1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1451393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1461393a3abSPatrick Sanan 1474e1ad211SJed Brown Typical usage is within normal code, 1484e1ad211SJed Brown 1494e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1504e1ad211SJed Brown 1514e1ad211SJed Brown but can also be used in the preprocessor, 1524e1ad211SJed Brown 1534e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1544e1ad211SJed Brown $ ... 1554e1ad211SJed Brown $ #else 1564e1ad211SJed Brown 1571393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1584e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1594e1ad211SJed Brown 1601393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1611393a3abSPatrick Sanan 1621393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1631393a3abSPatrick Sanan 1644e1ad211SJed Brown Developer Notes: 1654e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1664e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1674e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1684e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1694e1ad211SJed Brown 1704e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1714e1ad211SJed Brown implementation of variadic macros. 1724e1ad211SJed Brown 1734e1ad211SJed Brown Level: developer 1744e1ad211SJed Brown M*/ 1754e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1764e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1774e1ad211SJed Brown # define PetscDefined_arg_ shift, 1784e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1794e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1804e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1814e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1824e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1834e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1844e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1854e1ad211SJed Brown #endif 1864e1ad211SJed Brown 187d382aafbSBarry Smith /* 188a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 189a7886beaSBarry Smith This usually happens because 190a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 191a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 192a7886beaSBarry Smith */ 193a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 194c9b973beSBarry Smith # if !defined(MPIUNI_H) 195a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 196a7886beaSBarry Smith # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 20041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 20241f4af4cSSatish Balay # endif 20341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 20541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20841f4af4cSSatish Balay # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 21041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 211a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 212ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 213a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 214a7886beaSBarry Smith # endif 215a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 216a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 217a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 218ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 219c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 220a7886beaSBarry Smith # endif 221d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 222d97fd468SStefano Zampini # if !defined(MSMPI_VER) 223d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 224d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 225d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 226d97fd468SStefano Zampini # endif 227d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 228d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 229a7886beaSBarry Smith #endif 230a7886beaSBarry Smith 231a7886beaSBarry Smith /* 2322981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 233d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 234d382aafbSBarry Smith */ 235d382aafbSBarry Smith #include <stdio.h> 236d382aafbSBarry Smith 237d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 238d382aafbSBarry Smith #if !defined(MPIAPI) 239d382aafbSBarry Smith #define MPIAPI 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 2421cc8b206SBarry Smith /* 2431cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2441cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2451cc8b206SBarry Smith does not match the actual type of the argument being passed in 2461cc8b206SBarry Smith */ 247c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 248894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 252894dd566SJed Brown # endif 253894dd566SJed Brown #endif 254894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 255894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2568ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 258894dd566SJed Brown #endif 259b3506946SBarry Smith 2605a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 261df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan /*MC 264e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 265e28ce29aSPatrick Sanan 266e28ce29aSPatrick Sanan Notes: 267e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 268e28ce29aSPatrick Sanan 269e28ce29aSPatrick Sanan Level: beginner 270e28ce29aSPatrick Sanan 271e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 272e28ce29aSPatrick Sanan M*/ 273e28ce29aSPatrick Sanan 27437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 277fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 278bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 279a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 280f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 282a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 283236ed0a3SSatish Balay #else 284bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 285236ed0a3SSatish Balay #endif 286b7b8f77aSBarry Smith 2877cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 288b7b8f77aSBarry Smith 289d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 290bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 291a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 292d382aafbSBarry Smith #else 293d382aafbSBarry Smith # define MPIU_INT MPI_INT 294a05e1a72SSatish Balay # define PetscInt_FMT "d" 295d382aafbSBarry Smith #endif 296d382aafbSBarry Smith 297503cfb0cSBarry Smith /* 298503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 299503cfb0cSBarry Smith */ 300e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 304d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /* 309d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 310d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 311d382aafbSBarry Smith */ 312014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326e28ce29aSPatrick Sanan Notes: 327e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 328d382aafbSBarry Smith branch is unlikely. 329d382aafbSBarry Smith 330d382aafbSBarry Smith Level: advanced 331d382aafbSBarry Smith 332cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith 335d382aafbSBarry Smith /*MC 336d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 337d382aafbSBarry Smith 338d382aafbSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 34023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 341d382aafbSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameters: 345d382aafbSBarry Smith . cond - condition or expression 346d382aafbSBarry Smith 347e28ce29aSPatrick Sanan Notes: 348e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 349d382aafbSBarry Smith branch is likely. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: advanced 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscUnlikely() 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 356d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 357d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 358d382aafbSBarry Smith #else 359cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 360cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363cf9c20a2SJed Brown /*MC 364cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Synopsis: 367cf9c20a2SJed Brown #include <petscsys.h> 368cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 369cf9c20a2SJed Brown 370cf9c20a2SJed Brown Not Collective 371cf9c20a2SJed Brown 372cf9c20a2SJed Brown Input Parameters: 373cf9c20a2SJed Brown . cond - condition or expression 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown Notes: 376cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 377cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 378cf9c20a2SJed Brown 379cf9c20a2SJed Brown Level: advanced 380cf9c20a2SJed Brown 381cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 382cf9c20a2SJed Brown M*/ 383cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 384cf9c20a2SJed Brown 385c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 386c8b9133aSSatish Balay 387c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 3891dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 390c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 391160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 392c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 393160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 394160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 395c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 396c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 397c8b9133aSSatish Balay #else 398c8b9133aSSatish Balay # define PetscPragmaSIMD 399c8b9133aSSatish Balay #endif 400c8b9133aSSatish Balay 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith Declare extern C stuff after including external header files 403d382aafbSBarry Smith */ 404d382aafbSBarry Smith 4056a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 40670b3c8c7SBarry Smith 4078b49ba18SBarry Smith /* 408390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4098b49ba18SBarry Smith */ 4108b49ba18SBarry Smith #include <petscmath.h> 4118b49ba18SBarry Smith 4126a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 4150298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Note: 420e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 421d382aafbSBarry Smith some default 422d382aafbSBarry Smith 423e28ce29aSPatrick Sanan Fortran Notes: 424e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 425d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 4300298fd71SBarry Smith #define PETSC_IGNORE NULL 431d382aafbSBarry Smith 432c528d872SBarry Smith /* This is deprecated */ 433c528d872SBarry Smith #define PETSC_NULL NULL 434c528d872SBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Developer Note: 453e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 467e28ce29aSPatrick Sanan Fortran Notes: 468e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 469557d4da8SBarry Smith 4700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DEFAULT -2 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 477ea8fe74dSBarry Smith all the processes that PETSc knows about. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Notes: 482e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 483d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 484d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 485a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 486a990b902SBarry Smith 487a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 488a990b902SBarry Smith is called because it may not have a valid value yet. 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500e28ce29aSPatrick Sanan Notes: 501e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 502a990b902SBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 507d382aafbSBarry Smith 5086de5d289SStefano Zampini /*MC 5096de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5106de5d289SStefano Zampini MPI with MPI_Init_thread. 