1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 447d993e7Ssuyashtn Portions of this code are under: 547d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 6d382aafbSBarry Smith */ 76524c165SJacob Faibussowitsch #ifndef PETSCSYS_H 826bd1501SBarry Smith #define PETSCSYS_H 93ca90d2dSJacob Faibussowitsch 10d382aafbSBarry Smith /* ========================================================================== */ 11d382aafbSBarry Smith /* 12d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 131c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 141c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 151c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 161cc8b206SBarry Smith directory as the other PETSc include files. 17d382aafbSBarry Smith */ 182c8e378dSBarry Smith #include <petscconf.h> 191c77a0c5SBarry Smith #include <petscconf_poison.h> 202c8e378dSBarry Smith #include <petscfix.h> 21bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2233bb201bSJacob Faibussowitsch 23ac09b921SBarry Smith /* SUBMANSEC = Sys */ 24ac09b921SBarry Smith 2573fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2673fca5a0SBarry Smith /* 2773fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2873fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2973fca5a0SBarry Smith */ 30216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 3173fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3273fca5a0SBarry Smith #endif 33216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3473fca5a0SBarry Smith #define _BSD_SOURCE 3573fca5a0SBarry Smith #endif 3607f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3707f00807SSatish Balay #define _DEFAULT_SOURCE 3807f00807SSatish Balay #endif 39ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 40ea0fecefSShri Abhyankar #define _GNU_SOURCE 41ea0fecefSShri Abhyankar #endif 4273fca5a0SBarry Smith #endif 4373fca5a0SBarry Smith 44df4397b0SStefano Zampini #include <petscsystypes.h> 45df4397b0SStefano Zampini 46d382aafbSBarry Smith /* ========================================================================== */ 47d382aafbSBarry Smith 48d382aafbSBarry Smith /* 49d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 50d382aafbSBarry Smith 51d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 52d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 53d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 54d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 55d382aafbSBarry Smith mpicxx.h directly in their code 56d382aafbSBarry Smith */ 57fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 58d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 59fa9e63e2SJed Brown #endif 60fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 61d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 62fa9e63e2SJed Brown #endif 63e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 64e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 65e771154cSJed Brown #else 662c8e378dSBarry Smith #include <mpi.h> 67e771154cSJed Brown #endif 6865013866SBarry Smith 69d382aafbSBarry Smith /* 70a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 71a7886beaSBarry Smith This usually happens because 72a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 73a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 74a7886beaSBarry Smith */ 75a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 766524c165SJacob Faibussowitsch #ifndef MPIUNI_H 77a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 78a7886beaSBarry Smith #endif 7941f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 8041f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 8141f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8241f4af4cSSatish Balay #elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8341f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8441f4af4cSSatish Balay #endif 8541f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8641f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8741f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8841f4af4cSSatish Balay #elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8941f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 9041f4af4cSSatish Balay #endif 91a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9241f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 93a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 941c284764SMin RK #elif (MPICH_NUMVERSION / 100000000 != PETSC_HAVE_MPICH_NUMVERSION / 100000000) || (MPICH_NUMVERSION / 100000 < PETSC_HAVE_MPICH_NUMVERSION / 100000) || (MPICH_NUMVERSION / 100000 == PETSC_HAVE_MPICH_NUMVERSION / 100000 && MPICH_NUMVERSION % 100000 / 1000 < PETSC_HAVE_MPICH_NUMVERSION % 100000 / 1000) 95a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 96a7886beaSBarry Smith #endif 97a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 98a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 99a7886beaSBarry Smith #error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 1001c284764SMin RK #elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 101c3ac57cfSSatish Balay #error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 102a7886beaSBarry Smith #endif 103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 104d97fd468SStefano Zampini #if !defined(MSMPI_VER) 105d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 106d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 107d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 108d97fd468SStefano Zampini #endif 109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 110d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 111a7886beaSBarry Smith #endif 112a7886beaSBarry Smith 113a7886beaSBarry Smith /* 1142981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 115d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 116d382aafbSBarry Smith */ 117d382aafbSBarry Smith #include <stdio.h> 118d382aafbSBarry Smith 119d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 120d382aafbSBarry Smith #if !defined(MPIAPI) 121d382aafbSBarry Smith #define MPIAPI 122d382aafbSBarry Smith #endif 123d382aafbSBarry Smith 12493d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_ENUM PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscEnum); 12593d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_BOOL PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscBool); 126e28ce29aSPatrick Sanan 127e28ce29aSPatrick Sanan /*MC 12887497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 129e28ce29aSPatrick Sanan 130e28ce29aSPatrick Sanan Notes: 13187497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 132e28ce29aSPatrick Sanan 133e28ce29aSPatrick Sanan Level: beginner 134e28ce29aSPatrick Sanan 135db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 136e28ce29aSPatrick Sanan M*/ 137e28ce29aSPatrick Sanan 1387cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 139b7b8f77aSBarry Smith 140d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 141bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 142d382aafbSBarry Smith #else 143d382aafbSBarry Smith #define MPIU_INT MPI_INT 144d382aafbSBarry Smith #endif 145d382aafbSBarry Smith 146503cfb0cSBarry Smith /* 147503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 148503cfb0cSBarry Smith */ 14993d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_SIZE_T PETSC_ATTRIBUTE_MPI_TYPE_TAG(size_t); 150d382aafbSBarry Smith 151d382aafbSBarry Smith /* 152d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 153d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 154d382aafbSBarry Smith */ 155014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 156d382aafbSBarry Smith 157d382aafbSBarry Smith /* 158d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 159d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 160d382aafbSBarry Smith */ 161014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 162d382aafbSBarry Smith 163c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 164c8b9133aSSatish Balay 1655c993f7fSStefano Zampini #if defined(__NEC__) 1665c993f7fSStefano Zampini #define PetscPragmaSIMD _Pragma("_NEC ivdep") 1675c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 168c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("vector") 1691dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 170c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("GCC ivdep") 171e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 172e5518150SSatish Balay #if defined(_MSC_VER) 173160a5775SAli Reza Khaz'ali #define PetscPragmaSIMD __pragma(omp simd) 174e5518150SSatish Balay #else 175e5518150SSatish Balay #define PetscPragmaSIMD _Pragma("omp simd") 176e5518150SSatish Balay #endif 177c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 178c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("_CRI ivdep") 179c8b9133aSSatish Balay #else 180c8b9133aSSatish Balay #define PetscPragmaSIMD 181c8b9133aSSatish Balay #endif 182c8b9133aSSatish Balay 183d382aafbSBarry Smith /* 184*dc07da0dSStefano Zampini Handle inclusion when using clang compiler with CUDA support 185*dc07da0dSStefano Zampini __float128 is not available for the device 186*dc07da0dSStefano Zampini */ 187*dc07da0dSStefano Zampini #if defined(__clang__) && defined(__CUDA_ARCH__) 188*dc07da0dSStefano Zampini #define PETSC_SKIP_REAL___FLOAT128 189*dc07da0dSStefano Zampini #endif 190*dc07da0dSStefano Zampini 191*dc07da0dSStefano Zampini /* 192d382aafbSBarry Smith Declare extern C stuff after including external header files 193d382aafbSBarry Smith */ 194d382aafbSBarry Smith 1956edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 1968b49ba18SBarry Smith /* 197390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 1988b49ba18SBarry Smith */ 1998b49ba18SBarry Smith #include <petscmath.h> 2008b49ba18SBarry Smith 201d382aafbSBarry Smith /*MC 2020298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 203d382aafbSBarry Smith 204d382aafbSBarry Smith Level: beginner 205d382aafbSBarry Smith 206e28ce29aSPatrick Sanan Note: 20787497f52SBarry Smith Accepted by many PETSc functions to not set a parameter and instead use some default 208d382aafbSBarry Smith 20987497f52SBarry Smith Fortran Note: 21087497f52SBarry Smith This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 211d382aafbSBarry Smith 212db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 213d382aafbSBarry Smith 214d382aafbSBarry Smith M*/ 215f3fa974cSJacob Faibussowitsch #define PETSC_IGNORE PETSC_NULLPTR 216f3fa974cSJacob Faibussowitsch #define PETSC_NULL PETSC_DEPRECATED_MACRO("GCC warning \"PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)\"") PETSC_NULLPTR 217c528d872SBarry Smith 218d382aafbSBarry Smith /*MC 219557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 220557d4da8SBarry Smith where you wish PETSc to use the default. 221557d4da8SBarry Smith 222557d4da8SBarry Smith Level: beginner 223557d4da8SBarry Smith 224db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 225557d4da8SBarry Smith 226557d4da8SBarry Smith M*/ 227557d4da8SBarry Smith 228557d4da8SBarry Smith /*MC 229d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 230d382aafbSBarry Smith where you wish PETSc to compute the required value. 231d382aafbSBarry Smith 232d382aafbSBarry Smith Level: beginner 233d382aafbSBarry Smith 234e28ce29aSPatrick Sanan Developer Note: 23587497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 23687497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 237557d4da8SBarry Smith 238db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 239d382aafbSBarry Smith 240d382aafbSBarry Smith M*/ 241d382aafbSBarry Smith 242d382aafbSBarry Smith /*MC 243557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 244557d4da8SBarry Smith where you wish PETSc to use the default. 245557d4da8SBarry Smith 246557d4da8SBarry Smith Level: beginner 247557d4da8SBarry Smith 24887497f52SBarry Smith Fortran Note: 24987497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 250557d4da8SBarry Smith 251db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 252557d4da8SBarry Smith 253557d4da8SBarry Smith M*/ 254f3fa974cSJacob Faibussowitsch enum { 255f3fa974cSJacob Faibussowitsch PETSC_DECIDE = -1, 256f3fa974cSJacob Faibussowitsch PETSC_DETERMINE = PETSC_DECIDE, 257f3fa974cSJacob Faibussowitsch PETSC_DEFAULT = -2 258f3fa974cSJacob Faibussowitsch }; 259557d4da8SBarry Smith 260557d4da8SBarry Smith /*MC 26187497f52SBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents 262ea8fe74dSBarry Smith all the processes that PETSc knows about. 263d382aafbSBarry Smith 264d382aafbSBarry Smith Level: beginner 265d382aafbSBarry Smith 266e28ce29aSPatrick Sanan Notes: 26787497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 26887497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 26987497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 27087497f52SBarry Smith PetscInitialize(), but after `MPI_Init()` has been called. 271a990b902SBarry Smith 27287497f52SBarry Smith The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()` 273a990b902SBarry Smith is called because it may not have a valid value yet. 274d382aafbSBarry Smith 275db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 276d382aafbSBarry Smith 277d382aafbSBarry Smith M*/ 278014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 279d382aafbSBarry Smith 280d382aafbSBarry Smith /*MC 28187497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 282d382aafbSBarry Smith 283d382aafbSBarry Smith Level: beginner 284d382aafbSBarry Smith 285e28ce29aSPatrick Sanan Notes: 286e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 287a990b902SBarry Smith 288db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 289d382aafbSBarry Smith 290d382aafbSBarry Smith M*/ 291d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 292d382aafbSBarry Smith 2936de5d289SStefano Zampini /*MC 2946de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 29587497f52SBarry Smith MPI with `MPI_Init_thread()`. 2966de5d289SStefano Zampini 2976de5d289SStefano Zampini Level: beginner 2986de5d289SStefano Zampini 2996de5d289SStefano Zampini Notes: 30087497f52SBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`. 