1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 139a7886beaSBarry Smith This usually happens because 140a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142a7886beaSBarry Smith */ 143a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 144a7886beaSBarry Smith # if !defined(__MPIUNI_H) 145a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146a7886beaSBarry Smith # endif 14741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 15041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 15141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15241f4af4cSSatish Balay # endif 15341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15841f4af4cSSatish Balay # endif 159a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 16041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164a7886beaSBarry Smith # endif 165a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 167a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170a7886beaSBarry Smith # endif 17141f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 17241f4af4cSSatish Balay # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 173a7886beaSBarry Smith #endif 174a7886beaSBarry Smith 175a7886beaSBarry Smith /* 1762981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 177d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 178d382aafbSBarry Smith */ 179d382aafbSBarry Smith #include <stdio.h> 180d382aafbSBarry Smith 181d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 182d382aafbSBarry Smith #if !defined(MPIAPI) 183d382aafbSBarry Smith #define MPIAPI 184d382aafbSBarry Smith #endif 185d382aafbSBarry Smith 1861cc8b206SBarry Smith /* 1871cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1881cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1891cc8b206SBarry Smith does not match the actual type of the argument being passed in 1901cc8b206SBarry Smith */ 191c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 192894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 193894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1948ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1958ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 196894dd566SJed Brown # endif 197894dd566SJed Brown #endif 198894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 199894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2008ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2018ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 202894dd566SJed Brown #endif 203b3506946SBarry Smith 2045a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 205df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 206e28ce29aSPatrick Sanan 207e28ce29aSPatrick Sanan /*MC 208e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 209e28ce29aSPatrick Sanan 210e28ce29aSPatrick Sanan Notes: 211e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 212e28ce29aSPatrick Sanan 213e28ce29aSPatrick Sanan Level: beginner 214e28ce29aSPatrick Sanan 215e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 216e28ce29aSPatrick Sanan M*/ 217e28ce29aSPatrick Sanan 21837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 219bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 220a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 221fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 222bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 223a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 224f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 225bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 226a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 227236ed0a3SSatish Balay #else 228bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 229236ed0a3SSatish Balay #endif 230b7b8f77aSBarry Smith 2317cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 232b7b8f77aSBarry Smith 233d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 234bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 235a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 236d382aafbSBarry Smith #else 237d382aafbSBarry Smith # define MPIU_INT MPI_INT 238a05e1a72SSatish Balay # define PetscInt_FMT "d" 239d382aafbSBarry Smith #endif 240d382aafbSBarry Smith 241503cfb0cSBarry Smith /* 242503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 243503cfb0cSBarry Smith */ 244e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 245d382aafbSBarry Smith 246d382aafbSBarry Smith /* 247d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 248d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 249d382aafbSBarry Smith */ 250014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 251d382aafbSBarry Smith 252d382aafbSBarry Smith /* 253d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 254d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 255d382aafbSBarry Smith */ 256014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 257d382aafbSBarry Smith 258d382aafbSBarry Smith /*MC 259d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 260d382aafbSBarry Smith 261d382aafbSBarry Smith Synopsis: 262aaa7dc30SBarry Smith #include <petscsys.h> 263ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 264d382aafbSBarry Smith 265eca87e8dSBarry Smith Not Collective 266eca87e8dSBarry Smith 267d382aafbSBarry Smith Input Parameters: 268d382aafbSBarry Smith . cond - condition or expression 269d382aafbSBarry Smith 270e28ce29aSPatrick Sanan Notes: 271e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 272d382aafbSBarry Smith branch is unlikely. 273d382aafbSBarry Smith 274d382aafbSBarry Smith Level: advanced 275d382aafbSBarry Smith 276d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 277d382aafbSBarry Smith M*/ 278d382aafbSBarry Smith 279d382aafbSBarry Smith /*MC 280d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 281d382aafbSBarry Smith 282d382aafbSBarry Smith Synopsis: 283aaa7dc30SBarry Smith #include <petscsys.h> 28423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 285d382aafbSBarry Smith 286eca87e8dSBarry Smith Not Collective 287eca87e8dSBarry Smith 288d382aafbSBarry Smith Input Parameters: 289d382aafbSBarry Smith . cond - condition or expression 290d382aafbSBarry Smith 291e28ce29aSPatrick Sanan Notes: 292e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 293d382aafbSBarry Smith branch is likely. 294d382aafbSBarry Smith 295d382aafbSBarry Smith Level: advanced 296d382aafbSBarry Smith 297d382aafbSBarry Smith .seealso: PetscUnlikely() 298d382aafbSBarry Smith M*/ 299d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 300d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 301d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 302d382aafbSBarry Smith #else 303cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 304cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 305d382aafbSBarry Smith #endif 306d382aafbSBarry Smith 307d382aafbSBarry Smith /* 308d382aafbSBarry Smith Declare extern C stuff after including external header files 309d382aafbSBarry Smith */ 310d382aafbSBarry Smith 3116a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 31270b3c8c7SBarry Smith 3138b49ba18SBarry Smith /* 314390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3158b49ba18SBarry Smith */ 3168b49ba18SBarry Smith #include <petscmath.h> 3178b49ba18SBarry Smith 3186a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 319d382aafbSBarry Smith 320d382aafbSBarry Smith /*MC 3210298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 322d382aafbSBarry Smith 323d382aafbSBarry Smith Level: beginner 324d382aafbSBarry Smith 325e28ce29aSPatrick Sanan Note: 326e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 327d382aafbSBarry Smith some default 328d382aafbSBarry Smith 329e28ce29aSPatrick Sanan Fortran Notes: 330e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 331d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 332d382aafbSBarry Smith 333e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 334d382aafbSBarry Smith 335d382aafbSBarry Smith M*/ 3360298fd71SBarry Smith #define PETSC_IGNORE NULL 337d382aafbSBarry Smith 338c528d872SBarry Smith /* This is deprecated */ 339c528d872SBarry Smith #define PETSC_NULL NULL 340c528d872SBarry Smith 341d382aafbSBarry Smith /*MC 342557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 343557d4da8SBarry Smith where you wish PETSc to use the default. 344557d4da8SBarry Smith 345557d4da8SBarry Smith Level: beginner 346557d4da8SBarry Smith 347e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 348557d4da8SBarry Smith 349557d4da8SBarry Smith M*/ 350557d4da8SBarry Smith #define PETSC_DECIDE -1 351557d4da8SBarry Smith 352557d4da8SBarry Smith /*MC 353d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 354d382aafbSBarry Smith where you wish PETSc to compute the required value. 355d382aafbSBarry Smith 356d382aafbSBarry Smith Level: beginner 357d382aafbSBarry Smith 358e28ce29aSPatrick Sanan Developer Note: 359e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 360557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 361557d4da8SBarry Smith 3620298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 363d382aafbSBarry Smith 364d382aafbSBarry Smith M*/ 365d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 366d382aafbSBarry Smith 367d382aafbSBarry Smith /*MC 368557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 369557d4da8SBarry Smith where you wish PETSc to use the default. 370557d4da8SBarry Smith 371557d4da8SBarry Smith Level: beginner 372557d4da8SBarry Smith 373e28ce29aSPatrick Sanan Fortran Notes: 374e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 375557d4da8SBarry Smith 3760298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 377557d4da8SBarry Smith 378557d4da8SBarry Smith M*/ 379557d4da8SBarry Smith #define PETSC_DEFAULT -2 380557d4da8SBarry Smith 381557d4da8SBarry Smith /*MC 382d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 383ea8fe74dSBarry Smith all the processes that PETSc knows about. 