5116de5d289SStefano Zampini 5126de5d289SStefano Zampini Level: beginner 5136de5d289SStefano Zampini 5146de5d289SStefano Zampini Notes: 5156de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5166de5d289SStefano Zampini 5176de5d289SStefano Zampini .seealso: PetscInitialize() 5186de5d289SStefano Zampini 5196de5d289SStefano Zampini M*/ 5206de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5216de5d289SStefano Zampini 522d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5238ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 524014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 525014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5264cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 527d382aafbSBarry Smith 528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 531d382aafbSBarry Smith 5327381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 53305035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 534cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5353c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5367381773fSBarry Smith #endif 5377381773fSBarry Smith 53805035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53905035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 54005035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5413c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 54205035670SJunchao Zhang #endif 54305035670SJunchao Zhang 54459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 54559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 54659e55d94SJunchao Zhang #endif 54759e55d94SJunchao Zhang 548540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 549540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 550540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 551540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 552540e20f2SPierre Jolivet #endif 553540e20f2SPierre Jolivet 554d382aafbSBarry Smith /*MC 55595dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 556d382aafbSBarry Smith 557eca87e8dSBarry Smith Synopsis: 558aaa7dc30SBarry Smith #include <petscsys.h> 559eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 560eca87e8dSBarry Smith 561eca87e8dSBarry Smith Not Collective 562eca87e8dSBarry Smith 563d382aafbSBarry Smith Input Parameter: 564d382aafbSBarry Smith . m - number of bytes to allocate 565d382aafbSBarry Smith 566d382aafbSBarry Smith Output Parameter: 567d382aafbSBarry Smith . result - memory allocated 568d382aafbSBarry Smith 569d382aafbSBarry Smith Level: beginner 570d382aafbSBarry Smith 57149d7da52SJed Brown Notes: 57249d7da52SJed Brown Memory is always allocated at least double aligned 573d382aafbSBarry Smith 57449d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 575d382aafbSBarry Smith 576d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 577d382aafbSBarry Smith 578d382aafbSBarry Smith M*/ 579071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 580d382aafbSBarry Smith 581d382aafbSBarry Smith /*MC 5823221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5833221ece2SMatthew G. Knepley 5843221ece2SMatthew G. Knepley Synopsis: 5853221ece2SMatthew G. Knepley #include <petscsys.h> 5863221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5873221ece2SMatthew G. Knepley 5883221ece2SMatthew G. Knepley Not Collective 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley Input Parameters: 5913221ece2SMatthew G. Knepley + m - number of bytes to allocate 59292f119d6SBarry Smith - result - previous memory 5933221ece2SMatthew G. Knepley 5943221ece2SMatthew G. Knepley Output Parameter: 5953221ece2SMatthew G. Knepley . result - new memory allocated 5963221ece2SMatthew G. Knepley 5973221ece2SMatthew G. Knepley Level: developer 5983221ece2SMatthew G. Knepley 5993221ece2SMatthew G. Knepley Notes: 6003221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6013221ece2SMatthew G. Knepley 6023221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6033221ece2SMatthew G. Knepley 6043221ece2SMatthew G. Knepley M*/ 6053221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6063221ece2SMatthew G. Knepley 6073221ece2SMatthew G. Knepley /*MC 608503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 609d382aafbSBarry Smith 610d382aafbSBarry Smith Synopsis: 611aaa7dc30SBarry Smith #include <petscsys.h> 612d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 613d382aafbSBarry Smith 614eca87e8dSBarry Smith Not Collective 615eca87e8dSBarry Smith 616eca87e8dSBarry Smith Input Parameters: 617eca87e8dSBarry Smith . addr - address to align (any pointer type) 618eca87e8dSBarry Smith 619d382aafbSBarry Smith Level: developer 620d382aafbSBarry Smith 621d382aafbSBarry Smith .seealso: PetscMallocAlign() 622d382aafbSBarry Smith 623d382aafbSBarry Smith M*/ 624d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 625d382aafbSBarry Smith 626d382aafbSBarry Smith /*MC 627785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 628d382aafbSBarry Smith 629eca87e8dSBarry Smith Synopsis: 630aaa7dc30SBarry Smith #include <petscsys.h> 631785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 632785e854fSJed Brown 633785e854fSJed Brown Not Collective 634785e854fSJed Brown 635785e854fSJed Brown Input Parameter: 636390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 637785e854fSJed Brown 638785e854fSJed Brown Output Parameter: 6391fe1b817SJunchao Zhang . r1 - memory allocated 640785e854fSJed Brown 641e28ce29aSPatrick Sanan Note: 642e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 643390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 644390e1bf2SBarry Smith $ PetscInt *id; 645390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 646390e1bf2SBarry Smith not 647390e1bf2SBarry Smith $ PetscInt *id; 648390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 649390e1bf2SBarry Smith 6501fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 651390e1bf2SBarry Smith 652390e1bf2SBarry Smith Level: beginner 653785e854fSJed Brown 6541795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 655785e854fSJed Brown 656785e854fSJed Brown M*/ 6572553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 658785e854fSJed Brown 659785e854fSJed Brown /*MC 6601795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6611795a4d1SJed Brown 6621795a4d1SJed Brown Synopsis: 663aaa7dc30SBarry Smith #include <petscsys.h> 6641795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6651795a4d1SJed Brown 6661795a4d1SJed Brown Not Collective 6671795a4d1SJed Brown 6681795a4d1SJed Brown Input Parameter: 6691795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6701795a4d1SJed Brown 6711795a4d1SJed Brown Output Parameter: 6721fe1b817SJunchao Zhang . r1 - memory allocated 6731795a4d1SJed Brown 674e28ce29aSPatrick Sanan Notes: 675e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 676390e1bf2SBarry Smith 677390e1bf2SBarry Smith Level: beginner 6781795a4d1SJed Brown 6791795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6801795a4d1SJed Brown 6811795a4d1SJed Brown M*/ 6822553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6831795a4d1SJed Brown 6841795a4d1SJed Brown /*MC 685dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 686d382aafbSBarry Smith 687eca87e8dSBarry Smith Synopsis: 688aaa7dc30SBarry Smith #include <petscsys.h> 689dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 690eca87e8dSBarry Smith 691eca87e8dSBarry Smith Not Collective 692eca87e8dSBarry Smith 693d382aafbSBarry Smith Input Parameter: 694d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 695dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 696d382aafbSBarry Smith 697d382aafbSBarry Smith Output Parameter: 698d382aafbSBarry Smith + r1 - memory allocated in first chunk 699d382aafbSBarry Smith - r2 - memory allocated in second chunk 700d382aafbSBarry Smith 701d382aafbSBarry Smith Level: developer 702d382aafbSBarry Smith 7031795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 704d382aafbSBarry Smith 705d382aafbSBarry Smith M*/ 7062553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 707d382aafbSBarry Smith 708d382aafbSBarry Smith /*MC 7091795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 710d382aafbSBarry Smith 711eca87e8dSBarry Smith Synopsis: 712aaa7dc30SBarry Smith #include <petscsys.h> 7131795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 714eca87e8dSBarry Smith 715eca87e8dSBarry Smith Not Collective 716eca87e8dSBarry Smith 717d382aafbSBarry Smith Input Parameter: 718d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7191795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7201795a4d1SJed Brown 7211795a4d1SJed Brown Output Parameter: 7221795a4d1SJed Brown + r1 - memory allocated in first chunk 7231795a4d1SJed Brown - r2 - memory allocated in second chunk 7241795a4d1SJed Brown 7251795a4d1SJed Brown Level: developer 7261795a4d1SJed Brown 7271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7281795a4d1SJed Brown 7291795a4d1SJed Brown M*/ 7302553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7311795a4d1SJed Brown 7321795a4d1SJed Brown /*MC 733dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 734d382aafbSBarry Smith 735d382aafbSBarry Smith Synopsis: 736aaa7dc30SBarry Smith #include <petscsys.h> 737dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 738d382aafbSBarry Smith 739d382aafbSBarry Smith Not Collective 740d382aafbSBarry Smith 741d382aafbSBarry Smith Input Parameter: 742d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 743d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 744dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 745d382aafbSBarry Smith 746d382aafbSBarry Smith Output Parameter: 747d382aafbSBarry Smith + r1 - memory allocated in first chunk 748d382aafbSBarry Smith . r2 - memory allocated in second chunk 749d382aafbSBarry Smith - r3 - memory allocated in third chunk 750d382aafbSBarry Smith 751d382aafbSBarry Smith Level: developer 752d382aafbSBarry Smith 7531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 754d382aafbSBarry Smith 755d382aafbSBarry Smith M*/ 7562553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 757d382aafbSBarry Smith 758d382aafbSBarry Smith /*MC 7591795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 760d382aafbSBarry Smith 761eca87e8dSBarry Smith Synopsis: 762aaa7dc30SBarry Smith #include <petscsys.h> 7631795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 764eca87e8dSBarry Smith 765eca87e8dSBarry Smith Not Collective 766eca87e8dSBarry Smith 767d382aafbSBarry Smith Input Parameter: 768d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 769d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7701795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7711795a4d1SJed Brown 7721795a4d1SJed Brown Output Parameter: 7731795a4d1SJed Brown + r1 - memory allocated in first chunk 7741795a4d1SJed Brown . r2 - memory allocated in second chunk 7751795a4d1SJed Brown - r3 - memory allocated in third chunk 7761795a4d1SJed Brown 7771795a4d1SJed Brown Level: developer 7781795a4d1SJed Brown 7791795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7801795a4d1SJed Brown 7811795a4d1SJed Brown M*/ 7822553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7831795a4d1SJed Brown 7841795a4d1SJed Brown /*MC 785dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 786d382aafbSBarry Smith 787d382aafbSBarry Smith Synopsis: 788aaa7dc30SBarry Smith #include <petscsys.h> 789dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 790d382aafbSBarry Smith 791d382aafbSBarry Smith Not Collective 792d382aafbSBarry Smith 793d382aafbSBarry Smith Input Parameter: 794d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 