3016de5d289SStefano Zampini 302db781477SPatrick Sanan .seealso: `PetscInitialize()` 3036de5d289SStefano Zampini 3046de5d289SStefano Zampini M*/ 3056de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3066de5d289SStefano Zampini 307d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3088ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 309014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 310014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3114cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 312d382aafbSBarry Smith 313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 31657f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 31757f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 318d382aafbSBarry Smith 31959e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 32059e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 32159e55d94SJunchao Zhang #endif 32259e55d94SJunchao Zhang 32371438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 32471438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 32571438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 32671438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 32771438e86SJunchao Zhang #endif 32871438e86SJunchao Zhang 329540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 330540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 331540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 332540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 333540e20f2SPierre Jolivet #endif 334540e20f2SPierre Jolivet 335d382aafbSBarry Smith /*MC 33687497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 337d382aafbSBarry Smith 338eca87e8dSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 340eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 341eca87e8dSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameter: 345d382aafbSBarry Smith . m - number of bytes to allocate 346d382aafbSBarry Smith 347d382aafbSBarry Smith Output Parameter: 348d382aafbSBarry Smith . result - memory allocated 349d382aafbSBarry Smith 350d382aafbSBarry Smith Level: beginner 351d382aafbSBarry Smith 35249d7da52SJed Brown Notes: 35349d7da52SJed Brown Memory is always allocated at least double aligned 354d382aafbSBarry Smith 35587497f52SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`. 356d382aafbSBarry Smith 357db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 358d382aafbSBarry Smith 359d382aafbSBarry Smith M*/ 360071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 361d382aafbSBarry Smith 362d382aafbSBarry Smith /*MC 363d5b43468SJose E. Roman PetscRealloc - Reallocates memory 3643221ece2SMatthew G. Knepley 3653221ece2SMatthew G. Knepley Synopsis: 3663221ece2SMatthew G. Knepley #include <petscsys.h> 3673221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3683221ece2SMatthew G. Knepley 3693221ece2SMatthew G. Knepley Not Collective 3703221ece2SMatthew G. Knepley 3713221ece2SMatthew G. Knepley Input Parameters: 3723221ece2SMatthew G. Knepley + m - number of bytes to allocate 37392f119d6SBarry Smith - result - previous memory 3743221ece2SMatthew G. Knepley 3753221ece2SMatthew G. Knepley Output Parameter: 3763221ece2SMatthew G. Knepley . result - new memory allocated 3773221ece2SMatthew G. Knepley 3783221ece2SMatthew G. Knepley Level: developer 3793221ece2SMatthew G. Knepley 3803221ece2SMatthew G. Knepley Notes: 3813221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 3823221ece2SMatthew G. Knepley 383db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 3843221ece2SMatthew G. Knepley 3853221ece2SMatthew G. Knepley M*/ 3863221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 3873221ece2SMatthew G. Knepley 3883221ece2SMatthew G. Knepley /*MC 38987497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 390d382aafbSBarry Smith 391d382aafbSBarry Smith Synopsis: 392aaa7dc30SBarry Smith #include <petscsys.h> 393d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 394d382aafbSBarry Smith 395eca87e8dSBarry Smith Not Collective 396eca87e8dSBarry Smith 397eca87e8dSBarry Smith Input Parameters: 398eca87e8dSBarry Smith . addr - address to align (any pointer type) 399eca87e8dSBarry Smith 400d382aafbSBarry Smith Level: developer 401d382aafbSBarry Smith 402db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 403d382aafbSBarry Smith 404d382aafbSBarry Smith M*/ 405f3fa974cSJacob Faibussowitsch #define PetscAddrAlign(a) ((void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1))) 406d382aafbSBarry Smith 407d382aafbSBarry Smith /*MC 40887497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4098f51dc47SJunchao Zhang 4108f51dc47SJunchao Zhang Synopsis: 4118f51dc47SJunchao Zhang #include <petscsys.h> 4128f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4138f51dc47SJunchao Zhang 4148f51dc47SJunchao Zhang Not Collective 4158f51dc47SJunchao Zhang 4168f51dc47SJunchao Zhang Input Parameter: 4178f51dc47SJunchao Zhang . m - number of bytes to allocate 4188f51dc47SJunchao Zhang 4198f51dc47SJunchao Zhang Output Parameter: 4208f51dc47SJunchao Zhang . result - memory allocated 4218f51dc47SJunchao Zhang 4228f51dc47SJunchao Zhang Level: beginner 4238f51dc47SJunchao Zhang 4248f51dc47SJunchao Zhang Notes: 4258f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4268f51dc47SJunchao Zhang 4278f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4288f51dc47SJunchao Zhang 429db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4308f51dc47SJunchao Zhang 4318f51dc47SJunchao Zhang M*/ 432f3fa974cSJacob Faibussowitsch #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)m), (result)) 4338f51dc47SJunchao Zhang 4348f51dc47SJunchao Zhang /*MC 43587497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 436d382aafbSBarry Smith 437eca87e8dSBarry Smith Synopsis: 438aaa7dc30SBarry Smith #include <petscsys.h> 439785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 440785e854fSJed Brown 441785e854fSJed Brown Not Collective 442785e854fSJed Brown 443785e854fSJed Brown Input Parameter: 444390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 445785e854fSJed Brown 446785e854fSJed Brown Output Parameter: 4471fe1b817SJunchao Zhang . r1 - memory allocated 448785e854fSJed Brown 449e28ce29aSPatrick Sanan Note: 450e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 45187497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 452390e1bf2SBarry Smith $ PetscInt *id; 453390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 454390e1bf2SBarry Smith not 455390e1bf2SBarry Smith $ PetscInt *id; 456390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 457390e1bf2SBarry Smith 45887497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 459390e1bf2SBarry Smith 460390e1bf2SBarry Smith Level: beginner 461785e854fSJed Brown 462db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 463785e854fSJed Brown 464785e854fSJed Brown M*/ 465f3fa974cSJacob Faibussowitsch #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 466785e854fSJed Brown 467785e854fSJed Brown /*MC 46887497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4691795a4d1SJed Brown 4701795a4d1SJed Brown Synopsis: 471aaa7dc30SBarry Smith #include <petscsys.h> 4721795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4731795a4d1SJed Brown 4741795a4d1SJed Brown Not Collective 4751795a4d1SJed Brown 4761795a4d1SJed Brown Input Parameter: 4771795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 4781795a4d1SJed Brown 4791795a4d1SJed Brown Output Parameter: 4801fe1b817SJunchao Zhang . r1 - memory allocated 4811795a4d1SJed Brown 482e28ce29aSPatrick Sanan Notes: 48387497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 484390e1bf2SBarry Smith 485390e1bf2SBarry Smith Level: beginner 4861795a4d1SJed Brown 487db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 4881795a4d1SJed Brown 4891795a4d1SJed Brown M*/ 490f3fa974cSJacob Faibussowitsch #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 4911795a4d1SJed Brown 4921795a4d1SJed Brown /*MC 49387497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 494d382aafbSBarry Smith 495eca87e8dSBarry Smith Synopsis: 496aaa7dc30SBarry Smith #include <petscsys.h> 497dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 498eca87e8dSBarry Smith 499eca87e8dSBarry Smith Not Collective 500eca87e8dSBarry Smith 501d8d19677SJose E. Roman Input Parameters: 502d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 503dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 504d382aafbSBarry Smith 505d8d19677SJose E. Roman Output Parameters: 506d382aafbSBarry Smith + r1 - memory allocated in first chunk 507d382aafbSBarry Smith - r2 - memory allocated in second chunk 508d382aafbSBarry Smith 509d382aafbSBarry Smith Level: developer 510d382aafbSBarry Smith 511db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 512d382aafbSBarry Smith 513d382aafbSBarry Smith M*/ 514f3fa974cSJacob Faibussowitsch #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 515d382aafbSBarry Smith 516d382aafbSBarry Smith /*MC 51787497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 518d382aafbSBarry Smith 519eca87e8dSBarry Smith Synopsis: 520aaa7dc30SBarry Smith #include <petscsys.h> 5211795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 522eca87e8dSBarry Smith 523eca87e8dSBarry Smith Not Collective 524eca87e8dSBarry Smith 525d8d19677SJose E. Roman Input Parameters: 526d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5271795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5281795a4d1SJed Brown 529d8d19677SJose E. Roman Output Parameters: 5301795a4d1SJed Brown + r1 - memory allocated in first chunk 5311795a4d1SJed Brown - r2 - memory allocated in second chunk 5321795a4d1SJed Brown 5331795a4d1SJed Brown Level: developer 5341795a4d1SJed Brown 535db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5361795a4d1SJed Brown 5371795a4d1SJed Brown M*/ 538f3fa974cSJacob Faibussowitsch #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 5391795a4d1SJed Brown 5401795a4d1SJed Brown /*MC 54187497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 542d382aafbSBarry Smith 543d382aafbSBarry Smith Synopsis: 544aaa7dc30SBarry Smith #include <petscsys.h> 545dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 546d382aafbSBarry Smith 547d382aafbSBarry Smith Not Collective 548d382aafbSBarry Smith 549d8d19677SJose E. Roman Input Parameters: 550d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 551d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 552dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 553d382aafbSBarry Smith 554d8d19677SJose E. Roman Output Parameters: 555d382aafbSBarry Smith + r1 - memory allocated in first chunk 556d382aafbSBarry Smith . r2 - memory allocated in second chunk 557d382aafbSBarry Smith - r3 - memory allocated in third chunk 558d382aafbSBarry Smith 559d382aafbSBarry Smith Level: developer 560d382aafbSBarry Smith 561db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 562d382aafbSBarry Smith 563d382aafbSBarry Smith M*/ 564f3fa974cSJacob Faibussowitsch #define PetscMalloc3(m1, r1, m2, r2, m3, r3) \ 565f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 566d382aafbSBarry Smith 567d382aafbSBarry Smith /*MC 56887497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 569d382aafbSBarry Smith 570eca87e8dSBarry Smith Synopsis: 571aaa7dc30SBarry Smith #include <petscsys.h> 5721795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 573eca87e8dSBarry Smith 574eca87e8dSBarry Smith Not Collective 575eca87e8dSBarry Smith 576d8d19677SJose E. Roman Input Parameters: 577d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 578d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 5791795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 5801795a4d1SJed Brown 581d8d19677SJose E. Roman Output Parameters: 5821795a4d1SJed Brown + r1 - memory allocated in first chunk 5831795a4d1SJed Brown . r2 - memory allocated in second chunk 5841795a4d1SJed Brown - r3 - memory allocated in third chunk 5851795a4d1SJed Brown 5861795a4d1SJed Brown Level: developer 5871795a4d1SJed Brown 588db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 5891795a4d1SJed Brown 5901795a4d1SJed Brown M*/ 591f3fa974cSJacob Faibussowitsch #define PetscCalloc3(m1, r1, m2, r2, m3, r3) \ 592f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 5931795a4d1SJed Brown 5941795a4d1SJed Brown /*MC 59587497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 596d382aafbSBarry Smith 597d382aafbSBarry Smith Synopsis: 598aaa7dc30SBarry Smith #include <petscsys.h> 599dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 600d382aafbSBarry Smith 601d382aafbSBarry Smith Not Collective 602d382aafbSBarry Smith 603d8d19677SJose E. Roman Input Parameters: 604d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 605d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 606d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 607dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 608d382aafbSBarry Smith 609d8d19677SJose E. Roman Output Parameters: 610d382aafbSBarry Smith + r1 - memory allocated in first chunk 611d382aafbSBarry Smith . r2 - memory allocated in second chunk 612d382aafbSBarry Smith . r3 - memory allocated in third chunk 613d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 614d382aafbSBarry Smith 615d382aafbSBarry Smith Level: developer 616d382aafbSBarry Smith 617db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 618d382aafbSBarry Smith 619d382aafbSBarry Smith M*/ 6209371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 621f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 622d382aafbSBarry Smith 623d382aafbSBarry Smith /*MC 62487497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 625d382aafbSBarry Smith 626eca87e8dSBarry Smith Synopsis: 627aaa7dc30SBarry Smith #include <petscsys.h> 6281795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 629eca87e8dSBarry Smith 630eca87e8dSBarry Smith Not Collective 631eca87e8dSBarry Smith 632e28ce29aSPatrick Sanan Input Parameters: 633d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 634d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 635d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6361795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6371795a4d1SJed Brown 638e28ce29aSPatrick Sanan Output Parameters: 6391795a4d1SJed Brown + r1 - memory allocated in first chunk 6401795a4d1SJed Brown . r2 - memory allocated in second chunk 6411795a4d1SJed Brown . r3 - memory allocated in third chunk 6421795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6431795a4d1SJed Brown 6441795a4d1SJed Brown Level: developer 6451795a4d1SJed Brown 646db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6471795a4d1SJed Brown 6481795a4d1SJed Brown M*/ 6499371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 650f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 6511795a4d1SJed Brown 6521795a4d1SJed Brown /*MC 65387497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 654d382aafbSBarry Smith 655d382aafbSBarry Smith Synopsis: 656aaa7dc30SBarry Smith #include <petscsys.h> 657dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 658d382aafbSBarry Smith 659d382aafbSBarry Smith Not Collective 660d382aafbSBarry Smith 661e28ce29aSPatrick Sanan Input Parameters: 662d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 663d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 664d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 665d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 666dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 667d382aafbSBarry Smith 668e28ce29aSPatrick Sanan Output Parameters: 669d382aafbSBarry Smith + r1 - memory allocated in first chunk 670d382aafbSBarry Smith . r2 - memory allocated in second chunk 671d382aafbSBarry Smith . r3 - memory allocated in third chunk 672d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 673d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 674d382aafbSBarry Smith 675d382aafbSBarry Smith Level: developer 676d382aafbSBarry Smith 677db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 678d382aafbSBarry Smith 679d382aafbSBarry Smith M*/ 6809371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 681f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 682d382aafbSBarry Smith 683d382aafbSBarry Smith /*MC 68487497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 685d382aafbSBarry Smith 686eca87e8dSBarry Smith Synopsis: 687aaa7dc30SBarry Smith #include <petscsys.h> 6881795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 689eca87e8dSBarry Smith 690eca87e8dSBarry Smith Not Collective 691eca87e8dSBarry Smith 692e28ce29aSPatrick Sanan Input Parameters: 693d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 694d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 695d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 696d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 6971795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 6981795a4d1SJed Brown 699e28ce29aSPatrick Sanan Output Parameters: 7001795a4d1SJed Brown + r1 - memory allocated in first chunk 7011795a4d1SJed Brown . r2 - memory allocated in second chunk 7021795a4d1SJed Brown . r3 - memory allocated in third chunk 7031795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7041795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7051795a4d1SJed Brown 7061795a4d1SJed Brown Level: developer 7071795a4d1SJed Brown 708db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7091795a4d1SJed Brown 7101795a4d1SJed Brown M*/ 7119371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 712f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 713d382aafbSBarry Smith 714d382aafbSBarry Smith /*MC 71587497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 716d382aafbSBarry Smith 717d382aafbSBarry Smith Synopsis: 718aaa7dc30SBarry Smith #include <petscsys.h> 719dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 720d382aafbSBarry Smith 721d382aafbSBarry Smith Not Collective 722d382aafbSBarry Smith 723e28ce29aSPatrick Sanan Input Parameters: 724d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 725d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 726d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 727d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 728d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 729dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 730d382aafbSBarry Smith 731e28ce29aSPatrick Sanan Output Parameteasr: 732d382aafbSBarry Smith + r1 - memory allocated in first chunk 733d382aafbSBarry Smith . r2 - memory allocated in second chunk 734d382aafbSBarry Smith . r3 - memory allocated in third chunk 735d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 736d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 737d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 738d382aafbSBarry Smith 739d382aafbSBarry Smith Level: developer 740d382aafbSBarry Smith 741db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 742d382aafbSBarry Smith 743d382aafbSBarry Smith M*/ 7449371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 745f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 746d382aafbSBarry Smith 747d382aafbSBarry Smith /*MC 74887497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 749d382aafbSBarry Smith 750eca87e8dSBarry Smith Synopsis: 751aaa7dc30SBarry Smith #include <petscsys.h> 7521795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 753eca87e8dSBarry Smith 754eca87e8dSBarry Smith Not Collective 755eca87e8dSBarry Smith 756e28ce29aSPatrick Sanan Input Parameters: 757d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 758d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 759d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 760d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 761d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7621795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7631795a4d1SJed Brown 764e28ce29aSPatrick Sanan Output Parameters: 7651795a4d1SJed Brown + r1 - memory allocated in first chunk 7661795a4d1SJed Brown . r2 - memory allocated in second chunk 7671795a4d1SJed Brown . r3 - memory allocated in third chunk 7681795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7691795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7701795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7711795a4d1SJed Brown 7721795a4d1SJed Brown Level: developer 7731795a4d1SJed Brown 774db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7751795a4d1SJed Brown 7761795a4d1SJed Brown M*/ 7779371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 778f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 7791795a4d1SJed Brown 7801795a4d1SJed Brown /*MC 78187497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 782d382aafbSBarry Smith 783d382aafbSBarry Smith Synopsis: 784aaa7dc30SBarry Smith #include <petscsys.h> 785dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 786d382aafbSBarry Smith 787d382aafbSBarry Smith Not Collective 788d382aafbSBarry Smith 789e28ce29aSPatrick Sanan Input Parameters: 790d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 791d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 792d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 793d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 794d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 795d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 796dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 797d382aafbSBarry Smith 798e28ce29aSPatrick Sanan Output Parameters: 799d382aafbSBarry Smith + r1 - memory allocated in first chunk 800d382aafbSBarry Smith . r2 - memory allocated in second chunk 801d382aafbSBarry Smith . r3 - memory allocated in third chunk 802d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 803d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 804d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 805eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 806d382aafbSBarry Smith 807d382aafbSBarry Smith Level: developer 808d382aafbSBarry Smith 809db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 810d382aafbSBarry Smith 811d382aafbSBarry Smith M*/ 8129371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 813f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 814d382aafbSBarry Smith 815d382aafbSBarry Smith /*MC 81687497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8171795a4d1SJed Brown 8181795a4d1SJed Brown Synopsis: 819aaa7dc30SBarry Smith #include <petscsys.h> 8201795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8211795a4d1SJed Brown 8221795a4d1SJed Brown Not Collective 8231795a4d1SJed Brown 824e28ce29aSPatrick Sanan Input Parameters: 8251795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8261795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8271795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8281795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8291795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8301795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8311795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8321795a4d1SJed Brown 833e28ce29aSPatrick Sanan Output Parameters: 8341795a4d1SJed Brown + r1 - memory allocated in first chunk 8351795a4d1SJed Brown . r2 - memory allocated in second chunk 8361795a4d1SJed Brown . r3 - memory allocated in third chunk 8371795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8381795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8391795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8401795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8411795a4d1SJed Brown 8421795a4d1SJed Brown Level: developer 8431795a4d1SJed Brown 844db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8451795a4d1SJed Brown 8461795a4d1SJed Brown M*/ 8479371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 848f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 8491795a4d1SJed Brown 8501795a4d1SJed Brown /*MC 85187497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 852d382aafbSBarry Smith 853eca87e8dSBarry Smith Synopsis: 854aaa7dc30SBarry Smith #include <petscsys.h> 855b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 856eca87e8dSBarry Smith 857eca87e8dSBarry Smith Not Collective 858eca87e8dSBarry Smith 859d382aafbSBarry Smith Output Parameter: 860b00a9115SJed Brown . result - memory allocated, sized to match pointer type 861d382aafbSBarry Smith 862d382aafbSBarry Smith Level: beginner 863d382aafbSBarry Smith 864fea72eb4SStefano Zampini .seealso: `PetscFree()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc1()` 865d382aafbSBarry Smith 866d382aafbSBarry Smith M*/ 867b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 868ad0619ddSBarry Smith 8694dfa11a4SJacob Faibussowitsch #define PetscNewLog(o, b) PETSC_DEPRECATED_MACRO("GCC warning \"PetscNewLog is deprecated, use PetscNew() instead (since version 3.18)\"") PetscNew((b)) 870d382aafbSBarry Smith 871d382aafbSBarry Smith /*MC 872d382aafbSBarry Smith PetscFree - Frees memory 873d382aafbSBarry Smith 874eca87e8dSBarry Smith Synopsis: 875aaa7dc30SBarry Smith #include <petscsys.h> 876eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 877eca87e8dSBarry Smith 878eca87e8dSBarry Smith Not Collective 879eca87e8dSBarry Smith 880d382aafbSBarry Smith Input Parameter: 8817f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 882d382aafbSBarry Smith 883d382aafbSBarry Smith Level: beginner 884d382aafbSBarry Smith 88549d7da52SJed Brown Notes: 88687497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 887390e1bf2SBarry Smith 88887497f52SBarry Smith It is safe to call `PetscFree()` on a NULL pointer. 889d382aafbSBarry Smith 890fea72eb4SStefano Zampini .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc1()` 891d382aafbSBarry Smith 892d382aafbSBarry Smith M*/ 893f3fa974cSJacob Faibussowitsch #define PetscFree(a) ((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = PETSC_NULLPTR, 0)) 894d382aafbSBarry Smith 895d382aafbSBarry Smith /*MC 89687497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 897d382aafbSBarry Smith 898eca87e8dSBarry Smith Synopsis: 899aaa7dc30SBarry Smith #include <petscsys.h> 900eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 901eca87e8dSBarry Smith 902eca87e8dSBarry Smith Not Collective 903eca87e8dSBarry Smith 904e28ce29aSPatrick Sanan Input Parameters: 905d382aafbSBarry Smith + memory1 - memory to free 906d382aafbSBarry Smith - memory2 - 2nd memory to free 907d382aafbSBarry Smith 908d382aafbSBarry Smith Level: developer 909d382aafbSBarry Smith 91095452b02SPatrick Sanan Notes: 91187497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 912d382aafbSBarry Smith 913db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 914d382aafbSBarry Smith 915d382aafbSBarry Smith M*/ 916ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 917d382aafbSBarry Smith 918d382aafbSBarry Smith /*MC 91987497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 920d382aafbSBarry Smith 921eca87e8dSBarry Smith Synopsis: 922aaa7dc30SBarry Smith #include <petscsys.h> 923eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 924eca87e8dSBarry Smith 925eca87e8dSBarry Smith Not Collective 926eca87e8dSBarry Smith 927e28ce29aSPatrick Sanan Input Parameters: 928d382aafbSBarry Smith + memory1 - memory to free 929d382aafbSBarry Smith . memory2 - 2nd memory to free 930d382aafbSBarry Smith - memory3 - 3rd memory to free 931d382aafbSBarry Smith 932d382aafbSBarry Smith Level: developer 933d382aafbSBarry Smith 93495452b02SPatrick Sanan Notes: 93587497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 936d382aafbSBarry Smith 937db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 938d382aafbSBarry Smith 939d382aafbSBarry Smith M*/ 940ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 941d382aafbSBarry Smith 942d382aafbSBarry Smith /*MC 94387497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 944d382aafbSBarry Smith 945eca87e8dSBarry Smith Synopsis: 946aaa7dc30SBarry Smith #include <petscsys.h> 947eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 948eca87e8dSBarry Smith 949eca87e8dSBarry Smith Not Collective 950eca87e8dSBarry Smith 951e28ce29aSPatrick Sanan Input Parameters: 952d382aafbSBarry Smith + m1 - memory to free 953d382aafbSBarry Smith . m2 - 2nd memory to free 954d382aafbSBarry Smith . m3 - 3rd memory to free 955d382aafbSBarry Smith - m4 - 4th memory to free 956d382aafbSBarry Smith 957d382aafbSBarry Smith Level: developer 958d382aafbSBarry Smith 95995452b02SPatrick Sanan Notes: 96087497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 961d382aafbSBarry Smith 962db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 963d382aafbSBarry Smith 964d382aafbSBarry Smith M*/ 965ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 966d382aafbSBarry Smith 967d382aafbSBarry Smith /*MC 96887497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 969d382aafbSBarry Smith 970eca87e8dSBarry Smith Synopsis: 971aaa7dc30SBarry Smith #include <petscsys.h> 972eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 973eca87e8dSBarry Smith 974eca87e8dSBarry Smith Not Collective 975eca87e8dSBarry Smith 976e28ce29aSPatrick Sanan Input Parameters: 977d382aafbSBarry Smith + m1 - memory to free 978d382aafbSBarry Smith . m2 - 2nd memory to free 979d382aafbSBarry Smith . m3 - 3rd memory to free 980d382aafbSBarry Smith . m4 - 4th memory to free 981d382aafbSBarry Smith - m5 - 5th memory to free 982d382aafbSBarry Smith 983d382aafbSBarry Smith Level: developer 984d382aafbSBarry Smith 98595452b02SPatrick Sanan Notes: 98687497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 987d382aafbSBarry Smith 988db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 989d382aafbSBarry Smith 990d382aafbSBarry Smith M*/ 991ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 992d382aafbSBarry Smith 993d382aafbSBarry Smith /*MC 99487497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 995d382aafbSBarry Smith 996eca87e8dSBarry Smith Synopsis: 997aaa7dc30SBarry Smith #include <petscsys.h> 998eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 999eca87e8dSBarry Smith 1000eca87e8dSBarry Smith Not Collective 1001eca87e8dSBarry Smith 1002e28ce29aSPatrick Sanan Input Parameters: 1003d382aafbSBarry Smith + m1 - memory to free 1004d382aafbSBarry Smith . m2 - 2nd memory to free 1005d382aafbSBarry Smith . m3 - 3rd memory to free 1006d382aafbSBarry Smith . m4 - 4th memory to free 1007d382aafbSBarry Smith . m5 - 5th memory to free 1008d382aafbSBarry Smith - m6 - 6th memory to free 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith Level: developer 1011d382aafbSBarry Smith 101295452b02SPatrick Sanan Notes: 101387497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1014d382aafbSBarry Smith 1015db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith M*/ 1018ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith /*MC 102187497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1022d382aafbSBarry Smith 1023eca87e8dSBarry Smith Synopsis: 1024aaa7dc30SBarry Smith #include <petscsys.h> 1025eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1026eca87e8dSBarry Smith 1027eca87e8dSBarry Smith Not Collective 1028eca87e8dSBarry Smith 1029e28ce29aSPatrick Sanan Input Parameters: 1030d382aafbSBarry Smith + m1 - memory to free 1031d382aafbSBarry Smith . m2 - 2nd memory to free 1032d382aafbSBarry Smith . m3 - 3rd memory to free 1033d382aafbSBarry Smith . m4 - 4th memory to free 1034d382aafbSBarry Smith . m5 - 5th memory to free 1035d382aafbSBarry Smith . m6 - 6th memory to free 1036d382aafbSBarry Smith - m7 - 7th memory to free 1037d382aafbSBarry Smith 1038d382aafbSBarry Smith Level: developer 1039d382aafbSBarry Smith 104095452b02SPatrick Sanan Notes: 