1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 73ca90d2dSJacob Faibussowitsch 8d382aafbSBarry Smith /* ========================================================================== */ 9d382aafbSBarry Smith /* 10d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 111c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 121c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 131c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 141cc8b206SBarry Smith directory as the other PETSc include files. 15d382aafbSBarry Smith */ 162c8e378dSBarry Smith #include <petscconf.h> 171c77a0c5SBarry Smith #include <petscconf_poison.h> 182c8e378dSBarry Smith #include <petscfix.h> 19bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2033bb201bSJacob Faibussowitsch 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith 44d382aafbSBarry Smith /* 45d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 46d382aafbSBarry Smith 47d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 48d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 49d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 50d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 51d382aafbSBarry Smith mpicxx.h directly in their code 52d382aafbSBarry Smith */ 53fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 54d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 55fa9e63e2SJed Brown #endif 56fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 57d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 58fa9e63e2SJed Brown #endif 59e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 60e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 61e771154cSJed Brown #else 622c8e378dSBarry Smith # include <mpi.h> 63e771154cSJed Brown #endif 6465013866SBarry Smith 65d382aafbSBarry Smith /* 66a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 67a7886beaSBarry Smith This usually happens because 68a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 69a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 70a7886beaSBarry Smith */ 71a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 72c9b973beSBarry Smith # if !defined(MPIUNI_H) 73a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 74a7886beaSBarry Smith # endif 7541f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 7641f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 7741f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 7841f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 7941f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8041f4af4cSSatish Balay # endif 8141f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8241f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 8341f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8441f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8541f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 8641f4af4cSSatish Balay # endif 87a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 8841f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 89a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 90ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 91a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 92a7886beaSBarry Smith # endif 93a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 94a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 95a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 96ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 97c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 98a7886beaSBarry Smith # endif 99c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "p" 100c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "p" 101d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 102d97fd468SStefano Zampini # if !defined(MSMPI_VER) 103d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 104d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 105d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 106d97fd468SStefano Zampini # endif 107d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 108d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 109a7886beaSBarry Smith #endif 110a7886beaSBarry Smith 111c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 112c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 113c93fae50SJacob Faibussowitsch # define PETSC_MPI_COMM_FMT "d" 114c93fae50SJacob Faibussowitsch #endif 115c93fae50SJacob Faibussowitsch 116c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 117c93fae50SJacob Faibussowitsch # define PETSC_MPI_WIN_FMT "d" 118c93fae50SJacob Faibussowitsch #endif 119c93fae50SJacob Faibussowitsch 120a7886beaSBarry Smith /* 1212981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 122d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 123d382aafbSBarry Smith */ 124d382aafbSBarry Smith #include <stdio.h> 125d382aafbSBarry Smith 126d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 127d382aafbSBarry Smith #if !defined(MPIAPI) 128d382aafbSBarry Smith #define MPIAPI 129d382aafbSBarry Smith #endif 130d382aafbSBarry Smith 1311cc8b206SBarry Smith /* 1321cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1331cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1341cc8b206SBarry Smith does not match the actual type of the argument being passed in 1351cc8b206SBarry Smith */ 136c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 137894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 138894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1398ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1408ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 141894dd566SJed Brown # endif 142894dd566SJed Brown #endif 143894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 144894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 1458ad47952SJed Brown # define PetscAttrMPITypeTag(type) 1468ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 147894dd566SJed Brown #endif 148b3506946SBarry Smith 1495a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 150df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 151e28ce29aSPatrick Sanan 152e28ce29aSPatrick Sanan /*MC 153e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 154e28ce29aSPatrick Sanan 155e28ce29aSPatrick Sanan Notes: 156e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 157e28ce29aSPatrick Sanan 158e28ce29aSPatrick Sanan Level: beginner 159e28ce29aSPatrick Sanan 160*db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 161e28ce29aSPatrick Sanan M*/ 162e28ce29aSPatrick Sanan 1637cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 164b7b8f77aSBarry Smith 165d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 166bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 167a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 168d382aafbSBarry Smith #else 169d382aafbSBarry Smith # define MPIU_INT MPI_INT 170a05e1a72SSatish Balay # define PetscInt_FMT "d" 171d382aafbSBarry Smith #endif 172d382aafbSBarry Smith 173503cfb0cSBarry Smith /* 174503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 175503cfb0cSBarry Smith */ 176e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 177d382aafbSBarry Smith 178d382aafbSBarry Smith /* 179d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 180d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 181d382aafbSBarry Smith */ 182014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 183d382aafbSBarry Smith 184d382aafbSBarry Smith /* 185d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 186d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 187d382aafbSBarry Smith */ 188014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 189d382aafbSBarry Smith 190c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 191c8b9133aSSatish Balay 1925c993f7fSStefano Zampini #if defined(__NEC__) 1935c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 1945c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 195c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 1961dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 197c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 198e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 199e5518150SSatish Balay # if defined(_MSC_VER) 200160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 201e5518150SSatish Balay # else 202e5518150SSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 203e5518150SSatish Balay # endif 204c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 205c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 206c8b9133aSSatish Balay #else 207c8b9133aSSatish Balay # define PetscPragmaSIMD 208c8b9133aSSatish Balay #endif 209c8b9133aSSatish Balay 210d382aafbSBarry Smith /* 211d382aafbSBarry Smith Declare extern C stuff after including external header files 212d382aafbSBarry Smith */ 213d382aafbSBarry Smith 2146a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 21570b3c8c7SBarry Smith 2166edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 2178b49ba18SBarry Smith /* 218390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 2198b49ba18SBarry Smith */ 2208b49ba18SBarry Smith #include <petscmath.h> 2218b49ba18SBarry Smith 2226a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 223d382aafbSBarry Smith 224d382aafbSBarry Smith /*MC 2250298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 226d382aafbSBarry Smith 227d382aafbSBarry Smith Level: beginner 228d382aafbSBarry Smith 229e28ce29aSPatrick Sanan Note: 230e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 231d382aafbSBarry Smith some default 232d382aafbSBarry Smith 233e28ce29aSPatrick Sanan Fortran Notes: 234e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 235d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 236d382aafbSBarry Smith 237*db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 238d382aafbSBarry Smith 239d382aafbSBarry Smith M*/ 2400298fd71SBarry Smith #define PETSC_IGNORE NULL 241d382aafbSBarry Smith 242c528d872SBarry Smith /* This is deprecated */ 243c528d872SBarry Smith #define PETSC_NULL NULL 244c528d872SBarry Smith 245d382aafbSBarry Smith /*MC 246557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 247557d4da8SBarry Smith where you wish PETSc to use the default. 248557d4da8SBarry Smith 249557d4da8SBarry Smith Level: beginner 250557d4da8SBarry Smith 251*db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 252557d4da8SBarry Smith 253557d4da8SBarry Smith M*/ 254557d4da8SBarry Smith #define PETSC_DECIDE -1 255557d4da8SBarry Smith 256557d4da8SBarry Smith /*MC 257d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 258d382aafbSBarry Smith where you wish PETSc to compute the required value. 259d382aafbSBarry Smith 260d382aafbSBarry Smith Level: beginner 261d382aafbSBarry Smith 262e28ce29aSPatrick Sanan Developer Note: 263e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 264557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 265557d4da8SBarry Smith 266*db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 267d382aafbSBarry Smith 268d382aafbSBarry Smith M*/ 269d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 270d382aafbSBarry Smith 271d382aafbSBarry Smith /*MC 272557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 273557d4da8SBarry Smith where you wish PETSc to use the default. 274557d4da8SBarry Smith 275557d4da8SBarry Smith Level: beginner 276557d4da8SBarry Smith 277e28ce29aSPatrick Sanan Fortran Notes: 278e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 279557d4da8SBarry Smith 280*db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 281557d4da8SBarry Smith 282557d4da8SBarry Smith M*/ 283557d4da8SBarry Smith #define PETSC_DEFAULT -2 284557d4da8SBarry Smith 285557d4da8SBarry Smith /*MC 286d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 287ea8fe74dSBarry Smith all the processes that PETSc knows about. 288d382aafbSBarry Smith 289d382aafbSBarry Smith Level: beginner 290d382aafbSBarry Smith 291e28ce29aSPatrick Sanan Notes: 292e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 293d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 294d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 295a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 296a990b902SBarry Smith 297a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 298a990b902SBarry Smith is called because it may not have a valid value yet. 299d382aafbSBarry Smith 300*db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 301d382aafbSBarry Smith 302d382aafbSBarry Smith M*/ 303014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 304d382aafbSBarry Smith 305d382aafbSBarry Smith /*MC 306503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 307d382aafbSBarry Smith 308d382aafbSBarry Smith Level: beginner 309d382aafbSBarry Smith 310e28ce29aSPatrick Sanan Notes: 311e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 312a990b902SBarry Smith 313*db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 314d382aafbSBarry Smith 315d382aafbSBarry Smith M*/ 316d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 317d382aafbSBarry Smith 3186de5d289SStefano Zampini /*MC 3196de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 3206de5d289SStefano Zampini MPI with MPI_Init_thread. 