xref: /petsc/include/petscsys.h (revision d7aa01a84ba4076bd64b3daf011b0beee9eee36c)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
1673fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1773fca5a0SBarry Smith /*
1873fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
1973fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2073fca5a0SBarry Smith */
2173fca5a0SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L)
2273fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2373fca5a0SBarry Smith #endif
2473fca5a0SBarry Smith #if defined(PETSC__BSD_SOURCE)
2573fca5a0SBarry Smith #define _BSD_SOURCE
2673fca5a0SBarry Smith #endif
2773fca5a0SBarry Smith #endif
2873fca5a0SBarry Smith 
29d382aafbSBarry Smith /* ========================================================================== */
30d382aafbSBarry Smith /*
31d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
32e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
33d382aafbSBarry Smith */
34d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
35d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
36d382aafbSBarry Smith #endif
371ec50b02SJed Brown 
381ec50b02SJed Brown #if defined(__cplusplus)
391ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
401ec50b02SJed Brown #else
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
421ec50b02SJed Brown #endif
43d382aafbSBarry Smith 
44d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
45d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
46d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
47d382aafbSBarry Smith #else
48d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
49d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
50d382aafbSBarry Smith #endif
51d382aafbSBarry Smith /* ========================================================================== */
52d382aafbSBarry Smith /*
53d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
54d382aafbSBarry Smith     Web page
55d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
56d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
57d382aafbSBarry Smith     src/docs/website/index.html.
58d382aafbSBarry Smith */
59d382aafbSBarry Smith #include "petscversion.h"
60301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
61d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
62301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
63d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
64301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
65d382aafbSBarry Smith #else
66301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
67301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
68d382aafbSBarry Smith #endif
69d382aafbSBarry Smith 
70d382aafbSBarry Smith /*MC
71d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
72d382aafbSBarry Smith 
73d382aafbSBarry Smith     Input Parameter:
74d382aafbSBarry Smith .   len - length of the string
75d382aafbSBarry Smith 
76d382aafbSBarry Smith     Output Parameter:
77d382aafbSBarry Smith .   version - version string
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Level: developer
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     Usage:
82d382aafbSBarry Smith     char version[256];
83d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
84d382aafbSBarry Smith 
85d382aafbSBarry Smith     Fortran Note:
86d382aafbSBarry Smith     This routine is not supported in Fortran.
87d382aafbSBarry Smith 
88d382aafbSBarry Smith .seealso: PetscGetProgramName()
89d382aafbSBarry Smith 
90d382aafbSBarry Smith M*/
91d382aafbSBarry Smith 
92d382aafbSBarry Smith /* ========================================================================== */
93d382aafbSBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
96d382aafbSBarry Smith 
97d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
98d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
99d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
100d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
101d382aafbSBarry Smith     mpicxx.h directly in their code
102d382aafbSBarry Smith */
103d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
104d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
105d382aafbSBarry Smith #include "mpi.h"
10665013866SBarry Smith 
107d382aafbSBarry Smith /*
108d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
109d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
112d382aafbSBarry Smith */
113d382aafbSBarry Smith #include <stdio.h>
114d382aafbSBarry Smith 
115d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
116d382aafbSBarry Smith #if !defined(MPIAPI)
117d382aafbSBarry Smith #define MPIAPI
118d382aafbSBarry Smith #endif
119d382aafbSBarry Smith 
120b3506946SBarry Smith 
121d382aafbSBarry Smith /*MC
122d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: beginner
125d382aafbSBarry Smith 
126d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
127d382aafbSBarry Smith M*/
128d382aafbSBarry Smith typedef int PetscErrorCode;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith /*MC
131d382aafbSBarry Smith 
132503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
133d382aafbSBarry Smith          (internal integer in the data structure used for error
134d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1350700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
136d382aafbSBarry Smith 
137d382aafbSBarry Smith     Level: advanced
138d382aafbSBarry Smith 
1390700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
140d382aafbSBarry Smith M*/
1410700a824SBarry Smith typedef int PetscClassId;
142d382aafbSBarry Smith 
143d382aafbSBarry Smith 
144d382aafbSBarry Smith /*MC
145d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
146d382aafbSBarry Smith 
147d382aafbSBarry Smith     Level: intermediate
148d382aafbSBarry Smith 
149d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1503b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
151287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1523b2a8c54SBarry Smith 
1533b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1543b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1553b2a8c54SBarry Smith 
1563b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1573b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
158d382aafbSBarry Smith 
159287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
160287e6e24SBarry Smith      if you run ./configure with the option
161287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
162287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
163287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
164287e6e24SBarry Smith 
165287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
166287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
167287e6e24SBarry Smith 
168d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
169d382aafbSBarry Smith 
170d382aafbSBarry Smith M*/
171d382aafbSBarry Smith typedef int PetscBLASInt;
172d382aafbSBarry Smith 
173d382aafbSBarry Smith /*MC
174d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
175d382aafbSBarry Smith 
176d382aafbSBarry Smith     Level: intermediate
177d382aafbSBarry Smith 
178d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1793b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
180d382aafbSBarry Smith 
1813b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
182d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
183d382aafbSBarry Smith 
1843b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
185d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
186d382aafbSBarry Smith 
187d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
188d382aafbSBarry Smith 
189d382aafbSBarry Smith M*/
190d382aafbSBarry Smith typedef int PetscMPIInt;
191d382aafbSBarry Smith 
192d382aafbSBarry Smith /*MC
193d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
194d382aafbSBarry Smith 
195d382aafbSBarry Smith     Level: intermediate
196d382aafbSBarry Smith 
197d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
198d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
199d382aafbSBarry Smith 
200d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
201d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
202d382aafbSBarry Smith 
203d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
204d382aafbSBarry Smith M*/
205d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
206d382aafbSBarry Smith 
207d382aafbSBarry Smith /*MC
208d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2093b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
210d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
211d382aafbSBarry Smith 
212d382aafbSBarry Smith    Level: intermediate
213d382aafbSBarry Smith 
214d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
215d382aafbSBarry Smith M*/
216d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
217d382aafbSBarry Smith typedef long long PetscInt;
218d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
219d382aafbSBarry Smith #else
220d382aafbSBarry Smith typedef int PetscInt;
221d382aafbSBarry Smith #define MPIU_INT MPI_INT
222d382aafbSBarry Smith #endif
2233855c12bSBarry Smith typedef long long Petsc64bitInt;
224d382aafbSBarry Smith 
22558b60935SBarry Smith /*EC
22658b60935SBarry Smith 
22758b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
22858b60935SBarry Smith 
22958b60935SBarry Smith     Level: advanced
23058b60935SBarry Smith 
23158b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23258b60935SBarry Smith E*/
23358b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
23458b60935SBarry Smith extern const char *PetscPrecisions[];
23558b60935SBarry Smith 
23658b60935SBarry Smith 
237503cfb0cSBarry Smith /*
238503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
239503cfb0cSBarry Smith */
240d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
241d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
242d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
243d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
244d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
245d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
246d382aafbSBarry Smith #else
247d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
248d382aafbSBarry Smith #endif
249d382aafbSBarry Smith 
250d382aafbSBarry Smith 
251d382aafbSBarry Smith /*
252d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
253d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
254d382aafbSBarry Smith */
255d382aafbSBarry Smith 
256d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
257d382aafbSBarry Smith 
258d382aafbSBarry Smith /*
259d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
260d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
261d382aafbSBarry Smith */
262d382aafbSBarry Smith extern FILE* PETSC_STDERR;
263d382aafbSBarry Smith 
264d382aafbSBarry Smith /*
265d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
266d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
267d382aafbSBarry Smith */
268d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
269d382aafbSBarry Smith 
270d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
271d382aafbSBarry Smith /*MC
272d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
273d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
274d382aafbSBarry Smith 
275d382aafbSBarry Smith    Synopsis:
276d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
277d382aafbSBarry Smith 
278eca87e8dSBarry Smith      Not collective
279eca87e8dSBarry Smith 
280d382aafbSBarry Smith    Level: developer
281d382aafbSBarry Smith 
282d382aafbSBarry Smith     Example:
283d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
284d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
285d382aafbSBarry Smith 
286d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
287d382aafbSBarry Smith 
288d382aafbSBarry Smith M*/
289d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
290d382aafbSBarry Smith 
291d382aafbSBarry Smith /*MC
292d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
293d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
294d382aafbSBarry Smith 
295d382aafbSBarry Smith    Synopsis:
296d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
297d382aafbSBarry Smith 
298eca87e8dSBarry Smith    Not collective
299eca87e8dSBarry Smith 
300d382aafbSBarry Smith    Level: developer
301d382aafbSBarry Smith 
302d382aafbSBarry Smith     Example:
303d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
304d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
305d382aafbSBarry Smith 
306d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
307d382aafbSBarry Smith 
308d382aafbSBarry Smith M*/
309d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
310d382aafbSBarry Smith 
311d382aafbSBarry Smith /*MC
312d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
313d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
314d382aafbSBarry Smith             and returns the computed value (istead of an error code)
315d382aafbSBarry Smith 
316d382aafbSBarry Smith    Synopsis:
317d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
318d382aafbSBarry Smith 
319eca87e8dSBarry Smith      Not collective
320eca87e8dSBarry Smith 
321d382aafbSBarry Smith    Level: developer
322d382aafbSBarry Smith 
323d382aafbSBarry Smith     Example:
324d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
325d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
326d382aafbSBarry Smith 
327d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
328d382aafbSBarry Smith 
329d382aafbSBarry Smith M*/
330d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
331d382aafbSBarry Smith 
332d382aafbSBarry Smith #else
333d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
334d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
335d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
336d382aafbSBarry Smith #endif
337d382aafbSBarry Smith 
338d382aafbSBarry Smith /*MC
339d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
340d382aafbSBarry Smith 
341d382aafbSBarry Smith     Synopsis:
342ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
343d382aafbSBarry Smith 
344eca87e8dSBarry Smith     Not Collective
345eca87e8dSBarry Smith 
346d382aafbSBarry Smith     Input Parameters:
347d382aafbSBarry Smith .   cond - condition or expression
348d382aafbSBarry Smith 
349d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
350d382aafbSBarry Smith     branch is unlikely.