795d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 796d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 797dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 798d382aafbSBarry Smith 799d382aafbSBarry Smith Output Parameter: 800d382aafbSBarry Smith + r1 - memory allocated in first chunk 801d382aafbSBarry Smith . r2 - memory allocated in second chunk 802d382aafbSBarry Smith . r3 - memory allocated in third chunk 803d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 804d382aafbSBarry Smith 805d382aafbSBarry Smith Level: developer 806d382aafbSBarry Smith 8071795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 808d382aafbSBarry Smith 809d382aafbSBarry Smith M*/ 8102553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 811d382aafbSBarry Smith 812d382aafbSBarry Smith /*MC 8131795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 814d382aafbSBarry Smith 815eca87e8dSBarry Smith Synopsis: 816aaa7dc30SBarry Smith #include <petscsys.h> 8171795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 818eca87e8dSBarry Smith 819eca87e8dSBarry Smith Not Collective 820eca87e8dSBarry Smith 821e28ce29aSPatrick Sanan Input Parameters: 822d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 823d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 824d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8251795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8261795a4d1SJed Brown 827e28ce29aSPatrick Sanan Output Parameters: 8281795a4d1SJed Brown + r1 - memory allocated in first chunk 8291795a4d1SJed Brown . r2 - memory allocated in second chunk 8301795a4d1SJed Brown . r3 - memory allocated in third chunk 8311795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8321795a4d1SJed Brown 8331795a4d1SJed Brown Level: developer 8341795a4d1SJed Brown 8351795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8361795a4d1SJed Brown 8371795a4d1SJed Brown M*/ 8382553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8391795a4d1SJed Brown 8401795a4d1SJed Brown /*MC 841dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 842d382aafbSBarry Smith 843d382aafbSBarry Smith Synopsis: 844aaa7dc30SBarry Smith #include <petscsys.h> 845dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 846d382aafbSBarry Smith 847d382aafbSBarry Smith Not Collective 848d382aafbSBarry Smith 849e28ce29aSPatrick Sanan Input Parameters: 850d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 851d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 852d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 853d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 854dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 855d382aafbSBarry Smith 856e28ce29aSPatrick Sanan Output Parameters: 857d382aafbSBarry Smith + r1 - memory allocated in first chunk 858d382aafbSBarry Smith . r2 - memory allocated in second chunk 859d382aafbSBarry Smith . r3 - memory allocated in third chunk 860d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 861d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 862d382aafbSBarry Smith 863d382aafbSBarry Smith Level: developer 864d382aafbSBarry Smith 8651795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 866d382aafbSBarry Smith 867d382aafbSBarry Smith M*/ 8682553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 869d382aafbSBarry Smith 870d382aafbSBarry Smith /*MC 8711795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 872d382aafbSBarry Smith 873eca87e8dSBarry Smith Synopsis: 874aaa7dc30SBarry Smith #include <petscsys.h> 8751795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 876eca87e8dSBarry Smith 877eca87e8dSBarry Smith Not Collective 878eca87e8dSBarry Smith 879e28ce29aSPatrick Sanan Input Parameters: 880d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 881d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 882d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 883d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8841795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8851795a4d1SJed Brown 886e28ce29aSPatrick Sanan Output Parameters: 8871795a4d1SJed Brown + r1 - memory allocated in first chunk 8881795a4d1SJed Brown . r2 - memory allocated in second chunk 8891795a4d1SJed Brown . r3 - memory allocated in third chunk 8901795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8911795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8921795a4d1SJed Brown 8931795a4d1SJed Brown Level: developer 8941795a4d1SJed Brown 8951795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8961795a4d1SJed Brown 8971795a4d1SJed Brown M*/ 8982553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 899d382aafbSBarry Smith 900d382aafbSBarry Smith /*MC 901dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 902d382aafbSBarry Smith 903d382aafbSBarry Smith Synopsis: 904aaa7dc30SBarry Smith #include <petscsys.h> 905dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 906d382aafbSBarry Smith 907d382aafbSBarry Smith Not Collective 908d382aafbSBarry Smith 909e28ce29aSPatrick Sanan Input Parameters: 910d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 911d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 912d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 913d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 914d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 915dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 916d382aafbSBarry Smith 917e28ce29aSPatrick Sanan Output Parameteasr: 918d382aafbSBarry Smith + r1 - memory allocated in first chunk 919d382aafbSBarry Smith . r2 - memory allocated in second chunk 920d382aafbSBarry Smith . r3 - memory allocated in third chunk 921d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 922d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 923d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 924d382aafbSBarry Smith 925d382aafbSBarry Smith Level: developer 926d382aafbSBarry Smith 9271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 928d382aafbSBarry Smith 929d382aafbSBarry Smith M*/ 9302553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 931d382aafbSBarry Smith 932d382aafbSBarry Smith /*MC 9331795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 934d382aafbSBarry Smith 935eca87e8dSBarry Smith Synopsis: 936aaa7dc30SBarry Smith #include <petscsys.h> 9371795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 938eca87e8dSBarry Smith 939eca87e8dSBarry Smith Not Collective 940eca87e8dSBarry Smith 941e28ce29aSPatrick Sanan Input Parameters: 942d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 943d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 944d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 945d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 946d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9471795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9481795a4d1SJed Brown 949e28ce29aSPatrick Sanan Output Parameters: 9501795a4d1SJed Brown + r1 - memory allocated in first chunk 9511795a4d1SJed Brown . r2 - memory allocated in second chunk 9521795a4d1SJed Brown . r3 - memory allocated in third chunk 9531795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9541795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9551795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9561795a4d1SJed Brown 9571795a4d1SJed Brown Level: developer 9581795a4d1SJed Brown 9591795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9601795a4d1SJed Brown 9611795a4d1SJed Brown M*/ 9622553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9631795a4d1SJed Brown 9641795a4d1SJed Brown /*MC 965dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 966d382aafbSBarry Smith 967d382aafbSBarry Smith Synopsis: 968aaa7dc30SBarry Smith #include <petscsys.h> 969dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 970d382aafbSBarry Smith 971d382aafbSBarry Smith Not Collective 972d382aafbSBarry Smith 973e28ce29aSPatrick Sanan Input Parameters: 974d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 975d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 976d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 977d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 978d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 979d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 980dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 981d382aafbSBarry Smith 982e28ce29aSPatrick Sanan Output Parameters: 983d382aafbSBarry Smith + r1 - memory allocated in first chunk 984d382aafbSBarry Smith . r2 - memory allocated in second chunk 985d382aafbSBarry Smith . r3 - memory allocated in third chunk 986d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 987d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 988d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 989eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 990d382aafbSBarry Smith 991d382aafbSBarry Smith Level: developer 992d382aafbSBarry Smith 9931795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 994d382aafbSBarry Smith 995d382aafbSBarry Smith M*/ 9962553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 997d382aafbSBarry Smith 998d382aafbSBarry Smith /*MC 9991795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10001795a4d1SJed Brown 10011795a4d1SJed Brown Synopsis: 1002aaa7dc30SBarry Smith #include <petscsys.h> 10031795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10041795a4d1SJed Brown 10051795a4d1SJed Brown Not Collective 10061795a4d1SJed Brown 1007e28ce29aSPatrick Sanan Input Parameters: 10081795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10091795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10101795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10111795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10121795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10131795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10141795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10151795a4d1SJed Brown 1016e28ce29aSPatrick Sanan Output Parameters: 10171795a4d1SJed Brown + r1 - memory allocated in first chunk 10181795a4d1SJed Brown . r2 - memory allocated in second chunk 10191795a4d1SJed Brown . r3 - memory allocated in third chunk 10201795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10211795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10221795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10231795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10241795a4d1SJed Brown 10251795a4d1SJed Brown Level: developer 10261795a4d1SJed Brown 10271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10281795a4d1SJed Brown 10291795a4d1SJed Brown M*/ 10302553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10311795a4d1SJed Brown 10321795a4d1SJed Brown /*MC 1033503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1034d382aafbSBarry Smith 1035eca87e8dSBarry Smith Synopsis: 1036aaa7dc30SBarry Smith #include <petscsys.h> 1037b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1038eca87e8dSBarry Smith 1039eca87e8dSBarry Smith Not Collective 1040eca87e8dSBarry Smith 1041d382aafbSBarry Smith Output Parameter: 1042b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1043d382aafbSBarry Smith 1044d382aafbSBarry Smith Level: beginner 1045d382aafbSBarry Smith 1046390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith M*/ 1049b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1050ad0619ddSBarry Smith 1051ad0619ddSBarry Smith /*MC 1052b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1053ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1054ad0619ddSBarry Smith 1055ad0619ddSBarry Smith Synopsis: 1056aaa7dc30SBarry Smith #include <petscsys.h> 1057b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1058ad0619ddSBarry Smith 1059ad0619ddSBarry