3216de5d289SStefano Zampini 3226de5d289SStefano Zampini Level: beginner 3236de5d289SStefano Zampini 3246de5d289SStefano Zampini Notes: 3256de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 3266de5d289SStefano Zampini 327*db781477SPatrick Sanan .seealso: `PetscInitialize()` 3286de5d289SStefano Zampini 3296de5d289SStefano Zampini M*/ 3306de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3316de5d289SStefano Zampini 332d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3338ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 334014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 335014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3364cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 337d382aafbSBarry Smith 338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 34157f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm,MPI_Comm*); 34257f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm,MPI_Comm*); 343d382aafbSBarry Smith 34459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 34559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 34659e55d94SJunchao Zhang #endif 34759e55d94SJunchao Zhang 34871438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 34971438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 35071438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 35171438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 35271438e86SJunchao Zhang #endif 35371438e86SJunchao Zhang 354540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 355540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 356540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 357540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 358540e20f2SPierre Jolivet #endif 359540e20f2SPierre Jolivet 360d382aafbSBarry Smith /*MC 36195dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 362d382aafbSBarry Smith 363eca87e8dSBarry Smith Synopsis: 364aaa7dc30SBarry Smith #include <petscsys.h> 365eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 366eca87e8dSBarry Smith 367eca87e8dSBarry Smith Not Collective 368eca87e8dSBarry Smith 369d382aafbSBarry Smith Input Parameter: 370d382aafbSBarry Smith . m - number of bytes to allocate 371d382aafbSBarry Smith 372d382aafbSBarry Smith Output Parameter: 373d382aafbSBarry Smith . result - memory allocated 374d382aafbSBarry Smith 375d382aafbSBarry Smith Level: beginner 376d382aafbSBarry Smith 37749d7da52SJed Brown Notes: 37849d7da52SJed Brown Memory is always allocated at least double aligned 379d382aafbSBarry Smith 38049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 381d382aafbSBarry Smith 382*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 383d382aafbSBarry Smith 384d382aafbSBarry Smith M*/ 385071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 386d382aafbSBarry Smith 387d382aafbSBarry Smith /*MC 3883221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 3893221ece2SMatthew G. Knepley 3903221ece2SMatthew G. Knepley Synopsis: 3913221ece2SMatthew G. Knepley #include <petscsys.h> 3923221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3933221ece2SMatthew G. Knepley 3943221ece2SMatthew G. Knepley Not Collective 3953221ece2SMatthew G. Knepley 3963221ece2SMatthew G. Knepley Input Parameters: 3973221ece2SMatthew G. Knepley + m - number of bytes to allocate 39892f119d6SBarry Smith - result - previous memory 3993221ece2SMatthew G. Knepley 4003221ece2SMatthew G. Knepley Output Parameter: 4013221ece2SMatthew G. Knepley . result - new memory allocated 4023221ece2SMatthew G. Knepley 4033221ece2SMatthew G. Knepley Level: developer 4043221ece2SMatthew G. Knepley 4053221ece2SMatthew G. Knepley Notes: 4063221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4073221ece2SMatthew G. Knepley 408*db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 4093221ece2SMatthew G. Knepley 4103221ece2SMatthew G. Knepley M*/ 4113221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4123221ece2SMatthew G. Knepley 4133221ece2SMatthew G. Knepley /*MC 414503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 415d382aafbSBarry Smith 416d382aafbSBarry Smith Synopsis: 417aaa7dc30SBarry Smith #include <petscsys.h> 418d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 419d382aafbSBarry Smith 420eca87e8dSBarry Smith Not Collective 421eca87e8dSBarry Smith 422eca87e8dSBarry Smith Input Parameters: 423eca87e8dSBarry Smith . addr - address to align (any pointer type) 424eca87e8dSBarry Smith 425d382aafbSBarry Smith Level: developer 426d382aafbSBarry Smith 427*db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 430d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 431d382aafbSBarry Smith 432d382aafbSBarry Smith /*MC 4338f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 4348f51dc47SJunchao Zhang 4358f51dc47SJunchao Zhang Synopsis: 4368f51dc47SJunchao Zhang #include <petscsys.h> 4378f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4388f51dc47SJunchao Zhang 4398f51dc47SJunchao Zhang Not Collective 4408f51dc47SJunchao Zhang 4418f51dc47SJunchao Zhang Input Parameter: 4428f51dc47SJunchao Zhang . m - number of bytes to allocate 4438f51dc47SJunchao Zhang 4448f51dc47SJunchao Zhang Output Parameter: 4458f51dc47SJunchao Zhang . result - memory allocated 4468f51dc47SJunchao Zhang 4478f51dc47SJunchao Zhang Level: beginner 4488f51dc47SJunchao Zhang 4498f51dc47SJunchao Zhang Notes: 4508f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4518f51dc47SJunchao Zhang 4528f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4538f51dc47SJunchao Zhang 454*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4558f51dc47SJunchao Zhang 4568f51dc47SJunchao Zhang M*/ 45766122d6dSBarry Smith #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m),(result)) 4588f51dc47SJunchao Zhang 4598f51dc47SJunchao Zhang /*MC 460785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 461d382aafbSBarry Smith 462eca87e8dSBarry Smith Synopsis: 463aaa7dc30SBarry Smith #include <petscsys.h> 464785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 465785e854fSJed Brown 466785e854fSJed Brown Not Collective 467785e854fSJed Brown 468785e854fSJed Brown Input Parameter: 469390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 470785e854fSJed Brown 471785e854fSJed Brown Output Parameter: 4721fe1b817SJunchao Zhang . r1 - memory allocated 473785e854fSJed Brown 474e28ce29aSPatrick Sanan Note: 475e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 476390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 477390e1bf2SBarry Smith $ PetscInt *id; 478390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 479390e1bf2SBarry Smith not 480390e1bf2SBarry Smith $ PetscInt *id; 481390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 482390e1bf2SBarry Smith 4831fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 484390e1bf2SBarry Smith 485390e1bf2SBarry Smith Level: beginner 486785e854fSJed Brown 487*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 488785e854fSJed Brown 489785e854fSJed Brown M*/ 49066122d6dSBarry Smith #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1)) 491785e854fSJed Brown 492785e854fSJed Brown /*MC 4931795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 4941795a4d1SJed Brown 4951795a4d1SJed Brown Synopsis: 496aaa7dc30SBarry Smith #include <petscsys.h> 4971795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4981795a4d1SJed Brown 4991795a4d1SJed Brown Not Collective 5001795a4d1SJed Brown 5011795a4d1SJed Brown Input Parameter: 5021795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5031795a4d1SJed Brown 5041795a4d1SJed Brown Output Parameter: 5051fe1b817SJunchao Zhang . r1 - memory allocated 5061795a4d1SJed Brown 507e28ce29aSPatrick Sanan Notes: 508e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 509390e1bf2SBarry Smith 510390e1bf2SBarry Smith Level: beginner 5111795a4d1SJed Brown 512*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 5131795a4d1SJed Brown 5141795a4d1SJed Brown M*/ 51566122d6dSBarry Smith #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1)) 5161795a4d1SJed Brown 5171795a4d1SJed Brown /*MC 518dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 519d382aafbSBarry Smith 520eca87e8dSBarry Smith Synopsis: 521aaa7dc30SBarry Smith #include <petscsys.h> 522dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 523eca87e8dSBarry Smith 524eca87e8dSBarry Smith Not Collective 525eca87e8dSBarry Smith 526d8d19677SJose E. Roman Input Parameters: 527d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 528dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 529d382aafbSBarry Smith 530d8d19677SJose E. Roman Output Parameters: 531d382aafbSBarry Smith + r1 - memory allocated in first chunk 532d382aafbSBarry Smith - r2 - memory allocated in second chunk 533d382aafbSBarry Smith 534d382aafbSBarry Smith Level: developer 535d382aafbSBarry Smith 536*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 537d382aafbSBarry Smith 538d382aafbSBarry Smith M*/ 53966122d6dSBarry Smith #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2)) 540d382aafbSBarry Smith 541d382aafbSBarry Smith /*MC 5421795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 543d382aafbSBarry Smith 544eca87e8dSBarry Smith Synopsis: 545aaa7dc30SBarry Smith #include <petscsys.h> 5461795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 547eca87e8dSBarry Smith 548eca87e8dSBarry Smith Not Collective 549eca87e8dSBarry Smith 550d8d19677SJose E. Roman Input Parameters: 551d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5521795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5531795a4d1SJed Brown 554d8d19677SJose E. Roman Output Parameters: 5551795a4d1SJed Brown + r1 - memory allocated in first chunk 5561795a4d1SJed Brown - r2 - memory allocated in second chunk 5571795a4d1SJed Brown 5581795a4d1SJed Brown Level: developer 5591795a4d1SJed Brown 560*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5611795a4d1SJed Brown 5621795a4d1SJed Brown M*/ 56366122d6dSBarry Smith #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2)) 5641795a4d1SJed Brown 5651795a4d1SJed Brown /*MC 566dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 567d382aafbSBarry Smith 568d382aafbSBarry Smith Synopsis: 569aaa7dc30SBarry Smith #include <petscsys.h> 570dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 571d382aafbSBarry Smith 572d382aafbSBarry Smith Not Collective 573d382aafbSBarry Smith 574d8d19677SJose E. Roman Input Parameters: 575d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 576d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 577dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 578d382aafbSBarry Smith 579d8d19677SJose E. Roman Output Parameters: 580d382aafbSBarry Smith + r1 - memory allocated in first chunk 581d382aafbSBarry Smith . r2 - memory allocated in second chunk 582d382aafbSBarry Smith - r3 - memory allocated in third chunk 583d382aafbSBarry Smith 584d382aafbSBarry Smith Level: developer 585d382aafbSBarry Smith 586*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 587d382aafbSBarry Smith 588d382aafbSBarry Smith M*/ 58966122d6dSBarry Smith #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3)) 590d382aafbSBarry Smith 591d382aafbSBarry Smith /*MC 5921795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 593d382aafbSBarry Smith 594eca87e8dSBarry Smith Synopsis: 595aaa7dc30SBarry Smith #include <petscsys.h> 5961795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 597eca87e8dSBarry Smith 598eca87e8dSBarry Smith Not Collective 599eca87e8dSBarry Smith 600d8d19677SJose E. Roman Input Parameters: 601d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 602d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6031795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6041795a4d1SJed Brown 605d8d19677SJose E. Roman Output Parameters: 6061795a4d1SJed Brown + r1 - memory allocated in first chunk 6071795a4d1SJed Brown . r2 - memory allocated in second chunk 6081795a4d1SJed Brown - r3 - memory allocated in third chunk 6091795a4d1SJed Brown 6101795a4d1SJed Brown Level: developer 6111795a4d1SJed Brown 612*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 6131795a4d1SJed Brown 6141795a4d1SJed Brown M*/ 61566122d6dSBarry Smith #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3)) 6161795a4d1SJed Brown 6171795a4d1SJed Brown /*MC 618dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 619d382aafbSBarry Smith 620d382aafbSBarry Smith Synopsis: 621aaa7dc30SBarry Smith #include <petscsys.h> 622dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 623d382aafbSBarry Smith 624d382aafbSBarry Smith Not Collective 625d382aafbSBarry Smith 626d8d19677SJose E. Roman Input Parameters: 627d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 628d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 629d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 630dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 631d382aafbSBarry Smith 632d8d19677SJose E. Roman Output Parameters: 633d382aafbSBarry Smith + r1 - memory allocated in first chunk 634d382aafbSBarry Smith . r2 - memory allocated in second chunk 635d382aafbSBarry Smith . r3 - memory allocated in third chunk 636d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 637d382aafbSBarry Smith 638d382aafbSBarry Smith Level: developer 639d382aafbSBarry Smith 640*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 641d382aafbSBarry Smith 642d382aafbSBarry Smith M*/ 64366122d6dSBarry Smith #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4)) 644d382aafbSBarry Smith 645d382aafbSBarry Smith /*MC 6461795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 647d382aafbSBarry Smith 648eca87e8dSBarry Smith Synopsis: 649aaa7dc30SBarry Smith #include <petscsys.h> 6501795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 651eca87e8dSBarry Smith 652eca87e8dSBarry Smith Not Collective 653eca87e8dSBarry Smith 654e28ce29aSPatrick Sanan Input Parameters: 655d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 656d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 657d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6581795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6591795a4d1SJed Brown 660e28ce29aSPatrick Sanan Output Parameters: 6611795a4d1SJed Brown + r1 - memory allocated in first chunk 6621795a4d1SJed Brown . r2 - memory allocated in second chunk 6631795a4d1SJed Brown . r3 - memory allocated in third chunk 6641795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6651795a4d1SJed Brown 6661795a4d1SJed Brown Level: developer 6671795a4d1SJed Brown 668*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6691795a4d1SJed Brown 6701795a4d1SJed Brown M*/ 67166122d6dSBarry Smith #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4)) 6721795a4d1SJed Brown 6731795a4d1SJed Brown /*MC 674dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 675d382aafbSBarry Smith 676d382aafbSBarry Smith Synopsis: 677aaa7dc30SBarry Smith #include <petscsys.h> 678dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 679d382aafbSBarry Smith 680d382aafbSBarry Smith Not Collective 681d382aafbSBarry Smith 682e28ce29aSPatrick Sanan Input Parameters: 