351d382aafbSBarry Smith 
352d382aafbSBarry Smith     Level: advanced
353d382aafbSBarry Smith 
354d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
355d382aafbSBarry Smith M*/
356d382aafbSBarry Smith 
357d382aafbSBarry Smith /*MC
358d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
359d382aafbSBarry Smith 
360d382aafbSBarry Smith     Synopsis:
361ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
362d382aafbSBarry Smith 
363eca87e8dSBarry Smith     Not Collective
364eca87e8dSBarry Smith 
365d382aafbSBarry Smith     Input Parameters:
366d382aafbSBarry Smith .   cond - condition or expression
367d382aafbSBarry Smith 
368d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
369d382aafbSBarry Smith     branch is likely.
370d382aafbSBarry Smith 
371d382aafbSBarry Smith     Level: advanced
372d382aafbSBarry Smith 
373d382aafbSBarry Smith .seealso: PetscUnlikely()
374d382aafbSBarry Smith M*/
375d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
376d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
377d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
378d382aafbSBarry Smith #else
379cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
380cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
381d382aafbSBarry Smith #endif
382d382aafbSBarry Smith 
383d382aafbSBarry Smith /*
384d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
385d382aafbSBarry Smith */
386d382aafbSBarry Smith #include "petscmath.h"
387d382aafbSBarry Smith 
388d382aafbSBarry Smith /*
389d382aafbSBarry Smith     Declare extern C stuff after including external header files
390d382aafbSBarry Smith */
391d382aafbSBarry Smith 
392d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
393d382aafbSBarry Smith 
394d382aafbSBarry Smith /*
395d382aafbSBarry Smith        Basic PETSc constants
396d382aafbSBarry Smith */
397d382aafbSBarry Smith 
398d382aafbSBarry Smith /*E
399ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
400d382aafbSBarry Smith 
401d382aafbSBarry Smith    Level: beginner
402d382aafbSBarry Smith 
403ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
40434e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
40534e82e7dSBarry Smith 
406d382aafbSBarry Smith E*/
407ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
408ace3abfcSBarry Smith extern const char *PetscBools[];
40970b3c8c7SBarry Smith 
41070b3c8c7SBarry Smith /*E
41170b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
41270b3c8c7SBarry Smith 
41370b3c8c7SBarry Smith    Level: beginner
41470b3c8c7SBarry Smith 
41570b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
41670b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
41770b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
41870b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
41970b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
42070b3c8c7SBarry Smith 
42170b3c8c7SBarry Smith E*/
42270b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
42370b3c8c7SBarry Smith extern const char *PetscCopyModes[];
424d382aafbSBarry Smith 
425d382aafbSBarry Smith /*MC
426ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
427d382aafbSBarry Smith 
428d382aafbSBarry Smith     Level: beginner
429d382aafbSBarry Smith 
430d382aafbSBarry Smith     Note: Zero integer
431d382aafbSBarry Smith 
432ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
433d382aafbSBarry Smith M*/
434d382aafbSBarry Smith 
435d382aafbSBarry Smith /*MC
436ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
437d382aafbSBarry Smith 
438d382aafbSBarry Smith     Level: beginner
439d382aafbSBarry Smith 
440d382aafbSBarry Smith     Note: Nonzero integer
441d382aafbSBarry Smith 
442ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
443d382aafbSBarry Smith M*/
444d382aafbSBarry Smith 
445d382aafbSBarry Smith /*MC
446d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
447d382aafbSBarry Smith 
448d382aafbSBarry Smith    Level: beginner
449d382aafbSBarry Smith 
450d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
451d382aafbSBarry Smith           some default
452d382aafbSBarry Smith 
453d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
454503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
455d382aafbSBarry Smith 
45634e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
45734e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
45834e82e7dSBarry Smith 
459d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
460d382aafbSBarry Smith 
461d382aafbSBarry Smith M*/
462d382aafbSBarry Smith #define PETSC_NULL           0
463d382aafbSBarry Smith 
464d382aafbSBarry Smith /*MC
465d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
466d382aafbSBarry Smith 
467d382aafbSBarry Smith    Level: beginner
468d382aafbSBarry Smith 
469d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
470d382aafbSBarry Smith           some default
471d382aafbSBarry Smith 
472d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
473d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
474d382aafbSBarry Smith 
475d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
476d382aafbSBarry Smith 
477d382aafbSBarry Smith M*/
478d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
479d382aafbSBarry Smith 
480d382aafbSBarry Smith /*MC
481557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
482557d4da8SBarry Smith        where you wish PETSc to use the default.
483557d4da8SBarry Smith 
484557d4da8SBarry Smith    Level: beginner
485557d4da8SBarry Smith 
486557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
487557d4da8SBarry Smith 
488557d4da8SBarry Smith M*/
489557d4da8SBarry Smith #define PETSC_DECIDE  -1
490557d4da8SBarry Smith 
491557d4da8SBarry Smith /*MC
492d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
493d382aafbSBarry Smith        where you wish PETSc to compute the required value.
494d382aafbSBarry Smith 
495d382aafbSBarry Smith    Level: beginner
496d382aafbSBarry Smith 
497557d4da8SBarry Smith 
498557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
499557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
500557d4da8SBarry Smith 
501d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
502d382aafbSBarry Smith 
503d382aafbSBarry Smith M*/
504d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
505d382aafbSBarry Smith 
506d382aafbSBarry Smith /*MC
507557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
508557d4da8SBarry Smith        where you wish PETSc to use the default.
509557d4da8SBarry Smith 
510557d4da8SBarry Smith    Level: beginner
511557d4da8SBarry Smith 
512557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
513557d4da8SBarry Smith 
514557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
515557d4da8SBarry Smith 
516557d4da8SBarry Smith M*/
517557d4da8SBarry Smith #define PETSC_DEFAULT  -2
518557d4da8SBarry Smith 
519557d4da8SBarry Smith /*MC
520d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
521d382aafbSBarry Smith            all the processs that PETSc knows about.
522d382aafbSBarry Smith 
523d382aafbSBarry Smith    Level: beginner
524d382aafbSBarry Smith 
525d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
526d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
527d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
528d382aafbSBarry Smith           PetscInitialize()
529d382aafbSBarry Smith 
530d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
531d382aafbSBarry Smith 
532d382aafbSBarry Smith M*/
533d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
534d382aafbSBarry Smith 
535d382aafbSBarry Smith /*MC
536503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
537d382aafbSBarry Smith 
538d382aafbSBarry Smith    Level: beginner
539d382aafbSBarry Smith 
540d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
541d382aafbSBarry Smith 
542d382aafbSBarry Smith M*/
543d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
544d382aafbSBarry Smith 
5457087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5467087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
547d382aafbSBarry Smith 
5487087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5497087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5507087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
551d382aafbSBarry Smith 
552d382aafbSBarry Smith /*MC
553d382aafbSBarry Smith    PetscMalloc - Allocates memory
554d382aafbSBarry Smith 
555eca87e8dSBarry Smith    Synopsis:
556eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
557eca87e8dSBarry Smith 
558eca87e8dSBarry Smith    Not Collective
559eca87e8dSBarry Smith 
560d382aafbSBarry Smith    Input Parameter:
561d382aafbSBarry Smith .  m - number of bytes to allocate
562d382aafbSBarry Smith 
563d382aafbSBarry Smith    Output Parameter:
564d382aafbSBarry Smith .  result - memory allocated
565d382aafbSBarry Smith 
566d382aafbSBarry Smith    Level: beginner
567d382aafbSBarry Smith 
568d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
569d382aafbSBarry Smith 
570d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
571d382aafbSBarry Smith           properly handle not freeing the null pointer.
