbSBarry Smith 1445d382aafbSBarry Smith /* 1446d382aafbSBarry Smith Initialization of PETSc 1447d382aafbSBarry Smith */ 1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1458d382aafbSBarry Smith 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1460607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1461d382aafbSBarry Smith 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1466d382aafbSBarry Smith 1467a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1468a50e088cSMatthew G. Knepley 1469d382aafbSBarry Smith /* 1470d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14712981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1472d382aafbSBarry Smith */ 1473638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1474638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1475638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1476d382aafbSBarry Smith 1477d382aafbSBarry Smith /* 1478d382aafbSBarry Smith Functions that can act on any PETSc object. 1479d382aafbSBarry Smith */ 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1498bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1499bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15020eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15030eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1505d382aafbSBarry Smith 1506665c2dedSJed Brown #include <petscviewertypes.h> 1507639ff905SBarry Smith #include <petscoptions.h> 1508639ff905SBarry Smith 1509608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1510608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1511608c71bfSMatthew G. Knepley 15120633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15130633abcbSJed Brown 1514c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1515dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1516639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15170005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15180005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1526685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15294099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1531b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1534d382aafbSBarry Smith 1535e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15367aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1537e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1538e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1539e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1540e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1541e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1542e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1543e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1544e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1545e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 154615681b3cSBarry Smith 1547ec7429eaSBarry Smith #else 15487aab2a10SBarry Smith #define PetscSAWsBlock() 0 1549e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1550e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1551e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1552e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1553e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1554e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1555e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1556e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1557e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 155815681b3cSBarry Smith 1559ec7429eaSBarry Smith #endif 1560b90c6cbeSBarry Smith 156182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 156282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 156382b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1564258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1565258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1566258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1567258ec3d2SMatthew G. Knepley #endif 15687d5d4d99SBarry Smith 15695fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1570a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15715fe58b6fSBarry Smith #endif 15727eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1573a64a8e02SBarry Smith 1574140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1575140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1576140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1577140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1578140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1579140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1580d382aafbSBarry Smith 1581d382aafbSBarry Smith /* 1582503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1583d382aafbSBarry Smith link libraries that will be loaded as needed. 1584d382aafbSBarry Smith */ 1585a240a19fSJed Brown 1586a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1587a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1588140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15891c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15901c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 159144ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1592140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1593140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1594140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1595d382aafbSBarry Smith 1596014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1604d382aafbSBarry Smith 1605d382aafbSBarry Smith /* 1606d382aafbSBarry Smith Useful utility routines 1607d382aafbSBarry Smith */ 1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1610d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1615dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1616dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1617d382aafbSBarry Smith 161864ac3b0dSPatrick Sanan /*MC 1619ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1620503cfb0cSBarry Smith 1621e28ce29aSPatrick Sanan Notes: 1622e28ce29aSPatrick Sanan This is useful in cases like 1623503cfb0cSBarry Smith $ int *a; 1624ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16251cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 162664ac3b0dSPatrick Sanan 162764ac3b0dSPatrick Sanan Level: beginner 162864ac3b0dSPatrick Sanan 162964ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 163064ac3b0dSPatrick Sanan M*/ 1631d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1632503cfb0cSBarry Smith 1633d382aafbSBarry Smith /*MC 1634d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1635d382aafbSBarry Smith 1636d382aafbSBarry Smith Synopsis: 1637aaa7dc30SBarry Smith #include <petscsys.h> 1638659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1639d382aafbSBarry Smith 1640659f7ba0SBarry Smith Collective on comm 1641eca87e8dSBarry Smith 1642d382aafbSBarry Smith Input Parameters: 1643659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1644d382aafbSBarry Smith . format - the usual printf() format string 1645659f7ba0SBarry Smith - args - arguments to be printed 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith Level: developer 1648d382aafbSBarry Smith 1649d382aafbSBarry Smith Fortran Note: 1650d382aafbSBarry Smith This routine is not supported in Fortran. 