384d382aafbSBarry Smith 385d382aafbSBarry Smith Level: beginner 386d382aafbSBarry Smith 387e28ce29aSPatrick Sanan Notes: 388e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 389d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 390d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 391a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 392a990b902SBarry Smith 393a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 394a990b902SBarry Smith is called because it may not have a valid value yet. 395d382aafbSBarry Smith 396d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 397d382aafbSBarry Smith 398d382aafbSBarry Smith M*/ 399014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 400d382aafbSBarry Smith 401d382aafbSBarry Smith /*MC 402503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 403d382aafbSBarry Smith 404d382aafbSBarry Smith Level: beginner 405d382aafbSBarry Smith 406e28ce29aSPatrick Sanan Notes: 407e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 408a990b902SBarry Smith 409d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 410d382aafbSBarry Smith 411d382aafbSBarry Smith M*/ 412d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 413d382aafbSBarry Smith 414d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 415014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 416014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4174cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 41882f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 419d382aafbSBarry Smith 420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 423d382aafbSBarry Smith 424d382aafbSBarry Smith /*MC 42595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 426d382aafbSBarry Smith 427eca87e8dSBarry Smith Synopsis: 428aaa7dc30SBarry Smith #include <petscsys.h> 429eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 430eca87e8dSBarry Smith 431eca87e8dSBarry Smith Not Collective 432eca87e8dSBarry Smith 433d382aafbSBarry Smith Input Parameter: 434d382aafbSBarry Smith . m - number of bytes to allocate 435d382aafbSBarry Smith 436d382aafbSBarry Smith Output Parameter: 437d382aafbSBarry Smith . result - memory allocated 438d382aafbSBarry Smith 439d382aafbSBarry Smith Level: beginner 440d382aafbSBarry Smith 44149d7da52SJed Brown Notes: 44249d7da52SJed Brown Memory is always allocated at least double aligned 443d382aafbSBarry Smith 44449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 445d382aafbSBarry Smith 446d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 447d382aafbSBarry Smith 448d382aafbSBarry Smith M*/ 44949d7da52SJed Brown #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 450d382aafbSBarry Smith 451d382aafbSBarry Smith /*MC 4523221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 4533221ece2SMatthew G. Knepley 4543221ece2SMatthew G. Knepley Synopsis: 4553221ece2SMatthew G. Knepley #include <petscsys.h> 4563221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4573221ece2SMatthew G. Knepley 4583221ece2SMatthew G. Knepley Not Collective 4593221ece2SMatthew G. Knepley 4603221ece2SMatthew G. Knepley Input Parameters: 4613221ece2SMatthew G. Knepley + m - number of bytes to allocate 4623221ece2SMatthew G. Knepley - result - initial memory allocated 4633221ece2SMatthew G. Knepley 4643221ece2SMatthew G. Knepley Output Parameter: 4653221ece2SMatthew G. Knepley . result - new memory allocated 4663221ece2SMatthew G. Knepley 4673221ece2SMatthew G. Knepley Level: developer 4683221ece2SMatthew G. Knepley 4693221ece2SMatthew G. Knepley Notes: 4703221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4713221ece2SMatthew G. Knepley 4723221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4733221ece2SMatthew G. Knepley 4743221ece2SMatthew G. Knepley M*/ 4753221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4763221ece2SMatthew G. Knepley 4773221ece2SMatthew G. Knepley /*MC 478503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 479d382aafbSBarry Smith 480d382aafbSBarry Smith Synopsis: 481aaa7dc30SBarry Smith #include <petscsys.h> 482d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 483d382aafbSBarry Smith 484eca87e8dSBarry Smith Not Collective 485eca87e8dSBarry Smith 486eca87e8dSBarry Smith Input Parameters: 487eca87e8dSBarry Smith . addr - address to align (any pointer type) 488eca87e8dSBarry Smith 489d382aafbSBarry Smith Level: developer 490d382aafbSBarry Smith 491d382aafbSBarry Smith .seealso: PetscMallocAlign() 492d382aafbSBarry Smith 493d382aafbSBarry Smith M*/ 494d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 495d382aafbSBarry Smith 496d382aafbSBarry Smith /*MC 497785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 498d382aafbSBarry Smith 499eca87e8dSBarry Smith Synopsis: 500aaa7dc30SBarry Smith #include <petscsys.h> 501785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 502785e854fSJed Brown 503785e854fSJed Brown Not Collective 504785e854fSJed Brown 505785e854fSJed Brown Input Parameter: 506390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 507785e854fSJed Brown 508785e854fSJed Brown Output Parameter: 509785e854fSJed Brown . r1 - memory allocated in first chunk 510785e854fSJed Brown 511e28ce29aSPatrick Sanan Note: 512e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 513390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 514390e1bf2SBarry Smith $ PetscInt *id; 515390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 516390e1bf2SBarry Smith not 517390e1bf2SBarry Smith $ PetscInt *id; 518390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 519390e1bf2SBarry Smith 520390e1bf2SBarry Smith Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 521390e1bf2SBarry Smith 522390e1bf2SBarry Smith Level: beginner 523785e854fSJed Brown 5241795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 525785e854fSJed Brown 526785e854fSJed Brown M*/ 5272553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 528785e854fSJed Brown 529785e854fSJed Brown /*MC 5301795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5311795a4d1SJed Brown 5321795a4d1SJed Brown Synopsis: 533aaa7dc30SBarry Smith #include <petscsys.h> 5341795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5351795a4d1SJed Brown 5361795a4d1SJed Brown Not Collective 5371795a4d1SJed Brown 5381795a4d1SJed Brown Input Parameter: 5391795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5401795a4d1SJed Brown 5411795a4d1SJed Brown Output Parameter: 5421795a4d1SJed Brown . r1 - memory allocated in first chunk 5431795a4d1SJed Brown 544e28ce29aSPatrick Sanan Notes: 545e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 546390e1bf2SBarry Smith 547390e1bf2SBarry Smith Level: beginner 5481795a4d1SJed Brown 5491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5501795a4d1SJed Brown 5511795a4d1SJed Brown M*/ 5522553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 5531795a4d1SJed Brown 5541795a4d1SJed Brown /*MC 555dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 556d382aafbSBarry Smith 557eca87e8dSBarry Smith Synopsis: 558aaa7dc30SBarry Smith #include <petscsys.h> 559dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 560eca87e8dSBarry Smith 561eca87e8dSBarry Smith Not Collective 562eca87e8dSBarry Smith 563d382aafbSBarry Smith Input Parameter: 564d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 565dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 566d382aafbSBarry Smith 567d382aafbSBarry Smith Output Parameter: 568d382aafbSBarry Smith + r1 - memory allocated in first chunk 569d382aafbSBarry Smith - r2 - memory allocated in second chunk 570d382aafbSBarry Smith 571d382aafbSBarry Smith Level: developer 572d382aafbSBarry Smith 5731795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 574d382aafbSBarry Smith 575d382aafbSBarry Smith M*/ 5762553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 577d382aafbSBarry Smith 578d382aafbSBarry Smith /*MC 5791795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 580d382aafbSBarry Smith 581eca87e8dSBarry Smith Synopsis: 582aaa7dc30SBarry Smith #include <petscsys.h> 5831795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 584eca87e8dSBarry Smith 585eca87e8dSBarry Smith Not Collective 586eca87e8dSBarry Smith 587d382aafbSBarry Smith Input Parameter: 588d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5891795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5901795a4d1SJed Brown 5911795a4d1SJed Brown Output Parameter: 5921795a4d1SJed Brown + r1 - memory allocated in first chunk 5931795a4d1SJed Brown - r2 - memory allocated in second chunk 5941795a4d1SJed Brown 5951795a4d1SJed Brown Level: developer 5961795a4d1SJed Brown 5971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 5981795a4d1SJed Brown 5991795a4d1SJed Brown M*/ 6002553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6011795a4d1SJed Brown 6021795a4d1SJed Brown /*MC 603dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 604d382aafbSBarry Smith 605d382aafbSBarry Smith Synopsis: 606aaa7dc30SBarry Smith #include <petscsys.h> 607dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 608d382aafbSBarry Smith 609d382aafbSBarry Smith Not Collective 610d382aafbSBarry Smith 611d382aafbSBarry Smith Input Parameter: 612d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 613d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 614dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 615d382aafbSBarry Smith 616d382aafbSBarry Smith Output Parameter: 617d382aafbSBarry Smith + r1 - memory allocated in first chunk 618d382aafbSBarry Smith . r2 - memory allocated in second chunk 619d382aafbSBarry Smith - r3 - memory allocated in third chunk 620d382aafbSBarry Smith 621d382aafbSBarry Smith Level: developer 622d382aafbSBarry Smith 6231795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 624d382aafbSBarry Smith 625d382aafbSBarry Smith M*/ 6262553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 627d382aafbSBarry Smith 628d382aafbSBarry Smith /*MC 6291795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 630d382aafbSBarry Smith 631eca87e8dSBarry Smith Synopsis: 632aaa7dc30SBarry Smith #include <petscsys.h> 6331795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 634eca87e8dSBarry Smith 635eca87e8dSBarry Smith Not Collective 636eca87e8dSBarry Smith 637d382aafbSBarry Smith Input Parameter: 638d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 639d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6401795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6411795a4d1SJed Brown 6421795a4d1SJed Brown Output Parameter: 6431795a4d1SJed Brown + r1 - memory allocated in first chunk 6441795a4d1SJed Brown . r2 - memory allocated in second chunk 6451795a4d1SJed Brown - r3 - memory allocated in third chunk 6461795a4d1SJed Brown 6471795a4d1SJed Brown Level: developer 6481795a4d1SJed Brown 6491795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6501795a4d1SJed Brown 6511795a4d1SJed Brown M*/ 6522553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 6531795a4d1SJed Brown 6541795a4d1SJed Brown /*MC 655dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 656d382aafbSBarry Smith 657d382aafbSBarry Smith Synopsis: 658aaa7dc30SBarry Smith #include <petscsys.h> 659dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 660d382aafbSBarry Smith 661d382aafbSBarry Smith Not Collective 662d382aafbSBarry Smith 663d382aafbSBarry Smith Input Parameter: 664d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 665d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 666d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 667dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 668d382aafbSBarry Smith 669d382aafbSBarry Smith Output Parameter: 670d382aafbSBarry Smith + r1 - memory allocated in first chunk 671d382aafbSBarry Smith . r2 - memory allocated in second chunk 672d382aafbSBarry Smith . r3 - memory allocated in third chunk 673d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 674d382aafbSBarry Smith 675d382aafbSBarry Smith Level: developer 676d382aafbSBarry Smith 6771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 678d382aafbSBarry Smith 679d382aafbSBarry Smith M*/ 6802553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 681d382aafbSBarry Smith 682d382aafbSBarry Smith /*MC 6831795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 684d382aafbSBarry Smith 685eca87e8dSBarry Smith Synopsis: 686aaa7dc30SBarry Smith #include <petscsys.h> 6871795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 688eca87e8dSBarry Smith 689eca87e8dSBarry Smith Not Collective 690eca87e8dSBarry Smith 691e28ce29aSPatrick Sanan Input Parameters: 692d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 693d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 694d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6951795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6961795a4d1SJed Brown 697e28ce29aSPatrick Sanan Output Parameters: 6981795a4d1SJed Brown + r1 - memory allocated in first chunk 6991795a4d1SJed Brown . r2 - memory allocated in second chunk 7001795a4d1SJed Brown . r3 - memory allocated in third chunk 7011795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7021795a4d1SJed Brown 7031795a4d1SJed Brown Level: developer 7041795a4d1SJed Brown 7051795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7061795a4d1SJed