572d382aafbSBarry Smith 
573d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
574d382aafbSBarry Smith 
575d382aafbSBarry Smith   Concepts: memory allocation
576d382aafbSBarry Smith 
577d382aafbSBarry Smith M*/
5782714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
579d382aafbSBarry Smith 
580d382aafbSBarry Smith /*MC
581503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
582d382aafbSBarry Smith 
583d382aafbSBarry Smith    Synopsis:
584d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
585d382aafbSBarry Smith 
586eca87e8dSBarry Smith    Not Collective
587eca87e8dSBarry Smith 
588eca87e8dSBarry Smith    Input Parameters:
589eca87e8dSBarry Smith .  addr - address to align (any pointer type)
590eca87e8dSBarry Smith 
591d382aafbSBarry Smith    Level: developer
592d382aafbSBarry Smith 
593d382aafbSBarry Smith .seealso: PetscMallocAlign()
594d382aafbSBarry Smith 
595d382aafbSBarry Smith   Concepts: memory allocation
596d382aafbSBarry Smith M*/
597d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
598d382aafbSBarry Smith 
599d382aafbSBarry Smith /*MC
600503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
601d382aafbSBarry Smith 
602eca87e8dSBarry Smith    Synopsis:
603eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
604eca87e8dSBarry Smith 
605eca87e8dSBarry Smith    Not Collective
606eca87e8dSBarry Smith 
607d382aafbSBarry Smith    Input Parameter:
608d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
609d382aafbSBarry Smith .  t1 - type of first memory elements
610d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
611d382aafbSBarry Smith -  t2 - type of second memory elements
612d382aafbSBarry Smith 
613d382aafbSBarry Smith    Output Parameter:
614d382aafbSBarry Smith +  r1 - memory allocated in first chunk
615d382aafbSBarry Smith -  r2 - memory allocated in second chunk
616d382aafbSBarry Smith 
617d382aafbSBarry Smith    Level: developer
618d382aafbSBarry Smith 
619d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
620d382aafbSBarry Smith 
621d382aafbSBarry Smith   Concepts: memory allocation
622d382aafbSBarry Smith 
623d382aafbSBarry Smith M*/
624d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
625d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
626d382aafbSBarry Smith #else
6273b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
628d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
629d382aafbSBarry Smith #endif
630d382aafbSBarry Smith 
631d382aafbSBarry Smith /*MC
632503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
633d382aafbSBarry Smith 
634eca87e8dSBarry Smith    Synopsis:
635eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
636eca87e8dSBarry Smith 
637eca87e8dSBarry Smith    Not Collective
638eca87e8dSBarry Smith 
639d382aafbSBarry Smith    Input Parameter:
640d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
641d382aafbSBarry Smith .  t1 - type of first memory elements
642d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
643d382aafbSBarry Smith .  t2 - type of second memory elements
644d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
645d382aafbSBarry Smith -  t3 - type of third memory elements
646d382aafbSBarry Smith 
647d382aafbSBarry Smith    Output Parameter:
648d382aafbSBarry Smith +  r1 - memory allocated in first chunk
649d382aafbSBarry Smith .  r2 - memory allocated in second chunk
650d382aafbSBarry Smith -  r3 - memory allocated in third chunk
651d382aafbSBarry Smith 
652d382aafbSBarry Smith    Level: developer
653d382aafbSBarry Smith 
654d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
655d382aafbSBarry Smith 
656d382aafbSBarry Smith   Concepts: memory allocation
657d382aafbSBarry Smith 
658d382aafbSBarry Smith M*/
659d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
660d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
661d382aafbSBarry Smith #else
6623b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
663d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
664d382aafbSBarry Smith #endif
665d382aafbSBarry Smith 
666d382aafbSBarry Smith /*MC
667503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
668d382aafbSBarry Smith 
669eca87e8dSBarry Smith    Synopsis:
670eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
671eca87e8dSBarry Smith 
672eca87e8dSBarry Smith    Not Collective
673eca87e8dSBarry Smith 
674d382aafbSBarry Smith    Input Parameter:
675d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
676d382aafbSBarry Smith .  t1 - type of first memory elements
677d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
678d382aafbSBarry Smith .  t2 - type of second memory elements
679d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
680d382aafbSBarry Smith .  t3 - type of third memory elements
681d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
682d382aafbSBarry Smith -  t4 - type of fourth memory elements
683d382aafbSBarry Smith 
684d382aafbSBarry Smith    Output Parameter:
685d382aafbSBarry Smith +  r1 - memory allocated in first chunk
686d382aafbSBarry Smith .  r2 - memory allocated in second chunk
687d382aafbSBarry Smith .  r3 - memory allocated in third chunk
688d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
689d382aafbSBarry Smith 
690d382aafbSBarry Smith    Level: developer
691d382aafbSBarry Smith 
692d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
693d382aafbSBarry Smith 
694d382aafbSBarry Smith   Concepts: memory allocation
695d382aafbSBarry Smith 
696d382aafbSBarry Smith M*/
697d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
698d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
699d382aafbSBarry Smith #else
700d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
7013b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
702d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
703d382aafbSBarry Smith #endif
704d382aafbSBarry Smith 
705d382aafbSBarry Smith /*MC
706503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
707d382aafbSBarry Smith 
708eca87e8dSBarry Smith    Synopsis:
709eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
710eca87e8dSBarry Smith 
711eca87e8dSBarry Smith    Not Collective
712eca87e8dSBarry Smith 
713d382aafbSBarry Smith    Input Parameter:
714d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
715d382aafbSBarry Smith .  t1 - type of first memory elements
716d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
717d382aafbSBarry Smith .  t2 - type of second memory elements
718d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
719d382aafbSBarry Smith .  t3 - type of third memory elements
720d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
721d382aafbSBarry Smith .  t4 - type of fourth memory elements
722d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
723d382aafbSBarry Smith -  t5 - type of fifth memory elements
724d382aafbSBarry Smith 
725d382aafbSBarry Smith    Output Parameter:
726d382aafbSBarry Smith +  r1 - memory allocated in first chunk
727d382aafbSBarry Smith .  r2 - memory allocated in second chunk
728d382aafbSBarry Smith .  r3 - memory allocated in third chunk
729d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
730d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
731d382aafbSBarry Smith 
732d382aafbSBarry Smith    Level: developer
733d382aafbSBarry Smith 
734d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
735d382aafbSBarry Smith 
736d382aafbSBarry Smith   Concepts: memory allocation
737d382aafbSBarry Smith 
738d382aafbSBarry Smith M*/
739d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
740d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
741d382aafbSBarry Smith #else
742d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7433b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
744d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
745d382aafbSBarry Smith #endif
746d382aafbSBarry Smith 
747d382aafbSBarry Smith 
748d382aafbSBarry Smith /*MC
749503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
750d382aafbSBarry Smith 
751eca87e8dSBarry Smith    Synopsis:
752eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
753eca87e8dSBarry Smith 
754eca87e8dSBarry Smith    Not Collective
755eca87e8dSBarry Smith 
756d382aafbSBarry Smith    Input Parameter:
757d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
758d382aafbSBarry Smith .  t1 - type of first memory elements
759d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
760d382aafbSBarry Smith .  t2 - type of second memory elements
761d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
762d382aafbSBarry Smith .  t3 - type of third memory elements
763d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
764d382aafbSBarry Smith .  t4 - type of fourth memory elements
765d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
766d382aafbSBarry Smith .  t5 - type of fifth memory elements
767d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
768d382aafbSBarry Smith -  t6 - type of sixth memory elements
769d382aafbSBarry Smith 
770d382aafbSBarry Smith    Output Parameter:
771d382aafbSBarry Smith +  r1 - memory allocated in first chunk
772d382aafbSBarry Smith .  r2 - memory allocated in second chunk
773d382aafbSBarry Smith .  r3 - memory allocated in third chunk
774d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
775d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
776d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
777d382aafbSBarry Smith 
778d382aafbSBarry Smith    Level: developer
779d382aafbSBarry Smith 
780d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
781d382aafbSBarry Smith 
782d382aafbSBarry Smith   Concepts: memory allocation
783d382aafbSBarry Smith 
784d382aafbSBarry Smith M*/
785d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
786d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
787d382aafbSBarry Smith #else
788d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7893b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
790d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
791d382aafbSBarry Smith #endif
792d382aafbSBarry Smith 
793d382aafbSBarry Smith /*MC
794503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
795d382aafbSBarry Smith 
796eca87e8dSBarry Smith    Synopsis:
797eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
798eca87e8dSBarry Smith 
799eca87e8dSBarry Smith    Not Collective
800eca87e8dSBarry Smith 
801d382aafbSBarry Smith    Input Parameter:
802d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
803d382aafbSBarry Smith .  t1 - type of first memory elements
804d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
805d382aafbSBarry Smith .  t2 - type of second memory elements
806d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
807d382aafbSBarry Smith .  t3 - type of third memory elements
808d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
809d382aafbSBarry Smith .  t4 - type of fourth memory elements
810d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
811d382aafbSBarry Smith .  t5 - type of fifth memory elements
812d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
813d382aafbSBarry Smith .  t6 - type of sixth memory elements
814d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
815d382aafbSBarry Smith -  t7 - type of sixth memory elements
816d382aafbSBarry Smith 
817d382aafbSBarry Smith    Output Parameter:
818d382aafbSBarry Smith +  r1 - memory allocated in first chunk
819d382aafbSBarry Smith .  r2 - memory allocated in second chunk
820d382aafbSBarry Smith .  r3 - memory allocated in third chunk
821d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
822d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
823d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
824eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
825d382aafbSBarry Smith 
826d382aafbSBarry Smith    Level: developer
827d382aafbSBarry Smith 
828d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
829d382aafbSBarry Smith 
830d382aafbSBarry Smith   Concepts: memory allocation
831d382aafbSBarry Smith 
832d382aafbSBarry Smith M*/
833d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
834d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
835d382aafbSBarry Smith #else
836d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8373b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
838d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
839d382aafbSBarry Smith #endif
840d382aafbSBarry Smith 
841d382aafbSBarry Smith /*MC
842503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
843d382aafbSBarry Smith 
844eca87e8dSBarry Smith    Synopsis:
845eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
846eca87e8dSBarry Smith 
847eca87e8dSBarry Smith    Not Collective
848eca87e8dSBarry Smith 
849d382aafbSBarry Smith    Input Parameter:
850d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
851d382aafbSBarry Smith 
852d382aafbSBarry Smith    Output Parameter:
853d382aafbSBarry Smith .  result - memory allocated
854d382aafbSBarry Smith 
855d382aafbSBarry Smith    Level: beginner
856d382aafbSBarry Smith 
857ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
858d382aafbSBarry Smith 