1651d382aafbSBarry Smith 1652659f7ba0SBarry Smith Note: 1653659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1654659f7ba0SBarry Smith 1655659f7ba0SBarry Smith To use, write your own function, for example, 1656659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1657659f7ba0SBarry Smith ${ 1658659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1659659f7ba0SBarry Smith $} 1660659f7ba0SBarry Smith then do the assigment 1661659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1662659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1663659f7ba0SBarry Smith 1664659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1665d382aafbSBarry Smith 1666d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1667d382aafbSBarry Smith M*/ 1668014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1669d382aafbSBarry Smith 1670fcfd50ebSBarry Smith /* 1671fcfd50ebSBarry Smith Defines PETSc profiling. 1672fcfd50ebSBarry Smith */ 16732c8e378dSBarry Smith #include <petsclog.h> 1674fcfd50ebSBarry Smith 1675fcfd50ebSBarry Smith /* 1676fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1677fcfd50ebSBarry Smith */ 1678014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16851b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1686fcfd50ebSBarry Smith 1687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1690d382aafbSBarry Smith 1691d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1692d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1693d781fa04SBarry Smith 1694d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1695014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1696016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 169774ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1698d382aafbSBarry Smith #endif 1699d382aafbSBarry Smith 1700014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1701014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17020ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1703014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1705014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1707d382aafbSBarry Smith 1708014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1709014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1710014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1711014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1714b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1715d382aafbSBarry Smith 1716d382aafbSBarry Smith /* 1717d382aafbSBarry Smith For use in debuggers 1718d382aafbSBarry Smith */ 1719014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1720014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1721014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1722014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1723014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1724d382aafbSBarry Smith 1725a663daf8SBarry Smith #include <stddef.h> 1726a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1727d382aafbSBarry Smith #include <stdlib.h> 17286c7e564aSBarry Smith 17294a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1730d382aafbSBarry Smith #include <xmmintrin.h> 1731d382aafbSBarry Smith #endif 1732d382aafbSBarry Smith 1733d382aafbSBarry Smith /*@C 1734580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1735580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1736580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1737580bdb30SBarry Smith 1738580bdb30SBarry Smith Not Collective 1739580bdb30SBarry Smith 1740580bdb30SBarry Smith Input Parameters: 1741580bdb30SBarry Smith + b - pointer to initial memory space 1742580bdb30SBarry Smith . a - pointer to copy space 1743580bdb30SBarry Smith - n - length (in bytes) of space to copy 1744580bdb30SBarry Smith 1745580bdb30SBarry Smith Level: intermediate 1746580bdb30SBarry Smith 1747580bdb30SBarry Smith Note: 1748857a15f1SBarry Smith PetscArraymove() is preferred 1749580bdb30SBarry Smith This routine is analogous to memmove(). 1750580bdb30SBarry Smith 1751580bdb30SBarry Smith Developers Note: This is inlined for performance 1752580bdb30SBarry Smith 1753580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1754580bdb30SBarry Smith PetscArraymove() 1755580bdb30SBarry Smith @*/ 1756580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1757580bdb30SBarry Smith { 1758580bdb30SBarry Smith PetscFunctionBegin; 1759580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1760580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1761580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1762580bdb30SBarry Smith if (a < b) { 1763580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1764580bdb30SBarry Smith else { 1765580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1766580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1767580bdb30SBarry Smith } 1768580bdb30SBarry Smith } else { 1769580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1770580bdb30SBarry Smith else { 1771580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1772580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1773580bdb30SBarry Smith } 1774580bdb30SBarry Smith } 1775580bdb30SBarry Smith #else 1776580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1777580bdb30SBarry Smith #endif 1778580bdb30SBarry Smith PetscFunctionReturn(0); 1779580bdb30SBarry Smith } 1780580bdb30SBarry Smith 1781d382aafbSBarry Smith /*@C 1782d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1783d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1784d382aafbSBarry Smith PetscMemmove() in that case. 1785d382aafbSBarry Smith 1786d382aafbSBarry Smith Not Collective 1787d382aafbSBarry Smith 1788d382aafbSBarry Smith Input Parameters: 1789d382aafbSBarry Smith + b - pointer to initial memory space 1790d382aafbSBarry Smith - n - length (in bytes) of space to copy 1791d382aafbSBarry Smith 1792d382aafbSBarry Smith Output Parameter: 1793d382aafbSBarry Smith . a - pointer to copy space 1794d382aafbSBarry Smith 1795d382aafbSBarry Smith Level: intermediate 1796d382aafbSBarry Smith 1797d382aafbSBarry Smith Compile Option: 1798d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1799d382aafbSBarry Smith for memory copies on double precision values. 1800d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1801d382aafbSBarry Smith for memory copies on double precision values. 1802d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1803d382aafbSBarry Smith for memory copies on double precision values. 1804d382aafbSBarry Smith 1805d382aafbSBarry Smith Note: 1806580bdb30SBarry Smith Prefer PetscArraycpy() 1807d382aafbSBarry Smith This routine is analogous to memcpy(). 