Brown 7071795a4d1SJed Brown M*/ 7082553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7091795a4d1SJed Brown 7101795a4d1SJed Brown /*MC 711dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 712d382aafbSBarry Smith 713d382aafbSBarry Smith Synopsis: 714aaa7dc30SBarry Smith #include <petscsys.h> 715dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 716d382aafbSBarry Smith 717d382aafbSBarry Smith Not Collective 718d382aafbSBarry Smith 719e28ce29aSPatrick Sanan Input Parameters: 720d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 721d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 722d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 723d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 724dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 725d382aafbSBarry Smith 726e28ce29aSPatrick Sanan Output Parameters: 727d382aafbSBarry Smith + r1 - memory allocated in first chunk 728d382aafbSBarry Smith . r2 - memory allocated in second chunk 729d382aafbSBarry Smith . r3 - memory allocated in third chunk 730d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 731d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 732d382aafbSBarry Smith 733d382aafbSBarry Smith Level: developer 734d382aafbSBarry Smith 7351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 736d382aafbSBarry Smith 737d382aafbSBarry Smith M*/ 7382553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 739d382aafbSBarry Smith 740d382aafbSBarry Smith /*MC 7411795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 742d382aafbSBarry Smith 743eca87e8dSBarry Smith Synopsis: 744aaa7dc30SBarry Smith #include <petscsys.h> 7451795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 746eca87e8dSBarry Smith 747eca87e8dSBarry Smith Not Collective 748eca87e8dSBarry Smith 749e28ce29aSPatrick Sanan Input Parameters: 750d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 751d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 752d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 753d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7541795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7551795a4d1SJed Brown 756e28ce29aSPatrick Sanan Output Parameters: 7571795a4d1SJed Brown + r1 - memory allocated in first chunk 7581795a4d1SJed Brown . r2 - memory allocated in second chunk 7591795a4d1SJed Brown . r3 - memory allocated in third chunk 7601795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7611795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7621795a4d1SJed Brown 7631795a4d1SJed Brown Level: developer 7641795a4d1SJed Brown 7651795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7661795a4d1SJed Brown 7671795a4d1SJed Brown M*/ 7682553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 769d382aafbSBarry Smith 770d382aafbSBarry Smith /*MC 771dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 772d382aafbSBarry Smith 773d382aafbSBarry Smith Synopsis: 774aaa7dc30SBarry Smith #include <petscsys.h> 775dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 776d382aafbSBarry Smith 777d382aafbSBarry Smith Not Collective 778d382aafbSBarry Smith 779e28ce29aSPatrick Sanan Input Parameters: 780d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 781d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 782d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 783d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 784d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 785dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 786d382aafbSBarry Smith 787e28ce29aSPatrick Sanan Output Parameteasr: 788d382aafbSBarry Smith + r1 - memory allocated in first chunk 789d382aafbSBarry Smith . r2 - memory allocated in second chunk 790d382aafbSBarry Smith . r3 - memory allocated in third chunk 791d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 792d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 793d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 794d382aafbSBarry Smith 795d382aafbSBarry Smith Level: developer 796d382aafbSBarry Smith 7971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 798d382aafbSBarry Smith 799d382aafbSBarry Smith M*/ 8002553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 801d382aafbSBarry Smith 802d382aafbSBarry Smith /*MC 8031795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 804d382aafbSBarry Smith 805eca87e8dSBarry Smith Synopsis: 806aaa7dc30SBarry Smith #include <petscsys.h> 8071795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 808eca87e8dSBarry Smith 809eca87e8dSBarry Smith Not Collective 810eca87e8dSBarry Smith 811e28ce29aSPatrick Sanan Input Parameters: 812d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 813d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 814d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 815d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 816d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 8171795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 8181795a4d1SJed Brown 819e28ce29aSPatrick Sanan Output Parameters: 8201795a4d1SJed Brown + r1 - memory allocated in first chunk 8211795a4d1SJed Brown . r2 - memory allocated in second chunk 8221795a4d1SJed Brown . r3 - memory allocated in third chunk 8231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8241795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8251795a4d1SJed Brown - r6 - memory allocated in sixth chunk 8261795a4d1SJed Brown 8271795a4d1SJed Brown Level: developer 8281795a4d1SJed Brown 8291795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8301795a4d1SJed Brown 8311795a4d1SJed Brown M*/ 8322553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 8331795a4d1SJed Brown 8341795a4d1SJed Brown /*MC 835dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 836d382aafbSBarry Smith 837d382aafbSBarry Smith Synopsis: 838aaa7dc30SBarry Smith #include <petscsys.h> 839dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 840d382aafbSBarry Smith 841d382aafbSBarry Smith Not Collective 842d382aafbSBarry Smith 843e28ce29aSPatrick Sanan Input Parameters: 844d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 845d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 846d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 847d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 848d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 849d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 850dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 851d382aafbSBarry Smith 852e28ce29aSPatrick Sanan Output Parameters: 853d382aafbSBarry Smith + r1 - memory allocated in first chunk 854d382aafbSBarry Smith . r2 - memory allocated in second chunk 855d382aafbSBarry Smith . r3 - memory allocated in third chunk 856d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 857d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 858d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 859eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 860d382aafbSBarry Smith 861d382aafbSBarry Smith Level: developer 862d382aafbSBarry Smith 8631795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 864d382aafbSBarry Smith 865d382aafbSBarry Smith M*/ 8662553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 867d382aafbSBarry Smith 868d382aafbSBarry Smith /*MC 8691795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8701795a4d1SJed Brown 8711795a4d1SJed Brown Synopsis: 872aaa7dc30SBarry Smith #include <petscsys.h> 8731795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8741795a4d1SJed Brown 8751795a4d1SJed Brown Not Collective 8761795a4d1SJed Brown 877e28ce29aSPatrick Sanan Input Parameters: 8781795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8791795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8801795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8811795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8821795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8831795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8841795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8851795a4d1SJed Brown 886e28ce29aSPatrick Sanan Output Parameters: 8871795a4d1SJed Brown + r1 - memory allocated in first chunk 8881795a4d1SJed Brown . r2 - memory allocated in second chunk 8891795a4d1SJed Brown . r3 - memory allocated in third chunk 8901795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8911795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8921795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8931795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8941795a4d1SJed Brown 8951795a4d1SJed Brown Level: developer 8961795a4d1SJed Brown 8971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 8981795a4d1SJed Brown 8991795a4d1SJed Brown M*/ 9002553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9011795a4d1SJed Brown 9021795a4d1SJed Brown /*MC 903503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 904d382aafbSBarry Smith 905eca87e8dSBarry Smith Synopsis: 906aaa7dc30SBarry Smith #include <petscsys.h> 907b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 908eca87e8dSBarry Smith 909eca87e8dSBarry Smith Not Collective 910eca87e8dSBarry Smith 911d382aafbSBarry Smith Output Parameter: 912b00a9115SJed Brown . result - memory allocated, sized to match pointer type 913d382aafbSBarry Smith 914d382aafbSBarry Smith Level: beginner 915d382aafbSBarry Smith 916390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 917d382aafbSBarry Smith 918d382aafbSBarry Smith M*/ 919b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 920ad0619ddSBarry Smith 921ad0619ddSBarry Smith /*MC 922b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 923ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 924ad0619ddSBarry Smith 925ad0619ddSBarry Smith Synopsis: 926aaa7dc30SBarry Smith #include <petscsys.h> 927b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 928ad0619ddSBarry Smith 929ad0619ddSBarry Smith Not Collective 930ad0619ddSBarry Smith 931ad0619ddSBarry Smith Input Parameter: 932b00a9115SJed Brown . obj - object memory is logged to 933ad0619ddSBarry Smith 934ad0619ddSBarry Smith Output Parameter: 935b00a9115SJed Brown . result - memory allocated, sized to match pointer type 936ad0619ddSBarry Smith 937ad0619ddSBarry Smith Level: developer 938ad0619ddSBarry Smith 939390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 940ad0619ddSBarry Smith 941ad0619ddSBarry Smith M*/ 942d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 943d382aafbSBarry Smith 944d382aafbSBarry Smith /*MC 945d382aafbSBarry Smith PetscFree - Frees memory 946d382aafbSBarry Smith 947eca87e8dSBarry Smith Synopsis: 948aaa7dc30SBarry Smith #include <petscsys.h> 949eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 950eca87e8dSBarry Smith 951eca87e8dSBarry Smith Not Collective 952eca87e8dSBarry Smith 953d382aafbSBarry Smith Input Parameter: 954390e1bf2SBarry Smith . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 955d382aafbSBarry Smith 956d382aafbSBarry Smith Level: beginner 957d382aafbSBarry Smith 95849d7da52SJed Brown Notes: 959390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 960390e1bf2SBarry Smith 96149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 962d382aafbSBarry Smith 963390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 964d382aafbSBarry Smith 965d382aafbSBarry Smith M*/ 96649d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 967d382aafbSBarry Smith 968d382aafbSBarry Smith /*MC 969d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 970d382aafbSBarry Smith 971eca87e8dSBarry Smith Synopsis: 972aaa7dc30SBarry Smith #include <petscsys.h> 973eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 974eca87e8dSBarry Smith 975eca87e8dSBarry Smith Not Collective 976eca87e8dSBarry Smith 977e28ce29aSPatrick Sanan Input Parameters: 978d382aafbSBarry Smith + memory1 - memory to free 979d382aafbSBarry Smith - memory2 - 2nd memory to free 980d382aafbSBarry Smith 981d382aafbSBarry Smith Level: developer 982d382aafbSBarry Smith 98395452b02SPatrick Sanan Notes: 98495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 985d382aafbSBarry Smith 986d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 987d382aafbSBarry Smith 988d382aafbSBarry Smith M*/ 989ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 992d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 993d382aafbSBarry Smith 994eca87e8dSBarry Smith Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 996eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 997eca87e8dSBarry Smith 998eca87e8dSBarry Smith Not Collective 999eca87e8dSBarry Smith 1000e28ce29aSPatrick Sanan Input Parameters: 1001d382aafbSBarry Smith + memory1 - memory to free 1002d382aafbSBarry Smith . memory2 - 2nd memory to free 1003d382aafbSBarry Smith - memory3 - 3rd memory to free 1004d382aafbSBarry Smith 1005d382aafbSBarry Smith Level: developer 1006d382aafbSBarry Smith 100795452b02SPatrick Sanan Notes: 100895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1011d382aafbSBarry Smith 1012d382aafbSBarry Smith M*/ 1013ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith /*MC 1016d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1017d382aafbSBarry Smith 1018eca87e8dSBarry Smith Synopsis: 1019aaa7dc30SBarry Smith #include <petscsys.h> 1020eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1021eca87e8dSBarry Smith 1022eca87e8dSBarry Smith Not Collective 1023eca87e8dSBarry Smith 1024e28ce29aSPatrick Sanan Input Parameters: 1025d382aafbSBarry Smith + m1 - memory to free 1026d382aafbSBarry Smith . m2 - 2nd memory to free 1027d382aafbSBarry Smith . m3 - 3rd memory to free 1028d382aafbSBarry Smith - m4 - 4th memory to free 1029d382aafbSBarry Smith 1030d382aafbSBarry Smith Level: developer 1031d382aafbSBarry Smith 103295452b02SPatrick Sanan Notes: 103395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1034d382aafbSBarry Smith 1035d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith M*/ 1038ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1039d382aafbSBarry Smith 1040d382aafbSBarry Smith /*MC 1041d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1042d382aafbSBarry Smith 1043eca87e8dSBarry Smith Synopsis: 1044aaa7dc30SBarry Smith #include <petscsys.h> 1045eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1046eca87e8dSBarry Smith 1047eca87e8dSBarry Smith Not Collective 1048eca87e8dSBarry Smith 1049e28ce29aSPatrick Sanan Input Parameters: 1050d382aafbSBarry Smith + m1 - memory to free 1051d382aafbSBarry Smith . m2 - 2nd memory to free 1052d382aafbSBarry Smith . m3 - 3rd memory to free 1053d382aafbSBarry Smith . m4 - 4th memory to free 1054d382aafbSBarry Smith - m5 - 5th memory to free 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith Level: developer 1057d382aafbSBarry Smith 105895452b02SPatrick Sanan Notes: 105995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1062d382aafbSBarry Smith 1063d382aafbSBarry Smith M*/ 1064ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1065d382aafbSBarry Smith 1066d382aafbSBarry Smith /*MC 1067d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1068d382aafbSBarry Smith 1069eca87e8dSBarry Smith Synopsis: 1070aaa7dc30SBarry Smith #include <petscsys.h> 1071eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1072eca87e8dSBarry Smith 1073eca87e8dSBarry Smith Not Collective 1074eca87e8dSBarry Smith 1075e28ce29aSPatrick Sanan Input Parameters: 1076d382aafbSBarry Smith + m1 - memory to free 1077d382aafbSBarry Smith . m2 - 2nd memory to free 1078d382aafbSBarry Smith . m3 - 3rd memory to free 1079d382aafbSBarry Smith . m4 - 4th memory to free 1080d382aafbSBarry Smith . m5 - 5th memory to free 1081d382aafbSBarry Smith - m6 - 6th memory to free 1082d382aafbSBarry Smith 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith Level: developer 1085d382aafbSBarry Smith 108695452b02SPatrick Sanan Notes: 108795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1088d382aafbSBarry Smith 1089d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1090d382aafbSBarry Smith 1091d382aafbSBarry Smith M*/ 1092ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith /*MC 1095d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1096d382aafbSBarry Smith 1097eca87e8dSBarry Smith Synopsis: 1098aaa7dc30SBarry Smith #include <petscsys.h> 1099eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1100eca87e8dSBarry Smith 1101eca87e8dSBarry Smith Not Collective 1102eca87e8dSBarry Smith 1103e28ce29aSPatrick Sanan Input Parameters: 1104d382aafbSBarry Smith + m1 - memory to free 1105d382aafbSBarry Smith . m2 - 2nd memory to free 1106d382aafbSBarry Smith . m3 - 3rd memory to free 1107d382aafbSBarry Smith . m4 - 4th memory to free 1108d382aafbSBarry Smith . m5 - 5th memory to free 1109d382aafbSBarry Smith . m6 - 6th memory to free 1110d382aafbSBarry Smith - m7 - 7th memory to free 1111d382aafbSBarry Smith 1112d382aafbSBarry Smith 1113d382aafbSBarry Smith Level: developer 1114d382aafbSBarry Smith 111595452b02SPatrick Sanan Notes: 111695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1117d382aafbSBarry Smith 1118d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1119d382aafbSBarry Smith PetscMalloc7() 1120d382aafbSBarry Smith 1121d382aafbSBarry Smith M*/ 1122ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1123d382aafbSBarry Smith 1124ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1125ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1126efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**); 1127efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 11283221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1129ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1130efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /* 1134c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1135c1706be6SHong Zhang */ 1136c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1137c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1138c1706be6SHong Zhang 1139a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 114036763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1141a5057860SBarry Smith 1142a5057860SBarry Smith /* 114366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1144d382aafbSBarry Smith */ 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1149e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1150e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 11520acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1153efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1155574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1157d382aafbSBarry Smith 11586a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11628e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1163d382aafbSBarry Smith 1164d382aafbSBarry Smith /* 1165d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1166d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1167d382aafbSBarry Smith functionality and/or error checking. 1168d382aafbSBarry Smith */ 1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1173d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1176014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1181a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11852f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 11902c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 119347340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11946fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 11956991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 11966991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1198d382aafbSBarry Smith 1199573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1200573b0fb4SBarry Smith 1201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1203014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 12048e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1205d382aafbSBarry Smith 1206a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1207a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1208a53986e1SJed Brown 1209d382aafbSBarry Smith /* 1210d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1211d382aafbSBarry Smith */ 1212367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1213570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1214014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 12152414b3c7SJed Brown #else 12162414b3c7SJed Brown #define MPIU_SUM MPI_SUM 12172414b3c7SJed Brown #endif 1218570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1219014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1220014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1221d9822059SBarry Smith #else 1222d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1223d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1224d9822059SBarry Smith #endif 1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1226d382aafbSBarry Smith 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1229eb3f98d2SBarry Smith 123095c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1231d6a4318aSJed Brown 1232639ff905SBarry Smith /* 1233639ff905SBarry Smith Defines PETSc error handling. 1234639ff905SBarry Smith */ 1235639ff905SBarry Smith #include <petscerror.h> 1236d382aafbSBarry Smith 12370700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1238014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1239014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1241d382aafbSBarry Smith 1242d382aafbSBarry Smith /* 1243d382aafbSBarry Smith Routines that get memory usage information from the OS 1244d382aafbSBarry Smith */ 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1248b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1249d382aafbSBarry Smith 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1252d382aafbSBarry Smith 1253d382aafbSBarry Smith /* 1254d382aafbSBarry Smith Initialization of PETSc 1255d382aafbSBarry Smith */ 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1266d382aafbSBarry Smith 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1268607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1269d382aafbSBarry Smith 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith /* 1276d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12772981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1278d382aafbSBarry Smith */ 1279638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1280638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1281638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1282d382aafbSBarry Smith 1283d382aafbSBarry Smith /* 1284d382aafbSBarry Smith Functions that can act on any PETSc object. 