683d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 684d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 685d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 686d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 687dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 688d382aafbSBarry Smith 689e28ce29aSPatrick Sanan Output Parameters: 690d382aafbSBarry Smith + r1 - memory allocated in first chunk 691d382aafbSBarry Smith . r2 - memory allocated in second chunk 692d382aafbSBarry Smith . r3 - memory allocated in third chunk 693d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 694d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 695d382aafbSBarry Smith 696d382aafbSBarry Smith Level: developer 697d382aafbSBarry Smith 698*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 699d382aafbSBarry Smith 700d382aafbSBarry Smith M*/ 70166122d6dSBarry Smith #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5)) 702d382aafbSBarry Smith 703d382aafbSBarry Smith /*MC 7041795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 705d382aafbSBarry Smith 706eca87e8dSBarry Smith Synopsis: 707aaa7dc30SBarry Smith #include <petscsys.h> 7081795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 709eca87e8dSBarry Smith 710eca87e8dSBarry Smith Not Collective 711eca87e8dSBarry Smith 712e28ce29aSPatrick Sanan Input Parameters: 713d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 714d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 715d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 716d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7171795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7181795a4d1SJed Brown 719e28ce29aSPatrick Sanan Output Parameters: 7201795a4d1SJed Brown + r1 - memory allocated in first chunk 7211795a4d1SJed Brown . r2 - memory allocated in second chunk 7221795a4d1SJed Brown . r3 - memory allocated in third chunk 7231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7241795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7251795a4d1SJed Brown 7261795a4d1SJed Brown Level: developer 7271795a4d1SJed Brown 728*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7291795a4d1SJed Brown 7301795a4d1SJed Brown M*/ 73166122d6dSBarry Smith #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5)) 732d382aafbSBarry Smith 733d382aafbSBarry Smith /*MC 734dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 735d382aafbSBarry Smith 736d382aafbSBarry Smith Synopsis: 737aaa7dc30SBarry Smith #include <petscsys.h> 738dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 739d382aafbSBarry Smith 740d382aafbSBarry Smith Not Collective 741d382aafbSBarry Smith 742e28ce29aSPatrick Sanan Input Parameters: 743d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 744d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 745d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 746d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 747d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 748dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 749d382aafbSBarry Smith 750e28ce29aSPatrick Sanan Output Parameteasr: 751d382aafbSBarry Smith + r1 - memory allocated in first chunk 752d382aafbSBarry Smith . r2 - memory allocated in second chunk 753d382aafbSBarry Smith . r3 - memory allocated in third chunk 754d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 755d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 756d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 757d382aafbSBarry Smith 758d382aafbSBarry Smith Level: developer 759d382aafbSBarry Smith 760*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 761d382aafbSBarry Smith 762d382aafbSBarry Smith M*/ 76366122d6dSBarry Smith #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6)) 764d382aafbSBarry Smith 765d382aafbSBarry Smith /*MC 7661795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 767d382aafbSBarry Smith 768eca87e8dSBarry Smith Synopsis: 769aaa7dc30SBarry Smith #include <petscsys.h> 7701795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 771eca87e8dSBarry Smith 772eca87e8dSBarry Smith Not Collective 773eca87e8dSBarry Smith 774e28ce29aSPatrick Sanan Input Parameters: 775d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 776d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 777d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 778d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 779d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7801795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7811795a4d1SJed Brown 782e28ce29aSPatrick Sanan Output Parameters: 7831795a4d1SJed Brown + r1 - memory allocated in first chunk 7841795a4d1SJed Brown . r2 - memory allocated in second chunk 7851795a4d1SJed Brown . r3 - memory allocated in third chunk 7861795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7871795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7881795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7891795a4d1SJed Brown 7901795a4d1SJed Brown Level: developer 7911795a4d1SJed Brown 792*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7931795a4d1SJed Brown 7941795a4d1SJed Brown M*/ 79566122d6dSBarry Smith #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6)) 7961795a4d1SJed Brown 7971795a4d1SJed Brown /*MC 798dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 799d382aafbSBarry Smith 800d382aafbSBarry Smith Synopsis: 801aaa7dc30SBarry Smith #include <petscsys.h> 802dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 803d382aafbSBarry Smith 804d382aafbSBarry Smith Not Collective 805d382aafbSBarry Smith 806e28ce29aSPatrick Sanan Input Parameters: 807d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 808d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 809d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 810d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 811d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 812d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 813dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 814d382aafbSBarry Smith 815e28ce29aSPatrick Sanan Output Parameters: 816d382aafbSBarry Smith + r1 - memory allocated in first chunk 817d382aafbSBarry Smith . r2 - memory allocated in second chunk 818d382aafbSBarry Smith . r3 - memory allocated in third chunk 819d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 820d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 821d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 822eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 823d382aafbSBarry Smith 824d382aafbSBarry Smith Level: developer 825d382aafbSBarry Smith 826*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 827d382aafbSBarry Smith 828d382aafbSBarry Smith M*/ 82966122d6dSBarry Smith #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7)) 830d382aafbSBarry Smith 831d382aafbSBarry Smith /*MC 8321795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8331795a4d1SJed Brown 8341795a4d1SJed Brown Synopsis: 835aaa7dc30SBarry Smith #include <petscsys.h> 8361795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8371795a4d1SJed Brown 8381795a4d1SJed Brown Not Collective 8391795a4d1SJed Brown 840e28ce29aSPatrick Sanan Input Parameters: 8411795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8421795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8431795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8441795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8451795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8461795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8471795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8481795a4d1SJed Brown 849e28ce29aSPatrick Sanan Output Parameters: 8501795a4d1SJed Brown + r1 - memory allocated in first chunk 8511795a4d1SJed Brown . r2 - memory allocated in second chunk 8521795a4d1SJed Brown . r3 - memory allocated in third chunk 8531795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8541795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8551795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8561795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8571795a4d1SJed Brown 8581795a4d1SJed Brown Level: developer 8591795a4d1SJed Brown 860*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8611795a4d1SJed Brown 8621795a4d1SJed Brown M*/ 86366122d6dSBarry Smith #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)((size_t)m1)*sizeof(**(r1)),(r1),(size_t)((size_t)m2)*sizeof(**(r2)),(r2),(size_t)((size_t)m3)*sizeof(**(r3)),(r3),(size_t)((size_t)m4)*sizeof(**(r4)),(r4),(size_t)((size_t)m5)*sizeof(**(r5)),(r5),(size_t)((size_t)m6)*sizeof(**(r6)),(r6),(size_t)((size_t)m7)*sizeof(**(r7)),(r7)) 8641795a4d1SJed Brown 8651795a4d1SJed Brown /*MC 866503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 867d382aafbSBarry Smith 868eca87e8dSBarry Smith Synopsis: 869aaa7dc30SBarry Smith #include <petscsys.h> 870b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 871eca87e8dSBarry Smith 872eca87e8dSBarry Smith Not Collective 873eca87e8dSBarry Smith 874d382aafbSBarry Smith Output Parameter: 875b00a9115SJed Brown . result - memory allocated, sized to match pointer type 876d382aafbSBarry Smith 877d382aafbSBarry Smith Level: beginner 878d382aafbSBarry Smith 879*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNewLog()`, `PetscCalloc1()`, `PetscMalloc1()` 880d382aafbSBarry Smith 881d382aafbSBarry Smith M*/ 882b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 883ad0619ddSBarry Smith 884ad0619ddSBarry Smith /*MC 885b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 886ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 887ad0619ddSBarry Smith 888ad0619ddSBarry Smith Synopsis: 889aaa7dc30SBarry Smith #include <petscsys.h> 890b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 891ad0619ddSBarry Smith 892ad0619ddSBarry Smith Not Collective 893ad0619ddSBarry Smith 894ad0619ddSBarry Smith Input Parameter: 895b00a9115SJed Brown . obj - object memory is logged to 896ad0619ddSBarry Smith 897ad0619ddSBarry Smith Output Parameter: 898b00a9115SJed Brown . result - memory allocated, sized to match pointer type 899ad0619ddSBarry Smith 900ad0619ddSBarry Smith Level: developer 901ad0619ddSBarry Smith 902*db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscMalloc()`, `PetscNew()`, `PetscLogObjectMemory()`, `PetscCalloc1()`, `PetscMalloc1()` 903ad0619ddSBarry Smith 904ad0619ddSBarry Smith M*/ 905d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 906d382aafbSBarry Smith 907d382aafbSBarry Smith /*MC 908d382aafbSBarry Smith PetscFree - Frees memory 909d382aafbSBarry Smith 910eca87e8dSBarry Smith Synopsis: 911aaa7dc30SBarry Smith #include <petscsys.h> 912eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 913eca87e8dSBarry Smith 914eca87e8dSBarry Smith Not Collective 915eca87e8dSBarry Smith 916d382aafbSBarry Smith Input Parameter: 9177f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 918d382aafbSBarry Smith 919d382aafbSBarry Smith Level: beginner 920d382aafbSBarry Smith 92149d7da52SJed Brown Notes: 922390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 923390e1bf2SBarry Smith 92449d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 925d382aafbSBarry Smith 926*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscNewLog()`, `PetscMalloc1()`, `PetscCalloc1()` 927d382aafbSBarry Smith 928d382aafbSBarry Smith M*/ 929ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 930d382aafbSBarry Smith 931d382aafbSBarry Smith /*MC 932d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 933d382aafbSBarry Smith 934eca87e8dSBarry Smith Synopsis: 935aaa7dc30SBarry Smith #include <petscsys.h> 936eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 937eca87e8dSBarry Smith 938eca87e8dSBarry Smith Not Collective 939eca87e8dSBarry Smith 940e28ce29aSPatrick Sanan Input Parameters: 941d382aafbSBarry Smith + memory1 - memory to free 942d382aafbSBarry Smith - memory2 - 2nd memory to free 943d382aafbSBarry Smith 944d382aafbSBarry Smith Level: developer 945d382aafbSBarry Smith 94695452b02SPatrick Sanan Notes: 94795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 948d382aafbSBarry Smith 949*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 950d382aafbSBarry Smith 951d382aafbSBarry Smith M*/ 952ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 953d382aafbSBarry Smith 954d382aafbSBarry Smith /*MC 955d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 956d382aafbSBarry Smith 957eca87e8dSBarry Smith Synopsis: 958aaa7dc30SBarry Smith #include <petscsys.h> 959eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 960eca87e8dSBarry Smith 961eca87e8dSBarry Smith Not Collective 962eca87e8dSBarry Smith 963e28ce29aSPatrick Sanan Input Parameters: 964d382aafbSBarry Smith + memory1 - memory to free 965d382aafbSBarry Smith . memory2 - 2nd memory to free 966d382aafbSBarry Smith - memory3 - 3rd memory to free 967d382aafbSBarry Smith 968d382aafbSBarry Smith Level: developer 969d382aafbSBarry Smith 97095452b02SPatrick Sanan Notes: 97195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 972d382aafbSBarry Smith 973*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 974d382aafbSBarry Smith 975d382aafbSBarry Smith M*/ 976ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 977d382aafbSBarry Smith 978d382aafbSBarry Smith /*MC 979d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 980d382aafbSBarry Smith 981eca87e8dSBarry Smith Synopsis: 982aaa7dc30SBarry Smith #include <petscsys.h> 983eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 984eca87e8dSBarry Smith 985eca87e8dSBarry Smith Not Collective 986eca87e8dSBarry Smith 987e28ce29aSPatrick Sanan Input Parameters: 988d382aafbSBarry Smith + m1 - memory to free 989d382aafbSBarry Smith . m2 - 2nd memory to free 990d382aafbSBarry Smith . m3 - 3rd memory to free 991d382aafbSBarry Smith - m4 - 4th memory to free 992d382aafbSBarry Smith 993d382aafbSBarry Smith Level: developer 994d382aafbSBarry Smith 99595452b02SPatrick Sanan Notes: 99695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 997d382aafbSBarry Smith 998*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 999d382aafbSBarry Smith 