18081fd49c25SBarry Smith Not available from Fortran 18091fd49c25SBarry Smith 1810f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1811f5f57ec0SBarry Smith 1812580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1813d382aafbSBarry Smith 1814d382aafbSBarry Smith @*/ 18157087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1816d382aafbSBarry Smith { 1817d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1818c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1819c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1820a7e36092SMatthew G Knepley PetscFunctionBegin; 1821e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1822e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1823a7e36092SMatthew G Knepley #else 1824d382aafbSBarry Smith PetscFunctionBegin; 1825a7e36092SMatthew G Knepley #endif 1826a47a537aSLisandro Dalcin if (a != b && n > 0) { 1827d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1828e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1829d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1830d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1831d382aafbSBarry Smith #endif 1832d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1833c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1834d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1835d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1836c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1837c5df96a5SBarry Smith PetscErrorCode ierr; 1838c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18398b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1840d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1841d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1842d382aafbSBarry Smith #else 1843d382aafbSBarry Smith size_t i; 1844d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1845d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1846d382aafbSBarry Smith #endif 1847d382aafbSBarry Smith } else { 1848d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1849d382aafbSBarry Smith } 1850d382aafbSBarry Smith #else 1851d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1852d382aafbSBarry Smith #endif 1853d382aafbSBarry Smith } 1854d382aafbSBarry Smith PetscFunctionReturn(0); 1855d382aafbSBarry Smith } 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith /*@C 1858d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith Not Collective 1861d382aafbSBarry Smith 1862d382aafbSBarry Smith Input Parameters: 1863d382aafbSBarry Smith + a - pointer to beginning memory location 1864d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1865d382aafbSBarry Smith 1866d382aafbSBarry Smith Level: intermediate 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith Compile Option: 1869d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1870d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1871d382aafbSBarry Smith 18721fd49c25SBarry Smith Not available from Fortran 1873857a15f1SBarry Smith Prefer PetscArrayzero() 18741fd49c25SBarry Smith 1875503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1876503cfb0cSBarry Smith 1877580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1878d382aafbSBarry Smith @*/ 18797087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1880d382aafbSBarry Smith { 1881d382aafbSBarry Smith if (n > 0) { 1882d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 188318703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1886d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1887d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1888d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1889d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1890d382aafbSBarry Smith } else { 1891d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1892d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1893d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1894d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1895d382aafbSBarry Smith } else { 1896d382aafbSBarry Smith #endif 1897d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1898d382aafbSBarry Smith bzero((char *)a,n); 1899d382aafbSBarry Smith #else 1900d382aafbSBarry Smith memset((char*)a,0,n); 1901d382aafbSBarry Smith #endif 1902d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1903d382aafbSBarry Smith } 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith } 1906d382aafbSBarry Smith return 0; 1907d382aafbSBarry Smith } 1908d382aafbSBarry Smith 1909d382aafbSBarry Smith /*MC 1910580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1911580bdb30SBarry Smith 1912580bdb30SBarry Smith Synopsis: 1913580bdb30SBarry Smith #include <petscsys.h> 1914580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1915580bdb30SBarry Smith 1916580bdb30SBarry Smith Not Collective 1917580bdb30SBarry Smith 1918580bdb30SBarry Smith Input Parameters: 1919580bdb30SBarry Smith + str1 - First array 1920580bdb30SBarry Smith . str2 - Second array 1921580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1922580bdb30SBarry Smith 1923580bdb30SBarry Smith Output Parameters: 1924580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1925580bdb30SBarry Smith 1926580bdb30SBarry Smith Level: intermediate 1927580bdb30SBarry Smith 1928580bdb30SBarry Smith Note: 1929857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1930580bdb30SBarry Smith The arrays must be of the same type 1931580bdb30SBarry Smith 1932580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1933580bdb30SBarry Smith PetscArraymove() 1934580bdb30SBarry Smith M*/ 19359e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1936580bdb30SBarry Smith 19378f8f2f0dSBarry Smith /*MC 1938580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1939580bdb30SBarry Smith do not overlap 1940580bdb30SBarry Smith 1941580bdb30SBarry Smith Synopsis: 1942580bdb30SBarry Smith #include <petscsys.h> 1943580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1944580bdb30SBarry Smith 1945580bdb30SBarry Smith Not Collective 1946580bdb30SBarry Smith 1947580bdb30SBarry Smith Input Parameters: 1948580bdb30SBarry Smith + str1 - First array 1949580bdb30SBarry Smith . str2 - Second array 1950580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1951580bdb30SBarry Smith 1952580bdb30SBarry Smith Level: intermediate 1953580bdb30SBarry Smith 1954580bdb30SBarry Smith Note: 1955857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1956580bdb30SBarry Smith The arrays must be of the same type 1957580bdb30SBarry Smith 1958580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1959580bdb30SBarry Smith M*/ 19609e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1961580bdb30SBarry Smith 19628f8f2f0dSBarry Smith /*MC 1963580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1964580bdb30SBarry Smith 1965580bdb30SBarry Smith Synopsis: 1966580bdb30SBarry Smith #include <petscsys.h> 1967580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1968580bdb30SBarry Smith 1969580bdb30SBarry Smith Not Collective 1970580bdb30SBarry Smith 1971580bdb30SBarry Smith Input Parameters: 1972de25709eSStefano Zampini + str1 - First array (destination) 1973de25709eSStefano Zampini . str2 - Second array (source) 1974580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1975580bdb30SBarry Smith 1976580bdb30SBarry Smith Level: intermediate 1977580bdb30SBarry Smith 1978580bdb30SBarry Smith Note: 1979857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1980580bdb30SBarry Smith The arrays must be of the same type 1981580bdb30SBarry Smith 1982580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1983580bdb30SBarry Smith M*/ 19849e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1985580bdb30SBarry Smith 19868f8f2f0dSBarry Smith /*MC 1987580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1988580bdb30SBarry Smith 1989580bdb30SBarry Smith Synopsis: 1990580bdb30SBarry Smith #include <petscsys.h> 1991580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1992580bdb30SBarry Smith 1993580bdb30SBarry Smith Not Collective 1994580bdb30SBarry Smith 