1285d382aafbSBarry Smith */ 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1304bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1305bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13080eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13090eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1311d382aafbSBarry Smith 1312665c2dedSJed Brown #include <petscviewertypes.h> 1313639ff905SBarry Smith #include <petscoptions.h> 1314639ff905SBarry Smith 13150633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 13160633abcbSJed Brown 1317639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1318c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1319dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1320639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 13210005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 13220005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1330685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13334099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1336014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1337d382aafbSBarry Smith 1338e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13397aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1340e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1341e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1342e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1343e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1344e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1345e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1346e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1347e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1348e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 134915681b3cSBarry Smith 1350ec7429eaSBarry Smith #else 13517aab2a10SBarry Smith #define PetscSAWsBlock() 0 1352e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1353e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1354e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1355e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1356e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1357e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1358e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1359e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1360e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 136115681b3cSBarry Smith 1362ec7429eaSBarry Smith #endif 1363b90c6cbeSBarry Smith 136482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 136582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 136682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 13677d5d4d99SBarry Smith 13685fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1369a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13705fe58b6fSBarry Smith #endif 13717eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1372a64a8e02SBarry Smith 1373140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1374140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1375140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1376140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1377140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1378140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1379d382aafbSBarry Smith 1380d382aafbSBarry Smith /* 1381503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1382d382aafbSBarry Smith link libraries that will be loaded as needed. 1383d382aafbSBarry Smith */ 1384a240a19fSJed Brown 1385a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1386a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1387140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 13881c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 13891c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1390140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]); 1391140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1392140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1393140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1394d382aafbSBarry Smith 1395014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1403d382aafbSBarry Smith 1404d382aafbSBarry Smith /* 1405d382aafbSBarry Smith Useful utility routines 1406d382aafbSBarry Smith */ 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 14136ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 14146ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1415d382aafbSBarry Smith 141664ac3b0dSPatrick Sanan /*MC 1417ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1418503cfb0cSBarry Smith 1419e28ce29aSPatrick Sanan Notes: 1420e28ce29aSPatrick Sanan This is useful in cases like 1421503cfb0cSBarry Smith $ int *a; 1422ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14231cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 142464ac3b0dSPatrick Sanan 142564ac3b0dSPatrick Sanan Level: beginner 142664ac3b0dSPatrick Sanan 142764ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 142864ac3b0dSPatrick Sanan M*/ 1429d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1430503cfb0cSBarry Smith 1431d382aafbSBarry Smith /*MC 1432d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1433d382aafbSBarry Smith 1434d382aafbSBarry Smith Synopsis: 1435aaa7dc30SBarry Smith #include <petscsys.h> 1436d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1437d382aafbSBarry Smith 1438eca87e8dSBarry Smith Not Collective 1439eca87e8dSBarry Smith 1440d382aafbSBarry Smith Input Parameters: 1441d382aafbSBarry Smith . format - the usual printf() format string 1442d382aafbSBarry Smith 1443d382aafbSBarry Smith Level: developer 1444d382aafbSBarry Smith 1445d382aafbSBarry Smith Fortran Note: 1446d382aafbSBarry Smith This routine is not supported in Fortran. 1447d382aafbSBarry Smith 1448d382aafbSBarry Smith 1449d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1450d382aafbSBarry Smith M*/ 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1452d382aafbSBarry Smith 1453fcfd50ebSBarry Smith /* 1454fcfd50ebSBarry Smith Defines PETSc profiling. 1455fcfd50ebSBarry Smith */ 14562c8e378dSBarry Smith #include <petsclog.h> 1457fcfd50ebSBarry Smith 1458fcfd50ebSBarry Smith /* 1459fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1460fcfd50ebSBarry Smith */ 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 14681b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1469fcfd50ebSBarry Smith 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1473d382aafbSBarry Smith 1474d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1475d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1476d781fa04SBarry Smith 1477d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1479016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 148074ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1481d382aafbSBarry Smith #endif 1482d382aafbSBarry Smith 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 14850ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1490d382aafbSBarry Smith 1491014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1497b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1498d382aafbSBarry Smith 1499d382aafbSBarry Smith /* 1500d382aafbSBarry Smith For use in debuggers 1501d382aafbSBarry Smith */ 1502014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1503014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1507d382aafbSBarry Smith 1508a663daf8SBarry Smith #include <stddef.h> 1509a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1510d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1511d382aafbSBarry Smith #include <stdlib.h> 1512d382aafbSBarry Smith #endif 15136c7e564aSBarry Smith 15144a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1515d382aafbSBarry Smith #include <xmmintrin.h> 1516d382aafbSBarry Smith #endif 1517d382aafbSBarry Smith 1518d382aafbSBarry Smith /*@C 1519d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1520d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1521d382aafbSBarry Smith PetscMemmove() in that case. 1522d382aafbSBarry Smith 1523d382aafbSBarry Smith Not Collective 1524d382aafbSBarry Smith 1525d382aafbSBarry Smith Input Parameters: 1526d382aafbSBarry Smith + b - pointer to initial memory space 1527d382aafbSBarry Smith - n - length (in bytes) of space to copy 1528d382aafbSBarry Smith 1529d382aafbSBarry Smith Output Parameter: 1530d382aafbSBarry Smith . a - pointer to copy space 1531d382aafbSBarry Smith 1532d382aafbSBarry Smith Level: intermediate 1533d382aafbSBarry Smith 1534d382aafbSBarry Smith Compile Option: 1535d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1536d382aafbSBarry Smith for memory copies on double precision values. 1537d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1538d382aafbSBarry Smith for memory copies on double precision values. 1539d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1540d382aafbSBarry Smith for memory copies on double precision values. 1541d382aafbSBarry Smith 1542d382aafbSBarry Smith Note: 1543d382aafbSBarry Smith This routine is analogous to memcpy(). 1544d382aafbSBarry Smith 15451fd49c25SBarry Smith Not available from Fortran 15461fd49c25SBarry Smith 1547f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1548f5f57ec0SBarry Smith 1549d382aafbSBarry Smith 15501fd49c25SBarry Smith .seealso: PetscMemmove(), PetscStrallocpy() 1551d382aafbSBarry Smith 1552d382aafbSBarry Smith @*/ 15537087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1554d382aafbSBarry Smith { 1555d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1556c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1557c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1558a7e36092SMatthew G Knepley PetscFunctionBegin; 1559e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1560e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1561a7e36092SMatthew G Knepley #else 1562d382aafbSBarry Smith PetscFunctionBegin; 1563a7e36092SMatthew G Knepley #endif 1564a47a537aSLisandro Dalcin if (a != b && n > 0) { 1565d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1566e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1567d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1568d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1569d382aafbSBarry Smith #endif 1570d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1571c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1572d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1573d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1574c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1575c5df96a5SBarry Smith PetscErrorCode ierr; 1576c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 15778b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1578d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1579d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1580d382aafbSBarry Smith #else 1581d382aafbSBarry Smith size_t i; 1582d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1583d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1584d382aafbSBarry Smith #endif 1585d382aafbSBarry Smith } else { 1586d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1587d382aafbSBarry Smith } 1588d382aafbSBarry Smith #else 1589d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1590d382aafbSBarry Smith #endif 1591d382aafbSBarry Smith } 1592d382aafbSBarry Smith PetscFunctionReturn(0); 1593d382aafbSBarry Smith } 1594d382aafbSBarry Smith 1595d382aafbSBarry Smith /*@C 1596d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1597d382aafbSBarry Smith 1598d382aafbSBarry Smith Not Collective 1599d382aafbSBarry Smith 1600d382aafbSBarry Smith Input Parameters: 1601d382aafbSBarry Smith + a - pointer to beginning memory location 1602d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1603d382aafbSBarry Smith 1604d382aafbSBarry Smith Level: intermediate 1605d382aafbSBarry Smith 1606d382aafbSBarry Smith Compile Option: 1607d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1608d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1609d382aafbSBarry Smith 16101fd49c25SBarry Smith Not available from Fortran 16111fd49c25SBarry Smith 1612503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1613503cfb0cSBarry