1000d382aafbSBarry Smith M*/ 1001ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1002d382aafbSBarry Smith 1003d382aafbSBarry Smith /*MC 1004d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1005d382aafbSBarry Smith 1006eca87e8dSBarry Smith Synopsis: 1007aaa7dc30SBarry Smith #include <petscsys.h> 1008eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1009eca87e8dSBarry Smith 1010eca87e8dSBarry Smith Not Collective 1011eca87e8dSBarry Smith 1012e28ce29aSPatrick Sanan Input Parameters: 1013d382aafbSBarry Smith + m1 - memory to free 1014d382aafbSBarry Smith . m2 - 2nd memory to free 1015d382aafbSBarry Smith . m3 - 3rd memory to free 1016d382aafbSBarry Smith . m4 - 4th memory to free 1017d382aafbSBarry Smith - m5 - 5th memory to free 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith Level: developer 1020d382aafbSBarry Smith 102195452b02SPatrick Sanan Notes: 102295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1023d382aafbSBarry Smith 1024*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 1025d382aafbSBarry Smith 1026d382aafbSBarry Smith M*/ 1027ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1028d382aafbSBarry Smith 1029d382aafbSBarry Smith /*MC 1030d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1031d382aafbSBarry Smith 1032eca87e8dSBarry Smith Synopsis: 1033aaa7dc30SBarry Smith #include <petscsys.h> 1034eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1035eca87e8dSBarry Smith 1036eca87e8dSBarry Smith Not Collective 1037eca87e8dSBarry Smith 1038e28ce29aSPatrick Sanan Input Parameters: 1039d382aafbSBarry Smith + m1 - memory to free 1040d382aafbSBarry Smith . m2 - 2nd memory to free 1041d382aafbSBarry Smith . m3 - 3rd memory to free 1042d382aafbSBarry Smith . m4 - 4th memory to free 1043d382aafbSBarry Smith . m5 - 5th memory to free 1044d382aafbSBarry Smith - m6 - 6th memory to free 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith Level: developer 1047d382aafbSBarry Smith 104895452b02SPatrick Sanan Notes: 104995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1050d382aafbSBarry Smith 1051*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith M*/ 1054ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith /*MC 1057d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1058d382aafbSBarry Smith 1059eca87e8dSBarry Smith Synopsis: 1060aaa7dc30SBarry Smith #include <petscsys.h> 1061eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1062eca87e8dSBarry Smith 1063eca87e8dSBarry Smith Not Collective 1064eca87e8dSBarry Smith 1065e28ce29aSPatrick Sanan Input Parameters: 1066d382aafbSBarry Smith + m1 - memory to free 1067d382aafbSBarry Smith . m2 - 2nd memory to free 1068d382aafbSBarry Smith . m3 - 3rd memory to free 1069d382aafbSBarry Smith . m4 - 4th memory to free 1070d382aafbSBarry Smith . m5 - 5th memory to free 1071d382aafbSBarry Smith . m6 - 6th memory to free 1072d382aafbSBarry Smith - m7 - 7th memory to free 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith Level: developer 1075d382aafbSBarry Smith 107695452b02SPatrick Sanan Notes: 107795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1078d382aafbSBarry Smith 1079*db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1080*db781477SPatrick Sanan `PetscMalloc7()` 1081d382aafbSBarry Smith 1082d382aafbSBarry Smith M*/ 1083ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1084d382aafbSBarry Smith 1085ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1086ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1087071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1088efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 10893221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1090ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 109192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith /* 1095c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1096c1706be6SHong Zhang */ 1097c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1098c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 109931f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 110031f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 110131f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 110231f06eaaSHong Zhang #endif 110359af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 110459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 110559af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 110659af0bd3SScott Kruger #endif 110759af0bd3SScott Kruger 1108a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 110936763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1110a5057860SBarry Smith 1111a5057860SBarry Smith /* 111266d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1113d382aafbSBarry Smith */ 1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 111592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1118e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1119e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 112092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 112192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1122efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 112392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 112492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1125608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1126608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1127d382aafbSBarry Smith 11286a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1129014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11328e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1133d382aafbSBarry Smith 1134d382aafbSBarry Smith /* 1135d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1136d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1137d382aafbSBarry Smith functionality and/or error checking. 1138d382aafbSBarry Smith */ 1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1141d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1149a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11532f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 11582c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 116147340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11626fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 11636991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 11646991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1166d382aafbSBarry Smith 1167573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1168573b0fb4SBarry Smith 1169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1172d382aafbSBarry Smith 1173e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1174a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1175a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1176a53986e1SJed Brown 1177d382aafbSBarry Smith /* 1178d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1179d382aafbSBarry Smith */ 1180367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1181570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1182de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1183014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1184014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1185d9822059SBarry Smith #else 1186de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1187d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1188d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1189d9822059SBarry Smith #endif 1190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1191d382aafbSBarry Smith 1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1193014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1194eb3f98d2SBarry Smith 119595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1196d6a4318aSJed Brown 1197639ff905SBarry Smith /* 1198639ff905SBarry Smith Defines PETSc error handling. 1199639ff905SBarry Smith */ 1200639ff905SBarry Smith #include <petscerror.h> 1201d382aafbSBarry Smith 12020700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1203014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1204014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1205014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 120681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 120781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 120881256985SMatthew G. Knepley 1209d382aafbSBarry Smith /* 1210d382aafbSBarry Smith Routines that get memory usage information from the OS 1211d382aafbSBarry Smith */ 1212014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1215b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1216d382aafbSBarry Smith 1217014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith /* 1220d382aafbSBarry Smith Initialization of PETSc 1221d382aafbSBarry Smith */ 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1226014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1229014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1232d382aafbSBarry Smith 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1234607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1235d382aafbSBarry Smith 1236014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1237014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1240d382aafbSBarry Smith 1241a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1242a50e088cSMatthew G. Knepley 1243d382aafbSBarry Smith /* 1244d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12452981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1246d382aafbSBarry Smith */ 1247638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1248638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1249638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith /* 1252d382aafbSBarry Smith Functions that can act on any PETSc object. 1253d382aafbSBarry Smith */ 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1271bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1272bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12750eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12760eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1278d382aafbSBarry Smith 1279665c2dedSJed Brown #include <petscviewertypes.h> 1280639ff905SBarry Smith #include <petscoptions.h> 1281639ff905SBarry Smith 1282608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1283608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1284608c71bfSMatthew G. Knepley 12850633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 12860633abcbSJed Brown 1287c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1288dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1289639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 12900005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 12910005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1299685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13024099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1304b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1307d382aafbSBarry Smith 1308e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13097aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1310e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1311e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1312e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1313e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1314e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1315e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1316e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1317e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1318e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 131915681b3cSBarry Smith 1320ec7429eaSBarry Smith #else 13217aab2a10SBarry Smith #define PetscSAWsBlock() 0 1322e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1323e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1324e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1325e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1326e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1327e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1328e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1329e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1330e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 133115681b3cSBarry Smith 1332ec7429eaSBarry Smith #endif 1333b90c6cbeSBarry Smith 133482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 133582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 133682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1337258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1338258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1339258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1340258ec3d2SMatthew G. Knepley #endif 13417d5d4d99SBarry Smith 13425fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1343a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13445fe58b6fSBarry Smith #endif 13457eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1346a64a8e02SBarry Smith 1347140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1348140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1349140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1350140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1351140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1352140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1353d382aafbSBarry Smith 1354d382aafbSBarry Smith /* 1355503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1356d382aafbSBarry Smith link libraries that will be loaded as needed. 