Smith Not Collective 1060ad0619ddSBarry Smith 1061ad0619ddSBarry Smith Input Parameter: 1062b00a9115SJed Brown . obj - object memory is logged to 1063ad0619ddSBarry Smith 1064ad0619ddSBarry Smith Output Parameter: 1065b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1066ad0619ddSBarry Smith 1067ad0619ddSBarry Smith Level: developer 1068ad0619ddSBarry Smith 1069390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1070ad0619ddSBarry Smith 1071ad0619ddSBarry Smith M*/ 1072d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith /*MC 1075d382aafbSBarry Smith PetscFree - Frees memory 1076d382aafbSBarry Smith 1077eca87e8dSBarry Smith Synopsis: 1078aaa7dc30SBarry Smith #include <petscsys.h> 1079eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1080eca87e8dSBarry Smith 1081eca87e8dSBarry Smith Not Collective 1082eca87e8dSBarry Smith 1083d382aafbSBarry Smith Input Parameter: 10847f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1085d382aafbSBarry Smith 1086d382aafbSBarry Smith Level: beginner 1087d382aafbSBarry Smith 108849d7da52SJed Brown Notes: 1089390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1090390e1bf2SBarry Smith 109149d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1092d382aafbSBarry Smith 1093390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith M*/ 1096ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith /*MC 1099d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1100d382aafbSBarry Smith 1101eca87e8dSBarry Smith Synopsis: 1102aaa7dc30SBarry Smith #include <petscsys.h> 1103eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1104eca87e8dSBarry Smith 1105eca87e8dSBarry Smith Not Collective 1106eca87e8dSBarry Smith 1107e28ce29aSPatrick Sanan Input Parameters: 1108d382aafbSBarry Smith + memory1 - memory to free 1109d382aafbSBarry Smith - memory2 - 2nd memory to free 1110d382aafbSBarry Smith 1111d382aafbSBarry Smith Level: developer 1112d382aafbSBarry Smith 111395452b02SPatrick Sanan Notes: 111495452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1115d382aafbSBarry Smith 1116d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1117d382aafbSBarry Smith 1118d382aafbSBarry Smith M*/ 1119ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1120d382aafbSBarry Smith 1121d382aafbSBarry Smith /*MC 1122d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1123d382aafbSBarry Smith 1124eca87e8dSBarry Smith Synopsis: 1125aaa7dc30SBarry Smith #include <petscsys.h> 1126eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1127eca87e8dSBarry Smith 1128eca87e8dSBarry Smith Not Collective 1129eca87e8dSBarry Smith 1130e28ce29aSPatrick Sanan Input Parameters: 1131d382aafbSBarry Smith + memory1 - memory to free 1132d382aafbSBarry Smith . memory2 - 2nd memory to free 1133d382aafbSBarry Smith - memory3 - 3rd memory to free 1134d382aafbSBarry Smith 1135d382aafbSBarry Smith Level: developer 1136d382aafbSBarry Smith 113795452b02SPatrick Sanan Notes: 113895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1139d382aafbSBarry Smith 1140d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1141d382aafbSBarry Smith 1142d382aafbSBarry Smith M*/ 1143ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1144d382aafbSBarry Smith 1145d382aafbSBarry Smith /*MC 1146d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1147d382aafbSBarry Smith 1148eca87e8dSBarry Smith Synopsis: 1149aaa7dc30SBarry Smith #include <petscsys.h> 1150eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1151eca87e8dSBarry Smith 1152eca87e8dSBarry Smith Not Collective 1153eca87e8dSBarry Smith 1154e28ce29aSPatrick Sanan Input Parameters: 1155d382aafbSBarry Smith + m1 - memory to free 1156d382aafbSBarry Smith . m2 - 2nd memory to free 1157d382aafbSBarry Smith . m3 - 3rd memory to free 1158d382aafbSBarry Smith - m4 - 4th memory to free 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith Level: developer 1161d382aafbSBarry Smith 116295452b02SPatrick Sanan Notes: 116395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1164d382aafbSBarry Smith 1165d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith M*/ 1168ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1169d382aafbSBarry Smith 1170d382aafbSBarry Smith /*MC 1171d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1172d382aafbSBarry Smith 1173eca87e8dSBarry Smith Synopsis: 1174aaa7dc30SBarry Smith #include <petscsys.h> 1175eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1176eca87e8dSBarry Smith 1177eca87e8dSBarry Smith Not Collective 1178eca87e8dSBarry Smith 1179e28ce29aSPatrick Sanan Input Parameters: 1180d382aafbSBarry Smith + m1 - memory to free 1181d382aafbSBarry Smith . m2 - 2nd memory to free 1182d382aafbSBarry Smith . m3 - 3rd memory to free 1183d382aafbSBarry Smith . m4 - 4th memory to free 1184d382aafbSBarry Smith - m5 - 5th memory to free 1185d382aafbSBarry Smith 1186d382aafbSBarry Smith Level: developer 1187d382aafbSBarry Smith 118895452b02SPatrick Sanan Notes: 118995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1190d382aafbSBarry Smith 1191d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1192d382aafbSBarry Smith 1193d382aafbSBarry Smith M*/ 1194ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1195d382aafbSBarry Smith 1196d382aafbSBarry Smith /*MC 1197d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1198d382aafbSBarry Smith 1199eca87e8dSBarry Smith Synopsis: 1200aaa7dc30SBarry Smith #include <petscsys.h> 1201eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1202eca87e8dSBarry Smith 1203eca87e8dSBarry Smith Not Collective 1204eca87e8dSBarry Smith 1205e28ce29aSPatrick Sanan Input Parameters: 1206d382aafbSBarry Smith + m1 - memory to free 1207d382aafbSBarry Smith . m2 - 2nd memory to free 1208d382aafbSBarry Smith . m3 - 3rd memory to free 1209d382aafbSBarry Smith . m4 - 4th memory to free 1210d382aafbSBarry Smith . m5 - 5th memory to free 1211d382aafbSBarry Smith - m6 - 6th memory to free 1212d382aafbSBarry Smith 1213d382aafbSBarry Smith 1214d382aafbSBarry Smith Level: developer 1215d382aafbSBarry Smith 121695452b02SPatrick Sanan Notes: 121795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1220d382aafbSBarry Smith 1221d382aafbSBarry Smith M*/ 1222ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith /*MC 1225d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1226d382aafbSBarry Smith 1227eca87e8dSBarry Smith Synopsis: 1228aaa7dc30SBarry Smith #include <petscsys.h> 1229eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1230eca87e8dSBarry Smith 1231eca87e8dSBarry Smith Not Collective 1232eca87e8dSBarry Smith 1233e28ce29aSPatrick Sanan Input Parameters: 1234d382aafbSBarry Smith + m1 - memory to free 1235d382aafbSBarry Smith . m2 - 2nd memory to free 1236d382aafbSBarry Smith . m3 - 3rd memory to free 1237d382aafbSBarry Smith . m4 - 4th memory to free 1238d382aafbSBarry Smith . m5 - 5th memory to free 1239d382aafbSBarry Smith . m6 - 6th memory to free 1240d382aafbSBarry Smith - m7 - 7th memory to free 1241d382aafbSBarry Smith 1242d382aafbSBarry Smith 1243d382aafbSBarry Smith Level: developer 1244d382aafbSBarry Smith 124595452b02SPatrick Sanan Notes: 124695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1247d382aafbSBarry Smith 1248d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1249d382aafbSBarry Smith PetscMalloc7() 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith M*/ 1252ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1253d382aafbSBarry Smith 1254ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1255ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1256071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1257efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12583221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1259ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 126092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1262d382aafbSBarry Smith 1263d382aafbSBarry Smith /* 1264c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1265c1706be6SHong Zhang */ 1266c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1267c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 126831f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 126931f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 127031f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 127131f06eaaSHong Zhang #endif 127259af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 127359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 127459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 127559af0bd3SScott Kruger #endif 127659af0bd3SScott Kruger 1277c1706be6SHong Zhang 1278a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 127936763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1280a5057860SBarry Smith 1281a5057860SBarry Smith /* 128266d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1283d382aafbSBarry Smith */ 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 128592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1288e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1289e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 129092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 129192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1292efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 129392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 129492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1295608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1296608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1297d382aafbSBarry Smith 12986a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13028e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1303d382aafbSBarry Smith 1304d382aafbSBarry Smith /* 1305d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1306d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1307d382aafbSBarry Smith functionality and/or error checking. 1308d382aafbSBarry Smith */ 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1311d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1319a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13232f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13282c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 133147340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13326fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13336991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13346991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1336d382aafbSBarry Smith 1337573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1338573b0fb4SBarry Smith 1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1342d382aafbSBarry Smith 1343e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1344a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1345a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1346a53986e1SJed Brown 1347d382aafbSBarry Smith /* 1348d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1349d382aafbSBarry Smith */ 1350367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1351570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1352*de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1353014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1354014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1355d9822059SBarry Smith #else 1356*de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1357d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1358d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1359d9822059SBarry Smith #endif 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1361d382aafbSBarry Smith 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1364eb3f98d2SBarry Smith 136595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1366d6a4318aSJed Brown 1367639ff905SBarry Smith /* 1368639ff905SBarry Smith Defines PETSc error handling. 