859d382aafbSBarry Smith   Concepts: memory allocation
860d382aafbSBarry Smith 
861d382aafbSBarry Smith M*/
862d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
863ad0619ddSBarry Smith 
864ad0619ddSBarry Smith /*MC
865ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
866ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
867ad0619ddSBarry Smith 
868ad0619ddSBarry Smith    Synopsis:
869ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
870ad0619ddSBarry Smith 
871ad0619ddSBarry Smith    Not Collective
872ad0619ddSBarry Smith 
873ad0619ddSBarry Smith    Input Parameter:
874ad0619ddSBarry Smith +  obj - object memory is logged to
875ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
876ad0619ddSBarry Smith 
877ad0619ddSBarry Smith    Output Parameter:
878ad0619ddSBarry Smith .  result - memory allocated
879ad0619ddSBarry Smith 
880ad0619ddSBarry Smith    Level: developer
881ad0619ddSBarry Smith 
882ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
883ad0619ddSBarry Smith 
884ad0619ddSBarry Smith   Concepts: memory allocation
885ad0619ddSBarry Smith 
886ad0619ddSBarry Smith M*/
887d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
888d382aafbSBarry Smith 
889d382aafbSBarry Smith /*MC
890d382aafbSBarry Smith    PetscFree - Frees memory
891d382aafbSBarry Smith 
892eca87e8dSBarry Smith    Synopsis:
893eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
894eca87e8dSBarry Smith 
895eca87e8dSBarry Smith    Not Collective
896eca87e8dSBarry Smith 
897d382aafbSBarry Smith    Input Parameter:
898d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
899d382aafbSBarry Smith 
900d382aafbSBarry Smith    Level: beginner
901d382aafbSBarry Smith 
902d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
903d382aafbSBarry Smith 
904d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
905d382aafbSBarry Smith 
906d382aafbSBarry Smith   Concepts: memory allocation
907d382aafbSBarry Smith 
908d382aafbSBarry Smith M*/
90912537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
910d382aafbSBarry Smith 
911d382aafbSBarry Smith /*MC
912d382aafbSBarry Smith    PetscFreeVoid - Frees memory
913d382aafbSBarry Smith 
914d382aafbSBarry Smith    Synopsis:
915d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
916d382aafbSBarry Smith 
917eca87e8dSBarry Smith    Not Collective
918eca87e8dSBarry Smith 
919eca87e8dSBarry Smith    Input Parameter:
920eca87e8dSBarry Smith .   memory - memory to free
921eca87e8dSBarry Smith 
922d382aafbSBarry Smith    Level: beginner
923d382aafbSBarry Smith 
924d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
925d382aafbSBarry Smith 
926d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
927d382aafbSBarry Smith 
928d382aafbSBarry Smith   Concepts: memory allocation
929d382aafbSBarry Smith 
930d382aafbSBarry Smith M*/
9312714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
932d382aafbSBarry Smith 
933d382aafbSBarry Smith 
934d382aafbSBarry Smith /*MC
935d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
936d382aafbSBarry Smith 
937eca87e8dSBarry Smith    Synopsis:
938eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
939eca87e8dSBarry Smith 
940eca87e8dSBarry Smith    Not Collective
941eca87e8dSBarry Smith 
942d382aafbSBarry Smith    Input Parameter:
943d382aafbSBarry Smith +   memory1 - memory to free
944d382aafbSBarry Smith -   memory2 - 2nd memory to free
945d382aafbSBarry Smith 
946d382aafbSBarry Smith    Level: developer
947d382aafbSBarry Smith 
948d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
949d382aafbSBarry Smith 
950d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
951d382aafbSBarry Smith 
952d382aafbSBarry Smith   Concepts: memory allocation
953d382aafbSBarry Smith 
954d382aafbSBarry Smith M*/
955d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
956d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
957d382aafbSBarry Smith #else
95881dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
959d382aafbSBarry Smith #endif
960d382aafbSBarry Smith 
961d382aafbSBarry Smith /*MC
962d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
963d382aafbSBarry Smith 
964eca87e8dSBarry Smith    Synopsis:
965eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
966eca87e8dSBarry Smith 
967eca87e8dSBarry Smith    Not Collective
968eca87e8dSBarry Smith 
969d382aafbSBarry Smith    Input Parameter:
970d382aafbSBarry Smith +   memory1 - memory to free
971d382aafbSBarry Smith .   memory2 - 2nd memory to free
972d382aafbSBarry Smith -   memory3 - 3rd memory to free
973d382aafbSBarry Smith 
974d382aafbSBarry Smith    Level: developer
975d382aafbSBarry Smith 
976d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
977d382aafbSBarry Smith 
978d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
979d382aafbSBarry Smith 
980d382aafbSBarry Smith   Concepts: memory allocation
981d382aafbSBarry Smith 
982d382aafbSBarry Smith M*/
983d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
984d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
985d382aafbSBarry Smith #else
98681dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
987d382aafbSBarry Smith #endif
988d382aafbSBarry Smith 
989d382aafbSBarry Smith /*MC
990d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
991d382aafbSBarry Smith 
992eca87e8dSBarry Smith    Synopsis:
993eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
994eca87e8dSBarry Smith 
995eca87e8dSBarry Smith    Not Collective
996eca87e8dSBarry Smith 
997d382aafbSBarry Smith    Input Parameter:
998d382aafbSBarry Smith +   m1 - memory to free
999d382aafbSBarry Smith .   m2 - 2nd memory to free
1000d382aafbSBarry Smith .   m3 - 3rd memory to free
1001d382aafbSBarry Smith -   m4 - 4th memory to free
1002d382aafbSBarry Smith 
1003d382aafbSBarry Smith    Level: developer
1004d382aafbSBarry Smith 
1005d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1006d382aafbSBarry Smith 
1007d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1008d382aafbSBarry Smith 
1009d382aafbSBarry Smith   Concepts: memory allocation
1010d382aafbSBarry Smith 
1011d382aafbSBarry Smith M*/
1012d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1013d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1014d382aafbSBarry Smith #else
101581dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1016d382aafbSBarry Smith #endif
1017d382aafbSBarry Smith 
1018d382aafbSBarry Smith /*MC
1019d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1020d382aafbSBarry Smith 
1021eca87e8dSBarry Smith    Synopsis:
1022eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1023eca87e8dSBarry Smith 
1024eca87e8dSBarry Smith    Not Collective
1025eca87e8dSBarry Smith 
1026d382aafbSBarry Smith    Input Parameter:
1027d382aafbSBarry Smith +   m1 - memory to free
1028d382aafbSBarry Smith .   m2 - 2nd memory to free
1029d382aafbSBarry Smith .   m3 - 3rd memory to free
1030d382aafbSBarry Smith .   m4 - 4th memory to free
1031d382aafbSBarry Smith -   m5 - 5th memory to free
1032d382aafbSBarry Smith 
1033d382aafbSBarry Smith    Level: developer
1034d382aafbSBarry Smith 
1035d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1036d382aafbSBarry Smith 
1037d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1038d382aafbSBarry Smith 
1039d382aafbSBarry Smith   Concepts: memory allocation
1040d382aafbSBarry Smith 
1041d382aafbSBarry Smith M*/
1042d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1043d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1044d382aafbSBarry Smith #else
104581dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1046d382aafbSBarry Smith #endif
1047d382aafbSBarry Smith 
1048d382aafbSBarry Smith 
1049d382aafbSBarry Smith /*MC
1050d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1051d382aafbSBarry Smith 
1052eca87e8dSBarry Smith    Synopsis:
1053eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1054eca87e8dSBarry Smith 
1055eca87e8dSBarry Smith    Not Collective
1056eca87e8dSBarry Smith 
1057d382aafbSBarry Smith    Input Parameter:
1058d382aafbSBarry Smith +   m1 - memory to free
1059d382aafbSBarry Smith .   m2 - 2nd memory to free
1060d382aafbSBarry Smith .   m3 - 3rd memory to free
1061d382aafbSBarry Smith .   m4 - 4th memory to free
1062d382aafbSBarry Smith .   m5 - 5th memory to free
1063d382aafbSBarry Smith -   m6 - 6th memory to free
1064d382aafbSBarry Smith 
1065d382aafbSBarry Smith 
1066d382aafbSBarry Smith    Level: developer
1067d382aafbSBarry Smith 
1068d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1069d382aafbSBarry Smith 
1070d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1071d382aafbSBarry Smith 
1072d382aafbSBarry Smith   Concepts: memory allocation
1073d382aafbSBarry Smith 
1074d382aafbSBarry Smith M*/
1075d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1076d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1077d382aafbSBarry Smith #else
107881dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1079d382aafbSBarry Smith #endif
1080d382aafbSBarry Smith 
1081d382aafbSBarry Smith /*MC
1082d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1083d382aafbSBarry Smith 
1084eca87e8dSBarry Smith    Synopsis:
1085eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1086eca87e8dSBarry Smith 
1087eca87e8dSBarry Smith    Not Collective
1088eca87e8dSBarry Smith 
1089d382aafbSBarry Smith    Input Parameter:
1090d382aafbSBarry Smith +   m1 - memory to free
1091d382aafbSBarry Smith .   m2 - 2nd memory to free
1092d382aafbSBarry Smith .   m3 - 3rd memory to free
1093d382aafbSBarry Smith .   m4 - 4th memory to free
1094d382aafbSBarry Smith .   m5 - 5th memory to free
1095d382aafbSBarry Smith .   m6 - 6th memory to free
1096d382aafbSBarry Smith -   m7 - 7th memory to free
1097d382aafbSBarry Smith 
1098d382aafbSBarry Smith 
1099d382aafbSBarry Smith    Level: developer
1100d382aafbSBarry Smith 
1101d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1102d382aafbSBarry Smith 
1103d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1104d382aafbSBarry Smith           PetscMalloc7()
1105d382aafbSBarry Smith 
1106d382aafbSBarry Smith   Concepts: memory allocation
1107d382aafbSBarry Smith 
1108d382aafbSBarry Smith M*/
1109d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1110d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1111d382aafbSBarry Smith #else
111281dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1113d382aafbSBarry Smith #endif
1114d382aafbSBarry Smith 
11157087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11167087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11177087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11187087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1119d382aafbSBarry Smith 
1120d382aafbSBarry Smith /*
112166d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1122d382aafbSBarry Smith */
11237087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11247087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11257087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11267087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11277087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11287087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11297087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1130d382aafbSBarry Smith 
1131d382aafbSBarry Smith 
1132d382aafbSBarry Smith /*E
1133d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1134d382aafbSBarry Smith 
1135d382aafbSBarry Smith    Level: beginner
1136d382aafbSBarry Smith 
1137d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1138d382aafbSBarry Smith 
1139d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1140d382aafbSBarry Smith           PetscDataTypeGetSize()
1141d382aafbSBarry Smith 
1142d382aafbSBarry Smith E*/
1143d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1144557d4da8SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10} PetscDataType;
1145d382aafbSBarry Smith extern const char *PetscDataTypes[];
1146d382aafbSBarry Smith 
1147d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1148d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1149d382aafbSBarry Smith #else
1150ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1151d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
1152d382aafbSBarry Smith #else
1153d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1154d382aafbSBarry Smith #endif
1155d382aafbSBarry Smith #endif
1156ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1157d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
1158d382aafbSBarry Smith #else
1159d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1160d382aafbSBarry Smith #endif
1161d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1162d382aafbSBarry Smith 
11637087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11647087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11657087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1166d382aafbSBarry Smith 
1167d382aafbSBarry Smith /*
1168d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1169d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1170d382aafbSBarry Smith    functionality and/or error checking.