1357d382aafbSBarry Smith */ 1358a240a19fSJed Brown 1359a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1360a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1361140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 13621c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 13631c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 136444ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1365140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1366140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1367140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1368d382aafbSBarry Smith 1369014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1377d382aafbSBarry Smith 1378d382aafbSBarry Smith /* 1379d382aafbSBarry Smith Useful utility routines 1380d382aafbSBarry Smith */ 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1383d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 138858b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,const PetscInt[2],PetscInt[2]); 138958b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,const PetscReal[2],PetscReal[2]); 1390d382aafbSBarry Smith 139164ac3b0dSPatrick Sanan /*MC 1392ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1393503cfb0cSBarry Smith 1394e28ce29aSPatrick Sanan Notes: 1395e28ce29aSPatrick Sanan This is useful in cases like 1396503cfb0cSBarry Smith $ int *a; 1397ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 13981cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 139964ac3b0dSPatrick Sanan 140064ac3b0dSPatrick Sanan Level: beginner 140164ac3b0dSPatrick Sanan 1402*db781477SPatrick Sanan .seealso `:` `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 140364ac3b0dSPatrick Sanan M*/ 1404d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1405503cfb0cSBarry Smith 1406d382aafbSBarry Smith /*MC 1407d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1408d382aafbSBarry Smith 1409d382aafbSBarry Smith Synopsis: 1410aaa7dc30SBarry Smith #include <petscsys.h> 1411659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1412d382aafbSBarry Smith 1413659f7ba0SBarry Smith Collective on comm 1414eca87e8dSBarry Smith 1415d382aafbSBarry Smith Input Parameters: 1416659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1417d382aafbSBarry Smith . format - the usual printf() format string 1418659f7ba0SBarry Smith - args - arguments to be printed 1419d382aafbSBarry Smith 1420d382aafbSBarry Smith Level: developer 1421d382aafbSBarry Smith 1422d382aafbSBarry Smith Fortran Note: 1423d382aafbSBarry Smith This routine is not supported in Fortran. 1424d382aafbSBarry Smith 1425659f7ba0SBarry Smith Note: 1426659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1427659f7ba0SBarry Smith 1428659f7ba0SBarry Smith To use, write your own function, for example, 1429659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1430659f7ba0SBarry Smith ${ 1431659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1432659f7ba0SBarry Smith $} 1433659f7ba0SBarry Smith then do the assigment 1434659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1435659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1436659f7ba0SBarry Smith 1437659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1438d382aafbSBarry Smith 1439*db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1440d382aafbSBarry Smith M*/ 14413ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 1442d382aafbSBarry Smith 1443fcfd50ebSBarry Smith /* 1444fcfd50ebSBarry Smith Defines PETSc profiling. 1445fcfd50ebSBarry Smith */ 14462c8e378dSBarry Smith #include <petsclog.h> 1447fcfd50ebSBarry Smith 1448fcfd50ebSBarry Smith /* 1449fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1450fcfd50ebSBarry Smith */ 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 14543ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14553ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 14563ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14573ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...) PETSC_ATTRIBUTE_FORMAT(3,5); 14581b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1459fcfd50ebSBarry Smith 14603ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2); 14613ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...) PETSC_ATTRIBUTE_FORMAT(1,2); 14623ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...) PETSC_ATTRIBUTE_FORMAT(2,3); 1463d382aafbSBarry Smith 1464d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1465d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1466d781fa04SBarry Smith 1467d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1469016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 147074ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1471d382aafbSBarry Smith #endif 1472d382aafbSBarry Smith 14733ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_ATTRIBUTE_FORMAT(2,3); 14743ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_ATTRIBUTE_FORMAT(3,4); 14750ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1480d382aafbSBarry Smith 1481014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1487b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1488d382aafbSBarry Smith 1489d382aafbSBarry Smith /* 1490d382aafbSBarry Smith For use in debuggers 1491d382aafbSBarry Smith */ 1492014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1493014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1497d382aafbSBarry Smith 1498a663daf8SBarry Smith #include <stddef.h> 1499a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1500d382aafbSBarry Smith #include <stdlib.h> 15016c7e564aSBarry Smith 15024a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1503d382aafbSBarry Smith #include <xmmintrin.h> 1504d382aafbSBarry Smith #endif 1505d382aafbSBarry Smith 1506d382aafbSBarry Smith /*@C 1507580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1508580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1509580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1510580bdb30SBarry Smith 1511580bdb30SBarry Smith Not Collective 1512580bdb30SBarry Smith 1513580bdb30SBarry Smith Input Parameters: 1514580bdb30SBarry Smith + b - pointer to initial memory space 1515580bdb30SBarry Smith . a - pointer to copy space 1516580bdb30SBarry Smith - n - length (in bytes) of space to copy 1517580bdb30SBarry Smith 1518580bdb30SBarry Smith Level: intermediate 1519580bdb30SBarry Smith 1520580bdb30SBarry Smith Note: 1521857a15f1SBarry Smith PetscArraymove() is preferred 1522580bdb30SBarry Smith This routine is analogous to memmove(). 1523580bdb30SBarry Smith 1524580bdb30SBarry Smith Developers Note: This is inlined for performance 1525580bdb30SBarry Smith 1526*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1527*db781477SPatrick Sanan `PetscArraymove()` 1528580bdb30SBarry Smith @*/ 15299fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1530580bdb30SBarry Smith { 1531580bdb30SBarry Smith PetscFunctionBegin; 15329a202e32SJacob Faibussowitsch if (n > 0) { 15332c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 15342c71b3e2SJacob Faibussowitsch PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 15359a202e32SJacob Faibussowitsch } 1536580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1537580bdb30SBarry Smith if (a < b) { 1538580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1539580bdb30SBarry Smith else { 1540580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1541580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1542580bdb30SBarry Smith } 1543580bdb30SBarry Smith } else { 1544580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1545580bdb30SBarry Smith else { 1546580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1547580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1548580bdb30SBarry Smith } 1549580bdb30SBarry Smith } 1550580bdb30SBarry Smith #else 1551580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1552580bdb30SBarry Smith #endif 1553580bdb30SBarry Smith PetscFunctionReturn(0); 1554580bdb30SBarry Smith } 1555580bdb30SBarry Smith 1556d382aafbSBarry Smith /*@C 1557d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1558d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1559d382aafbSBarry Smith PetscMemmove() in that case. 1560d382aafbSBarry Smith 1561d382aafbSBarry Smith Not Collective 1562d382aafbSBarry Smith 1563d382aafbSBarry Smith Input Parameters: 1564d382aafbSBarry Smith + b - pointer to initial memory space 1565d382aafbSBarry Smith - n - length (in bytes) of space to copy 1566d382aafbSBarry Smith 1567d382aafbSBarry Smith Output Parameter: 1568d382aafbSBarry Smith . a - pointer to copy space 1569d382aafbSBarry Smith 1570d382aafbSBarry Smith Level: intermediate 1571d382aafbSBarry Smith 1572d382aafbSBarry Smith Compile Option: 1573d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1574d382aafbSBarry Smith for memory copies on double precision values. 1575d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1576d382aafbSBarry Smith for memory copies on double precision values. 1577d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1578d382aafbSBarry Smith for memory copies on double precision values. 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Note: 1581580bdb30SBarry Smith Prefer PetscArraycpy() 1582d382aafbSBarry Smith This routine is analogous to memcpy(). 15831fd49c25SBarry Smith Not available from Fortran 15841fd49c25SBarry Smith 1585f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1586f5f57ec0SBarry Smith 1587*db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith @*/ 15909fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1591d382aafbSBarry Smith { 1592d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1593c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1594c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1595a7e36092SMatthew G Knepley PetscFunctionBegin; 15969a202e32SJacob Faibussowitsch if (n > 0) { 15972c71b3e2SJacob Faibussowitsch PetscCheck(b,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 15982c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 15999a202e32SJacob Faibussowitsch } 1600a7e36092SMatthew G Knepley #else 1601d382aafbSBarry Smith PetscFunctionBegin; 1602a7e36092SMatthew G Knepley #endif 1603a47a537aSLisandro Dalcin if (a != b && n > 0) { 1604d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16052c71b3e2SJacob Faibussowitsch PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl),PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1606d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 16076244d25cSSatish Balay Length (bytes) %zu first address %zu second address %zu",nl,al,bl); 1608d382aafbSBarry Smith #endif 1609d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1610c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1611d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1612d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1613c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 16149566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(len,&blen)); 16158b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1616d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1617d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1618d382aafbSBarry Smith #else 1619d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 16205f80ce2aSJacob Faibussowitsch for (size_t i=0; i<len; i++) y[i] = x[i]; 1621d382aafbSBarry Smith #endif 1622d382aafbSBarry Smith } else { 1623d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1624d382aafbSBarry Smith } 1625d382aafbSBarry Smith #else 1626d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1627d382aafbSBarry Smith #endif 1628d382aafbSBarry Smith } 1629d382aafbSBarry Smith PetscFunctionReturn(0); 1630d382aafbSBarry Smith } 1631d382aafbSBarry Smith 1632d382aafbSBarry Smith /*@C 1633d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1634d382aafbSBarry Smith 1635d382aafbSBarry Smith Not Collective 1636d382aafbSBarry Smith 1637d382aafbSBarry Smith Input Parameters: 1638d382aafbSBarry Smith + a - pointer to beginning memory location 1639d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1640d382aafbSBarry Smith 1641d382aafbSBarry Smith Level: intermediate 1642d382aafbSBarry Smith 1643d382aafbSBarry Smith Compile Option: 1644d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1645d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1646d382aafbSBarry Smith 16471fd49c25SBarry Smith Not available from Fortran 1648857a15f1SBarry Smith Prefer PetscArrayzero() 16491fd49c25SBarry Smith 1650503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1651503cfb0cSBarry Smith 1652*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1653d382aafbSBarry Smith @*/ 16549fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a,size_t n) 1655d382aafbSBarry Smith { 1656d382aafbSBarry Smith if (n > 0) { 1657d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16582c71b3e2SJacob Faibussowitsch PetscCheck(a,PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1659d382aafbSBarry Smith #endif 1660d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1661d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1662d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1663d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1664d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1665d382aafbSBarry Smith } else { 1666d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1667d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1668d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1669d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1670d382aafbSBarry Smith } else { 1671d382aafbSBarry Smith #endif 1672d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1673d382aafbSBarry Smith bzero((char *)a,n); 1674d382aafbSBarry Smith #else 1675d382aafbSBarry Smith memset((char*)a,0,n); 1676d382aafbSBarry Smith #endif 1677d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1678d382aafbSBarry Smith } 1679d382aafbSBarry Smith #endif 1680d382aafbSBarry Smith } 1681d382aafbSBarry Smith return 0; 1682d382aafbSBarry Smith } 1683d382aafbSBarry Smith 1684d382aafbSBarry Smith /*MC 1685580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1686580bdb30SBarry Smith 1687580bdb30SBarry Smith Synopsis: 1688580bdb30SBarry Smith #include <petscsys.h> 1689580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1690580bdb30SBarry Smith 1691580bdb30SBarry Smith Not Collective 1692580bdb30SBarry Smith 1693580bdb30SBarry Smith Input Parameters: 1694580bdb30SBarry Smith + str1 - First array 1695580bdb30SBarry Smith . str2 - Second array 1696580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1697580bdb30SBarry Smith 1698580bdb30SBarry Smith Output Parameters: 1699580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1700580bdb30SBarry