104187497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1042d382aafbSBarry Smith 1043db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1044db781477SPatrick Sanan `PetscMalloc7()` 1045d382aafbSBarry Smith 1046d382aafbSBarry Smith M*/ 1047ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1048d382aafbSBarry Smith 1049ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1050ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1051071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1052efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10533221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1054ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 105592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1056014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith /* 1059c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1060c1706be6SHong Zhang */ 1061c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1062c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 106331f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 106431f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 106531f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 106631f06eaaSHong Zhang #endif 106759af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 106859af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 106959af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 107059af0bd3SScott Kruger #endif 107159af0bd3SScott Kruger 1072a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 107336763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1074a5057860SBarry Smith 1075a5057860SBarry Smith /* 107666d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1077d382aafbSBarry Smith */ 1078014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 107992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1080014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1081014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1082e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1083e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 108492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 108592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1086efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 108792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 108892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1089608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1090608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1091d382aafbSBarry Smith 1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1093014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1094014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 10958e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1096d382aafbSBarry Smith 1097d382aafbSBarry Smith /* 1098d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1099d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1100d382aafbSBarry Smith functionality and/or error checking. 1101d382aafbSBarry Smith */ 1102014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void *, const void *, size_t, PetscBool *); 1103014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[], size_t *); 1104d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[], char, int *, char ***); 1105014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int, char **); 1106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[], const char[], PetscBool *); 1107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[], const char[], PetscBool *); 1108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[], const char[], PetscBool *); 1109014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[], const char[], size_t, PetscBool *); 1110014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[], const char[]); 1111014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[], const char[]); 1112a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[], const char[], size_t); 1113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[], const char[], size_t); 1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[], char, char *[]); 1115014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11162f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[], char, char *[]); 1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[], const char[], char *[]); 1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[], const char[], char *[]); 1120014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[], const char[], PetscBool *); 11212c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[], const char[], PetscBool *); 1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[], const char *const *, PetscInt *); 1123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[], char *[]); 112447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const *, char ***); 11256fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char ***); 11266991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt, const char *const *, char ***); 11276991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt, char ***); 1128014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm, const char[], char[], size_t); 1129d382aafbSBarry Smith 1130573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[], const char[], PetscBool *); 1131573b0fb4SBarry Smith 113298e514b7SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[], char, PetscToken *); 1133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken, char *[]); 1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken *); 1135d382aafbSBarry Smith 1136e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[], const char[], char, PetscBool *); 113780b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char[]); 1138a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt, const char *const *, const char *, PetscInt *, PetscBool *); 1139a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const *, const char *, PetscEnum *, PetscBool *); 1140a53986e1SJed Brown 1141d382aafbSBarry Smith /* 1142d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1143d382aafbSBarry Smith */ 1144367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1145570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1146de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1147014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1148014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1149d9822059SBarry Smith #else 1150de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1151d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1152d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1153d9822059SBarry Smith #endif 115462e5d2d2SJDBetteridge PETSC_EXTERN MPI_Op Petsc_Garbage_SetIntersectOp; 115562e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 115662e5d2d2SJDBetteridge 1157a2498233SPierre Jolivet #if (defined(PETSC_HAVE_REAL___FLOAT128) && !defined(PETSC_SKIP_REAL___FLOAT128)) || (defined(PETSC_HAVE_REAL___FP16) && !defined(PETSC_SKIP_REAL___FP16)) 1158613bf2b2SPierre Jolivet /*MC 11599e517322SPierre Jolivet MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with 11609e517322SPierre Jolivet custom MPI_Datatype `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1161613bf2b2SPierre Jolivet 1162613bf2b2SPierre Jolivet Level: advanced 1163613bf2b2SPierre Jolivet 1164613bf2b2SPierre Jolivet Developer Note: 1165613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1166613bf2b2SPierre Jolivet 1167613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1168613bf2b2SPierre Jolivet M*/ 11699e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1170613bf2b2SPierre Jolivet #endif 1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1172d382aafbSBarry Smith 117393d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 117493d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1175eb3f98d2SBarry Smith 1176639ff905SBarry Smith /* 1177639ff905SBarry Smith Defines PETSc error handling. 1178639ff905SBarry Smith */ 1179639ff905SBarry Smith #include <petscerror.h> 1180d382aafbSBarry Smith 1181660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1182660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1183660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1184660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1185660278c0SBarry Smith 1186f3fa974cSJacob Faibussowitsch #define PETSC_SMALLEST_CLASSID ((PetscClassId)1211211) 1187014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1188014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 119081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 119181256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 119281256985SMatthew G. Knepley 1193d382aafbSBarry Smith /* 1194d382aafbSBarry Smith Routines that get memory usage information from the OS 1195d382aafbSBarry Smith */ 1196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1199b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1200d382aafbSBarry Smith 1201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith /* 1204d382aafbSBarry Smith Initialization of PETSc 1205d382aafbSBarry Smith */ 1206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1208014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1209014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1210014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1211014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1212014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1216d382aafbSBarry Smith 1217014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1218607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1219d382aafbSBarry Smith 1220014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1224d382aafbSBarry Smith 1225a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1226a50e088cSMatthew G. Knepley 1227d382aafbSBarry Smith /* 1228d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12292981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1230d382aafbSBarry Smith */ 1231638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1232638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1233638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1234d382aafbSBarry Smith 1235d382aafbSBarry Smith /* 1236d382aafbSBarry Smith Functions that can act on any PETSc object. 1237d382aafbSBarry Smith */ 1238014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1255bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 1256f3fa974cSJacob Faibussowitsch #define PetscObjectComposeFunction(a, b, d) PetscObjectComposeFunction_Private((a), (b), (PetscVoidFunction)(d)) 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12590eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12600eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1262d382aafbSBarry Smith 1263665c2dedSJed Brown #include <petscviewertypes.h> 1264639ff905SBarry Smith #include <petscoptions.h> 1265639ff905SBarry Smith 1266608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1267608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1268608c71bfSMatthew G. Knepley 12690633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 12700633abcbSJed Brown 1271c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1272dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1273639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 12740005d66cSJed Brown #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFunction *)(fptr)) 12750005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1283685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1286013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 12874099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1289b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1292d382aafbSBarry Smith 1293e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 12947aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1295e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1296e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1297e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1298e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1299e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1300e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1301e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1302e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1303e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 130415681b3cSBarry Smith 1305ec7429eaSBarry Smith #else 13067aab2a10SBarry Smith #define PetscSAWsBlock() 0 1307e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1308e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj, flg) 0 1309e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1310e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1311e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1312e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1313e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1314e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1315e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 131615681b3cSBarry Smith 1317ec7429eaSBarry Smith #endif 1318b90c6cbeSBarry Smith 131982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 132082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 132182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1322258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1323258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1324258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1325258ec3d2SMatthew G. Knepley #endif 13267d5d4d99SBarry Smith 1327a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 1328a64a8e02SBarry Smith 1329dfb7d7afSStefano Zampini PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 1330140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1331140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1332140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1333140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1334140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1335140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1336d382aafbSBarry Smith 1337d382aafbSBarry Smith /* 1338503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1339d382aafbSBarry Smith link libraries that will be loaded as needed. 