1995580bdb30SBarry Smith Input Parameters: 1996580bdb30SBarry Smith + str1 - array 1997580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1998580bdb30SBarry Smith 1999580bdb30SBarry Smith Level: intermediate 2000580bdb30SBarry Smith 2001580bdb30SBarry Smith Note: 2002857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2003580bdb30SBarry Smith 2004580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2005580bdb30SBarry Smith M*/ 20069e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2007580bdb30SBarry Smith 2008d382aafbSBarry Smith /*MC 2009d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2010d382aafbSBarry Smith 2011eca87e8dSBarry Smith Synopsis: 2012aaa7dc30SBarry Smith #include <petscsys.h> 2013eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2014eca87e8dSBarry Smith 2015d382aafbSBarry Smith Not Collective 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith Input Parameters: 2018d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2019d382aafbSBarry Smith . n - number of elements to fetch 2020d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 202150d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith Level: developer 2024d382aafbSBarry Smith 2025d382aafbSBarry Smith Notes: 2026d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2027d382aafbSBarry Smith 202850d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 202950d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 203050d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 203163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 203263cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 203363cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2036d382aafbSBarry Smith address). 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith M*/ 2039d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2040d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2041d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2042d382aafbSBarry Smith } while (0) 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith /* 2045d382aafbSBarry Smith Determine if some of the kernel computation routines use 2046d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2047d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2048d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2049e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2050d382aafbSBarry Smith */ 2051d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2054d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2055d382aafbSBarry Smith #endif 2056d382aafbSBarry Smith 20575a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20585a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2059d382aafbSBarry Smith #endif 2060d382aafbSBarry Smith 2061d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2062d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2063d382aafbSBarry Smith #endif 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2066d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2067d382aafbSBarry Smith #endif 2068d382aafbSBarry Smith 2069d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2070d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2071d382aafbSBarry Smith #endif 2072d382aafbSBarry Smith 2073d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2074d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2075d382aafbSBarry Smith #endif 2076d382aafbSBarry Smith 2077d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2078d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2079d382aafbSBarry Smith #endif 2080d382aafbSBarry Smith 2081d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2082d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2083d382aafbSBarry Smith #endif 2084d382aafbSBarry Smith 2085d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2086d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2087d382aafbSBarry Smith #endif 2088d382aafbSBarry Smith 2089d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2090d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2091d382aafbSBarry Smith #endif 2092d382aafbSBarry Smith 2093d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2094d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2095d382aafbSBarry Smith #endif 2096d382aafbSBarry Smith 2097d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2098d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2099d382aafbSBarry Smith #endif 2100d382aafbSBarry Smith 2101d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2102d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2103d382aafbSBarry Smith #endif 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2106d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2107d382aafbSBarry Smith #endif 2108d382aafbSBarry Smith 2109d382aafbSBarry Smith #endif 2110d382aafbSBarry Smith 2111d382aafbSBarry Smith /* 2112d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2113d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2114d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2115d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2116d382aafbSBarry Smith ugly extern "C" {} wrappers. 2117d382aafbSBarry Smith */ 2118d382aafbSBarry Smith #if defined(__cplusplus) 2119d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2120d382aafbSBarry Smith # define EXTERN_C_END } 2121d382aafbSBarry Smith #else 2122d382aafbSBarry Smith # define EXTERN_C_BEGIN 2123d382aafbSBarry Smith # define EXTERN_C_END 2124d382aafbSBarry Smith #endif 2125d382aafbSBarry Smith 2126d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2127d382aafbSBarry Smith 2128d382aafbSBarry Smith /*MC 2129d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2130d382aafbSBarry Smith communication 2131d382aafbSBarry Smith 2132d382aafbSBarry Smith Level: beginner 2133d382aafbSBarry Smith 2134d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2135d382aafbSBarry Smith 2136d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2137d382aafbSBarry Smith M*/ 2138d382aafbSBarry Smith 2139d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2140014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2141014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2142c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2143c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2144c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2145c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2146d382aafbSBarry Smith #endif 2147d382aafbSBarry Smith 2148d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2151d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2152d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2153d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2154d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2155d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2156eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2157d382aafbSBarry Smith 215861b0d812SBarry Smith /*@C 2159c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2160c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2161c73702f5SBarry Smith 2162c73702f5SBarry Smith Not Collective 2163c73702f5SBarry Smith 2164c73702f5SBarry Smith Input Parameter: 2165c73702f5SBarry Smith . a - the PetscInt64 value 2166c73702f5SBarry Smith 2167c73702f5SBarry Smith