Smith 1614d382aafbSBarry Smith 1615d382aafbSBarry Smith .seealso: PetscMemcpy() 1616d382aafbSBarry Smith @*/ 16177087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1618d382aafbSBarry Smith { 1619d382aafbSBarry Smith if (n > 0) { 1620d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1621e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1622d382aafbSBarry Smith #endif 1623d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1624d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1625d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1626d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1627d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1628d382aafbSBarry Smith } else { 1629d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1630d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1631d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1632d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1633d382aafbSBarry Smith } else { 1634d382aafbSBarry Smith #endif 1635d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1636d382aafbSBarry Smith bzero((char *)a,n); 1637d382aafbSBarry Smith #else 1638d382aafbSBarry Smith memset((char*)a,0,n); 1639d382aafbSBarry Smith #endif 1640d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1641d382aafbSBarry Smith } 1642d382aafbSBarry Smith #endif 1643d382aafbSBarry Smith } 1644d382aafbSBarry Smith return 0; 1645d382aafbSBarry Smith } 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith /*MC 1648d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1649d382aafbSBarry Smith 1650eca87e8dSBarry Smith Synopsis: 1651aaa7dc30SBarry Smith #include <petscsys.h> 1652eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1653eca87e8dSBarry Smith 1654d382aafbSBarry Smith Not Collective 1655d382aafbSBarry Smith 1656d382aafbSBarry Smith Input Parameters: 1657d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1658d382aafbSBarry Smith . n - number of elements to fetch 1659d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 166050d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1661d382aafbSBarry Smith 1662d382aafbSBarry Smith Level: developer 1663d382aafbSBarry Smith 1664d382aafbSBarry Smith Notes: 1665d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1666d382aafbSBarry Smith 166750d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 166850d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 166950d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 167063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 167163cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 167263cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1673d382aafbSBarry Smith 1674d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1675d382aafbSBarry Smith address). 1676d382aafbSBarry Smith 1677d382aafbSBarry Smith M*/ 1678d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1679d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1680d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1681d382aafbSBarry Smith } while (0) 1682d382aafbSBarry Smith 1683d382aafbSBarry Smith /* 1684d382aafbSBarry Smith Determine if some of the kernel computation routines use 1685d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1686d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1687d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1688e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1689d382aafbSBarry Smith */ 1690d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1691d382aafbSBarry Smith 1692d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1693d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1694d382aafbSBarry Smith #endif 1695d382aafbSBarry Smith 16965a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 16975a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1698d382aafbSBarry Smith #endif 1699d382aafbSBarry Smith 1700d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1701d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1702d382aafbSBarry Smith #endif 1703d382aafbSBarry Smith 1704d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1705d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1706d382aafbSBarry Smith #endif 1707d382aafbSBarry Smith 1708d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1709d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1710d382aafbSBarry Smith #endif 1711d382aafbSBarry Smith 1712d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1713d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1714d382aafbSBarry Smith #endif 1715d382aafbSBarry Smith 1716d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1717d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1718d382aafbSBarry Smith #endif 1719d382aafbSBarry Smith 1720d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1721d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1722d382aafbSBarry Smith #endif 1723d382aafbSBarry Smith 1724d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1725d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1726d382aafbSBarry Smith #endif 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1729d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1730d382aafbSBarry Smith #endif 1731d382aafbSBarry Smith 1732d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1733d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1734d382aafbSBarry Smith #endif 1735d382aafbSBarry Smith 1736d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1737d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1738d382aafbSBarry Smith #endif 1739d382aafbSBarry Smith 1740d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1741d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1742d382aafbSBarry Smith #endif 1743d382aafbSBarry Smith 1744d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1745d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1746d382aafbSBarry Smith #endif 1747d382aafbSBarry Smith 1748d382aafbSBarry Smith #endif 1749d382aafbSBarry Smith 1750d382aafbSBarry Smith /* 1751d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1752d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1753d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1754d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1755d382aafbSBarry Smith ugly extern "C" {} wrappers. 1756d382aafbSBarry Smith */ 1757d382aafbSBarry Smith #if defined(__cplusplus) 1758d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1759d382aafbSBarry Smith # define EXTERN_C_END } 1760d382aafbSBarry Smith #else 1761d382aafbSBarry Smith # define EXTERN_C_BEGIN 1762d382aafbSBarry Smith # define EXTERN_C_END 1763d382aafbSBarry Smith #endif 1764d382aafbSBarry Smith 1765d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1766d382aafbSBarry Smith 1767d382aafbSBarry Smith /*MC 1768d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1769d382aafbSBarry Smith communication 1770d382aafbSBarry Smith 1771d382aafbSBarry Smith Level: beginner 1772d382aafbSBarry Smith 1773d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1774d382aafbSBarry Smith 1775d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1776d382aafbSBarry Smith M*/ 1777d382aafbSBarry Smith 1778d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1779014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1780014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1781d382aafbSBarry Smith #endif 1782d382aafbSBarry Smith 1783d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1784d382aafbSBarry Smith 1785d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1786d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1787d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1788d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1789d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1790d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1791d382aafbSBarry Smith 179261b0d812SBarry Smith /*@C 179361b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 179461b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 179561b0d812SBarry Smith 179661b0d812SBarry Smith Not Collective 179761b0d812SBarry Smith 179861b0d812SBarry Smith Input Parameter: 179961b0d812SBarry Smith . a - the PetscInt value 180061b0d812SBarry Smith 180161b0d812SBarry Smith Output Parameter: 180261b0d812SBarry Smith . b - the resulting PetscBLASInt value 180361b0d812SBarry Smith 180461b0d812SBarry Smith Level: advanced 180561b0d812SBarry Smith 18061fd49c25SBarry Smith Not available from Fortran 18071fd49c25SBarry Smith 180861b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 180961b0d812SBarry Smith @*/ 1810c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 1811c5df96a5SBarry Smith { 1812c5df96a5SBarry Smith PetscFunctionBegin; 1813ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 1814c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 1815c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 1816c5df96a5SBarry Smith #endif 1817c5df96a5SBarry Smith PetscFunctionReturn(0); 1818c5df96a5SBarry Smith } 1819c5df96a5SBarry Smith 182061b0d812SBarry Smith /*@C 182161b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 182261b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 182361b0d812SBarry Smith 182461b0d812SBarry Smith Not Collective 182561b0d812SBarry Smith 182661b0d812SBarry Smith Input Parameter: 182761b0d812SBarry Smith . a - the PetscInt value 182861b0d812SBarry Smith 182961b0d812SBarry Smith Output Parameter: 183061b0d812SBarry Smith . b - the resulting PetscMPIInt value 183161b0d812SBarry Smith 183261b0d812SBarry Smith Level: advanced 183361b0d812SBarry Smith 18341fd49c25SBarry Smith Not available from Fortran 18351fd49c25SBarry Smith 183661b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 183761b0d812SBarry Smith @*/ 18384dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 18394dc2109aSBarry Smith { 18404dc2109aSBarry Smith PetscFunctionBegin; 1841ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 18424dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 18434dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 18444dc2109aSBarry Smith #endif 18454dc2109aSBarry Smith PetscFunctionReturn(0); 18464dc2109aSBarry Smith } 18474dc2109aSBarry Smith 1848bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 18492f18eb33SBarry Smith 18502f18eb33SBarry Smith /*@C 18512f18eb33SBarry Smith 18522f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 18532f18eb33SBarry Smith 18542f18eb33SBarry Smith Not Collective 18552f18eb33SBarry Smith 18562f18eb33SBarry Smith Input Parameter: 18572f18eb33SBarry Smith + a - the PetscReal value 18582f18eb33SBarry Smith - b - the second value 18592f18eb33SBarry Smith 1860390e1bf2SBarry Smith Returns: 1861390e1bf2SBarry Smith the result as a PetscInt value 18622f18eb33SBarry Smith 1863bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 18642f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 18652f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 18662f18eb33SBarry Smith 1867e28ce29aSPatrick Sanan Developers Note: 1868e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 18692f18eb33SBarry Smith 18702f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 18712f18eb33SBarry Smith 18721fd49c25SBarry Smith Not available from Fortran 18731fd49c25SBarry Smith 18742f18eb33SBarry Smith Level: advanced 18752f18eb33SBarry Smith 1876390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 18772f18eb33SBarry Smith @*/ 18782f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 18792f18eb33SBarry Smith { 1880bafee8b4SSatish Balay PetscInt64 r; 18812f18eb33SBarry Smith 