1340d382aafbSBarry Smith */ 1341a240a19fSJed Brown 1342a240a19fSJed Brown #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFunction)(fptr)) 1343ed170139SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], PetscVoidFunction); 1344140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13450e6b6b59SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListClear(PetscFunctionList); 13461c9cd337SJed Brown #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFunction *)(fptr)) 1347ed170139SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], PetscVoidFunction *); 134844ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1349140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1350140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1351140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13522e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13532e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1354d382aafbSBarry Smith 1355014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1363d382aafbSBarry Smith 1364d382aafbSBarry Smith /* 1365d382aafbSBarry Smith Useful utility routines 1366d382aafbSBarry Smith */ 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1369d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 137458b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 137558b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1376d382aafbSBarry Smith 137764ac3b0dSPatrick Sanan /*MC 137887497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1379503cfb0cSBarry Smith 138064ac3b0dSPatrick Sanan Level: beginner 138164ac3b0dSPatrick Sanan 1382a1cb98faSBarry Smith Note: 1383a1cb98faSBarry Smith This is useful in cases like 1384a1cb98faSBarry Smith .vb 1385a1cb98faSBarry Smith int *a; 1386a1cb98faSBarry Smith PetscBool flag = PetscNot(a) 1387a1cb98faSBarry Smith .ve 1388a1cb98faSBarry Smith where !a would not return a `PetscBool` because we cannot provide a cast from int to `PetscBool` in C. 1389a1cb98faSBarry Smith 1390a1cb98faSBarry Smith .seealso: `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 139164ac3b0dSPatrick Sanan M*/ 1392d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1393503cfb0cSBarry Smith 1394d382aafbSBarry Smith /*MC 1395d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1396d382aafbSBarry Smith 1397cd05f99aSJacob Faibussowitsch Not Collective, only applies on rank 0; No Fortran Support 1398cf53795eSBarry Smith 1399d382aafbSBarry Smith Synopsis: 1400aaa7dc30SBarry Smith #include <petscsys.h> 1401659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1402d382aafbSBarry Smith 1403d382aafbSBarry Smith Input Parameters: 1404659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1405d382aafbSBarry Smith . format - the usual printf() format string 1406659f7ba0SBarry Smith - args - arguments to be printed 1407d382aafbSBarry Smith 1408d382aafbSBarry Smith Level: developer 1409d382aafbSBarry Smith 1410659f7ba0SBarry Smith Note: 1411659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1412659f7ba0SBarry Smith 1413659f7ba0SBarry Smith To use, write your own function, for example, 1414659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1415659f7ba0SBarry Smith ${ 1416659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1417659f7ba0SBarry Smith $} 1418d5b43468SJose E. Roman then do the assignment 1419659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 142087497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1421659f7ba0SBarry Smith 142287497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1423d382aafbSBarry Smith 1424db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1425d382aafbSBarry Smith M*/ 14263ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1427d382aafbSBarry Smith 1428fcfd50ebSBarry Smith /* 1429fcfd50ebSBarry Smith Defines PETSc profiling. 1430fcfd50ebSBarry Smith */ 14312c8e378dSBarry Smith #include <petsclog.h> 1432fcfd50ebSBarry Smith 1433fcfd50ebSBarry Smith /* 1434fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1435fcfd50ebSBarry Smith */ 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14393ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14403ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14413ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14423ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14431b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1444fcfd50ebSBarry Smith 14453ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14463ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14473ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1448d382aafbSBarry Smith 1449d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1450d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1451d781fa04SBarry Smith 1452d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1454016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 145574ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1456d382aafbSBarry Smith #endif 1457d382aafbSBarry Smith 14583ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14593ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14600ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm, const char[], const char[], FILE **); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1465d382aafbSBarry Smith 1466014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1472b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1473d382aafbSBarry Smith 1474d382aafbSBarry Smith /* 1475d382aafbSBarry Smith For use in debuggers 1476d382aafbSBarry Smith */ 1477014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1478014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1482d382aafbSBarry Smith 1483a663daf8SBarry Smith #include <stddef.h> 1484a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1485d382aafbSBarry Smith #include <stdlib.h> 14866c7e564aSBarry Smith 14874a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1488d382aafbSBarry Smith #include <xmmintrin.h> 1489d382aafbSBarry Smith #endif 1490d382aafbSBarry Smith 1491d382aafbSBarry Smith /*@C 1492580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1493580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 149487497f52SBarry Smith take place correctly. Use `PetscMemcpy()` if the locations do not overlap 1495580bdb30SBarry Smith 1496580bdb30SBarry Smith Not Collective 1497580bdb30SBarry Smith 1498580bdb30SBarry Smith Input Parameters: 1499580bdb30SBarry Smith + b - pointer to initial memory space 1500580bdb30SBarry Smith . a - pointer to copy space 1501580bdb30SBarry Smith - n - length (in bytes) of space to copy 1502580bdb30SBarry Smith 1503580bdb30SBarry Smith Level: intermediate 1504580bdb30SBarry Smith 150587497f52SBarry Smith Notes: 150687497f52SBarry Smith `PetscArraymove()` is preferred 1507580bdb30SBarry Smith 150887497f52SBarry Smith This routine is analogous to `memmove()`. 150987497f52SBarry Smith 151087497f52SBarry Smith Developers Note: 151187497f52SBarry Smith This is inlined for performance 1512580bdb30SBarry Smith 1513db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1514db781477SPatrick Sanan `PetscArraymove()` 1515580bdb30SBarry Smith @*/ 1516d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a, const void *b, size_t n) 1517d71ae5a4SJacob Faibussowitsch { 1518580bdb30SBarry Smith PetscFunctionBegin; 1519f3fa974cSJacob Faibussowitsch if (PetscUnlikely((n == 0) || (a == b))) PetscFunctionReturn(0); 1520f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes to null pointer (Argument #1)", n); 1521f3fa974cSJacob Faibussowitsch PetscAssert(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes from a null pointer (Argument #2)", n); 1522f3fa974cSJacob Faibussowitsch #if PetscDefined(HAVE_MEMMOVE) 1523f3fa974cSJacob Faibussowitsch memmove((char *)a, (const char *)b, n); 1524f3fa974cSJacob Faibussowitsch #else 1525580bdb30SBarry Smith if (a < b) { 1526f3fa974cSJacob Faibussowitsch if (a <= b - n) { 1527f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1528f3fa974cSJacob Faibussowitsch } else { 1529f3fa974cSJacob Faibussowitsch const size_t ptr_diff = (size_t)(b - a); 1530f3fa974cSJacob Faibussowitsch 1531f3fa974cSJacob Faibussowitsch memcpy(a, b, ptr_diff); 1532f3fa974cSJacob Faibussowitsch PetscCall(PetscMemmove((void *)b, b + ptr_diff, n - ptr_diff)); 1533580bdb30SBarry Smith } 1534580bdb30SBarry Smith } else { 1535f3fa974cSJacob Faibussowitsch if (b <= a - n) { 1536f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1537f3fa974cSJacob Faibussowitsch } else { 1538f3fa974cSJacob Faibussowitsch const size_t ptr_diff = (size_t)(a - b); 1539f3fa974cSJacob Faibussowitsch 1540f3fa974cSJacob Faibussowitsch memcpy((void *)(b + n), b + (n - ptr_diff), ptr_diff); 1541f3fa974cSJacob Faibussowitsch PetscCall(PetscMemmove(a, b, n - ptr_diff)); 1542580bdb30SBarry Smith } 1543580bdb30SBarry Smith } 1544580bdb30SBarry Smith #endif 1545580bdb30SBarry Smith PetscFunctionReturn(0); 1546580bdb30SBarry Smith } 1547580bdb30SBarry Smith 1548d382aafbSBarry Smith /*@C 1549d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1550d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 155187497f52SBarry Smith `PetscMemmove()` in that case. 1552d382aafbSBarry Smith 1553d382aafbSBarry Smith Not Collective 1554d382aafbSBarry Smith 1555d382aafbSBarry Smith Input Parameters: 1556d382aafbSBarry Smith + b - pointer to initial memory space 1557d382aafbSBarry Smith - n - length (in bytes) of space to copy 1558d382aafbSBarry Smith 1559d382aafbSBarry Smith Output Parameter: 1560d382aafbSBarry Smith . a - pointer to copy space 1561d382aafbSBarry Smith 1562d382aafbSBarry Smith Level: intermediate 1563d382aafbSBarry Smith 1564d382aafbSBarry Smith Compile Option: 156587497f52SBarry Smith `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used 1566d382aafbSBarry Smith for memory copies on double precision values. 156787497f52SBarry Smith `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used 1568d382aafbSBarry Smith for memory copies on double precision values. 156987497f52SBarry Smith `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used 1570d382aafbSBarry Smith for memory copies on double precision values. 1571d382aafbSBarry Smith 157287497f52SBarry Smith Notes: 157387497f52SBarry Smith Prefer `PetscArraycpy()` 157487497f52SBarry Smith 157587497f52SBarry Smith This routine is analogous to `memcpy()`. 157687497f52SBarry Smith 15771fd49c25SBarry Smith Not available from Fortran 15781fd49c25SBarry Smith 157987497f52SBarry Smith Developer Note: 158087497f52SBarry Smith This is inlined for fastest performance 1581f5f57ec0SBarry Smith 1582db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1583d382aafbSBarry Smith @*/ 1584d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a, const void *b, size_t n) 1585d71ae5a4SJacob Faibussowitsch { 1586f3fa974cSJacob Faibussowitsch const PETSC_UINTPTR_T al = (PETSC_UINTPTR_T)a; 1587f3fa974cSJacob Faibussowitsch const PETSC_UINTPTR_T bl = (PETSC_UINTPTR_T)b; 1588f3fa974cSJacob Faibussowitsch 1589a7e36092SMatthew G Knepley PetscFunctionBegin; 1590f3fa974cSJacob Faibussowitsch if (PetscUnlikely((n == 0) || (a == b))) PetscFunctionReturn(0); 1591f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes to a null pointer (Argument #1)", n); 1592f3fa974cSJacob Faibussowitsch PetscAssert(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes from a null pointer (Argument #2)", n); 1593f3fa974cSJacob Faibussowitsch PetscAssert(!(((al > bl) && (al - bl) < n) || (bl - al) < n), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Memory regions overlap: either use PetscMemmove()\nor make sure your copy regions and lengths are correct.\nLength (bytes) %zu first address %" PRIxPTR " second address %" PRIxPTR, n, al, bl); 1594f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_DCOPY_FOR_MEMCPY) || PetscDefined(PREFER_COPY_FOR_MEMCPY) || PetscDefined(PREFER_FORTRAN_FORMEMCPY)) { 1595f3fa974cSJacob Faibussowitsch if (!(al % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1596f3fa974cSJacob Faibussowitsch const size_t scalar_len = n / sizeof(PetscScalar); 1597f3fa974cSJacob Faibussowitsch const PetscScalar *x = (PetscScalar *)b; 1598f3fa974cSJacob Faibussowitsch PetscScalar *y = (PetscScalar *)a; 1599f3fa974cSJacob Faibussowitsch 1600f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_DCOPY_FOR_MEMCPY) 1601f3fa974cSJacob Faibussowitsch { 1602f3fa974cSJacob Faibussowitsch const PetscBLASInt one = 1; 1603f3fa974cSJacob Faibussowitsch PetscBLASInt blen; 1604f3fa974cSJacob Faibussowitsch 1605f3fa974cSJacob Faibussowitsch PetscCall(PetscBLASIntCast(scalar_len, &blen)); 1606f3fa974cSJacob Faibussowitsch PetscCallBLAS("BLAScopy", BLAScopy_(&blen, x, &one, y, &one)); 16079a202e32SJacob Faibussowitsch } 1608f3fa974cSJacob Faibussowitsch #elif PetscDefined(PREFER_FORTRAN_FORMEMCPY) 1609f3fa974cSJacob Faibussowitsch fortrancopy_(&scalar_len, x, y); 1610a7e36092SMatthew G Knepley #else 1611f3fa974cSJacob Faibussowitsch for (size_t i = 0; i < scalar_len; i++) y[i] = x[i]; 1612a7e36092SMatthew G Knepley #endif 1613f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1614d382aafbSBarry Smith } 1615d382aafbSBarry Smith } 1616f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1617d382aafbSBarry Smith PetscFunctionReturn(0); 1618d382aafbSBarry Smith } 1619d382aafbSBarry Smith 1620d382aafbSBarry Smith /*@C 1621d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1622d382aafbSBarry Smith 1623d382aafbSBarry Smith Not Collective 1624d382aafbSBarry Smith 1625d382aafbSBarry Smith Input Parameters: 1626d382aafbSBarry Smith + a - pointer to beginning memory location 1627d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1628d382aafbSBarry Smith 1629d382aafbSBarry Smith Level: intermediate 1630d382aafbSBarry Smith 1631d382aafbSBarry Smith Compile Option: 163287497f52SBarry Smith `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens 1633d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1634d382aafbSBarry Smith 163587497f52SBarry Smith Notes: 16361fd49c25SBarry Smith Not available from Fortran 16371fd49c25SBarry Smith 163887497f52SBarry Smith Prefer `PetscArrayzero()` 163987497f52SBarry Smith 164087497f52SBarry Smith Developer Note: 164187497f52SBarry Smith This is inlined for fastest performance 1642503cfb0cSBarry Smith 1643db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1644d382aafbSBarry Smith @*/ 1645d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a, size_t n) 1646d71ae5a4SJacob Faibussowitsch { 1647f3fa974cSJacob Faibussowitsch PetscFunctionBegin; 1648f3fa974cSJacob Faibussowitsch if (PetscUnlikely(n == 0)) PetscFunctionReturn(0); 1649f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to zero %zu bytes at a null pointer", n); 1650f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_ZERO_FOR_MEMZERO) || PetscDefined(PREFER_FORTRAN_FOR_MEMZERO)) { 1651f3fa974cSJacob Faibussowitsch if (!(((PETSC_UINTPTR_T)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1652f3fa974cSJacob Faibussowitsch const size_t scalar_len = n / sizeof(PetscScalar); 1653d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)a; 1654f3fa974cSJacob Faibussowitsch 1655f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_ZERO_FOR_MEMZERO)) { 1656f3fa974cSJacob Faibussowitsch for (size_t i = 0; i < scalar_len; ++i) x[i] = 0; 1657d382aafbSBarry Smith } else { 1658f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_FORTRAN_FOR_MEMZERO) 1659f3fa974cSJacob Faibussowitsch fortranzero_(&scalar_len, x); 1660d382aafbSBarry Smith #else 1661f3fa974cSJacob Faibussowitsch (void)scalar_len; 1662f3fa974cSJacob Faibussowitsch (void)x; 1663d382aafbSBarry Smith #endif 1664d382aafbSBarry Smith } 1665f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1666f3fa974cSJacob Faibussowitsch } 1667f3fa974cSJacob Faibussowitsch } 1668f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_BZERO) 1669f3fa974cSJacob Faibussowitsch bzero(a, n); 1670f3fa974cSJacob Faibussowitsch #else 1671f3fa974cSJacob Faibussowitsch memset(a, 0, n); 1672f3fa974cSJacob Faibussowitsch #endif 1673f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1674d382aafbSBarry Smith } 1675d382aafbSBarry Smith 1676d382aafbSBarry Smith /*MC 1677580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1678580bdb30SBarry Smith 1679580bdb30SBarry Smith Synopsis: 1680580bdb30SBarry Smith #include <petscsys.h> 1681580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1682580bdb30SBarry Smith 1683580bdb30SBarry Smith Not Collective 1684580bdb30SBarry Smith 1685580bdb30SBarry Smith Input Parameters: 1686580bdb30SBarry Smith + str1 - First array 1687580bdb30SBarry Smith . str2 - Second array 1688580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1689580bdb30SBarry Smith 1690580bdb30SBarry Smith Output Parameters: 169187497f52SBarry Smith . e - `PETSC_TRUE` if equal else `PETSC_FALSE`. 