Output Parameter: 2168c73702f5SBarry Smith . b - the resulting PetscInt value 2169c73702f5SBarry Smith 2170c73702f5SBarry Smith Level: advanced 2171c73702f5SBarry Smith 2172c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2173c73702f5SBarry Smith 2174c73702f5SBarry Smith Not available from Fortran 2175c73702f5SBarry Smith 217661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2177c73702f5SBarry Smith @*/ 2178c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2179c73702f5SBarry Smith { 2180c73702f5SBarry Smith PetscFunctionBegin; 2181c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2182e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2183c73702f5SBarry Smith #endif 2184c73702f5SBarry Smith *b = (PetscInt)(a); 2185c73702f5SBarry Smith PetscFunctionReturn(0); 2186c73702f5SBarry Smith } 2187c73702f5SBarry Smith 2188c73702f5SBarry Smith /*@C 218961b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 219061b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 219161b0d812SBarry Smith 219261b0d812SBarry Smith Not Collective 219361b0d812SBarry Smith 219461b0d812SBarry Smith Input Parameter: 219561b0d812SBarry Smith . a - the PetscInt value 219661b0d812SBarry Smith 219761b0d812SBarry Smith Output Parameter: 219861b0d812SBarry Smith . b - the resulting PetscBLASInt value 219961b0d812SBarry Smith 220061b0d812SBarry Smith Level: advanced 220161b0d812SBarry Smith 22020bc7d38cSBarry Smith Notes: 22031fd49c25SBarry Smith Not available from Fortran 2204f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22051fd49c25SBarry Smith 2206c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 220761b0d812SBarry Smith @*/ 2208c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2209c5df96a5SBarry Smith { 2210c5df96a5SBarry Smith PetscFunctionBegin; 2211c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2212e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2213c5df96a5SBarry Smith #endif 2214e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2215c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2216c5df96a5SBarry Smith PetscFunctionReturn(0); 2217c5df96a5SBarry Smith } 2218c5df96a5SBarry Smith 221961b0d812SBarry Smith /*@C 2220eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2221eee0c0a6SToby Isaac 2222eee0c0a6SToby Isaac Not Collective 2223eee0c0a6SToby Isaac 2224eee0c0a6SToby Isaac Input Parameter: 2225eee0c0a6SToby Isaac . a - the PetscInt value 2226eee0c0a6SToby Isaac 2227eee0c0a6SToby Isaac Output Parameter: 2228eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2229eee0c0a6SToby Isaac 2230eee0c0a6SToby Isaac Level: advanced 2231eee0c0a6SToby Isaac 2232eee0c0a6SToby Isaac Notes: 2233eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2234eee0c0a6SToby Isaac 2235eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2236eee0c0a6SToby Isaac @*/ 2237ae77d22fSJunchao Zhang PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2238eee0c0a6SToby Isaac { 2239eee0c0a6SToby Isaac PetscFunctionBegin; 2240eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2241e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2242eee0c0a6SToby Isaac #endif 2243e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2244eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2245eee0c0a6SToby Isaac PetscFunctionReturn(0); 2246eee0c0a6SToby Isaac } 2247eee0c0a6SToby Isaac 2248eee0c0a6SToby Isaac /*@C 224961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 225061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 225161b0d812SBarry Smith 225261b0d812SBarry Smith Not Collective 225361b0d812SBarry Smith 225461b0d812SBarry Smith Input Parameter: 225561b0d812SBarry Smith . a - the PetscInt value 225661b0d812SBarry Smith 225761b0d812SBarry Smith Output Parameter: 225861b0d812SBarry Smith . b - the resulting PetscMPIInt value 225961b0d812SBarry Smith 226061b0d812SBarry Smith Level: advanced 226161b0d812SBarry Smith 22621fd49c25SBarry Smith Not available from Fortran 22631fd49c25SBarry Smith 2264c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 226561b0d812SBarry Smith @*/ 22664dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22674dc2109aSBarry Smith { 22684dc2109aSBarry Smith PetscFunctionBegin; 22694dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2270e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 22714dc2109aSBarry Smith #endif 2272c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22734dc2109aSBarry Smith PetscFunctionReturn(0); 22744dc2109aSBarry Smith } 22754dc2109aSBarry Smith 2276bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22772f18eb33SBarry Smith 22782f18eb33SBarry Smith /*@C 22792f18eb33SBarry Smith 22802f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22812f18eb33SBarry Smith 22822f18eb33SBarry Smith Not Collective 22832f18eb33SBarry Smith 2284d8d19677SJose E. Roman Input Parameters: 22852f18eb33SBarry Smith + a - the PetscReal value 22862f18eb33SBarry Smith - b - the second value 22872f18eb33SBarry Smith 2288390e1bf2SBarry Smith Returns: 2289390e1bf2SBarry Smith the result as a PetscInt value 22902f18eb33SBarry Smith 2291bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22922f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22932f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22942f18eb33SBarry Smith 2295e28ce29aSPatrick Sanan Developers Note: 2296e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22972f18eb33SBarry Smith 22982f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22992f18eb33SBarry Smith 23001fd49c25SBarry Smith Not available from Fortran 23011fd49c25SBarry Smith 23022f18eb33SBarry Smith Level: advanced 23032f18eb33SBarry Smith 230461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23052f18eb33SBarry Smith @*/ 23062f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23072f18eb33SBarry Smith { 2308bafee8b4SSatish Balay PetscInt64 r; 23092f18eb33SBarry Smith 2310bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23112f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23122f18eb33SBarry Smith return (PetscInt) r; 23132f18eb33SBarry Smith } 23142f18eb33SBarry Smith 23152f18eb33SBarry Smith /*@C 23162f18eb33SBarry Smith 23172f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23182f18eb33SBarry Smith 23192f18eb33SBarry Smith Not Collective 23202f18eb33SBarry Smith 2321d8d19677SJose E. Roman Input Parameters: 23222f18eb33SBarry Smith + a - the PetscInt value 23232f18eb33SBarry Smith - b - the second value 23242f18eb33SBarry Smith 2325390e1bf2SBarry Smith Returns: 2326390e1bf2SBarry Smith the result as a PetscInt value 23272f18eb33SBarry Smith 2328bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23292f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23302f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23312f18eb33SBarry Smith 23321fd49c25SBarry Smith Not available from Fortran 23331fd49c25SBarry Smith 23342f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23352f18eb33SBarry Smith 23362f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23372f18eb33SBarry Smith 23382f18eb33SBarry Smith Level: advanced 23392f18eb33SBarry Smith 234061778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23412f18eb33SBarry Smith @*/ 23422f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23432f18eb33SBarry Smith { 2344bafee8b4SSatish