1369639ff905SBarry Smith */ 1370639ff905SBarry Smith #include <petscerror.h> 1371d382aafbSBarry Smith 13720700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1373014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1374014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 137681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 137781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 137881256985SMatthew G. Knepley 1379d382aafbSBarry Smith 1380d382aafbSBarry Smith /* 1381d382aafbSBarry Smith Routines that get memory usage information from the OS 1382d382aafbSBarry Smith */ 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1386b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1387d382aafbSBarry Smith 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1389d382aafbSBarry Smith 1390d382aafbSBarry Smith /* 1391d382aafbSBarry Smith Initialization of PETSc 1392d382aafbSBarry Smith */ 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1403d382aafbSBarry Smith 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1405607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1406d382aafbSBarry Smith 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1409014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1411d382aafbSBarry Smith 1412a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1413a50e088cSMatthew G. Knepley 1414a50e088cSMatthew G. Knepley 1415d382aafbSBarry Smith /* 1416d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14172981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1418d382aafbSBarry Smith */ 1419638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1420638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1421638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith /* 1424d382aafbSBarry Smith Functions that can act on any PETSc object. 1425d382aafbSBarry Smith */ 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1444bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1445bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14480eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14490eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1451d382aafbSBarry Smith 1452665c2dedSJed Brown #include <petscviewertypes.h> 1453639ff905SBarry Smith #include <petscoptions.h> 1454639ff905SBarry Smith 1455608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1456608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1457608c71bfSMatthew G. Knepley 14580633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14590633abcbSJed Brown 1460c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1461dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1462639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14630005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14640005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1472685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14754099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1477b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1480d382aafbSBarry Smith 1481e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14827aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1483e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1484e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1485e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1486e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1487e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1488e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1489e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1490e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1491e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 149215681b3cSBarry Smith 1493ec7429eaSBarry Smith #else 14947aab2a10SBarry Smith #define PetscSAWsBlock() 0 1495e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1496e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1497e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1498e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1499e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1500e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1501e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1502e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1503e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 150415681b3cSBarry Smith 1505ec7429eaSBarry Smith #endif 1506b90c6cbeSBarry Smith 150782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 150882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 150982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 15107d5d4d99SBarry Smith 15115fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1512a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15135fe58b6fSBarry Smith #endif 15147eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1515a64a8e02SBarry Smith 1516140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1517140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1518140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1519140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1520140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1521140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1522d382aafbSBarry Smith 1523d382aafbSBarry Smith /* 1524503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1525d382aafbSBarry Smith link libraries that will be loaded as needed. 1526d382aafbSBarry Smith */ 1527a240a19fSJed Brown 1528a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1529a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1530140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15311c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15321c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 153344ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1534140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1535140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1536140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1537d382aafbSBarry Smith 1538014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1539014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1546d382aafbSBarry Smith 1547d382aafbSBarry Smith /* 1548d382aafbSBarry Smith Useful utility routines 1549d382aafbSBarry Smith */ 1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1552d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1554014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1555014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1556014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15576ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15586ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1559d382aafbSBarry Smith 156064ac3b0dSPatrick Sanan /*MC 1561ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1562503cfb0cSBarry Smith 1563e28ce29aSPatrick Sanan Notes: 1564e28ce29aSPatrick Sanan This is useful in cases like 1565503cfb0cSBarry Smith $ int *a; 1566ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15671cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 156864ac3b0dSPatrick Sanan 156964ac3b0dSPatrick Sanan Level: beginner 157064ac3b0dSPatrick Sanan 157164ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 157264ac3b0dSPatrick Sanan M*/ 1573d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1574503cfb0cSBarry Smith 1575d382aafbSBarry Smith /*MC 1576d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1577d382aafbSBarry Smith 1578d382aafbSBarry Smith Synopsis: 1579aaa7dc30SBarry Smith #include <petscsys.h> 1580659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1581d382aafbSBarry Smith 1582659f7ba0SBarry Smith Collective on comm 1583eca87e8dSBarry Smith 1584d382aafbSBarry Smith Input Parameters: 1585659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1586d382aafbSBarry Smith . format - the usual printf() format string 1587659f7ba0SBarry Smith - args - arguments to be printed 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith Level: developer 1590d382aafbSBarry Smith 1591d382aafbSBarry Smith Fortran Note: 1592d382aafbSBarry Smith This routine is not supported in Fortran. 1593d382aafbSBarry Smith 1594659f7ba0SBarry Smith Note: 1595659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1596659f7ba0SBarry Smith 1597659f7ba0SBarry Smith To use, write your own function, for example, 1598659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1599659f7ba0SBarry Smith ${ 1600659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1601659f7ba0SBarry Smith $} 1602659f7ba0SBarry Smith then do the assigment 1603659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1604659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1605659f7ba0SBarry Smith 1606659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1607d382aafbSBarry Smith 1608d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1609d382aafbSBarry Smith M*/ 1610014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1611d382aafbSBarry Smith 1612fcfd50ebSBarry Smith /* 1613fcfd50ebSBarry Smith Defines PETSc profiling. 1614fcfd50ebSBarry Smith */ 16152c8e378dSBarry Smith #include <petsclog.h> 1616fcfd50ebSBarry Smith 1617fcfd50ebSBarry Smith /* 1618fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1619fcfd50ebSBarry Smith */ 1620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16271b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1628fcfd50ebSBarry Smith 1629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1632d382aafbSBarry Smith 1633d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1634d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1635d781fa04SBarry Smith 1636d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1638016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 163974ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1640d382aafbSBarry Smith #endif 1641d382aafbSBarry Smith 1642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16440ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1648014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1649d382aafbSBarry Smith 1650014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1656b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1657d382aafbSBarry Smith 1658d382aafbSBarry Smith /* 1659d382aafbSBarry Smith For use in debuggers 1660d382aafbSBarry Smith */ 1661014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1662014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1663014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1666d382aafbSBarry Smith 1667a663daf8SBarry Smith #include <stddef.h> 1668a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1669d382aafbSBarry Smith #include <stdlib.h> 16706c7e564aSBarry Smith 16714a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1672d382aafbSBarry Smith #include <xmmintrin.h> 1673d382aafbSBarry Smith #endif 1674d382aafbSBarry Smith 1675d382aafbSBarry Smith /*@C 1676580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1677580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1678580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1679580bdb30SBarry Smith 1680580bdb30SBarry Smith Not Collective 1681580bdb30SBarry Smith 1682580bdb30SBarry Smith Input Parameters: 1683580bdb30SBarry Smith + b - pointer to initial memory space 1684580bdb30SBarry Smith . a - pointer to copy space 1685580bdb30SBarry Smith - n - length (in bytes) of space to copy 1686580bdb30SBarry Smith 1687580bdb30SBarry Smith Level: intermediate 1688580bdb30SBarry Smith 1689580bdb30SBarry Smith Note: 1690857a15f1SBarry Smith PetscArraymove() is preferred 1691580bdb30SBarry Smith This routine is analogous to memmove(). 