1692580bdb30SBarry Smith 1693580bdb30SBarry Smith Level: intermediate 1694580bdb30SBarry Smith 169587497f52SBarry Smith Notes: 169687497f52SBarry Smith This routine is a preferred replacement to `PetscMemcmp()` 169787497f52SBarry Smith 1698580bdb30SBarry Smith The arrays must be of the same type 1699580bdb30SBarry Smith 1700db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1701db781477SPatrick Sanan `PetscArraymove()` 1702580bdb30SBarry Smith M*/ 1703f3fa974cSJacob Faibussowitsch #define PetscArraycmp(str1, str2, cnt, e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp((str1), (str2), (size_t)(cnt) * sizeof(*(str1)), (e))) 1704580bdb30SBarry Smith 17058f8f2f0dSBarry Smith /*MC 170687497f52SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays 1707580bdb30SBarry Smith do not overlap 1708580bdb30SBarry Smith 1709580bdb30SBarry Smith Synopsis: 1710580bdb30SBarry Smith #include <petscsys.h> 1711580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1712580bdb30SBarry Smith 1713580bdb30SBarry Smith Not Collective 1714580bdb30SBarry Smith 1715580bdb30SBarry Smith Input Parameters: 1716580bdb30SBarry Smith + str1 - First array 1717580bdb30SBarry Smith . str2 - Second array 1718580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1719580bdb30SBarry Smith 1720580bdb30SBarry Smith Level: intermediate 1721580bdb30SBarry Smith 172287497f52SBarry Smith Notes: 172387497f52SBarry Smith This routine is a preferred replacement to `PetscMemmove()` 172487497f52SBarry Smith 1725580bdb30SBarry Smith The arrays must be of the same type 1726580bdb30SBarry Smith 1727db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1728580bdb30SBarry Smith M*/ 1729f3fa974cSJacob Faibussowitsch #define PetscArraymove(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove((str1), (str2), (size_t)(cnt) * sizeof(*(str1)))) 1730580bdb30SBarry Smith 17318f8f2f0dSBarry Smith /*MC 1732580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1733580bdb30SBarry Smith 1734580bdb30SBarry Smith Synopsis: 1735580bdb30SBarry Smith #include <petscsys.h> 1736580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1737580bdb30SBarry Smith 1738580bdb30SBarry Smith Not Collective 1739580bdb30SBarry Smith 1740580bdb30SBarry Smith Input Parameters: 1741de25709eSStefano Zampini + str1 - First array (destination) 1742de25709eSStefano Zampini . str2 - Second array (source) 1743580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1744580bdb30SBarry Smith 1745580bdb30SBarry Smith Level: intermediate 1746580bdb30SBarry Smith 174787497f52SBarry Smith Notes: 174887497f52SBarry Smith This routine is a preferred replacement to `PetscMemcpy()` 174987497f52SBarry Smith 1750580bdb30SBarry Smith The arrays must be of the same type 1751580bdb30SBarry Smith 1752db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1753580bdb30SBarry Smith M*/ 1754f3fa974cSJacob Faibussowitsch #define PetscArraycpy(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy((str1), (str2), (size_t)(cnt) * sizeof(*(str1)))) 1755580bdb30SBarry Smith 17568f8f2f0dSBarry Smith /*MC 1757580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1758580bdb30SBarry Smith 1759580bdb30SBarry Smith Synopsis: 1760580bdb30SBarry Smith #include <petscsys.h> 1761580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1762580bdb30SBarry Smith 1763580bdb30SBarry Smith Not Collective 1764580bdb30SBarry Smith 1765580bdb30SBarry Smith Input Parameters: 1766580bdb30SBarry Smith + str1 - array 1767580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1768580bdb30SBarry Smith 1769580bdb30SBarry Smith Level: intermediate 1770580bdb30SBarry Smith 1771580bdb30SBarry Smith Note: 177287497f52SBarry Smith This routine is a preferred replacement to `PetscMemzero()` 1773580bdb30SBarry Smith 1774db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1775580bdb30SBarry Smith M*/ 1776f3fa974cSJacob Faibussowitsch #define PetscArrayzero(str1, cnt) PetscMemzero((str1), (size_t)(cnt) * sizeof(*(str1))) 1777580bdb30SBarry Smith 1778447bcd8fSJacob Faibussowitsch #if defined(PETSC_CLANG_STATIC_ANALYZER) 1779447bcd8fSJacob Faibussowitsch #define PetscPrefetchBlock(a, b, c, d) 1780447bcd8fSJacob Faibussowitsch #else 1781d382aafbSBarry Smith /*MC 1782d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1783d382aafbSBarry Smith 1784eca87e8dSBarry Smith Synopsis: 1785aaa7dc30SBarry Smith #include <petscsys.h> 1786eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1787eca87e8dSBarry Smith 1788d382aafbSBarry Smith Not Collective 1789d382aafbSBarry Smith 1790d382aafbSBarry Smith Input Parameters: 1791d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1792d382aafbSBarry Smith . n - number of elements to fetch 1793d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 179450d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1795d382aafbSBarry Smith 1796d382aafbSBarry Smith Level: developer 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Notes: 1799d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1800d382aafbSBarry Smith 180150d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 180250d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 180387497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 180487497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 180587497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 180687497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1807d382aafbSBarry Smith 1808d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1809d382aafbSBarry Smith address). 1810d382aafbSBarry Smith 1811d382aafbSBarry Smith M*/ 18129371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 18139371c9d4SSatish Balay do { \ 1814d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1815d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1816d382aafbSBarry Smith } while (0) 1817447bcd8fSJacob Faibussowitsch #endif 1818d382aafbSBarry Smith /* 1819d382aafbSBarry Smith Determine if some of the kernel computation routines use 1820d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1821d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1822d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1823e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1824d382aafbSBarry Smith */ 1825d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1826d382aafbSBarry Smith 1827d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1828d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1829d382aafbSBarry Smith #endif 1830d382aafbSBarry Smith 18315a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18325a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1833d382aafbSBarry Smith #endif 1834d382aafbSBarry Smith 1835d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1836d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1837d382aafbSBarry Smith #endif 1838d382aafbSBarry Smith 1839d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1840d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1841d382aafbSBarry Smith #endif 1842d382aafbSBarry Smith 1843d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1844d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1845d382aafbSBarry Smith #endif 1846d382aafbSBarry Smith 1847d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1848d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1849d382aafbSBarry Smith #endif 1850d382aafbSBarry Smith 1851d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1852d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1853d382aafbSBarry Smith #endif 1854d382aafbSBarry Smith 1855d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1856d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1857d382aafbSBarry Smith #endif 1858d382aafbSBarry Smith 1859d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1860d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1861d382aafbSBarry Smith #endif 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1864d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1865d382aafbSBarry Smith #endif 1866d382aafbSBarry Smith 1867d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1868d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1869d382aafbSBarry Smith #endif 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1872d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1873d382aafbSBarry Smith #endif 1874d382aafbSBarry Smith 1875d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1876d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1877d382aafbSBarry Smith #endif 1878d382aafbSBarry Smith 1879d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1880d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1881d382aafbSBarry Smith #endif 1882d382aafbSBarry Smith 1883d382aafbSBarry Smith #endif 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith /* 1886d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1887d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1888d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1889d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1890d382aafbSBarry Smith ugly extern "C" {} wrappers. 1891d382aafbSBarry Smith */ 1892d382aafbSBarry Smith #if defined(__cplusplus) 1893d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1894d382aafbSBarry Smith #define EXTERN_C_END } 1895d382aafbSBarry Smith #else 1896d382aafbSBarry Smith #define EXTERN_C_BEGIN 1897d382aafbSBarry Smith #define EXTERN_C_END 1898d382aafbSBarry Smith #endif 1899d382aafbSBarry Smith 1900d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith /*MC 1903d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1904d382aafbSBarry Smith communication 1905d382aafbSBarry Smith 1906d382aafbSBarry Smith Level: beginner 1907d382aafbSBarry Smith 1908d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1909d382aafbSBarry Smith 1910db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1911d382aafbSBarry Smith M*/ 1912d382aafbSBarry Smith 1913d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 191493d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 191593d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 191693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 191793d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 191893d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 191993d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1920d382aafbSBarry Smith #endif 1921d382aafbSBarry Smith 192261b0d812SBarry Smith /*@C 192387497f52SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an 192487497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1925c73702f5SBarry Smith 1926c73702f5SBarry Smith Not Collective 1927c73702f5SBarry Smith 1928c73702f5SBarry Smith Input Parameter: 192987497f52SBarry Smith . a - the `PetscInt64` value 1930c73702f5SBarry Smith 1931c73702f5SBarry Smith Output Parameter: 193287497f52SBarry Smith . b - the resulting `PetscInt` value 1933c73702f5SBarry Smith 1934c73702f5SBarry Smith Level: advanced 1935c73702f5SBarry Smith 193687497f52SBarry Smith Notes: 193787497f52SBarry Smith If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints 1938c73702f5SBarry Smith 1939c73702f5SBarry Smith Not available from Fortran 1940c73702f5SBarry Smith 1941db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1942c73702f5SBarry Smith @*/ 1943d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) 1944d71ae5a4SJacob Faibussowitsch { 1945c73702f5SBarry Smith PetscFunctionBegin; 19463ca90d2dSJacob Faibussowitsch *b = 0; 1947f3fa974cSJacob Faibussowitsch // if using 64-bit indices already then this comparison is tautologically true 1948f3fa974cSJacob Faibussowitsch PetscCheck(a < PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1949f3fa974cSJacob Faibussowitsch *b = (PetscInt)a; 1950c73702f5SBarry Smith PetscFunctionReturn(0); 1951c73702f5SBarry Smith } 1952c73702f5SBarry Smith 1953c73702f5SBarry Smith /*@C 195487497f52SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an 195587497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1956981bb840SJunchao Zhang 1957981bb840SJunchao Zhang Not Collective 1958981bb840SJunchao Zhang 1959981bb840SJunchao Zhang Input Parameter: 196087497f52SBarry Smith . a - the `PetscCount` value 1961981bb840SJunchao Zhang 1962981bb840SJunchao Zhang Output Parameter: 196387497f52SBarry Smith . b - the resulting `PetscInt` value 1964981bb840SJunchao Zhang 1965981bb840SJunchao Zhang Level: advanced 1966981bb840SJunchao Zhang 1967981bb840SJunchao Zhang Notes: 1968981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1969981bb840SJunchao Zhang 1970981bb840SJunchao Zhang Not available from Fortran 1971981bb840SJunchao Zhang 1972db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 1973981bb840SJunchao Zhang @*/ 1974d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) 1975d71ae5a4SJacob Faibussowitsch { 1976981bb840SJunchao Zhang PetscFunctionBegin; 1977981bb840SJunchao Zhang *b = 0; 1978f3fa974cSJacob Faibussowitsch PetscCheck(sizeof(PetscCount) <= sizeof(PetscInt) || a <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1979f3fa974cSJacob Faibussowitsch *b = (PetscInt)a; 1980981bb840SJunchao Zhang PetscFunctionReturn(0); 1981981bb840SJunchao Zhang } 1982981bb840SJunchao Zhang 1983981bb840SJunchao Zhang /*@C 198487497f52SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an 198587497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 198661b0d812SBarry Smith 198761b0d812SBarry Smith Not Collective 198861b0d812SBarry Smith 198961b0d812SBarry Smith Input Parameter: 199087497f52SBarry Smith . a - the `PetscInt` value 199161b0d812SBarry Smith 199261b0d812SBarry Smith Output Parameter: 199387497f52SBarry Smith . b - the resulting `PetscBLASInt` value 199461b0d812SBarry Smith 199561b0d812SBarry Smith Level: advanced 199661b0d812SBarry Smith 19970bc7d38cSBarry Smith Notes: 19981fd49c25SBarry Smith Not available from Fortran 199987497f52SBarry Smith 2000f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20011fd49c25SBarry Smith 2002db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 200361b0d812SBarry Smith @*/ 2004d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) 2005d71ae5a4SJacob Faibussowitsch { 2006c5df96a5SBarry Smith PetscFunctionBegin; 200754c59aa7SJacob Faibussowitsch *b = 0; 200854c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 200954c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 201054c59aa7SJacob Faibussowitsch } 201154c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 2012f3fa974cSJacob Faibussowitsch *b = (PetscBLASInt)a; 2013c5df96a5SBarry Smith PetscFunctionReturn(0); 2014c5df96a5SBarry Smith } 2015c5df96a5SBarry Smith 201661b0d812SBarry Smith /*@C 201787497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 2018eee0c0a6SToby Isaac 2019eee0c0a6SToby Isaac Not Collective 2020eee0c0a6SToby Isaac 2021eee0c0a6SToby Isaac Input Parameter: 202287497f52SBarry Smith . a - the `PetscInt` value 2023eee0c0a6SToby Isaac 2024eee0c0a6SToby Isaac Output Parameter: 202587497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 2026eee0c0a6SToby Isaac 2027eee0c0a6SToby Isaac Level: advanced 2028eee0c0a6SToby Isaac 2029eee0c0a6SToby Isaac Notes: 2030eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2031eee0c0a6SToby Isaac 2032db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2033eee0c0a6SToby Isaac @*/ 2034d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) 2035d71ae5a4SJacob Faibussowitsch { 2036eee0c0a6SToby Isaac PetscFunctionBegin; 203754c59aa7SJacob Faibussowitsch *b = 0; 2038f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.", a); 2039f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to cuBLAS routine", a); 2040f3fa974cSJacob Faibussowitsch *b = (PetscCuBLASInt)a; 2041eee0c0a6SToby Isaac PetscFunctionReturn(0); 2042eee0c0a6SToby Isaac } 2043eee0c0a6SToby Isaac 2044eee0c0a6SToby Isaac /*@C 204547d993e7Ssuyashtn PetscHipBLASIntCast - like `PetscBLASIntCast()`, but for `PetscHipBLASInt`. 