Balay PetscInt64 r; 23452f18eb33SBarry Smith 2346bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23472f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23482f18eb33SBarry Smith return (PetscInt) r; 23492f18eb33SBarry Smith } 23502f18eb33SBarry Smith 2351f91af8c7SBarry Smith /*@C 2352f91af8c7SBarry Smith 2353f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2354f91af8c7SBarry Smith 2355f91af8c7SBarry Smith Not Collective 2356f91af8c7SBarry Smith 2357d8d19677SJose E. Roman Input Parameters: 2358f91af8c7SBarry Smith + a - the PetscInt value 2359f91af8c7SBarry Smith - b - the second value 2360f91af8c7SBarry Smith 2361390e1bf2SBarry Smith Returns: 2362390e1bf2SBarry Smith the result as a PetscInt value 2363f91af8c7SBarry Smith 2364bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2365f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2366f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2367f91af8c7SBarry Smith 2368f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2369f91af8c7SBarry Smith 2370f5f57ec0SBarry Smith Not available from Fortran 2371f5f57ec0SBarry Smith 2372f91af8c7SBarry Smith Level: advanced 2373f91af8c7SBarry Smith 237461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2375f91af8c7SBarry Smith @*/ 2376f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2377f91af8c7SBarry Smith { 2378bafee8b4SSatish Balay PetscInt64 r; 2379f91af8c7SBarry Smith 2380bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2381f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2382f91af8c7SBarry Smith return (PetscInt) r; 2383f91af8c7SBarry Smith } 2384f91af8c7SBarry Smith 23852f18eb33SBarry Smith /*@C 23862f18eb33SBarry Smith 23872f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23882f18eb33SBarry Smith 23892f18eb33SBarry Smith Not Collective 23902f18eb33SBarry Smith 2391d8d19677SJose E. Roman Input Parameters: 23922f18eb33SBarry Smith + a - the PetscInt value 23932f18eb33SBarry Smith - b - the second value 23942f18eb33SBarry Smith 2395d8d19677SJose E. Roman Output Parameter: 2396390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23972f18eb33SBarry Smith 2398bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23992f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24002f18eb33SBarry Smith 2401f5f57ec0SBarry Smith Not available from Fortran 2402f5f57ec0SBarry Smith 2403220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24042f18eb33SBarry Smith 24052f18eb33SBarry Smith Level: advanced 24062f18eb33SBarry Smith 2407220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24082f18eb33SBarry Smith @*/ 24092f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24102f18eb33SBarry Smith { 2411bafee8b4SSatish Balay PetscInt64 r; 24122f18eb33SBarry Smith 24132f18eb33SBarry Smith PetscFunctionBegin; 2414bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24152f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 241661778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24172f18eb33SBarry Smith #endif 2418f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2419f91af8c7SBarry Smith PetscFunctionReturn(0); 2420f91af8c7SBarry Smith } 2421f91af8c7SBarry Smith 2422f91af8c7SBarry Smith /*@C 2423f91af8c7SBarry Smith 2424fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2425f91af8c7SBarry Smith 2426f91af8c7SBarry Smith Not Collective 2427f91af8c7SBarry Smith 2428d8d19677SJose E. Roman Input Parameters: 2429f91af8c7SBarry Smith + a - the PetscInt value 2430f91af8c7SBarry Smith - b - the second value 2431f91af8c7SBarry Smith 2432d8d19677SJose E. Roman Output Parameter: 2433390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2434f91af8c7SBarry Smith 2435bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2436f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2437f91af8c7SBarry Smith 2438f5f57ec0SBarry Smith Not available from Fortran 2439f5f57ec0SBarry Smith 2440f91af8c7SBarry Smith Level: advanced 2441f91af8c7SBarry Smith 244261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2443f91af8c7SBarry Smith @*/ 2444f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2445f91af8c7SBarry Smith { 2446bafee8b4SSatish Balay PetscInt64 r; 2447f91af8c7SBarry Smith 2448f91af8c7SBarry Smith PetscFunctionBegin; 2449bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2450f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 245161778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2452f91af8c7SBarry Smith #endif 2453f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24542f18eb33SBarry Smith PetscFunctionReturn(0); 24552f18eb33SBarry Smith } 2456c5df96a5SBarry Smith 2457d382aafbSBarry Smith /* 24582981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2459d382aafbSBarry Smith */ 2460d382aafbSBarry Smith #if defined(hz) 2461d382aafbSBarry Smith # undef hz 2462d382aafbSBarry Smith #endif 2463d382aafbSBarry Smith 246415a5570dSLisandro Dalcin #include <limits.h> 246515a5570dSLisandro Dalcin 246615a5570dSLisandro Dalcin /* The number of bits in a byte */ 246715a5570dSLisandro Dalcin 246815a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 246915a5570dSLisandro Dalcin 2470d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2471d382aafbSBarry Smith # include <sys/types.h> 2472d382aafbSBarry Smith #endif 2473d382aafbSBarry Smith 2474d382aafbSBarry Smith /*MC 2475d382aafbSBarry Smith 247666d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 247766d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 247866d79e26SBarry Smith 247966d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 248066d79e26SBarry Smith 248166d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 248266d79e26SBarry Smith 248366d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 248466d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 248566d79e26SBarry Smith 248666d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 248766d79e26SBarry Smith 248866d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 248966d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 249066d79e26SBarry Smith version number (x.y.z). 249166d79e26SBarry Smith 249266d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 249366d79e26SBarry Smith 249466d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 249566d79e26SBarry Smith 249666d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 249766d79e26SBarry Smith 249866d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 249966d79e26SBarry Smith 2500*cbc12506SBarry Smith PETSC_VERSION_() is deprecated and will eventually be removed. 