1692580bdb30SBarry Smith 1693580bdb30SBarry Smith Developers Note: This is inlined for performance 1694580bdb30SBarry Smith 1695580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1696580bdb30SBarry Smith PetscArraymove() 1697580bdb30SBarry Smith @*/ 1698580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1699580bdb30SBarry Smith { 1700580bdb30SBarry Smith PetscFunctionBegin; 1701580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1702580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1703580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1704580bdb30SBarry Smith if (a < b) { 1705580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1706580bdb30SBarry Smith else { 1707580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1708580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1709580bdb30SBarry Smith } 1710580bdb30SBarry Smith } else { 1711580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1712580bdb30SBarry Smith else { 1713580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1714580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1715580bdb30SBarry Smith } 1716580bdb30SBarry Smith } 1717580bdb30SBarry Smith #else 1718580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1719580bdb30SBarry Smith #endif 1720580bdb30SBarry Smith PetscFunctionReturn(0); 1721580bdb30SBarry Smith } 1722580bdb30SBarry Smith 1723d382aafbSBarry Smith /*@C 1724d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1725d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1726d382aafbSBarry Smith PetscMemmove() in that case. 1727d382aafbSBarry Smith 1728d382aafbSBarry Smith Not Collective 1729d382aafbSBarry Smith 1730d382aafbSBarry Smith Input Parameters: 1731d382aafbSBarry Smith + b - pointer to initial memory space 1732d382aafbSBarry Smith - n - length (in bytes) of space to copy 1733d382aafbSBarry Smith 1734d382aafbSBarry Smith Output Parameter: 1735d382aafbSBarry Smith . a - pointer to copy space 1736d382aafbSBarry Smith 1737d382aafbSBarry Smith Level: intermediate 1738d382aafbSBarry Smith 1739d382aafbSBarry Smith Compile Option: 1740d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1741d382aafbSBarry Smith for memory copies on double precision values. 1742d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1743d382aafbSBarry Smith for memory copies on double precision values. 1744d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1745d382aafbSBarry Smith for memory copies on double precision values. 1746d382aafbSBarry Smith 1747d382aafbSBarry Smith Note: 1748580bdb30SBarry Smith Prefer PetscArraycpy() 1749d382aafbSBarry Smith This routine is analogous to memcpy(). 17501fd49c25SBarry Smith Not available from Fortran 17511fd49c25SBarry Smith 1752f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1753f5f57ec0SBarry Smith 1754580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1755d382aafbSBarry Smith 1756d382aafbSBarry Smith @*/ 17577087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1758d382aafbSBarry Smith { 1759d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1760c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1761c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1762a7e36092SMatthew G Knepley PetscFunctionBegin; 1763e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1764e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1765a7e36092SMatthew G Knepley #else 1766d382aafbSBarry Smith PetscFunctionBegin; 1767a7e36092SMatthew G Knepley #endif 1768a47a537aSLisandro Dalcin if (a != b && n > 0) { 1769d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1770e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1771d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1772d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1773d382aafbSBarry Smith #endif 1774d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1775c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1776d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1777d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1778c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1779c5df96a5SBarry Smith PetscErrorCode ierr; 1780c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17818b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1782d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1783d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1784d382aafbSBarry Smith #else 1785d382aafbSBarry Smith size_t i; 1786d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1787d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1788d382aafbSBarry Smith #endif 1789d382aafbSBarry Smith } else { 1790d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1791d382aafbSBarry Smith } 1792d382aafbSBarry Smith #else 1793d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1794d382aafbSBarry Smith #endif 1795d382aafbSBarry Smith } 1796d382aafbSBarry Smith PetscFunctionReturn(0); 1797d382aafbSBarry Smith } 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith /*@C 1800d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith Not Collective 1803d382aafbSBarry Smith 1804d382aafbSBarry Smith Input Parameters: 1805d382aafbSBarry Smith + a - pointer to beginning memory location 1806d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1807d382aafbSBarry Smith 1808d382aafbSBarry Smith Level: intermediate 1809d382aafbSBarry Smith 1810d382aafbSBarry Smith Compile Option: 1811d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1812d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1813d382aafbSBarry Smith 18141fd49c25SBarry Smith Not available from Fortran 1815857a15f1SBarry Smith Prefer PetscArrayzero() 18161fd49c25SBarry Smith 1817503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1818503cfb0cSBarry Smith 1819580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1820d382aafbSBarry Smith @*/ 18217087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1822d382aafbSBarry Smith { 1823d382aafbSBarry Smith if (n > 0) { 1824d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 182518703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1826d382aafbSBarry Smith #endif 1827d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1828d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1829d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1830d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1831d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1832d382aafbSBarry Smith } else { 1833d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1834d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1835d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1836d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1837d382aafbSBarry Smith } else { 1838d382aafbSBarry Smith #endif 1839d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1840d382aafbSBarry Smith bzero((char *)a,n); 1841d382aafbSBarry Smith #else 1842d382aafbSBarry Smith memset((char*)a,0,n); 1843d382aafbSBarry Smith #endif 1844d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1845d382aafbSBarry Smith } 1846d382aafbSBarry Smith #endif 1847d382aafbSBarry Smith } 1848d382aafbSBarry Smith return 0; 1849d382aafbSBarry Smith } 1850d382aafbSBarry Smith 1851d382aafbSBarry Smith /*MC 1852580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1853580bdb30SBarry Smith 1854580bdb30SBarry Smith Synopsis: 1855580bdb30SBarry Smith #include <petscsys.h> 1856580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1857580bdb30SBarry Smith 1858580bdb30SBarry Smith Not Collective 1859580bdb30SBarry Smith 1860580bdb30SBarry Smith Input Parameters: 1861580bdb30SBarry Smith + str1 - First array 1862580bdb30SBarry Smith . str2 - Second array 1863580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1864580bdb30SBarry Smith 1865580bdb30SBarry Smith Output Parameters: 1866580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1867580bdb30SBarry Smith 1868580bdb30SBarry Smith Level: intermediate 1869580bdb30SBarry Smith 1870580bdb30SBarry Smith Note: 1871857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1872580bdb30SBarry Smith The arrays must be of the same type 1873580bdb30SBarry Smith 1874580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1875580bdb30SBarry Smith PetscArraymove() 1876580bdb30SBarry Smith M*/ 18779e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1878580bdb30SBarry Smith 18798f8f2f0dSBarry Smith /*MC 1880580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1881580bdb30SBarry Smith do not overlap 1882580bdb30SBarry Smith 1883580bdb30SBarry Smith Synopsis: 1884580bdb30SBarry Smith #include <petscsys.h> 1885580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1886580bdb30SBarry Smith 1887580bdb30SBarry Smith Not Collective 1888580bdb30SBarry Smith 1889580bdb30SBarry Smith Input Parameters: 1890580bdb30SBarry Smith + str1 - First array 1891580bdb30SBarry Smith . str2 - Second array 1892580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1893580bdb30SBarry Smith 1894580bdb30SBarry Smith Level: intermediate 1895580bdb30SBarry Smith 1896580bdb30SBarry Smith Note: 1897857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1898580bdb30SBarry Smith The arrays must be of the same type 1899580bdb30SBarry Smith 1900580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1901580bdb30SBarry Smith M*/ 19029e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1903580bdb30SBarry Smith 19048f8f2f0dSBarry Smith /*MC 1905580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1906580bdb30SBarry Smith 1907580bdb30SBarry Smith Synopsis: 1908580bdb30SBarry Smith #include <petscsys.h> 1909580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1910580bdb30SBarry Smith 1911580bdb30SBarry Smith Not Collective 1912580bdb30SBarry Smith 1913580bdb30SBarry Smith Input Parameters: 1914de25709eSStefano Zampini + str1 - First array (destination) 1915de25709eSStefano Zampini . str2 - Second array (source) 1916580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1917580bdb30SBarry Smith 1918580bdb30SBarry Smith Level: intermediate 1919580bdb30SBarry Smith 1920580bdb30SBarry Smith Note: 1921857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1922580bdb30SBarry Smith The arrays must be of the same type 1923580bdb30SBarry Smith 1924580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1925580bdb30SBarry Smith M*/ 19269e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1927580bdb30SBarry Smith 19288f8f2f0dSBarry Smith /*MC 1929580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1930580bdb30SBarry Smith 1931580bdb30SBarry Smith Synopsis: 1932580bdb30SBarry Smith #include <petscsys.h> 1933580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1934580bdb30SBarry Smith 1935580bdb30SBarry Smith Not Collective 1936580bdb30SBarry Smith 1937580bdb30SBarry Smith Input Parameters: 1938580bdb30SBarry Smith + str1 - array 1939580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1940580bdb30SBarry Smith 1941580bdb30SBarry Smith Level: intermediate 1942580bdb30SBarry Smith 1943580bdb30SBarry Smith Note: 1944857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1945580bdb30SBarry Smith 1946580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1947580bdb30SBarry Smith M*/ 19489e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1949580bdb30SBarry Smith 1950d382aafbSBarry Smith /*MC 1951d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1952d382aafbSBarry Smith 1953eca87e8dSBarry Smith Synopsis: 1954aaa7dc30SBarry Smith #include <petscsys.h> 1955eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1956eca87e8dSBarry Smith 1957d382aafbSBarry Smith Not Collective 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith Input Parameters: 1960d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1961d382aafbSBarry Smith . n - number of elements to fetch 1962d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 196350d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1964d382aafbSBarry Smith 1965d382aafbSBarry Smith Level: developer 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith Notes: 1968d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1969d382aafbSBarry Smith 197050d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 197150d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 197250d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 197363cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 197463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 197563cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1976d382aafbSBarry Smith 1977d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1978d382aafbSBarry Smith address). 