Smith 1701580bdb30SBarry Smith Level: intermediate 1702580bdb30SBarry Smith 1703580bdb30SBarry Smith Note: 1704857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1705580bdb30SBarry Smith The arrays must be of the same type 1706580bdb30SBarry Smith 1707*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1708*db781477SPatrick Sanan `PetscArraymove()` 1709580bdb30SBarry Smith M*/ 17109e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1711580bdb30SBarry Smith 17128f8f2f0dSBarry Smith /*MC 1713580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1714580bdb30SBarry Smith do not overlap 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith Synopsis: 1717580bdb30SBarry Smith #include <petscsys.h> 1718580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1719580bdb30SBarry Smith 1720580bdb30SBarry Smith Not Collective 1721580bdb30SBarry Smith 1722580bdb30SBarry Smith Input Parameters: 1723580bdb30SBarry Smith + str1 - First array 1724580bdb30SBarry Smith . str2 - Second array 1725580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1726580bdb30SBarry Smith 1727580bdb30SBarry Smith Level: intermediate 1728580bdb30SBarry Smith 1729580bdb30SBarry Smith Note: 1730857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1731580bdb30SBarry Smith The arrays must be of the same type 1732580bdb30SBarry Smith 1733*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1734580bdb30SBarry Smith M*/ 17359e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1736580bdb30SBarry Smith 17378f8f2f0dSBarry Smith /*MC 1738580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1739580bdb30SBarry Smith 1740580bdb30SBarry Smith Synopsis: 1741580bdb30SBarry Smith #include <petscsys.h> 1742580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1743580bdb30SBarry Smith 1744580bdb30SBarry Smith Not Collective 1745580bdb30SBarry Smith 1746580bdb30SBarry Smith Input Parameters: 1747de25709eSStefano Zampini + str1 - First array (destination) 1748de25709eSStefano Zampini . str2 - Second array (source) 1749580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1750580bdb30SBarry Smith 1751580bdb30SBarry Smith Level: intermediate 1752580bdb30SBarry Smith 1753580bdb30SBarry Smith Note: 1754857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1755580bdb30SBarry Smith The arrays must be of the same type 1756580bdb30SBarry Smith 1757*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1758580bdb30SBarry Smith M*/ 17599e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1760580bdb30SBarry Smith 17618f8f2f0dSBarry Smith /*MC 1762580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1763580bdb30SBarry Smith 1764580bdb30SBarry Smith Synopsis: 1765580bdb30SBarry Smith #include <petscsys.h> 1766580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1767580bdb30SBarry Smith 1768580bdb30SBarry Smith Not Collective 1769580bdb30SBarry Smith 1770580bdb30SBarry Smith Input Parameters: 1771580bdb30SBarry Smith + str1 - array 1772580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1773580bdb30SBarry Smith 1774580bdb30SBarry Smith Level: intermediate 1775580bdb30SBarry Smith 1776580bdb30SBarry Smith Note: 1777857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1778580bdb30SBarry Smith 1779*db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1780580bdb30SBarry Smith M*/ 17819e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1782580bdb30SBarry Smith 1783d382aafbSBarry Smith /*MC 1784d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1785d382aafbSBarry Smith 1786eca87e8dSBarry Smith Synopsis: 1787aaa7dc30SBarry Smith #include <petscsys.h> 1788eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1789eca87e8dSBarry Smith 1790d382aafbSBarry Smith Not Collective 1791d382aafbSBarry Smith 1792d382aafbSBarry Smith Input Parameters: 1793d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1794d382aafbSBarry Smith . n - number of elements to fetch 1795d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 179650d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Level: developer 1799d382aafbSBarry Smith 1800d382aafbSBarry Smith Notes: 1801d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1802d382aafbSBarry Smith 180350d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 180450d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 180550d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 180663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 180763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 180863cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1809d382aafbSBarry Smith 1810d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1811d382aafbSBarry Smith address). 1812d382aafbSBarry Smith 1813d382aafbSBarry Smith M*/ 1814d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1815d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1816d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1817d382aafbSBarry Smith } while (0) 1818d382aafbSBarry Smith 1819d382aafbSBarry Smith /* 1820d382aafbSBarry Smith Determine if some of the kernel computation routines use 1821d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1822d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1823d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1824e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1825d382aafbSBarry Smith */ 1826d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1827d382aafbSBarry Smith 1828d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1829d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1830d382aafbSBarry Smith #endif 1831d382aafbSBarry Smith 18325a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18335a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1834d382aafbSBarry Smith #endif 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1837d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1838d382aafbSBarry Smith #endif 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1841d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1842d382aafbSBarry Smith #endif 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1845d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1846d382aafbSBarry Smith #endif 1847d382aafbSBarry Smith 1848d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1849d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1850d382aafbSBarry Smith #endif 1851d382aafbSBarry Smith 1852d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1853d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1854d382aafbSBarry Smith #endif 1855d382aafbSBarry Smith 1856d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1857d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1858d382aafbSBarry Smith #endif 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1861d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1862d382aafbSBarry Smith #endif 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1865d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1866d382aafbSBarry Smith #endif 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1869d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1870d382aafbSBarry Smith #endif 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1873d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1874d382aafbSBarry Smith #endif 1875d382aafbSBarry Smith 1876d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1877d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1878d382aafbSBarry Smith #endif 1879d382aafbSBarry Smith 1880d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1881d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1882d382aafbSBarry Smith #endif 1883d382aafbSBarry Smith 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith /* 1887d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1888d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1889d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1890d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1891d382aafbSBarry Smith ugly extern "C" {} wrappers. 1892d382aafbSBarry Smith */ 1893d382aafbSBarry Smith #if defined(__cplusplus) 1894d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1895d382aafbSBarry Smith # define EXTERN_C_END } 1896d382aafbSBarry Smith #else 1897d382aafbSBarry Smith # define EXTERN_C_BEGIN 1898d382aafbSBarry Smith # define EXTERN_C_END 1899d382aafbSBarry Smith #endif 1900d382aafbSBarry Smith 1901d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1902d382aafbSBarry Smith 1903d382aafbSBarry Smith /*MC 1904d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1905d382aafbSBarry Smith communication 1906d382aafbSBarry Smith 1907d382aafbSBarry Smith Level: beginner 1908d382aafbSBarry Smith 1909d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1910d382aafbSBarry Smith 1911*db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1912d382aafbSBarry Smith M*/ 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1915014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1916014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1917c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1918c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1919c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1920c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1921d382aafbSBarry Smith #endif 1922d382aafbSBarry Smith 1923d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1924d382aafbSBarry Smith 1925d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1926d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1927d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1928d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1929d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1930d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1931eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 1932d382aafbSBarry Smith 193361b0d812SBarry Smith /*@C 1934c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 1935c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 1936c73702f5SBarry Smith 1937c73702f5SBarry Smith Not Collective 1938c73702f5SBarry Smith 1939c73702f5SBarry Smith Input Parameter: 1940c73702f5SBarry Smith . a - the PetscInt64 value 1941c73702f5SBarry Smith 1942c73702f5SBarry Smith Output Parameter: 1943c73702f5SBarry Smith . b - the resulting PetscInt value 1944c73702f5SBarry Smith 1945c73702f5SBarry Smith Level: advanced 1946c73702f5SBarry Smith 1947c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1948c73702f5SBarry Smith 1949c73702f5SBarry Smith Not available from Fortran 1950c73702f5SBarry Smith 1951*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1952c73702f5SBarry Smith @*/ 19539fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 1954c73702f5SBarry Smith { 1955c73702f5SBarry Smith PetscFunctionBegin; 1956c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19573ca90d2dSJacob Faibussowitsch if (a > PETSC_MAX_INT) { 19583ca90d2dSJacob Faibussowitsch *b = 0; 195998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); 19603ca90d2dSJacob Faibussowitsch } 1961c73702f5SBarry Smith #endif 1962c73702f5SBarry Smith *b = (PetscInt)(a); 1963c73702f5SBarry Smith PetscFunctionReturn(0); 1964c73702f5SBarry Smith } 1965c73702f5SBarry Smith 1966c73702f5SBarry Smith /*@C 1967981bb840SJunchao Zhang PetscCountCast - casts a PetscCount to a PetscInt (which may be 32 bits in size), generates an 1968981bb840SJunchao Zhang error if the PetscInt is not large enough to hold the number. 1969981bb840SJunchao Zhang 1970981bb840SJunchao Zhang Not Collective 1971981bb840SJunchao Zhang 1972981bb840SJunchao Zhang Input Parameter: 1973981bb840SJunchao Zhang . a - the PetscCount value 1974981bb840SJunchao Zhang 1975981bb840SJunchao Zhang Output Parameter: 1976981bb840SJunchao Zhang . b - the resulting PetscInt value 1977981bb840SJunchao Zhang 1978981bb840SJunchao Zhang Level: advanced 1979981bb840SJunchao Zhang 1980981bb840SJunchao Zhang Notes: 1981981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1982981bb840SJunchao Zhang 1983981bb840SJunchao Zhang Not available from Fortran 1984981bb840SJunchao Zhang 1985*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 1986981bb840SJunchao Zhang @*/ 1987981bb840SJunchao Zhang static inline PetscErrorCode PetscCountCast(PetscCount a,PetscInt *b) 1988981bb840SJunchao Zhang { 1989981bb840SJunchao Zhang PetscFunctionBegin; 1990981bb840SJunchao Zhang if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) { 1991981bb840SJunchao Zhang *b = 0; 1992981bb840SJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); 1993981bb840SJunchao Zhang } 1994981bb840SJunchao Zhang *b = (PetscInt)(a); 1995981bb840SJunchao Zhang PetscFunctionReturn(0); 1996981bb840SJunchao Zhang } 1997981bb840SJunchao Zhang 1998981bb840SJunchao Zhang /*@C 199961b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 200061b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 200161b0d812SBarry Smith 200261b0d812SBarry Smith Not Collective 200361b0d812SBarry Smith 200461b0d812SBarry Smith Input Parameter: 200561b0d812SBarry Smith . a - the PetscInt value 200661b0d812SBarry Smith 200761b0d812SBarry Smith Output Parameter: 200861b0d812SBarry Smith . b - the resulting PetscBLASInt value 200961b0d812SBarry Smith 201061b0d812SBarry Smith Level: advanced 201161b0d812SBarry Smith 20120bc7d38cSBarry Smith Notes: 20131fd49c25SBarry Smith Not available from Fortran 2014f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20151fd49c25SBarry Smith 2016*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 201761b0d812SBarry Smith @*/ 20189fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2019c5df96a5SBarry Smith { 2020c5df96a5SBarry Smith PetscFunctionBegin; 202154c59aa7SJacob Faibussowitsch *b = 0; 202254c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 202354c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running",a); 202454c59aa7SJacob Faibussowitsch } 202554c59aa7SJacob Faibussowitsch PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2026c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2027c5df96a5SBarry Smith PetscFunctionReturn(0); 2028c5df96a5SBarry Smith } 2029c5df96a5SBarry Smith 203061b0d812SBarry