204647d993e7Ssuyashtn 204747d993e7Ssuyashtn Not Collective 204847d993e7Ssuyashtn 204947d993e7Ssuyashtn Input Parameter: 205047d993e7Ssuyashtn . a - the `PetscInt` value 205147d993e7Ssuyashtn 205247d993e7Ssuyashtn Output Parameter: 205347d993e7Ssuyashtn . b - the resulting `PetscHipBLASInt` value 205447d993e7Ssuyashtn 205547d993e7Ssuyashtn Level: advanced 205647d993e7Ssuyashtn 205747d993e7Ssuyashtn Notes: 205847d993e7Ssuyashtn Errors if the integer is negative since PETSc calls to hipBLAS and friends never need to cast negative integer inputs 205947d993e7Ssuyashtn 206047d993e7Ssuyashtn .seealso: `PetscHipBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 206147d993e7Ssuyashtn @*/ 206247d993e7Ssuyashtn static inline PetscErrorCode PetscHipBLASIntCast(PetscInt a, PetscHipBLASInt *b) 206347d993e7Ssuyashtn { 206447d993e7Ssuyashtn PetscFunctionBegin; 206547d993e7Ssuyashtn *b = 0; 2066f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_HIPBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for hipBLAS, which is restricted to 32 bit integers.", a); 2067f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to hipBLAS routine", a); 2068f3fa974cSJacob Faibussowitsch *b = (PetscHipBLASInt)a; 206947d993e7Ssuyashtn PetscFunctionReturn(0); 207047d993e7Ssuyashtn } 207147d993e7Ssuyashtn 207247d993e7Ssuyashtn /*@C 207347d993e7Ssuyashtn PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 207447d993e7Ssuyashtn error if the PetscMPIInt is not large enough to hold the number. 207561b0d812SBarry Smith 207661b0d812SBarry Smith Not Collective 207761b0d812SBarry Smith 207861b0d812SBarry Smith Input Parameter: 207987497f52SBarry Smith . a - the `PetscInt` value 208061b0d812SBarry Smith 208161b0d812SBarry Smith Output Parameter: 208287497f52SBarry Smith . b - the resulting `PetscMPIInt` value 208361b0d812SBarry Smith 208461b0d812SBarry Smith Level: advanced 208561b0d812SBarry Smith 20861fd49c25SBarry Smith Not available from Fortran 20871fd49c25SBarry Smith 2088db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 208961b0d812SBarry Smith @*/ 2090d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) 2091d71ae5a4SJacob Faibussowitsch { 20924dc2109aSBarry Smith PetscFunctionBegin; 209354c59aa7SJacob Faibussowitsch *b = 0; 2094f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. Maximum supported value is %d", a, PETSC_MPI_INT_MAX); 2095f3fa974cSJacob Faibussowitsch *b = (PetscMPIInt)a; 20964dc2109aSBarry Smith PetscFunctionReturn(0); 20974dc2109aSBarry Smith } 20984dc2109aSBarry Smith 2099f3fa974cSJacob Faibussowitsch #define PetscInt64Mult(a, b) (((PetscInt64)(a)) * ((PetscInt64)(b))) 21002f18eb33SBarry Smith 21012f18eb33SBarry Smith /*@C 2102f3fa974cSJacob Faibussowitsch PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive 2103f3fa974cSJacob Faibussowitsch `PetscInt` and truncates the value to slightly less than the maximal possible value. 21042f18eb33SBarry Smith 2105f3fa974cSJacob Faibussowitsch Not Collective, Not available from Fortran 21062f18eb33SBarry Smith 2107d8d19677SJose E. Roman Input Parameters: 2108f3fa974cSJacob Faibussowitsch + a - The `PetscReal` value 2109f3fa974cSJacob Faibussowitsch - b - The `PetscInt` value 21102f18eb33SBarry Smith 2111f3fa974cSJacob Faibussowitsch Notes: 2112f3fa974cSJacob Faibussowitsch Returns the result as a `PetscInt` value. 21132f18eb33SBarry Smith 2114f3fa974cSJacob Faibussowitsch Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`. 2115f3fa974cSJacob Faibussowitsch Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate 2116f3fa974cSJacob Faibussowitsch to fit a `PetscInt`. 2117f3fa974cSJacob Faibussowitsch Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an 2118f3fa974cSJacob Faibussowitsch error if the result will not fit in a `PetscInt`. 21192f18eb33SBarry Smith 2120e28ce29aSPatrick Sanan Developers Note: 2121f3fa974cSJacob Faibussowitsch We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but 2122f3fa974cSJacob Faibussowitsch requires many more checks. 21232f18eb33SBarry Smith 2124f3fa974cSJacob Faibussowitsch This is used where we compute approximate sizes for workspace and need to insure the 2125f3fa974cSJacob Faibussowitsch workspace is index-able. 21261fd49c25SBarry Smith 21272f18eb33SBarry Smith Level: advanced 21282f18eb33SBarry Smith 2129f3fa974cSJacob Faibussowitsch .seealso: `PetscReal`, `PetscInt`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21302f18eb33SBarry Smith @*/ 2131d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) 2132d71ae5a4SJacob Faibussowitsch { 21335f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 21342f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21352f18eb33SBarry Smith return (PetscInt)r; 21362f18eb33SBarry Smith } 21372f18eb33SBarry Smith 21382f18eb33SBarry Smith /*@C 21392f18eb33SBarry Smith 214087497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21412f18eb33SBarry Smith 21422f18eb33SBarry Smith Not Collective 21432f18eb33SBarry Smith 2144d8d19677SJose E. Roman Input Parameters: 21452f18eb33SBarry Smith + a - the PetscInt value 21462f18eb33SBarry Smith - b - the second value 21472f18eb33SBarry Smith 2148390e1bf2SBarry Smith Returns: 214987497f52SBarry Smith the result as a `PetscInt` value 21502f18eb33SBarry Smith 215187497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 215287497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 215387497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21542f18eb33SBarry Smith 21551fd49c25SBarry Smith Not available from Fortran 21561fd49c25SBarry Smith 215787497f52SBarry Smith Developers Note: 215887497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21592f18eb33SBarry Smith 21602f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21612f18eb33SBarry Smith 21622f18eb33SBarry Smith Level: advanced 21632f18eb33SBarry Smith 2164db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21652f18eb33SBarry Smith @*/ 2166d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) 2167d71ae5a4SJacob Faibussowitsch { 21685f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 21692f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21702f18eb33SBarry Smith return (PetscInt)r; 21712f18eb33SBarry Smith } 21722f18eb33SBarry Smith 2173f91af8c7SBarry Smith /*@C 2174f91af8c7SBarry Smith 217587497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 2176f91af8c7SBarry Smith 2177f91af8c7SBarry Smith Not Collective 2178f91af8c7SBarry Smith 2179d8d19677SJose E. Roman Input Parameters: 218087497f52SBarry Smith + a - the `PetscInt` value 2181f91af8c7SBarry Smith - b - the second value 2182f91af8c7SBarry Smith 2183390e1bf2SBarry Smith Returns: 218487497f52SBarry Smith the result as a `PetscInt` value 2185f91af8c7SBarry Smith 218687497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 218787497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 218887497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 2189f91af8c7SBarry Smith 2190f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2191f91af8c7SBarry Smith 2192f5f57ec0SBarry Smith Not available from Fortran 2193f5f57ec0SBarry Smith 2194f91af8c7SBarry Smith Level: advanced 2195f91af8c7SBarry Smith 2196db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2197f91af8c7SBarry Smith @*/ 2198d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) 2199d71ae5a4SJacob Faibussowitsch { 22005f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2201f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2202f91af8c7SBarry Smith return (PetscInt)r; 2203f91af8c7SBarry Smith } 2204f91af8c7SBarry Smith 22052f18eb33SBarry Smith /*@C 22062f18eb33SBarry Smith 220787497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 22082f18eb33SBarry Smith 22092f18eb33SBarry Smith Not Collective 22102f18eb33SBarry Smith 2211d8d19677SJose E. Roman Input Parameters: 221287497f52SBarry Smith + a - the `PetscInt` value 22132f18eb33SBarry Smith - b - the second value 22142f18eb33SBarry Smith 2215d8d19677SJose E. Roman Output Parameter: 221687497f52SBarry Smith . result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 22172f18eb33SBarry Smith 221887497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 221987497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 22202f18eb33SBarry Smith 2221f5f57ec0SBarry Smith Not available from Fortran 2222f5f57ec0SBarry Smith 222387497f52SBarry Smith Developers Note: 222487497f52SBarry Smith We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 22252f18eb33SBarry Smith 22262f18eb33SBarry Smith Level: advanced 22272f18eb33SBarry Smith 2228db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22292f18eb33SBarry Smith @*/ 2230d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) 2231d71ae5a4SJacob Faibussowitsch { 2232f3fa974cSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 22332f18eb33SBarry Smith 22342f18eb33SBarry Smith PetscFunctionBegin; 2235f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 2236f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2237f3fa974cSJacob Faibussowitsch } 2238f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2239f91af8c7SBarry Smith PetscFunctionReturn(0); 2240f91af8c7SBarry Smith } 2241f91af8c7SBarry Smith 2242f91af8c7SBarry Smith /*@C 2243f91af8c7SBarry Smith 224487497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 2245f91af8c7SBarry Smith 2246f91af8c7SBarry Smith Not Collective 2247f91af8c7SBarry Smith 2248d8d19677SJose E. Roman Input Parameters: 224987497f52SBarry Smith + a - the `PetscInt` value 2250f91af8c7SBarry Smith - b - the second value 2251f91af8c7SBarry Smith 2252d8d19677SJose E. Roman Output Parameter: 225387497f52SBarry Smith . c - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 2254f91af8c7SBarry Smith 225587497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64` 225687497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 2257f91af8c7SBarry Smith 2258f5f57ec0SBarry Smith Not available from Fortran 2259f5f57ec0SBarry Smith 2260f91af8c7SBarry Smith Level: advanced 2261f91af8c7SBarry Smith 2262db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2263f91af8c7SBarry Smith @*/ 2264d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) 2265d71ae5a4SJacob Faibussowitsch { 2266f3fa974cSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2267f91af8c7SBarry Smith 2268f91af8c7SBarry Smith PetscFunctionBegin; 2269f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 2270f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2271f3fa974cSJacob Faibussowitsch } 2272f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 22732f18eb33SBarry Smith PetscFunctionReturn(0); 22742f18eb33SBarry Smith } 2275c5df96a5SBarry Smith 2276d382aafbSBarry Smith /* 22772981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2278d382aafbSBarry Smith */ 2279d382aafbSBarry Smith #if defined(hz) 2280d382aafbSBarry Smith #undef hz 2281d382aafbSBarry Smith #endif 2282d382aafbSBarry Smith 228315a5570dSLisandro Dalcin #include <limits.h> 228415a5570dSLisandro Dalcin 228515a5570dSLisandro Dalcin /* The number of bits in a byte */ 228615a5570dSLisandro Dalcin 228715a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 228815a5570dSLisandro Dalcin 2289d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2290d382aafbSBarry Smith #include <sys/types.h> 2291d382aafbSBarry Smith #endif 2292d382aafbSBarry Smith 2293d382aafbSBarry Smith /*MC 2294d382aafbSBarry Smith 229566d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 229666d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 229766d79e26SBarry Smith 22986274ba02SSatish Balay The current PETSc version and the API for accessing it are defined in <A HREF="PETSC_DOC_OUT_ROOT_PLACEHOLDER/include/petscversion.h.html">include/petscverson.html</A> 229966d79e26SBarry Smith 230066d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 230166d79e26SBarry Smith 230266d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 230366d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 230466d79e26SBarry Smith 230566d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 230666d79e26SBarry Smith 230766d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 230866d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 230966d79e26SBarry Smith version number (x.y.z). 