1979d382aafbSBarry Smith 1980d382aafbSBarry Smith M*/ 1981d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1982d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1983d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1984d382aafbSBarry Smith } while (0) 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith /* 1987d382aafbSBarry Smith Determine if some of the kernel computation routines use 1988d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1989d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1990d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1991e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1992d382aafbSBarry Smith */ 1993d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1994d382aafbSBarry Smith 1995d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1996d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1997d382aafbSBarry Smith #endif 1998d382aafbSBarry Smith 19995a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20005a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2001d382aafbSBarry Smith #endif 2002d382aafbSBarry Smith 2003d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2004d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2005d382aafbSBarry Smith #endif 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2008d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2009d382aafbSBarry Smith #endif 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2012d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2013d382aafbSBarry Smith #endif 2014d382aafbSBarry Smith 2015d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2016d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2017d382aafbSBarry Smith #endif 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2020d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2021d382aafbSBarry Smith #endif 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2024d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2025d382aafbSBarry Smith #endif 2026d382aafbSBarry Smith 2027d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2028d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2029d382aafbSBarry Smith #endif 2030d382aafbSBarry Smith 2031d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2032d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2033d382aafbSBarry Smith #endif 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2036d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2037d382aafbSBarry Smith #endif 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2040d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2041d382aafbSBarry Smith #endif 2042d382aafbSBarry Smith 2043d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2044d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2045d382aafbSBarry Smith #endif 2046d382aafbSBarry Smith 2047d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2048d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2049d382aafbSBarry Smith #endif 2050d382aafbSBarry Smith 2051d382aafbSBarry Smith #endif 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith /* 2054d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2055d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2056d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2057d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2058d382aafbSBarry Smith ugly extern "C" {} wrappers. 2059d382aafbSBarry Smith */ 2060d382aafbSBarry Smith #if defined(__cplusplus) 2061d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2062d382aafbSBarry Smith # define EXTERN_C_END } 2063d382aafbSBarry Smith #else 2064d382aafbSBarry Smith # define EXTERN_C_BEGIN 2065d382aafbSBarry Smith # define EXTERN_C_END 2066d382aafbSBarry Smith #endif 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2069d382aafbSBarry Smith 2070d382aafbSBarry Smith /*MC 2071d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2072d382aafbSBarry Smith communication 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith Level: beginner 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2077d382aafbSBarry Smith 2078d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2079d382aafbSBarry Smith M*/ 2080d382aafbSBarry Smith 2081d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2082014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2083014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2084c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2085c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2086c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2087c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2088d382aafbSBarry Smith #endif 2089d382aafbSBarry Smith 2090d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2093d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2094d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2095d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2096d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2097d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2098d382aafbSBarry Smith 209961b0d812SBarry Smith /*@C 2100c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2101c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2102c73702f5SBarry Smith 2103c73702f5SBarry Smith Not Collective 2104c73702f5SBarry Smith 2105c73702f5SBarry Smith Input Parameter: 2106c73702f5SBarry Smith . a - the PetscInt64 value 2107c73702f5SBarry Smith 2108c73702f5SBarry Smith Output Parameter: 2109c73702f5SBarry Smith . b - the resulting PetscInt value 2110c73702f5SBarry Smith 2111c73702f5SBarry Smith Level: advanced 2112c73702f5SBarry Smith 2113c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2114c73702f5SBarry Smith 2115c73702f5SBarry Smith Not available from Fortran 2116c73702f5SBarry Smith 211761778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2118c73702f5SBarry Smith @*/ 2119c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2120c73702f5SBarry Smith { 2121c73702f5SBarry Smith PetscFunctionBegin; 2122c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2123c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2124c73702f5SBarry Smith #endif 2125c73702f5SBarry Smith *b = (PetscInt)(a); 2126c73702f5SBarry Smith PetscFunctionReturn(0); 2127c73702f5SBarry Smith } 2128c73702f5SBarry Smith 2129c73702f5SBarry Smith /*@C 213061b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 213161b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 213261b0d812SBarry Smith 213361b0d812SBarry Smith Not Collective 213461b0d812SBarry Smith 213561b0d812SBarry Smith Input Parameter: 213661b0d812SBarry Smith . a - the PetscInt value 213761b0d812SBarry Smith 213861b0d812SBarry Smith Output Parameter: 213961b0d812SBarry Smith . b - the resulting PetscBLASInt value 214061b0d812SBarry Smith 214161b0d812SBarry Smith Level: advanced 214261b0d812SBarry Smith 21430bc7d38cSBarry Smith Notes: 21441fd49c25SBarry Smith Not available from Fortran 2145f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21461fd49c25SBarry Smith 2147c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 214861b0d812SBarry Smith @*/ 2149c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2150c5df96a5SBarry Smith { 2151c5df96a5SBarry Smith PetscFunctionBegin; 2152c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 215373f49a0bSSatish Balay *b = 0; 215461778c46SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running"); 2155c5df96a5SBarry Smith #endif 21560bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2157c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2158c5df96a5SBarry Smith PetscFunctionReturn(0); 2159c5df96a5SBarry Smith } 2160c5df96a5SBarry Smith 216161b0d812SBarry Smith /*@C 216261b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 216361b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 216461b0d812SBarry Smith 216561b0d812SBarry Smith Not Collective 216661b0d812SBarry Smith 216761b0d812SBarry Smith Input Parameter: 216861b0d812SBarry Smith . a - the PetscInt value 216961b0d812SBarry Smith 217061b0d812SBarry Smith Output Parameter: 217161b0d812SBarry Smith . b - the resulting PetscMPIInt value 217261b0d812SBarry Smith 217361b0d812SBarry Smith Level: advanced 217461b0d812SBarry Smith 21751fd49c25SBarry Smith Not available from Fortran 21761fd49c25SBarry Smith 2177c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 217861b0d812SBarry Smith @*/ 21794dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21804dc2109aSBarry Smith { 21814dc2109aSBarry Smith PetscFunctionBegin; 21824dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 218373f49a0bSSatish Balay *b = 0; 218461778c46SBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI, which is restricted to 32 bit integers"); 21854dc2109aSBarry Smith #endif 2186c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21874dc2109aSBarry Smith PetscFunctionReturn(0); 21884dc2109aSBarry Smith } 21894dc2109aSBarry Smith 2190bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21912f18eb33SBarry Smith 21922f18eb33SBarry Smith /*@C 21932f18eb33SBarry Smith 21942f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21952f18eb33SBarry Smith 21962f18eb33SBarry Smith Not Collective 21972f18eb33SBarry Smith 21982f18eb33SBarry Smith Input Parameter: 21992f18eb33SBarry Smith + a - the PetscReal value 22002f18eb33SBarry Smith - b - the second value 22012f18eb33SBarry Smith 2202390e1bf2SBarry Smith Returns: 2203390e1bf2SBarry Smith the result as a PetscInt value 22042f18eb33SBarry Smith 2205bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22062f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22072f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22082f18eb33SBarry Smith 2209e28ce29aSPatrick Sanan Developers Note: 2210e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22112f18eb33SBarry Smith 22122f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22132f18eb33SBarry Smith 22141fd49c25SBarry Smith Not available from Fortran 22151fd49c25SBarry Smith 22162f18eb33SBarry Smith Level: advanced 22172f18eb33SBarry Smith 221861778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22192f18eb33SBarry Smith @*/ 22202f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 22212f18eb33SBarry Smith { 2222bafee8b4SSatish Balay PetscInt64 r; 22232f18eb33SBarry Smith 2224bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22252f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22262f18eb33SBarry Smith return (PetscInt) r; 22272f18eb33SBarry Smith } 22282f18eb33SBarry Smith 22292f18eb33SBarry Smith /*@C 22302f18eb33SBarry Smith 22312f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22322f18eb33SBarry Smith 22332f18eb33SBarry Smith Not Collective 22342f18eb33SBarry Smith 22352f18eb33SBarry Smith Input Parameter: 22362f18eb33SBarry Smith + a - the PetscInt value 22372f18eb33SBarry Smith - b - the second value 22382f18eb33SBarry Smith 2239390e1bf2SBarry Smith Returns: 2240390e1bf2SBarry Smith the result as a PetscInt value 22412f18eb33SBarry Smith 2242bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22432f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 