Smith /*@C 2031eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2032eee0c0a6SToby Isaac 2033eee0c0a6SToby Isaac Not Collective 2034eee0c0a6SToby Isaac 2035eee0c0a6SToby Isaac Input Parameter: 2036eee0c0a6SToby Isaac . a - the PetscInt value 2037eee0c0a6SToby Isaac 2038eee0c0a6SToby Isaac Output Parameter: 2039eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2040eee0c0a6SToby Isaac 2041eee0c0a6SToby Isaac Level: advanced 2042eee0c0a6SToby Isaac 2043eee0c0a6SToby Isaac Notes: 2044eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2045eee0c0a6SToby Isaac 2046*db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2047eee0c0a6SToby Isaac @*/ 20489fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2049eee0c0a6SToby Isaac { 2050eee0c0a6SToby Isaac PetscFunctionBegin; 205154c59aa7SJacob Faibussowitsch *b = 0; 205254c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.",a); 205354c59aa7SJacob Faibussowitsch PetscCheck(a >= 0,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); 2054eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2055eee0c0a6SToby Isaac PetscFunctionReturn(0); 2056eee0c0a6SToby Isaac } 2057eee0c0a6SToby Isaac 2058eee0c0a6SToby Isaac /*@C 205961b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 206061b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 206161b0d812SBarry Smith 206261b0d812SBarry Smith Not Collective 206361b0d812SBarry Smith 206461b0d812SBarry Smith Input Parameter: 206561b0d812SBarry Smith . a - the PetscInt value 206661b0d812SBarry Smith 206761b0d812SBarry Smith Output Parameter: 206861b0d812SBarry Smith . b - the resulting PetscMPIInt value 206961b0d812SBarry Smith 207061b0d812SBarry Smith Level: advanced 207161b0d812SBarry Smith 20721fd49c25SBarry Smith Not available from Fortran 20731fd49c25SBarry Smith 2074*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 207561b0d812SBarry Smith @*/ 20769fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 20774dc2109aSBarry Smith { 20784dc2109aSBarry Smith PetscFunctionBegin; 207954c59aa7SJacob Faibussowitsch *b = 0; 208054c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers",a); 2081c73702f5SBarry Smith *b = (PetscMPIInt)(a); 20824dc2109aSBarry Smith PetscFunctionReturn(0); 20834dc2109aSBarry Smith } 20844dc2109aSBarry Smith 2085bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 20862f18eb33SBarry Smith 20872f18eb33SBarry Smith /*@C 20882f18eb33SBarry Smith 20892f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 20902f18eb33SBarry Smith 20912f18eb33SBarry Smith Not Collective 20922f18eb33SBarry Smith 2093d8d19677SJose E. Roman Input Parameters: 20942f18eb33SBarry Smith + a - the PetscReal value 20952f18eb33SBarry Smith - b - the second value 20962f18eb33SBarry Smith 2097390e1bf2SBarry Smith Returns: 2098390e1bf2SBarry Smith the result as a PetscInt value 20992f18eb33SBarry Smith 2100bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21012f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21022f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21032f18eb33SBarry Smith 2104e28ce29aSPatrick Sanan Developers Note: 2105e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21062f18eb33SBarry Smith 21072f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21082f18eb33SBarry Smith 21091fd49c25SBarry Smith Not available from Fortran 21101fd49c25SBarry Smith 21112f18eb33SBarry Smith Level: advanced 21122f18eb33SBarry Smith 2113*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21142f18eb33SBarry Smith @*/ 21159fbee547SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21162f18eb33SBarry Smith { 21175f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a*(PetscReal)b); 21182f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21192f18eb33SBarry Smith return (PetscInt)r; 21202f18eb33SBarry Smith } 21212f18eb33SBarry Smith 21222f18eb33SBarry Smith /*@C 21232f18eb33SBarry Smith 21242f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 21252f18eb33SBarry Smith 21262f18eb33SBarry Smith Not Collective 21272f18eb33SBarry Smith 2128d8d19677SJose E. Roman Input Parameters: 21292f18eb33SBarry Smith + a - the PetscInt value 21302f18eb33SBarry Smith - b - the second value 21312f18eb33SBarry Smith 2132390e1bf2SBarry Smith Returns: 2133390e1bf2SBarry Smith the result as a PetscInt value 21342f18eb33SBarry Smith 2135bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21362f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21372f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21382f18eb33SBarry Smith 21391fd49c25SBarry Smith Not available from Fortran 21401fd49c25SBarry Smith 21412f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21422f18eb33SBarry Smith 21432f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21442f18eb33SBarry Smith 21452f18eb33SBarry Smith Level: advanced 21462f18eb33SBarry Smith 2147*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21482f18eb33SBarry Smith @*/ 21499fbee547SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 21502f18eb33SBarry Smith { 21515f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a,b); 21522f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21532f18eb33SBarry Smith return (PetscInt)r; 21542f18eb33SBarry Smith } 21552f18eb33SBarry Smith 2156f91af8c7SBarry Smith /*@C 2157f91af8c7SBarry Smith 2158f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2159f91af8c7SBarry Smith 2160f91af8c7SBarry Smith Not Collective 2161f91af8c7SBarry Smith 2162d8d19677SJose E. Roman Input Parameters: 2163f91af8c7SBarry Smith + a - the PetscInt value 2164f91af8c7SBarry Smith - b - the second value 2165f91af8c7SBarry Smith 2166390e1bf2SBarry Smith Returns: 2167390e1bf2SBarry Smith the result as a PetscInt value 2168f91af8c7SBarry Smith 2169bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2170f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2171f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2172f91af8c7SBarry Smith 2173f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2174f91af8c7SBarry Smith 2175f5f57ec0SBarry Smith Not available from Fortran 2176f5f57ec0SBarry Smith 2177f91af8c7SBarry Smith Level: advanced 2178f91af8c7SBarry Smith 2179*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2180f91af8c7SBarry Smith @*/ 21819fbee547SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2182f91af8c7SBarry Smith { 21835f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2184f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2185f91af8c7SBarry Smith return (PetscInt)r; 2186f91af8c7SBarry Smith } 2187f91af8c7SBarry Smith 21882f18eb33SBarry Smith /*@C 21892f18eb33SBarry Smith 21902f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 21912f18eb33SBarry Smith 21922f18eb33SBarry Smith Not Collective 21932f18eb33SBarry Smith 2194d8d19677SJose E. Roman Input Parameters: 21952f18eb33SBarry Smith + a - the PetscInt value 21962f18eb33SBarry Smith - b - the second value 21972f18eb33SBarry Smith 2198d8d19677SJose E. Roman Output Parameter: 2199390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22002f18eb33SBarry Smith 2201bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22022f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22032f18eb33SBarry Smith 2204f5f57ec0SBarry Smith Not available from Fortran 2205f5f57ec0SBarry Smith 2206220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22072f18eb33SBarry Smith 22082f18eb33SBarry Smith Level: advanced 22092f18eb33SBarry Smith 2210*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22112f18eb33SBarry Smith @*/ 22129fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22132f18eb33SBarry Smith { 2214bafee8b4SSatish Balay PetscInt64 r; 22152f18eb33SBarry Smith 22162f18eb33SBarry Smith PetscFunctionBegin; 2217bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22182f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22192c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 22202f18eb33SBarry Smith #endif 2221f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2222f91af8c7SBarry Smith PetscFunctionReturn(0); 2223f91af8c7SBarry Smith } 2224f91af8c7SBarry Smith 2225f91af8c7SBarry Smith /*@C 2226f91af8c7SBarry Smith 2227fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2228f91af8c7SBarry Smith 2229f91af8c7SBarry Smith Not Collective 2230f91af8c7SBarry Smith 2231d8d19677SJose E. Roman Input Parameters: 2232f91af8c7SBarry Smith + a - the PetscInt value 2233f91af8c7SBarry Smith - b - the second value 2234f91af8c7SBarry Smith 2235d8d19677SJose E. Roman Output Parameter: 2236390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2237f91af8c7SBarry Smith 2238bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2239f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2240f91af8c7SBarry Smith 2241f5f57ec0SBarry Smith Not available from Fortran 2242f5f57ec0SBarry Smith 2243f91af8c7SBarry Smith Level: advanced 2244f91af8c7SBarry Smith 2245*db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2246f91af8c7SBarry Smith @*/ 22479fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2248f91af8c7SBarry Smith { 2249bafee8b4SSatish Balay PetscInt64 r; 2250f91af8c7SBarry Smith 2251f91af8c7SBarry Smith PetscFunctionBegin; 2252bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2253f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22542c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT,PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2255f91af8c7SBarry Smith #endif 2256f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 22572f18eb33SBarry Smith PetscFunctionReturn(0); 22582f18eb33SBarry Smith } 2259c5df96a5SBarry Smith 2260d382aafbSBarry Smith /* 22612981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2262d382aafbSBarry Smith */ 2263d382aafbSBarry Smith #if defined(hz) 2264d382aafbSBarry Smith # undef hz 2265d382aafbSBarry Smith #endif 2266d382aafbSBarry Smith 226715a5570dSLisandro Dalcin #include <limits.h> 226815a5570dSLisandro Dalcin 226915a5570dSLisandro Dalcin /* The number of bits in a byte */ 227015a5570dSLisandro Dalcin 227115a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 227215a5570dSLisandro Dalcin 2273d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2274d382aafbSBarry Smith # include <sys/types.h> 2275d382aafbSBarry Smith #endif 2276d382aafbSBarry Smith 2277d382aafbSBarry Smith /*MC 2278d382aafbSBarry Smith 227966d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 228066d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 228166d79e26SBarry Smith 228266d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 228366d79e26SBarry Smith 228466d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 228566d79e26SBarry Smith 228666d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 228766d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 228866d79e26SBarry Smith 228966d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 229066d79e26SBarry Smith 229166d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 229266d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 229366d79e26SBarry Smith version number (x.y.z). 229466d79e26SBarry Smith 229566d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 229666d79e26SBarry Smith 229766d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 229866d79e26SBarry Smith 229966d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 230066d79e26SBarry Smith 230166d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 230266d79e26SBarry Smith 2303cbc12506SBarry Smith PETSC_VERSION_() is deprecated and will eventually be removed. 230466d79e26SBarry Smith 2305cbc12506SBarry Smith Level: intermediate 230666d79e26SBarry Smith 230766d79e26SBarry Smith M*/ 230866d79e26SBarry Smith 2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 231527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23165f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2317d382aafbSBarry Smith 23186a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 23196a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 23206a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2322ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 232322ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2324b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 2325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2326f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 232760e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2328d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2332981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount,PetscInt[],PetscCount[]); 23336c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 2334981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount,PetscInt[],PetscInt[],PetscCount[]); 233517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 233617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 23385569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 234017df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 234239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2344745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 234539f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 23496c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 23506c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2351e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2352ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2353ce605777SToby Isaac 23544d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2355676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2356676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2357676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 23584d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2359676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2360676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2361676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2362676f2a66SJacob Faibussowitsch 2363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2365d382aafbSBarry Smith 236676bdecfbSBarry Smith /*J 2367d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2368d382aafbSBarry Smith 2369d382aafbSBarry Smith Level: beginner 