1882bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 18832f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 18842f18eb33SBarry Smith return (PetscInt) r; 18852f18eb33SBarry Smith } 18862f18eb33SBarry Smith 18872f18eb33SBarry Smith /*@C 18882f18eb33SBarry Smith 18892f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 18902f18eb33SBarry Smith 18912f18eb33SBarry Smith Not Collective 18922f18eb33SBarry Smith 18932f18eb33SBarry Smith Input Parameter: 18942f18eb33SBarry Smith + a - the PetscInt value 18952f18eb33SBarry Smith - b - the second value 18962f18eb33SBarry Smith 1897390e1bf2SBarry Smith Returns: 1898390e1bf2SBarry Smith the result as a PetscInt value 18992f18eb33SBarry Smith 1900bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 19012f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 19022f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 19032f18eb33SBarry Smith 19041fd49c25SBarry Smith Not available from Fortran 19051fd49c25SBarry Smith 19062f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 19072f18eb33SBarry Smith 19082f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 19092f18eb33SBarry Smith 19102f18eb33SBarry Smith Level: advanced 19112f18eb33SBarry Smith 1912390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 19132f18eb33SBarry Smith @*/ 19142f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 19152f18eb33SBarry Smith { 1916bafee8b4SSatish Balay PetscInt64 r; 19172f18eb33SBarry Smith 1918bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 19192f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 19202f18eb33SBarry Smith return (PetscInt) r; 19212f18eb33SBarry Smith } 19222f18eb33SBarry Smith 1923f91af8c7SBarry Smith /*@C 1924f91af8c7SBarry Smith 1925f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 1926f91af8c7SBarry Smith 1927f91af8c7SBarry Smith Not Collective 1928f91af8c7SBarry Smith 1929f91af8c7SBarry Smith Input Parameter: 1930f91af8c7SBarry Smith + a - the PetscInt value 1931f91af8c7SBarry Smith - b - the second value 1932f91af8c7SBarry Smith 1933390e1bf2SBarry Smith Returns: 1934390e1bf2SBarry Smith the result as a PetscInt value 1935f91af8c7SBarry Smith 1936bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 1937f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 1938f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 1939f91af8c7SBarry Smith 1940f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 1941f91af8c7SBarry Smith 1942f5f57ec0SBarry Smith Not available from Fortran 1943f5f57ec0SBarry Smith 1944f91af8c7SBarry Smith Level: advanced 1945f91af8c7SBarry Smith 1946390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 1947f91af8c7SBarry Smith @*/ 1948f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 1949f91af8c7SBarry Smith { 1950bafee8b4SSatish Balay PetscInt64 r; 1951f91af8c7SBarry Smith 1952bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 1953f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 1954f91af8c7SBarry Smith return (PetscInt) r; 1955f91af8c7SBarry Smith } 1956f91af8c7SBarry Smith 19572f18eb33SBarry Smith /*@C 19582f18eb33SBarry Smith 19592f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 19602f18eb33SBarry Smith 19612f18eb33SBarry Smith Not Collective 19622f18eb33SBarry Smith 19632f18eb33SBarry Smith Input Parameter: 19642f18eb33SBarry Smith + a - the PetscInt value 19652f18eb33SBarry Smith - b - the second value 19662f18eb33SBarry Smith 19672f18eb33SBarry Smith Output Parameter:ma 1968390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 19692f18eb33SBarry Smith 1970bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 19712f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 19722f18eb33SBarry Smith 1973f5f57ec0SBarry Smith Not available from Fortran 1974f5f57ec0SBarry Smith 1975220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 19762f18eb33SBarry Smith 19772f18eb33SBarry Smith Level: advanced 19782f18eb33SBarry Smith 1979220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 19802f18eb33SBarry Smith @*/ 19812f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 19822f18eb33SBarry Smith { 1983bafee8b4SSatish Balay PetscInt64 r; 19842f18eb33SBarry Smith 19852f18eb33SBarry Smith PetscFunctionBegin; 1986bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 19872f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19882f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 19892f18eb33SBarry Smith #endif 1990f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 1991f91af8c7SBarry Smith PetscFunctionReturn(0); 1992f91af8c7SBarry Smith } 1993f91af8c7SBarry Smith 1994f91af8c7SBarry Smith /*@C 1995f91af8c7SBarry Smith 1996fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 1997f91af8c7SBarry Smith 1998f91af8c7SBarry Smith Not Collective 1999f91af8c7SBarry Smith 2000f91af8c7SBarry Smith Input Parameter: 2001f91af8c7SBarry Smith + a - the PetscInt value 2002f91af8c7SBarry Smith - b - the second value 2003f91af8c7SBarry Smith 2004f91af8c7SBarry Smith Output Parameter:ma 2005390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2006f91af8c7SBarry Smith 2007bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2008f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2009f91af8c7SBarry Smith 2010f5f57ec0SBarry Smith Not available from Fortran 2011f5f57ec0SBarry Smith 2012f91af8c7SBarry Smith Level: advanced 2013f91af8c7SBarry Smith 2014390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2015f91af8c7SBarry Smith @*/ 2016f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2017f91af8c7SBarry Smith { 2018bafee8b4SSatish Balay PetscInt64 r; 2019f91af8c7SBarry Smith 2020f91af8c7SBarry Smith PetscFunctionBegin; 2021bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2022f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2023f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2024f91af8c7SBarry Smith #endif 2025f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 20262f18eb33SBarry Smith PetscFunctionReturn(0); 20272f18eb33SBarry Smith } 2028c5df96a5SBarry Smith 2029d382aafbSBarry Smith /* 20302981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2031d382aafbSBarry Smith */ 2032d382aafbSBarry Smith #if defined(hz) 2033d382aafbSBarry Smith # undef hz 2034d382aafbSBarry Smith #endif 2035d382aafbSBarry Smith 203615a5570dSLisandro Dalcin #include <limits.h> 203715a5570dSLisandro Dalcin 203815a5570dSLisandro Dalcin /* The number of bits in a byte */ 203915a5570dSLisandro Dalcin 204015a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 204115a5570dSLisandro Dalcin 2042d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2043d382aafbSBarry Smith 2044d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2045d382aafbSBarry Smith # include <sys/param.h> 2046d382aafbSBarry Smith #endif 2047d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2048d382aafbSBarry Smith # include <sys/types.h> 2049d382aafbSBarry Smith #endif 2050d382aafbSBarry Smith #if defined(MAXPATHLEN) 2051d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2052d382aafbSBarry Smith #elif defined(MAX_PATH) 2053d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2054d382aafbSBarry Smith #elif defined(_MAX_PATH) 2055d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2056d382aafbSBarry Smith #else 2057d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2058d382aafbSBarry Smith #endif 2059d382aafbSBarry Smith 2060d382aafbSBarry Smith /*MC 2061d382aafbSBarry Smith 206266d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 206366d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 206466d79e26SBarry Smith 206566d79e26SBarry Smith 206666d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 206766d79e26SBarry Smith 206866d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 206966d79e26SBarry Smith 207066d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 207166d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 207266d79e26SBarry Smith 207366d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 207466d79e26SBarry Smith 207566d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 207666d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 207766d79e26SBarry Smith version number (x.y.z). 207866d79e26SBarry Smith 207966d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 208066d79e26SBarry Smith 208166d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 208266d79e26SBarry Smith 208366d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 208466d79e26SBarry Smith 208566d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 208666d79e26SBarry Smith 208766d79e26SBarry Smith Level: intermediate 208866d79e26SBarry Smith 208966d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 209066d79e26SBarry Smith 209166d79e26SBarry Smith M*/ 209266d79e26SBarry Smith 209366d79e26SBarry Smith /*MC 209466d79e26SBarry Smith 20951b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 20961b266c99SBarry Smith of every function and module definition you need something like 2097d382aafbSBarry Smith 2098d382aafbSBarry Smith $ 2099af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 21000f665fc7SPatrick Sanan $ use petscXXX 21011b266c99SBarry Smith 2102692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 21031b266c99SBarry Smith 2104d382aafbSBarry Smith $ XXX variablename 21051b266c99SBarry Smith $ type(tXXX) variablename 21061b266c99SBarry Smith 2107692afcd8SPatrick Sanan For example, 21081b266c99SBarry Smith 2109bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 21101b266c99SBarry Smith $ use petscvec 2111d382aafbSBarry Smith $ 2112692afcd8SPatrick Sanan $ Vec b 2113692afcd8SPatrick Sanan $ type(tVec) x 2114d382aafbSBarry Smith 2115d382aafbSBarry Smith Level: beginner 2116d382aafbSBarry Smith 2117d382aafbSBarry Smith M*/ 2118d382aafbSBarry Smith 2119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2120014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2124014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 212527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 21265f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2127d382aafbSBarry Smith 2128014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 212922ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 213160e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2132d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 21366c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 213717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 213817d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 21405569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 214217df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 214439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2146745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 214739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 21516c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 21526c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2153e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2154d382aafbSBarry Smith 2155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2157d382aafbSBarry Smith 215876bdecfbSBarry Smith /*J 2159d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2160d382aafbSBarry Smith 2161d382aafbSBarry Smith Level: beginner 2162d382aafbSBarry Smith 2163e28ce29aSPatrick Sanan Notes: 2164e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 216525ccb61fSToby Isaac with the option --download-sprng or --download-random123 2166d382aafbSBarry Smith 21678f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 216876bdecfbSBarry Smith J*/ 216919fd82e9SBarry Smith