1171d382aafbSBarry Smith */
11727087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11737087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11747087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11757087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11767087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11777087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11787087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11797087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11807087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11817087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11827087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11837087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11847087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11857087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11867087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11877087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11887087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11897087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11907087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
119174722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
11927ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
11937087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1195d382aafbSBarry Smith 
1196d382aafbSBarry Smith /*S
1197d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1198d382aafbSBarry Smith 
1199d382aafbSBarry Smith   Level: intermediate
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1202d382aafbSBarry Smith S*/
1203d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1204d382aafbSBarry Smith 
12057087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
12067087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
12078c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1208d382aafbSBarry Smith 
1209d382aafbSBarry Smith /*
1210d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1211d382aafbSBarry Smith */
12127087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1213ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12147087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1215d382aafbSBarry Smith #else
1216d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1217d382aafbSBarry Smith #endif
1218ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1219d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1220d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1221d9822059SBarry Smith #else
1222d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1223d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1224d9822059SBarry Smith #endif
12257087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1226d382aafbSBarry Smith 
1227eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1228eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1229eb3f98d2SBarry Smith 
1230d382aafbSBarry Smith /*S
1231d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1232d382aafbSBarry Smith 
1233d382aafbSBarry Smith    Level: beginner
1234d382aafbSBarry Smith 
1235d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1236d382aafbSBarry Smith 
12371890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1238d382aafbSBarry Smith S*/
1239d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1240d382aafbSBarry Smith 
1241d382aafbSBarry Smith /*S
1242d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1243d382aafbSBarry Smith       by string name
1244d382aafbSBarry Smith 
1245d382aafbSBarry Smith    Level: advanced
1246d382aafbSBarry Smith 
1247d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1248d382aafbSBarry Smith S*/
1249d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1250d382aafbSBarry Smith 
1251d382aafbSBarry Smith /*E
1252d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1253d382aafbSBarry Smith 
1254d382aafbSBarry Smith   Level: beginner
1255d382aafbSBarry Smith 
1256d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1257d382aafbSBarry Smith 
1258d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1259d382aafbSBarry Smith 
1260d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1261d382aafbSBarry Smith 
1262d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1263d382aafbSBarry Smith 
1264d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1265d382aafbSBarry Smith 
1266d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1267d382aafbSBarry Smith E*/
1268d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1269d382aafbSBarry Smith 
1270d382aafbSBarry Smith #include "petscviewer.h"
1271d382aafbSBarry Smith #include "petscoptions.h"
1272d382aafbSBarry Smith 
12730700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12747087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12757087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12767087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1277d382aafbSBarry Smith 
1278d382aafbSBarry Smith /*
1279d382aafbSBarry Smith    Routines that get memory usage information from the OS
1280d382aafbSBarry Smith */
12817087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12827087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12837087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12847087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1285d382aafbSBarry Smith 
12867087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12877087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12887087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12897087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1290d382aafbSBarry Smith 
1291d382aafbSBarry Smith /*
1292d382aafbSBarry Smith    Initialization of PETSc
1293d382aafbSBarry Smith */
12947087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1295d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
12967087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
12977087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
12987087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
12997087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
130009573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
13017087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
13027087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
13037087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1304d382aafbSBarry Smith 
13057087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
13067087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1307d382aafbSBarry Smith 
1308d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
130985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
131085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
131185afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
131285afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
131385afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
131485afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
131585afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1316d382aafbSBarry Smith 
13177087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13187087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13197087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13205180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1321d382aafbSBarry Smith 
1322d382aafbSBarry Smith /*
1323d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1324d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1325d382aafbSBarry Smith    C++.
1326d382aafbSBarry Smith */
1327d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1328d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1329d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1330d382aafbSBarry Smith 
1331d382aafbSBarry Smith /*
1332d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1333d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1334503cfb0cSBarry Smith 
1335503cfb0cSBarry Smith    Level: developer
1336503cfb0cSBarry Smith 
1337503cfb0cSBarry Smith .seealso: PetscUseMethod()
1338d382aafbSBarry Smith */
1339d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1340d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1341d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1342d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1343d382aafbSBarry Smith   }
1344503cfb0cSBarry Smith 
1345503cfb0cSBarry Smith /*
1346503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1347503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1348503cfb0cSBarry Smith 
1349503cfb0cSBarry Smith    Level: developer
1350503cfb0cSBarry Smith 
1351503cfb0cSBarry Smith .seealso: PetscTryMethod()
1352503cfb0cSBarry Smith */
1353d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1354d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1355d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1356d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1357703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1358d382aafbSBarry Smith   }
1359503cfb0cSBarry Smith 
1360d382aafbSBarry Smith /*
1361d382aafbSBarry Smith     Functions that can act on any PETSc object.
1362d382aafbSBarry Smith */
1363fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13647087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13657087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1366609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13677087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13687087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13697087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13707087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13717087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13727087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13737087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13747087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13757087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13767087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13777087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13787087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13797087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13807087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13817087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13826ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13837087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13847087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13857087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13867087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13877087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13887087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13907087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1391d382aafbSBarry Smith 
1392d382aafbSBarry Smith /*MC
1393d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1394d382aafbSBarry Smith 
1395eca87e8dSBarry Smith     Synopsis:
1396eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1397eca87e8dSBarry Smith 
1398ad4df100SBarry Smith    Logically Collective on PetscObject
1399d382aafbSBarry Smith 
1400d382aafbSBarry Smith    Input Parameters:
1401d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1402d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1403d382aafbSBarry Smith .  name - name associated with the child function
1404d382aafbSBarry Smith .  fname - name of the function
1405d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1406d382aafbSBarry Smith 
1407d382aafbSBarry Smith    Level: advanced
1408d382aafbSBarry Smith 
1409d382aafbSBarry Smith 
1410d382aafbSBarry Smith    Notes:
1411d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1412d382aafbSBarry Smith 
1413d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1414d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1415d382aafbSBarry Smith 
1416d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
141720de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1418d382aafbSBarry Smith    enabled.
1419d382aafbSBarry Smith 
1420d382aafbSBarry Smith    Concepts: objects^composing functions
1421d382aafbSBarry Smith    Concepts: composing functions
1422d382aafbSBarry Smith    Concepts: functions^querying
1423d382aafbSBarry Smith    Concepts: objects^querying
1424d382aafbSBarry Smith    Concepts: querying objects
1425d382aafbSBarry Smith 
1426d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1427d382aafbSBarry Smith M*/
1428d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1429d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1430d382aafbSBarry Smith #else
1431d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1432d382aafbSBarry Smith #endif
1433d382aafbSBarry Smith 
14347087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14357087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14367087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14377087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14387087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14397087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14407087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14417087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14427087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14437087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14447087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14457087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14462b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14477087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14487087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1449d382aafbSBarry Smith 
1450d382aafbSBarry Smith /*
1451d382aafbSBarry Smith     Defines PETSc error handling.
1452d382aafbSBarry Smith */
1453d382aafbSBarry Smith #include "petscerror.h"
1454d382aafbSBarry Smith 
1455d382aafbSBarry Smith /*S
1456503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1457d382aafbSBarry Smith 
14581d0fab5eSBarry Smith    Level: developer
1459d382aafbSBarry Smith 
14601d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14611d0fab5eSBarry Smith 
14621d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1463d382aafbSBarry Smith S*/
1464d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1465d382aafbSBarry Smith 
1466fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14677087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1468bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14697087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14706ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14717087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1472d382aafbSBarry Smith 
1473d382aafbSBarry Smith /*
1474503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1475d382aafbSBarry Smith   link libraries that will be loaded as needed.