250166d79e26SBarry Smith 2502*cbc12506SBarry Smith Level: intermediate 250366d79e26SBarry Smith 250466d79e26SBarry Smith M*/ 250566d79e26SBarry Smith 2506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 251227710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25135f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2514d382aafbSBarry Smith 25156a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25166a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25176a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2519ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 252022ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2522f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 252360e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2524d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25286c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 252917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 253017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25325569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 253417df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 253639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2538745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 253939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25436c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25446c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2545e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2546ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2547ce605777SToby Isaac 25484d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2549676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2550676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2551676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25524d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2553676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2554676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2555676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2556676f2a66SJacob Faibussowitsch 2557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2559d382aafbSBarry Smith 256076bdecfbSBarry Smith /*J 2561d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2562d382aafbSBarry Smith 2563d382aafbSBarry Smith Level: beginner 2564d382aafbSBarry Smith 2565e28ce29aSPatrick Sanan Notes: 2566e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 256725ccb61fSToby Isaac with the option --download-sprng or --download-random123 2568d382aafbSBarry Smith 25698f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 257076bdecfbSBarry Smith J*/ 257119fd82e9SBarry Smith typedef const char* PetscRandomType; 2572d382aafbSBarry Smith #define PETSCRAND "rand" 2573d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2574d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2575c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 257625ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2577808ba619SStefano Zampini #define PETSCCURAND "curand" 2578d382aafbSBarry Smith 2579d382aafbSBarry Smith /* Logging support */ 2580014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2581d382aafbSBarry Smith 2582607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2583d382aafbSBarry Smith 2584d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2585140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2586d382aafbSBarry Smith 2587bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 258819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 259019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2591fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2593d382aafbSBarry Smith 2594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2597808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2598808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2605d382aafbSBarry Smith 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 261397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26148a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 261597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2616d382aafbSBarry Smith 261730815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 261830815ce0SLisandro Dalcin 26199860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26209860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2621f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2622f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2630c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2631e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2632c891a504SStefano Zampini #endif 2633d382aafbSBarry Smith 2634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2635014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2636014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2637d382aafbSBarry Smith 2638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26442a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2645d382aafbSBarry Smith 2646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2651cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2652cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2653d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2654d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2655d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2656d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26576afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26586afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26596afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26606afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26616afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2662d382aafbSBarry Smith 26636145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26646145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26656145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26666145cd65SJed Brown 2667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2668d382aafbSBarry Smith 2669ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2670ce94432eSBarry Smith 267145487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 267245487dadSJed Brown 2673d382aafbSBarry Smith struct _n_PetscSubcomm { 2674d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2675d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2676306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 267745487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 267845487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2679708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 268045487dadSJed Brown PetscSubcommType type; 2681e5acf8a4SHong Zhang char *subcommprefix; 2682d382aafbSBarry Smith }; 2683d382aafbSBarry Smith 2684c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2685306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 268636be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 269165d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2692053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2693f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2694e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2695a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2696a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2697a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2698d382aafbSBarry Smith 26999962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27009962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27019962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27079962606eSBarry Smith 27085e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27095f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27105f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27115f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27125f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27135e71baefSBarry Smith 