typedef const char* PetscRandomType; 2170d382aafbSBarry Smith #define PETSCRAND "rand" 2171d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2172d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2173c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 217425ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2175d382aafbSBarry Smith 2176d382aafbSBarry Smith /* Logging support */ 2177014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2178d382aafbSBarry Smith 2179607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2180d382aafbSBarry Smith 2181d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2182140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2183d382aafbSBarry Smith 2184bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 218519fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 218719fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2188685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2190d382aafbSBarry Smith 2191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2200d382aafbSBarry Smith 2201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2203014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2204014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2205014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 220897540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 22098a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 221097540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2211d382aafbSBarry Smith 221230815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 221330815ce0SLisandro Dalcin 22149860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 22159860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 22179860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2219014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2220014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2225c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2226e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2227c891a504SStefano Zampini #endif 2228d382aafbSBarry Smith 2229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2232d382aafbSBarry Smith 2233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2234014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2235014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2239d382aafbSBarry Smith 2240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2245cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2246cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2247d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2248d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2249d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2250d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 22516afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 22526afbe7ddSJed Brown MPI_Request**,MPI_Request**, 22536afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 22546afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 22556afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2256d382aafbSBarry Smith 22576145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 22586145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 22596145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 22606145cd65SJed Brown 2261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2262d382aafbSBarry Smith 2263ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2264ce94432eSBarry Smith 226545487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 226645487dadSJed Brown 2267d382aafbSBarry Smith struct _n_PetscSubcomm { 2268d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2269d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2270306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 227145487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 227245487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2273708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 227445487dadSJed Brown PetscSubcommType type; 2275e5acf8a4SHong Zhang char *subcommprefix; 2276d382aafbSBarry Smith }; 2277d382aafbSBarry Smith 2278c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2279306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 228036be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 228565d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2286053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2287f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2288e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2289d382aafbSBarry Smith 22909962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 22919962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 22929962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 22939962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 22949962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 22959962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 22969962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 22979962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 22989962606eSBarry Smith 22995e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 23005f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 23015f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 23025f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 23035f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 23045e71baefSBarry Smith 2305a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2306a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2307a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2308a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2309a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2310a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2311a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2312a32e93adSJunchao Zhang 231313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 23140f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 231513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2316137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2317137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2318137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 231913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 232013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 23210f453b92SJed Brown 23225e71baefSBarry Smith 2323471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2324471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2325471ecdacSJed Brown * possible. */ 232635005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2327d382aafbSBarry Smith 23289de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 23299de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 23309de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 23319de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 23329de0f6ecSBarry Smith 2333ace2fbaeSBarry Smith #include <stdarg.h> 2334ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2335ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2336ace2fbaeSBarry Smith 2337268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2338fbfcfee5SBarry Smith 23391f817a21SBarry Smith /*@C 23401f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 23411f817a21SBarry Smith 23421f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 23431f817a21SBarry Smith 23441f817a21SBarry Smith Input Parameters: 23451f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 23461f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 23471f817a21SBarry Smith 2348850545d0SSatish Balay Level: intermediate 2349850545d0SSatish Balay 2350f5f57ec0SBarry Smith Not available from Fortran 2351f5f57ec0SBarry Smith 23521f817a21SBarry Smith Options Database: 2353063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 23541f817a21SBarry Smith @*/ 2355dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2356dff31646SBarry Smith { 2357dff31646SBarry Smith size_t len; 2358dff31646SBarry Smith char *vstring; 2359dff31646SBarry Smith PetscErrorCode ierr; 2360dff31646SBarry Smith 23611f817a21SBarry Smith PetscFunctionBegin; 23628d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2363dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 236435005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2365dff31646SBarry Smith ierr = PetscMemcpy(vstring,cit,len);CHKERRQ(ierr); 2366dff31646SBarry Smith if (set) *set = PETSC_TRUE; 23671f817a21SBarry Smith PetscFunctionReturn(0); 2368dff31646SBarry Smith } 2369dff31646SBarry Smith 2370b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2371fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2372fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2373f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2374fe278a28SBarry Smith 2375f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2376f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2377b967cddfSBarry Smith 23789f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 23799f4d3c52SBarry Smith 238004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2381763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2382dff31646SBarry Smith 238368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 23845dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2385d382aafbSBarry Smith 2386b2566f29SBarry Smith 2387b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2388b2566f29SBarry Smith /* 2389b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2390b2566f29SBarry Smith */ 23918f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 239277a5e07dSBarry Smith 239377a5e07dSBarry Smith /*MC 239477a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 239577a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 239677a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 239777a5e07dSBarry Smith 2398*d083f849SBarry Smith Collective 239977a5e07dSBarry Smith 240077a5e07dSBarry Smith Synopsis: 240177a5e07dSBarry Smith #include <petscsys.h> 240277a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 240377a5e07dSBarry Smith 240477a5e07dSBarry Smith Input Parameters: 240577a5e07dSBarry Smith + indata - pointer to the input data to be reduced 240677a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 240777a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 240877a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 240977a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 241077a5e07dSBarry Smith 241177a5e07dSBarry Smith Output Parameter: 241277a5e07dSBarry Smith . outdata - the reduced values 241377a5e07dSBarry Smith 2414e28ce29aSPatrick Sanan Notes: 2415e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 241677a5e07dSBarry Smith 241777a5e07dSBarry Smith Level: developer 241877a5e07dSBarry Smith 241977a5e07dSBarry Smith .seealso: MPI_Allreduce() 242077a5e07dSBarry Smith M*/ 2421fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2422b2566f29SBarry Smith #else 2423b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2424b2566f29SBarry Smith #endif 2425b2566f29SBarry Smith 24266f7079ddSSatish Balay #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 24278198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 24288198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 24292f065d89SBarry Smith #endif 24308198064fSBarry Smith 243112801b39SBarry Smith /* 243212801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 243312801b39SBarry Smith */ 24348ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 24358ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 243612801b39SBarry Smith 2437d382aafbSBarry Smith #endif 2438