1476d382aafbSBarry Smith */
14777087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14787087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14794b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14807087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1481d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1482d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1483d382aafbSBarry Smith #else
1484d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1485d382aafbSBarry Smith #endif
14867087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14877087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14887087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14897087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1490d382aafbSBarry Smith 
1491d382aafbSBarry Smith /*S
1492d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1493d382aafbSBarry Smith 
1494d382aafbSBarry Smith    Level: advanced
1495d382aafbSBarry Smith 
149620de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1497d382aafbSBarry Smith 
1498d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1499d382aafbSBarry Smith S*/
1500d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
15017087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
15027087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
15037087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
15047087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
15057087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
15067087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
15077087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
15087087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
15097087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1510d382aafbSBarry Smith 
1511d382aafbSBarry Smith /*
151205846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
151305846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
151405846914SDmitry Karpeev */
151505846914SDmitry Karpeev #include "petscfwk.h"
151605846914SDmitry Karpeev 
151705846914SDmitry Karpeev /*
1518d382aafbSBarry Smith      Useful utility routines
1519d382aafbSBarry Smith */
15207087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15217087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15227087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1523d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1524d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15257087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1526d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1527d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15287087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15297087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1530d382aafbSBarry Smith 
1531503cfb0cSBarry Smith /*
1532ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1533503cfb0cSBarry Smith 
1534503cfb0cSBarry Smith     Notes: This is useful in cases like
1535503cfb0cSBarry Smith $     int        *a;
1536ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1537ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1538503cfb0cSBarry Smith */
1539d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1540503cfb0cSBarry Smith 
1541d382aafbSBarry Smith /*
1542d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1543d382aafbSBarry Smith */
1544d382aafbSBarry Smith #include "petscdraw.h"
1545d382aafbSBarry Smith 
1546d382aafbSBarry Smith /*
1547d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1548d382aafbSBarry Smith */
1549d382aafbSBarry Smith #include "private/petscimpl.h"
1550503cfb0cSBarry Smith 
1551238ccf28SShri Abhyankar 
1552d382aafbSBarry Smith /*MC
1553d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1554d382aafbSBarry Smith 
1555d382aafbSBarry Smith    Synopsis:
1556d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1557d382aafbSBarry Smith 
1558eca87e8dSBarry Smith     Not Collective
1559eca87e8dSBarry Smith 
1560d382aafbSBarry Smith     Input Parameters:
1561d382aafbSBarry Smith .   format - the usual printf() format string
1562d382aafbSBarry Smith 
1563d382aafbSBarry Smith    Options Database Keys:
1564d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1565d382aafbSBarry Smith          (default) stderr
1566d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1567d382aafbSBarry Smith           error is handled.)
1568d382aafbSBarry Smith 
1569d382aafbSBarry Smith    Notes: Use
1570d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1571d382aafbSBarry Smith $                        error is handled.) and
1572d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1573c9a19010SBarry Smith $        of you can use your own function
1574d382aafbSBarry Smith 
1575d382aafbSBarry Smith           Use
1576d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1577d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1578d382aafbSBarry Smith 
1579d382aafbSBarry Smith           Use
1580d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1581d382aafbSBarry Smith 
1582d382aafbSBarry Smith    Level: developer
1583d382aafbSBarry Smith 
1584d382aafbSBarry Smith     Fortran Note:
1585d382aafbSBarry Smith     This routine is not supported in Fortran.
1586d382aafbSBarry Smith 
1587d382aafbSBarry Smith     Concepts: error messages^printing
1588d382aafbSBarry Smith     Concepts: printing^error messages
1589d382aafbSBarry Smith 
1590c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1591d382aafbSBarry Smith M*/
15927087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1593d382aafbSBarry Smith 
1594d382aafbSBarry Smith /*MC
1595d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1596d382aafbSBarry Smith 
1597d382aafbSBarry Smith    Synopsis:
1598d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1599d382aafbSBarry Smith 
1600eca87e8dSBarry Smith     Not Collective
1601eca87e8dSBarry Smith 
1602d382aafbSBarry Smith     Input Parameters:
1603d382aafbSBarry Smith .   format - the usual printf() format string
1604d382aafbSBarry Smith 
1605d382aafbSBarry Smith    Level: developer
1606d382aafbSBarry Smith 
1607d382aafbSBarry Smith     Fortran Note:
1608d382aafbSBarry Smith     This routine is not supported in Fortran.
1609d382aafbSBarry Smith 
1610d382aafbSBarry Smith     Concepts: help messages^printing
1611d382aafbSBarry Smith     Concepts: printing^help messages
1612d382aafbSBarry Smith 
1613d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1614d382aafbSBarry Smith M*/
16157087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1616d382aafbSBarry Smith 
1617fcfd50ebSBarry Smith /*
1618fcfd50ebSBarry Smith      Defines PETSc profiling.
1619fcfd50ebSBarry Smith */
1620fcfd50ebSBarry Smith #include "petsclog.h"
1621fcfd50ebSBarry Smith 
1622fcfd50ebSBarry Smith /*
1623fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1624fcfd50ebSBarry Smith */
1625fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1626fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1627fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1628fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1629fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1630fcfd50ebSBarry Smith #else
1631fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1632fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1633fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1634fcfd50ebSBarry Smith #endif
1635fcfd50ebSBarry Smith 
1636fcfd50ebSBarry Smith /*
1637fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1638fcfd50ebSBarry Smith */
1639fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1640fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1641fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1642fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1643fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1644fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1645257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1646fcfd50ebSBarry Smith 
1647fcfd50ebSBarry Smith 
1648fcfd50ebSBarry Smith 
1649fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1650fcfd50ebSBarry Smith #include <stdarg.h>
1651fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1652fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1653fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
16548c74ee41SBarry Smith extern PetscErrorCode   PetscVFPrintfRegress(FILE*,const char *,va_list);
16558c74ee41SBarry Smith extern PetscErrorCode   PetscVFPrintfRegressSetUp(MPI_Comm,const char *);
1656fcfd50ebSBarry Smith 
1657fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1658fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1659fcfd50ebSBarry Smith #endif
1660fcfd50ebSBarry Smith 
166109573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
166209573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
166309573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1664d382aafbSBarry Smith 
1665d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16667087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16677087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1668d382aafbSBarry Smith #endif
1669d382aafbSBarry Smith 
16707087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16717087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16727087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16737087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16747087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16757087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16767087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1677d382aafbSBarry Smith 
16787087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1679d382aafbSBarry Smith 
1680d382aafbSBarry Smith /*S
1681d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1682d382aafbSBarry Smith 
1683d382aafbSBarry Smith    Level: advanced
1684d382aafbSBarry Smith 
1685d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1686d382aafbSBarry Smith S*/
16877087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1688d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16897087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16907087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1691fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16927087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16937087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1694d382aafbSBarry Smith 
1695d382aafbSBarry Smith /*
1696d382aafbSBarry Smith    For use in debuggers
1697d382aafbSBarry Smith */
16987087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
16997087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
17007087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
17017087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
17027087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1703d382aafbSBarry Smith 
1704d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1705d382aafbSBarry Smith #include <memory.h>
1706d382aafbSBarry Smith #endif
1707d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1708d382aafbSBarry Smith #include <stdlib.h>
1709d382aafbSBarry Smith #endif
1710d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1711d382aafbSBarry Smith #include <strings.h>
1712d382aafbSBarry Smith #endif
1713d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1714d382aafbSBarry Smith #include <string.h>
1715d382aafbSBarry Smith #endif
17166c7e564aSBarry Smith 
17176c7e564aSBarry Smith 
1718d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1719d382aafbSBarry Smith #include <xmmintrin.h>
1720d382aafbSBarry Smith #endif
1721d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1722d382aafbSBarry Smith #include <stdint.h>
1723d382aafbSBarry Smith #endif
1724d382aafbSBarry Smith 
1725fcfd50ebSBarry Smith #undef __FUNCT__
1726fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1727d382aafbSBarry Smith /*@C
1728d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1729d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1730d382aafbSBarry Smith    PetscMemmove() in that case.
1731d382aafbSBarry Smith 
1732d382aafbSBarry Smith    Not Collective
1733d382aafbSBarry Smith 
1734d382aafbSBarry Smith    Input Parameters:
1735d382aafbSBarry Smith +  b - pointer to initial memory space
1736d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1737d382aafbSBarry Smith 
1738d382aafbSBarry Smith    Output Parameter:
1739d382aafbSBarry Smith .  a - pointer to copy space
1740d382aafbSBarry Smith 
1741d382aafbSBarry Smith    Level: intermediate
1742d382aafbSBarry Smith 
1743d382aafbSBarry Smith    Compile Option:
1744d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1745d382aafbSBarry Smith                                   for memory copies on double precision values.
1746d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1747d382aafbSBarry Smith                                   for memory copies on double precision values.
1748d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1749d382aafbSBarry Smith                                   for memory copies on double precision values.
1750d382aafbSBarry Smith 
1751d382aafbSBarry Smith    Note:
1752d382aafbSBarry Smith    This routine is analogous to memcpy().