2714a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2715a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2716a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2717a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2718a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2719a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2720a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2721a32e93adSJunchao Zhang 272213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27230f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 272413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2725137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2726137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2727137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 272813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 272913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27300f453b92SJed Brown 2731471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2732471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2733471ecdacSJed Brown * possible. */ 27346a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2735d382aafbSBarry Smith 27369de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27379de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27389de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27399de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27409de0f6ecSBarry Smith 2741ace2fbaeSBarry Smith #include <stdarg.h> 2742ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2743ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2744ace2fbaeSBarry Smith 2745268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2746fbfcfee5SBarry Smith 27471f817a21SBarry Smith /*@C 27481f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27491f817a21SBarry Smith 27501f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27511f817a21SBarry Smith 27521f817a21SBarry Smith Input Parameters: 27531f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27541f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27551f817a21SBarry Smith 2756850545d0SSatish Balay Level: intermediate 2757850545d0SSatish Balay 2758f5f57ec0SBarry Smith Not available from Fortran 2759f5f57ec0SBarry Smith 27601f817a21SBarry Smith Options Database: 2761063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27621f817a21SBarry Smith @*/ 2763dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2764dff31646SBarry Smith { 2765dff31646SBarry Smith size_t len; 2766dff31646SBarry Smith char *vstring; 2767dff31646SBarry Smith PetscErrorCode ierr; 2768dff31646SBarry Smith 27691f817a21SBarry Smith PetscFunctionBegin; 27708d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2771dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 277235005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2773580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2774dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27751f817a21SBarry Smith PetscFunctionReturn(0); 2776dff31646SBarry Smith } 2777dff31646SBarry Smith 2778b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2779fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2780fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2781f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2782fe278a28SBarry Smith 2783f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2784f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2785b967cddfSBarry Smith 27869f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27879f4d3c52SBarry Smith 278804102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2789763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2790dff31646SBarry Smith 279168e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27925dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2793d382aafbSBarry Smith 2794b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2795503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2796df05ca09SBarry Smith { 2797df05ca09SBarry Smith unsigned int c,hash = 5381; 2798df05ca09SBarry Smith 2799503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2800df05ca09SBarry Smith return hash; 2801df05ca09SBarry Smith } 280277a5e07dSBarry Smith 280377a5e07dSBarry Smith /*MC 280477a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 280577a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 280677a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 280777a5e07dSBarry Smith 2808d083f849SBarry Smith Collective 280977a5e07dSBarry Smith 281077a5e07dSBarry Smith Synopsis: 281177a5e07dSBarry Smith #include <petscsys.h> 281277a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 281377a5e07dSBarry Smith 281477a5e07dSBarry Smith Input Parameters: 2815df05ca09SBarry Smith + a - pointer to the input data to be reduced 2816df05ca09SBarry Smith . c - the number of MPI data items in a and b 2817df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2818df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2819df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 282077a5e07dSBarry Smith 282177a5e07dSBarry Smith Output Parameter: 2822df05ca09SBarry Smith . b - the reduced values 282377a5e07dSBarry Smith 2824e28ce29aSPatrick Sanan Notes: 2825e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 282677a5e07dSBarry Smith 2827df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2828df05ca09SBarry Smith 2829df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2830df05ca09SBarry Smith 283177a5e07dSBarry Smith Level: developer 283277a5e07dSBarry Smith 283377a5e07dSBarry Smith .seealso: MPI_Allreduce() 283477a5e07dSBarry Smith M*/ 2835df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2836df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2837df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2838df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2839df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2840df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2841df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2842df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2843df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2844df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2845df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2846df05ca09SBarry Smith } while (0) 2847b2566f29SBarry Smith #else 2848df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2849b2566f29SBarry Smith #endif 2850b2566f29SBarry Smith 2851b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28528198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28538198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28542f065d89SBarry Smith #endif 28558198064fSBarry Smith 2856cd88fca5SStefano Zampini /* this is a vile hack */ 2857cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2858961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2859961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2860961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2861961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2862cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2863cd88fca5SStefano Zampini #endif 2864961fb248SStefano Zampini #endif 2865cd88fca5SStefano Zampini 286612801b39SBarry Smith /* 286760fbe2beSVaclav Hapla List of external packages and queries on it 286860fbe2beSVaclav Hapla */ 286960fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 287060fbe2beSVaclav Hapla 2871d382aafbSBarry Smith #endif 2872