2370d382aafbSBarry Smith 2371e28ce29aSPatrick Sanan Notes: 2372e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 237325ccb61fSToby Isaac with the option --download-sprng or --download-random123 2374d382aafbSBarry Smith 2375*db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 237676bdecfbSBarry Smith J*/ 237719fd82e9SBarry Smith typedef const char* PetscRandomType; 2378d382aafbSBarry Smith #define PETSCRAND "rand" 2379d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2380d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2381c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 238225ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2383808ba619SStefano Zampini #define PETSCCURAND "curand" 2384d382aafbSBarry Smith 2385d382aafbSBarry Smith /* Logging support */ 2386014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2387d382aafbSBarry Smith 2388607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2389d382aafbSBarry Smith 2390d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2391140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2392d382aafbSBarry Smith 2393bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 239419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 239619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2397fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2399d382aafbSBarry Smith 2400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2403808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2404808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2411d382aafbSBarry Smith 2412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 241997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24208a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 242197540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2422d382aafbSBarry Smith 24239fbee547SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 242430815ce0SLisandro Dalcin 24259860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 24269860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2427f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2428f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2436c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2437e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2438c891a504SStefano Zampini #endif 2439d382aafbSBarry Smith 2440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2443d382aafbSBarry Smith 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24502a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2451d382aafbSBarry Smith 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2457cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2458cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2459d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2460d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2461d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2462d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 24636afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 24646afbe7ddSJed Brown MPI_Request**,MPI_Request**, 24656afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 24666afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 24676afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2468d382aafbSBarry Smith 24696145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24706145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24716145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 24726145cd65SJed Brown 2473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2474d382aafbSBarry Smith 2475ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2476ce94432eSBarry Smith 247745487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 247845487dadSJed Brown 2479d382aafbSBarry Smith struct _n_PetscSubcomm { 2480d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2481d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2482306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 248345487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 248445487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2485708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 248645487dadSJed Brown PetscSubcommType type; 2487e5acf8a4SHong Zhang char *subcommprefix; 2488d382aafbSBarry Smith }; 2489d382aafbSBarry Smith 24909fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 24919fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 24929fbee547SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 249765d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2498053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2499f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2500e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2501a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2502a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2503a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2504d382aafbSBarry Smith 25059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25079962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25089962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25099962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25109962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25119962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25129962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25139962606eSBarry Smith 25145e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25155f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25165f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25175f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25185f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25195e71baefSBarry Smith 2520a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2521a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2522a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2523a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2524a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2525a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2526a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2527a32e93adSJunchao Zhang 252813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 25290f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 253013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2531137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2532137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2533137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 253413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 253513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 25360f453b92SJed Brown 2537471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2538471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2539471ecdacSJed Brown * possible. */ 25409fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2541d382aafbSBarry Smith 25429de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25439de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 25449de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 25459de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 25469de0f6ecSBarry Smith 2547ace2fbaeSBarry Smith #include <stdarg.h> 2548ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2549ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2550ace2fbaeSBarry Smith 2551268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2552fbfcfee5SBarry Smith 25531f817a21SBarry Smith /*@C 25541f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25551f817a21SBarry Smith 25561f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 25571f817a21SBarry Smith 25581f817a21SBarry Smith Input Parameters: 25591f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 25601f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 25611f817a21SBarry Smith 2562850545d0SSatish Balay Level: intermediate 2563850545d0SSatish Balay 2564f5f57ec0SBarry Smith Not available from Fortran 2565f5f57ec0SBarry Smith 25661f817a21SBarry Smith Options Database: 2567063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 25681f817a21SBarry Smith @*/ 25699fbee547SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2570dff31646SBarry Smith { 2571dff31646SBarry Smith size_t len; 2572dff31646SBarry Smith char *vstring; 2573dff31646SBarry Smith 25741f817a21SBarry Smith PetscFunctionBegin; 25758d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 25769566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit,&len)); 25779566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList,len,&vstring)); 25789566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring,cit,len)); 2579dff31646SBarry Smith if (set) *set = PETSC_TRUE; 25801f817a21SBarry Smith PetscFunctionReturn(0); 2581dff31646SBarry Smith } 2582dff31646SBarry Smith 2583b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2584fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2585fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2586f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2587fe278a28SBarry Smith 2588f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2589f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2590b967cddfSBarry Smith 25919f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 25929f4d3c52SBarry Smith 259304102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2594763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2595dff31646SBarry Smith 259668e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 25975dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2598d382aafbSBarry Smith 2599b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 26009fbee547SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2601df05ca09SBarry Smith { 2602df05ca09SBarry Smith unsigned int c,hash = 5381; 2603df05ca09SBarry Smith 2604503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2605df05ca09SBarry Smith return hash; 2606df05ca09SBarry Smith } 260777a5e07dSBarry Smith 260877a5e07dSBarry Smith /*MC 260977a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 261077a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 261177a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 261277a5e07dSBarry Smith 2613d083f849SBarry Smith Collective 261477a5e07dSBarry Smith 261577a5e07dSBarry Smith Synopsis: 261677a5e07dSBarry Smith #include <petscsys.h> 261777a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 261877a5e07dSBarry Smith 261977a5e07dSBarry Smith Input Parameters: 2620df05ca09SBarry Smith + a - pointer to the input data to be reduced 2621df05ca09SBarry Smith . c - the number of MPI data items in a and b 2622df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2623df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2624df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 262577a5e07dSBarry Smith 262677a5e07dSBarry Smith Output Parameter: 2627df05ca09SBarry Smith . b - the reduced values 262877a5e07dSBarry Smith 2629e28ce29aSPatrick Sanan Notes: 2630e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 263177a5e07dSBarry Smith 2632df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2633df05ca09SBarry Smith 26341c2dc1cbSBarry Smith The error code this returns should be checked with PetscCall() even though it looks like an MPI function because it always returns PETSc error codes 2635df05ca09SBarry Smith 263677a5e07dSBarry Smith Level: developer 263777a5e07dSBarry Smith 2638*db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 263977a5e07dSBarry Smith M*/ 26401c2dc1cbSBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) PetscMacroReturnStandard( \ 2641df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6]; \ 26423ca90d2dSJacob Faibussowitsch int _mpiu_allreduce_c_int = (int)c; \ 2643df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; \ 2644df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; \ 2645df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; \ 26469566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm)); \ 26472c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[0] == a_b2[1],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors"); \ 26482c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[2] == a_b2[3],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors"); \ 26492c71b3e2SJacob Faibussowitsch PetscCheck(-a_b2[4] == a_b2[5],PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",_mpiu_allreduce_c_int); \ 26509566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allreduce((a),(b),(c),d,e,(fcomm))); \ 26515f80ce2aSJacob Faibussowitsch ) 2652b2566f29SBarry Smith #else 26531c2dc1cbSBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a),(b),(c),d,e,(fcomm)))) 2654b2566f29SBarry Smith #endif 2655b2566f29SBarry Smith 2656b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26578198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 26588198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 26592f065d89SBarry Smith #endif 26608198064fSBarry Smith 2661cd88fca5SStefano Zampini /* this is a vile hack */ 2662cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2663961fb248SStefano Zampini #if !defined(PETSC_NECMPI_VERSION_MAJOR) || \ 2664961fb248SStefano Zampini !defined(PETSC_NECMPI_VERSION_MINOR) || \ 2665961fb248SStefano Zampini PETSC_NECMPI_VERSION_MAJOR < 2 || \ 2666961fb248SStefano Zampini (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2667cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2668cd88fca5SStefano Zampini #endif 2669961fb248SStefano Zampini #endif 2670cd88fca5SStefano Zampini 267112801b39SBarry Smith /* 267260fbe2beSVaclav Hapla List of external packages and queries on it 267360fbe2beSVaclav Hapla */ 267460fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 267560fbe2beSVaclav Hapla 2676a52b435bSMark Adams /* 2677a52b435bSMark Adams OpenMP support 2678a52b435bSMark Adams */ 2679a52b435bSMark Adams #if defined(_OPENMP) 2680a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2681a52b435bSMark Adams #else // no OpenMP so no threads 2682a52b435bSMark Adams #define PetscPragmaOMP(...) 2683a52b435bSMark Adams #endif 2684a52b435bSMark Adams 2685d382aafbSBarry Smith #endif 2686