1753d382aafbSBarry Smith 
1754503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1755503cfb0cSBarry Smith 
1756d382aafbSBarry Smith   Concepts: memory^copying
1757d382aafbSBarry Smith   Concepts: copying^memory
1758d382aafbSBarry Smith 
1759d382aafbSBarry Smith .seealso: PetscMemmove()
1760d382aafbSBarry Smith 
1761d382aafbSBarry Smith @*/
17627087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1763d382aafbSBarry Smith {
1764d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1765d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1766d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1767a7e36092SMatthew G Knepley   PetscFunctionBegin;
1768e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1769e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1770a7e36092SMatthew G Knepley #else
1771d382aafbSBarry Smith   PetscFunctionBegin;
1772a7e36092SMatthew G Knepley #endif
1773d382aafbSBarry Smith   if (a != b) {
1774d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1775d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1776e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1777d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1778d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1779d382aafbSBarry Smith     }
1780d382aafbSBarry Smith #endif
1781d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1782d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1783d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1784d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1785d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1786d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1787d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1788d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1789d382aafbSBarry Smith #else
1790d382aafbSBarry Smith       size_t      i;
1791d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1792d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1793d382aafbSBarry Smith #endif
1794d382aafbSBarry Smith     } else {
1795d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1796d382aafbSBarry Smith     }
1797d382aafbSBarry Smith #else
1798d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1799d382aafbSBarry Smith #endif
1800d382aafbSBarry Smith   }
1801d382aafbSBarry Smith   PetscFunctionReturn(0);
1802d382aafbSBarry Smith }
1803d382aafbSBarry Smith 
1804d382aafbSBarry Smith /*@C
1805d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1806d382aafbSBarry Smith 
1807d382aafbSBarry Smith    Not Collective
1808d382aafbSBarry Smith 
1809d382aafbSBarry Smith    Input Parameters:
1810d382aafbSBarry Smith +  a - pointer to beginning memory location
1811d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1812d382aafbSBarry Smith 
1813d382aafbSBarry Smith    Level: intermediate
1814d382aafbSBarry Smith 
1815d382aafbSBarry Smith    Compile Option:
1816d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1817d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1818d382aafbSBarry Smith 
1819503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1820503cfb0cSBarry Smith 
1821d382aafbSBarry Smith    Concepts: memory^zeroing
1822d382aafbSBarry Smith    Concepts: zeroing^memory
1823d382aafbSBarry Smith 
1824d382aafbSBarry Smith .seealso: PetscMemcpy()
1825d382aafbSBarry Smith @*/
18267087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1827d382aafbSBarry Smith {
1828d382aafbSBarry Smith   if (n > 0) {
1829d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1830e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1831d382aafbSBarry Smith #endif
1832d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1833d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1834d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1835d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1836d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1837d382aafbSBarry Smith     } else {
1838d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1839d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1840d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1841d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1842d382aafbSBarry Smith     } else {
1843d382aafbSBarry Smith #endif
1844d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1845d382aafbSBarry Smith       bzero((char *)a,n);
1846d382aafbSBarry Smith #else
1847d382aafbSBarry Smith       memset((char*)a,0,n);
1848d382aafbSBarry Smith #endif
1849d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1850d382aafbSBarry Smith     }
1851d382aafbSBarry Smith #endif
1852d382aafbSBarry Smith   }
1853d382aafbSBarry Smith   return 0;
1854d382aafbSBarry Smith }
1855d382aafbSBarry Smith 
1856d382aafbSBarry Smith /*MC
1857d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1858d382aafbSBarry Smith 
1859eca87e8dSBarry Smith    Synopsis:
1860eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1861eca87e8dSBarry Smith 
1862d382aafbSBarry Smith    Not Collective
1863d382aafbSBarry Smith 
1864d382aafbSBarry Smith    Input Parameters:
1865d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1866d382aafbSBarry Smith .  n - number of elements to fetch
1867d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
186850d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1869d382aafbSBarry Smith 
1870d382aafbSBarry Smith    Level: developer
1871d382aafbSBarry Smith 
1872d382aafbSBarry Smith    Notes:
1873d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1874d382aafbSBarry Smith 
187550d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
187650d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
187750d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
187863cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
187963cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
188063cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1883d382aafbSBarry Smith    address).
1884d382aafbSBarry Smith 
1885d382aafbSBarry Smith    Concepts: memory
1886d382aafbSBarry Smith M*/
1887d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1888d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1889d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1890d382aafbSBarry Smith   } while (0)
1891d382aafbSBarry Smith 
1892d382aafbSBarry Smith /*
1893e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1894d382aafbSBarry Smith */
1895d382aafbSBarry Smith #include "petscmatlab.h"
1896d382aafbSBarry Smith 
1897d382aafbSBarry Smith /*
1898d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1899d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1900d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1901d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1902e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1903d382aafbSBarry Smith */
1904d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1908d382aafbSBarry Smith #endif
1909d382aafbSBarry Smith 
19105a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
19115a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1912d382aafbSBarry Smith #endif
1913d382aafbSBarry Smith 
1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1916d382aafbSBarry Smith #endif
1917d382aafbSBarry Smith 
1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1920d382aafbSBarry Smith #endif
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1924d382aafbSBarry Smith #endif
1925d382aafbSBarry Smith 
1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1928d382aafbSBarry Smith #endif
1929d382aafbSBarry Smith 
1930d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1931d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1932d382aafbSBarry Smith #endif
1933d382aafbSBarry Smith 
1934d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1935d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1936d382aafbSBarry Smith #endif
1937d382aafbSBarry Smith 
1938d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1939d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1940d382aafbSBarry Smith #endif
1941d382aafbSBarry Smith 
1942d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1943d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1944d382aafbSBarry Smith #endif
1945d382aafbSBarry Smith 
1946d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1947d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1948d382aafbSBarry Smith #endif
1949d382aafbSBarry Smith 
1950d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1951d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1952d382aafbSBarry Smith #endif
1953d382aafbSBarry Smith 
1954d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1955d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1956d382aafbSBarry Smith #endif
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1959d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1960d382aafbSBarry Smith #endif
1961d382aafbSBarry Smith 
1962d382aafbSBarry Smith #endif
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith /*
1965d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1966d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1967d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1968d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1969d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1970d382aafbSBarry Smith */
1971d382aafbSBarry Smith #if defined(__cplusplus)
1972d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1973d382aafbSBarry Smith #define EXTERN_C_END }
1974d382aafbSBarry Smith #else
1975d382aafbSBarry Smith #define EXTERN_C_BEGIN
1976d382aafbSBarry Smith #define EXTERN_C_END
1977d382aafbSBarry Smith #endif
1978d382aafbSBarry Smith 
1979d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1980d382aafbSBarry Smith 
1981d382aafbSBarry Smith /*MC
1982d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1983d382aafbSBarry Smith         communication
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith    Level: beginner
1986d382aafbSBarry Smith 
1987d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1988d382aafbSBarry Smith 
1989d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1990d382aafbSBarry Smith M*/
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith /*MC
1993d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1994d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1995d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1996d382aafbSBarry Smith 
1997d382aafbSBarry Smith 
1998d382aafbSBarry Smith    Level: beginner
1999d382aafbSBarry Smith 
2000d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
2001d382aafbSBarry Smith M*/
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith /*MC
2004d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2005d382aafbSBarry Smith 
2006d382aafbSBarry Smith    Level: beginner
2007d382aafbSBarry Smith 
2008d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
2009d382aafbSBarry Smith M*/
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /*MC
2012d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
2013d382aafbSBarry Smith    Level: beginner
2014d382aafbSBarry Smith 
2015d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2016d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2017d382aafbSBarry Smith 
2018d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2019d382aafbSBarry Smith M*/
2020d382aafbSBarry Smith 
2021d382aafbSBarry Smith /*MC
2022d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2023d382aafbSBarry Smith 
2024d382aafbSBarry Smith    Level: beginner
2025d382aafbSBarry Smith 
2026d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2027d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2028d382aafbSBarry Smith 
2029d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2030d382aafbSBarry Smith M*/
2031d382aafbSBarry Smith 
2032d382aafbSBarry Smith /*MC
2033d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2034d382aafbSBarry Smith 
2035d382aafbSBarry Smith    Level: beginner
2036d382aafbSBarry Smith 
2037d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2038d382aafbSBarry Smith           pass this value
2039d382aafbSBarry Smith 
2040d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2041d382aafbSBarry Smith M*/
2042d382aafbSBarry Smith 
2043d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2044d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2045d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2046d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2047d382aafbSBarry Smith #else
2048d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2049d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2050d382aafbSBarry Smith #endif
2051d382aafbSBarry Smith #endif
2052d382aafbSBarry Smith 
2053d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2054d382aafbSBarry Smith 
2055d382aafbSBarry Smith /* Limit MPI to 32-bits */
2056d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2057d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2058d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2059d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2060d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2061d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2062d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2063d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2064d382aafbSBarry Smith 
2065d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2066e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2067e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2068eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2069eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2070d382aafbSBarry Smith 
2071d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2072e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2073eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2074d382aafbSBarry Smith #else
2075d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2076d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2077d382aafbSBarry Smith #endif
2078d382aafbSBarry Smith 
2079d382aafbSBarry Smith #else
2080d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2081d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2082d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2083d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2084d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2085d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2086d382aafbSBarry Smith #endif
2087d382aafbSBarry Smith 
2088d382aafbSBarry Smith 
2089d382aafbSBarry Smith /*
2090d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2091d382aafbSBarry Smith    as a regular user variable.
2092d382aafbSBarry Smith */
2093d382aafbSBarry Smith #if defined(hz)
2094d382aafbSBarry Smith #undef hz
2095d382aafbSBarry Smith #endif
2096d382aafbSBarry Smith 
2097d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2098d382aafbSBarry Smith 
2099d382aafbSBarry Smith 
2100d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2101d382aafbSBarry Smith #include <limits.h>
2102d382aafbSBarry Smith #endif
2103d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2104d382aafbSBarry Smith #include <sys/param.h>
2105d382aafbSBarry Smith #endif
2106d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2107d382aafbSBarry Smith #include <sys/types.h>
2108d382aafbSBarry Smith #endif
2109d382aafbSBarry Smith #if defined(MAXPATHLEN)
2110d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2111d382aafbSBarry Smith #elif defined(MAX_PATH)
2112d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2113d382aafbSBarry Smith #elif defined(_MAX_PATH)
2114d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2115d382aafbSBarry Smith #else
2116d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2117d382aafbSBarry Smith #endif
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith /* Special support for C++ */
2120d382aafbSBarry Smith #include "petscsys.hh"
21216c7e564aSBarry Smith 
2122d382aafbSBarry Smith 
2123d382aafbSBarry Smith /*MC
2124d382aafbSBarry Smith 
2125d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2126d382aafbSBarry Smith 
2127d382aafbSBarry Smith $    1) classic Fortran 77 style
2128d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2129d382aafbSBarry Smith $       XXX variablename
2130d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2131d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2132d382aafbSBarry Smith $
2133d382aafbSBarry Smith $    2) classic Fortran 90 style
2134d1716517SSatish Balay $#include "finclude/petscXXX.h"
2135d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2136d382aafbSBarry Smith $       XXX variablename
2137d382aafbSBarry Smith $
2138d382aafbSBarry Smith $    3) Using Fortran modules
2139d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2140d382aafbSBarry Smith $         use petscXXXX
2141d382aafbSBarry Smith $       XXX variablename
2142d382aafbSBarry Smith $
2143d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2144d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2145d382aafbSBarry Smith $         use petscXXXX
2146d382aafbSBarry Smith $       type(XXX) variablename
2147e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2148d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2149d382aafbSBarry Smith 
2150d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2151d382aafbSBarry Smith 
2152d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2153d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2154d382aafbSBarry Smith $        integer variablename
2155d382aafbSBarry Smith $
2156d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2157d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2158d382aafbSBarry Smith 
2159d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2160d382aafbSBarry Smith for only a few PETSc functions.