231066d79e26SBarry Smith 231187497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 231266d79e26SBarry Smith 231387497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 231466d79e26SBarry Smith 231587497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 231666d79e26SBarry Smith 231787497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 231866d79e26SBarry Smith 231987497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 232066d79e26SBarry Smith 2321cbc12506SBarry Smith Level: intermediate 232266d79e26SBarry Smith 232366d79e26SBarry Smith M*/ 232466d79e26SBarry Smith 2325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 2326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 2327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 2328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 2329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 233127710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23325f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2333d382aafbSBarry Smith 23346a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 233562e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortedInt64(PetscInt, const PetscInt64[], PetscBool *); 23366a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 23376a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 233962e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortInt64(PetscInt, PetscInt64[]); 234062e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortCount(PetscInt, PetscCount[]); 2341ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 234222ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2343b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2345f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 234660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2347d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2351981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 23526c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2353981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 235417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 235517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 23575569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 235917df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 236139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2363745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 236439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 23686c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 23696c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2370e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2371ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2372ce605777SToby Isaac 23734d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2374676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2375676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2376676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 23774d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2378676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2379676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2380676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2381676f2a66SJacob Faibussowitsch 2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2384d382aafbSBarry Smith 238576bdecfbSBarry Smith /*J 2386d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2387d382aafbSBarry Smith 2388d382aafbSBarry Smith Level: beginner 2389d382aafbSBarry Smith 2390e28ce29aSPatrick Sanan Notes: 239187497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 239225ccb61fSToby Isaac with the option --download-sprng or --download-random123 2393d382aafbSBarry Smith 2394db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 239576bdecfbSBarry Smith J*/ 239619fd82e9SBarry Smith typedef const char *PetscRandomType; 2397d382aafbSBarry Smith #define PETSCRAND "rand" 2398d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2399d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2400c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 240125ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2402808ba619SStefano Zampini #define PETSCCURAND "curand" 2403d382aafbSBarry Smith 2404d382aafbSBarry Smith /* Logging support */ 2405014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2406d382aafbSBarry Smith 2407607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2408d382aafbSBarry Smith 2409d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2410140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2411d382aafbSBarry Smith 2412bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 241319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 241519fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2416fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2418d382aafbSBarry Smith 2419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2422808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2423808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2430d382aafbSBarry Smith 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 243897540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24398a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 244097540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2441d382aafbSBarry Smith 2442d71ae5a4SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) 2443d71ae5a4SJacob Faibussowitsch { 24449371c9d4SSatish Balay long _petsc_v = 1; 24459371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 24469371c9d4SSatish Balay } 244730815ce0SLisandro Dalcin 24489860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 24499860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2450f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2451f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2459c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2460e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2461c891a504SStefano Zampini #endif 2462d382aafbSBarry Smith 2463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2466d382aafbSBarry Smith 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24732a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2474d382aafbSBarry Smith 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 248093d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 248193d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 248293d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2483d382aafbSBarry Smith 24846145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 24856145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 24866145cd65SJed Brown 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2488d382aafbSBarry Smith 2489ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2490ce94432eSBarry Smith 2491d382aafbSBarry Smith struct _n_PetscSubcomm { 2492d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2493d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2494306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 249545487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 249645487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2497708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 249845487dadSJed Brown PetscSubcommType type; 2499e5acf8a4SHong Zhang char *subcommprefix; 2500d382aafbSBarry Smith }; 2501d382aafbSBarry Smith 2502d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) 2503d71ae5a4SJacob Faibussowitsch { 25049371c9d4SSatish Balay return scomm->parent; 25059371c9d4SSatish Balay } 2506d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) 2507d71ae5a4SJacob Faibussowitsch { 25089371c9d4SSatish Balay return scomm->child; 25099371c9d4SSatish Balay } 2510d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) 2511d71ae5a4SJacob Faibussowitsch { 25129371c9d4SSatish Balay return scomm->dupparent; 25139371c9d4SSatish Balay } 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 251865d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2519053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2520f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2521e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2522a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2523a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2524a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2525d382aafbSBarry Smith 25269962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 25279962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 25289962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 25299962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 25309962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 25319962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25329962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 25339962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 25349962606eSBarry Smith 25355e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25365f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 25375f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25385f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25395f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 25405e71baefSBarry Smith 2541a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2542a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2543a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2544a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2545a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2546a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2547a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2548a32e93adSJunchao Zhang 254913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 25500f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 255113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2552137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2553137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2554137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 255513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 255613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 25570f453b92SJed Brown 2558471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2559471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2560471ecdacSJed Brown * possible. */ 2561d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) 2562d71ae5a4SJacob Faibussowitsch { 25639371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 25649371c9d4SSatish Balay } 2565d382aafbSBarry Smith 25669de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25679de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 25689de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 25699de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 25709de0f6ecSBarry Smith 2571ace2fbaeSBarry Smith #include <stdarg.h> 2572ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2573ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2574ace2fbaeSBarry Smith 2575268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2576fbfcfee5SBarry Smith 25771f817a21SBarry Smith /*@C 25781f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25791f817a21SBarry Smith 258087497f52SBarry Smith Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed 25811f817a21SBarry Smith 25821f817a21SBarry Smith Input Parameters: 258335cb6cd3SPierre Jolivet + cite - the bibtex item, formatted to displayed on multiple lines nicely 258487497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 25851f817a21SBarry Smith 25863c7db156SBarry Smith Options Database: Key 25873c7db156SBarry Smith . -citations [filename] - print out the bibtex entries for the given computation 25883c7db156SBarry Smith 2589850545d0SSatish Balay Level: intermediate 2590850545d0SSatish Balay 25913c7db156SBarry Smith Fortran Note: 2592f5f57ec0SBarry Smith Not available from Fortran 2593f5f57ec0SBarry Smith 25941f817a21SBarry Smith @*/ 2595d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) 2596d71ae5a4SJacob Faibussowitsch { 2597dff31646SBarry Smith size_t len; 2598dff31646SBarry Smith char *vstring; 2599dff31646SBarry Smith 26001f817a21SBarry Smith PetscFunctionBegin; 26018d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 26029566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 26039566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 26049566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2605dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26061f817a21SBarry Smith PetscFunctionReturn(0); 2607dff31646SBarry Smith } 2608dff31646SBarry Smith 2609d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char[], char[], size_t c); 2610fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2611fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2612f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2613fe278a28SBarry Smith 2614f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2615f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 2616b967cddfSBarry Smith 26179f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 26189f4d3c52SBarry Smith 261904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm, const char[], const char[], PetscBool *); 2620763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm, const char[], const char[], PetscBool *); 2621dff31646SBarry Smith 262268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 26235dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2624d382aafbSBarry Smith 2625b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2626d71ae5a4SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2627d71ae5a4SJacob Faibussowitsch { 2628df05ca09SBarry Smith unsigned int c, hash = 5381; 2629df05ca09SBarry Smith 2630503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2631df05ca09SBarry Smith return hash; 2632df05ca09SBarry Smith } 263377a5e07dSBarry Smith 263477a5e07dSBarry Smith /*MC 263587497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 263687497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 263787497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 263877a5e07dSBarry Smith 2639d083f849SBarry Smith Collective 264077a5e07dSBarry Smith 264177a5e07dSBarry Smith Synopsis: 264277a5e07dSBarry Smith #include <petscsys.h> 264377a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 264477a5e07dSBarry Smith 264577a5e07dSBarry Smith Input Parameters: 2646df05ca09SBarry Smith + a - pointer to the input data to be reduced 2647df05ca09SBarry Smith . c - the number of MPI data items in a and b 264887497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 264987497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2650df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 265177a5e07dSBarry Smith 265277a5e07dSBarry Smith Output Parameter: 2653df05ca09SBarry Smith . b - the reduced values 265477a5e07dSBarry Smith 2655e28ce29aSPatrick Sanan Notes: 265687497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 265777a5e07dSBarry Smith 2658df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2659df05ca09SBarry Smith 266087497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2661df05ca09SBarry Smith 266277a5e07dSBarry Smith Level: developer 266377a5e07dSBarry Smith 2664db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 266577a5e07dSBarry Smith M*/ 26669371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 26679371c9d4SSatish Balay PetscMacroReturnStandard(PetscMPIInt a_b1[6], a_b2[6]; int _mpiu_allreduce_c_int = (int)c; a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)));) 2668b2566f29SBarry Smith #else 2669f3fa974cSJacob Faibussowitsch #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), (d), (e), (fcomm)))) 2670b2566f29SBarry Smith #endif 2671b2566f29SBarry Smith 2672b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26738198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 26748198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 26752f065d89SBarry Smith #endif 26768198064fSBarry Smith 2677cd88fca5SStefano Zampini /* this is a vile hack */ 2678cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 26799371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2680cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2681cd88fca5SStefano Zampini #endif 2682961fb248SStefano Zampini #endif 2683cd88fca5SStefano Zampini 268412801b39SBarry Smith /* 268560fbe2beSVaclav Hapla List of external packages and queries on it 268660fbe2beSVaclav Hapla */ 268760fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 268860fbe2beSVaclav Hapla 2689a52b435bSMark Adams /* 2690a52b435bSMark Adams OpenMP support 2691a52b435bSMark Adams */ 2692a52b435bSMark Adams #if defined(_OPENMP) 2693a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2694a52b435bSMark Adams #else // no OpenMP so no threads 2695a52b435bSMark Adams #define PetscPragmaOMP(...) 2696a52b435bSMark Adams #endif 2697a52b435bSMark Adams 2698f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2699f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2700f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2701f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 2702d382aafbSBarry Smith #endif 2703