2161d382aafbSBarry Smith 
2162d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2163d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2164d382aafbSBarry Smith you cannot have something like
2165d382aafbSBarry Smith $      PetscInt row,col
2166d382aafbSBarry Smith $      PetscScalar val
2167d382aafbSBarry Smith $        ...
2168d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2169d382aafbSBarry Smith You must instead have
2170d382aafbSBarry Smith $      PetscInt row(1),col(1)
2171d382aafbSBarry Smith $      PetscScalar val(1)
2172d382aafbSBarry Smith $        ...
2173d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2174d382aafbSBarry Smith 
2175d382aafbSBarry Smith 
2176d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2177d382aafbSBarry Smith 
2178d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2179d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2180d382aafbSBarry Smith 
2181d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2182d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2183d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2184d382aafbSBarry Smith 
2185d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2186e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2187d382aafbSBarry Smith 
2188d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2189d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2190d382aafbSBarry Smith 
2191d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2192d382aafbSBarry Smith      automatically by "make allfortranstubs".
2193d382aafbSBarry Smith 
2194e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2195d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2196d382aafbSBarry Smith      include their predecessors
2197d382aafbSBarry Smith 
2198d382aafbSBarry Smith     Level: beginner
2199d382aafbSBarry Smith 
2200d382aafbSBarry Smith M*/
2201d382aafbSBarry Smith 
22027087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
22037087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
22047087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
22057087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
22067087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
22077087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2208d382aafbSBarry Smith 
22097087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
22107087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
22117087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
22127087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
22137087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2214*d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
22157087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22167087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22177087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22187087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22197087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22207087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22217087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
22229b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2223d382aafbSBarry Smith 
22247087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22257087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2226d382aafbSBarry Smith 
222776bdecfbSBarry Smith /*J
2228d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2229d382aafbSBarry Smith        with an optional dynamic library name, for example
2230d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2231d382aafbSBarry Smith 
2232d382aafbSBarry Smith    Level: beginner
2233d382aafbSBarry Smith 
2234e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2235d382aafbSBarry Smith    with the option --download-sprng
2236d382aafbSBarry Smith 
2237d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
223876bdecfbSBarry Smith J*/
2239d382aafbSBarry Smith #define PetscRandomType char*
2240d382aafbSBarry Smith #define PETSCRAND       "rand"
2241d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2242d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2243d382aafbSBarry Smith 
2244d382aafbSBarry Smith /* Logging support */
22457087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2246d382aafbSBarry Smith 
22477087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2248d382aafbSBarry Smith 
2249d382aafbSBarry Smith /*S
2250d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2251d382aafbSBarry Smith 
2252d382aafbSBarry Smith    Level: intermediate
2253d382aafbSBarry Smith 
2254d382aafbSBarry Smith   Concepts: random numbers
2255d382aafbSBarry Smith 
2256d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2257d382aafbSBarry Smith S*/
2258d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2259d382aafbSBarry Smith 
2260d382aafbSBarry Smith /* Dynamic creation and loading functions */
2261d382aafbSBarry Smith extern PetscFList PetscRandomList;
2262ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2263d382aafbSBarry Smith 
22647087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22657087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22667087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22677087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22687087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22697087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22707087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22717087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2272d382aafbSBarry Smith 
2273d382aafbSBarry Smith /*MC
2274d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2275d382aafbSBarry Smith 
2276d382aafbSBarry Smith   Synopsis:
22771890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2278d382aafbSBarry Smith 
2279d382aafbSBarry Smith   Not Collective
2280d382aafbSBarry Smith 
2281d382aafbSBarry Smith   Input Parameters:
2282d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2283d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2284d382aafbSBarry Smith . func_name   - The name of routine to create method context
2285d382aafbSBarry Smith - create_func - The creation routine itself
2286d382aafbSBarry Smith 
2287d382aafbSBarry Smith   Notes:
2288d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2289d382aafbSBarry Smith 
2290d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2291d382aafbSBarry Smith 
2292d382aafbSBarry Smith   Sample usage:
2293d382aafbSBarry Smith .vb
2294d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2295d382aafbSBarry Smith .ve
2296d382aafbSBarry Smith 
2297d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2298d382aafbSBarry Smith .vb
2299d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2300d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2301d382aafbSBarry Smith .ve
2302d382aafbSBarry Smith    or at runtime via the option
2303d382aafbSBarry Smith .vb
2304d382aafbSBarry Smith     -random_type my_random_name
2305d382aafbSBarry Smith .ve
2306d382aafbSBarry Smith 
2307d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2308d382aafbSBarry Smith 
2309d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2310d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2311d382aafbSBarry Smith 
2312d382aafbSBarry Smith   Level: advanced
2313d382aafbSBarry Smith 
2314d382aafbSBarry Smith .keywords: PetscRandom, register
2315d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2316d382aafbSBarry Smith M*/
2317d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2318d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2319d382aafbSBarry Smith #else
2320d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2321d382aafbSBarry Smith #endif
2322d382aafbSBarry Smith 
23237087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23247087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23257087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23267087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23277087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23287087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23297087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23307087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2331fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2332d382aafbSBarry Smith 
23337087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23347087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23357087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23367087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23377087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23387087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23397087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2340d382aafbSBarry Smith 
23417087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23427087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23437087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23447087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23457087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23467087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23477087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23487087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23497087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23507087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23517087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23527087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23537087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2354d382aafbSBarry Smith 
2355d382aafbSBarry Smith /*
2356d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2357d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2358d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2359d382aafbSBarry Smith   PetscBinarySeek().
2360d382aafbSBarry Smith */
2361d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2362d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2363d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2364d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2365d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2366d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2367d382aafbSBarry Smith 
2368d382aafbSBarry Smith /*E
2369d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2370d382aafbSBarry Smith 
2371d382aafbSBarry Smith   Level: advanced
2372d382aafbSBarry Smith 
2373d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2374d382aafbSBarry Smith E*/
2375d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23767087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23777087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2378d382aafbSBarry Smith 
23797087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23807087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23817087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23827087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
23837087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23847087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2385d382aafbSBarry Smith 
23867087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23877087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23887087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23897087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23907087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2391d382aafbSBarry Smith 
23927087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2393d382aafbSBarry Smith 
2394d382aafbSBarry Smith /*E
2395d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2396d382aafbSBarry Smith 
2397d382aafbSBarry Smith   Level: beginner
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2400d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2401d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2402d382aafbSBarry Smith E*/
240311f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith /*MC
2406d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2407d382aafbSBarry Smith 
2408d382aafbSBarry Smith     Level: beginner
2409d382aafbSBarry Smith 
2410d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2411eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2412eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith M*/
2415d382aafbSBarry Smith 
2416d382aafbSBarry Smith /*MC
2417d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2418d382aafbSBarry Smith                 value into that location
2419d382aafbSBarry Smith 
2420d382aafbSBarry Smith     Level: beginner
2421d382aafbSBarry Smith 
2422d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2423eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2424eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2425d382aafbSBarry Smith 
2426d382aafbSBarry Smith M*/
2427d382aafbSBarry Smith 
2428d382aafbSBarry Smith /*MC
2429d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2430d382aafbSBarry Smith 
2431d382aafbSBarry Smith     Level: beginner
2432d382aafbSBarry Smith 
2433d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2434d382aafbSBarry Smith 
2435d382aafbSBarry Smith M*/
2436d382aafbSBarry Smith 
2437d382aafbSBarry Smith /*S
2438d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2439d382aafbSBarry Smith 
2440d382aafbSBarry Smith    Level: advanced
2441d382aafbSBarry Smith 
2442d382aafbSBarry Smith    Concepts: communicator, create
2443d382aafbSBarry Smith S*/
2444d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2445d382aafbSBarry Smith 
2446d382aafbSBarry Smith struct _n_PetscSubcomm {
2447d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2448d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2449d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2450d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2451d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2452d382aafbSBarry Smith };
2453d382aafbSBarry Smith 
2454638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2455638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2456638faf0bSHong Zhang 
24577087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2458fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24597087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24607087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24617087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2462d382aafbSBarry Smith 
246382a7e548SBarry Smith #include <petscctable.h>
246482a7e548SBarry Smith 
2465d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24666c7e564aSBarry Smith 
24679e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24689e03d832SJed Brown #undef __FUNCT__
24699e03d832SJed Brown #define __FUNCT__ "User provided function"
24709e03d832SJed Brown 
2471d382aafbSBarry Smith #endif
2472