22442f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22452f18eb33SBarry Smith 22461fd49c25SBarry Smith Not available from Fortran 22471fd49c25SBarry Smith 22482f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22492f18eb33SBarry Smith 22502f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22512f18eb33SBarry Smith 22522f18eb33SBarry Smith Level: advanced 22532f18eb33SBarry Smith 225461778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22552f18eb33SBarry Smith @*/ 22562f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 22572f18eb33SBarry Smith { 2258bafee8b4SSatish Balay PetscInt64 r; 22592f18eb33SBarry Smith 2260bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22612f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22622f18eb33SBarry Smith return (PetscInt) r; 22632f18eb33SBarry Smith } 22642f18eb33SBarry Smith 2265f91af8c7SBarry Smith /*@C 2266f91af8c7SBarry Smith 2267f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2268f91af8c7SBarry Smith 2269f91af8c7SBarry Smith Not Collective 2270f91af8c7SBarry Smith 2271f91af8c7SBarry Smith Input Parameter: 2272f91af8c7SBarry Smith + a - the PetscInt value 2273f91af8c7SBarry Smith - b - the second value 2274f91af8c7SBarry Smith 2275390e1bf2SBarry Smith Returns: 2276390e1bf2SBarry Smith the result as a PetscInt value 2277f91af8c7SBarry Smith 2278bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2279f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2280f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2281f91af8c7SBarry Smith 2282f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2283f91af8c7SBarry Smith 2284f5f57ec0SBarry Smith Not available from Fortran 2285f5f57ec0SBarry Smith 2286f91af8c7SBarry Smith Level: advanced 2287f91af8c7SBarry Smith 228861778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2289f91af8c7SBarry Smith @*/ 2290f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2291f91af8c7SBarry Smith { 2292bafee8b4SSatish Balay PetscInt64 r; 2293f91af8c7SBarry Smith 2294bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2295f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2296f91af8c7SBarry Smith return (PetscInt) r; 2297f91af8c7SBarry Smith } 2298f91af8c7SBarry Smith 22992f18eb33SBarry Smith /*@C 23002f18eb33SBarry Smith 23012f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23022f18eb33SBarry Smith 23032f18eb33SBarry Smith Not Collective 23042f18eb33SBarry Smith 23052f18eb33SBarry Smith Input Parameter: 23062f18eb33SBarry Smith + a - the PetscInt value 23072f18eb33SBarry Smith - b - the second value 23082f18eb33SBarry Smith 23092f18eb33SBarry Smith Output Parameter:ma 2310390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23112f18eb33SBarry Smith 2312bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23132f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 23142f18eb33SBarry Smith 2315f5f57ec0SBarry Smith Not available from Fortran 2316f5f57ec0SBarry Smith 2317220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 23182f18eb33SBarry Smith 23192f18eb33SBarry Smith Level: advanced 23202f18eb33SBarry Smith 2321220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 23222f18eb33SBarry Smith @*/ 23232f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23242f18eb33SBarry Smith { 2325bafee8b4SSatish Balay PetscInt64 r; 23262f18eb33SBarry Smith 23272f18eb33SBarry Smith PetscFunctionBegin; 2328bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23292f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 233061778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23312f18eb33SBarry Smith #endif 2332f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2333f91af8c7SBarry Smith PetscFunctionReturn(0); 2334f91af8c7SBarry Smith } 2335f91af8c7SBarry Smith 2336f91af8c7SBarry Smith /*@C 2337f91af8c7SBarry Smith 2338fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2339f91af8c7SBarry Smith 2340f91af8c7SBarry Smith Not Collective 2341f91af8c7SBarry Smith 2342f91af8c7SBarry Smith Input Parameter: 2343f91af8c7SBarry Smith + a - the PetscInt value 2344f91af8c7SBarry Smith - b - the second value 2345f91af8c7SBarry Smith 2346f91af8c7SBarry Smith Output Parameter:ma 2347390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2348f91af8c7SBarry Smith 2349bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2350f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2351f91af8c7SBarry Smith 2352f5f57ec0SBarry Smith Not available from Fortran 2353f5f57ec0SBarry Smith 2354f91af8c7SBarry Smith Level: advanced 2355f91af8c7SBarry Smith 235661778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2357f91af8c7SBarry Smith @*/ 2358f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2359f91af8c7SBarry Smith { 2360bafee8b4SSatish Balay PetscInt64 r; 2361f91af8c7SBarry Smith 2362f91af8c7SBarry Smith PetscFunctionBegin; 2363bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2364f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 236561778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2366f91af8c7SBarry Smith #endif 2367f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23682f18eb33SBarry Smith PetscFunctionReturn(0); 23692f18eb33SBarry Smith } 2370c5df96a5SBarry Smith 2371d382aafbSBarry Smith /* 23722981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2373d382aafbSBarry Smith */ 2374d382aafbSBarry Smith #if defined(hz) 2375d382aafbSBarry Smith # undef hz 2376d382aafbSBarry Smith #endif 2377d382aafbSBarry Smith 237815a5570dSLisandro Dalcin #include <limits.h> 237915a5570dSLisandro Dalcin 238015a5570dSLisandro Dalcin /* The number of bits in a byte */ 238115a5570dSLisandro Dalcin 238215a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 238315a5570dSLisandro Dalcin 2384d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2385d382aafbSBarry Smith # include <sys/types.h> 2386d382aafbSBarry Smith #endif 2387d382aafbSBarry Smith 2388d382aafbSBarry Smith /*MC 2389d382aafbSBarry Smith 239066d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 239166d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 239266d79e26SBarry Smith 239366d79e26SBarry Smith 239466d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 239566d79e26SBarry Smith 239666d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 239766d79e26SBarry Smith 239866d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 239966d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 240066d79e26SBarry Smith 240166d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 240266d79e26SBarry Smith 240366d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 240466d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 240566d79e26SBarry Smith version number (x.y.z). 240666d79e26SBarry Smith 240766d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 240866d79e26SBarry Smith 240966d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 241066d79e26SBarry Smith 241166d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 241266d79e26SBarry Smith 241366d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 241466d79e26SBarry Smith 241566d79e26SBarry Smith Level: intermediate 241666d79e26SBarry Smith 241766d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 241866d79e26SBarry Smith 241966d79e26SBarry Smith M*/ 242066d79e26SBarry Smith 242166d79e26SBarry Smith /*MC 242266d79e26SBarry Smith 24231b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 24241b266c99SBarry Smith of every function and module definition you need something like 2425d382aafbSBarry Smith 2426d382aafbSBarry Smith $ 2427af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 24280f665fc7SPatrick Sanan $ use petscXXX 24291b266c99SBarry Smith 2430692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 24311b266c99SBarry Smith 2432d382aafbSBarry Smith $ XXX variablename 24331b266c99SBarry Smith $ type(tXXX) variablename 24341b266c99SBarry Smith 2435692afcd8SPatrick Sanan For example, 24361b266c99SBarry Smith 2437bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 24381b266c99SBarry Smith $ use petscvec 2439d382aafbSBarry Smith $ 2440692afcd8SPatrick Sanan $ Vec b 2441692afcd8SPatrick Sanan $ type(tVec) x 2442d382aafbSBarry Smith 2443d382aafbSBarry Smith Level: beginner 2444d382aafbSBarry Smith 2445d382aafbSBarry Smith M*/ 2446d382aafbSBarry Smith 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 245327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24545f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2455d382aafbSBarry Smith 24566a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24576a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24586a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2460ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 246122ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2463f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 246460e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2465d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24696c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 247017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 247117d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24735569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 247517df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 247739f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2479745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 248039f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24846c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24856c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2486e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2487ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2488ce605777SToby Isaac 24894d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2490676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2491676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2492676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 24934d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2494676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2495676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2496676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2497676f2a66SJacob Faibussowitsch 2498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2500d382aafbSBarry Smith 250176bdecfbSBarry Smith /*J 2502d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2503d382aafbSBarry Smith 2504d382aafbSBarry Smith Level: beginner 2505d382aafbSBarry Smith 2506e28ce29aSPatrick Sanan Notes: 2507e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 250825ccb61fSToby Isaac with the option --download-sprng or --download-random123 2509d382aafbSBarry Smith 25108f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 251176bdecfbSBarry Smith J*/ 251219fd82e9SBarry Smith typedef const char* PetscRandomType; 2513d382aafbSBarry Smith #define PETSCRAND "rand" 2514d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2515d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2516c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 251725ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2518808ba619SStefano Zampini #define PETSCCURAND "curand" 2519d382aafbSBarry Smith 2520d382aafbSBarry Smith /* Logging support */ 2521014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2522d382aafbSBarry Smith 2523607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2524d382aafbSBarry Smith 2525d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2526140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2527d382aafbSBarry Smith 2528bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 252919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 253119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2532fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2534d382aafbSBarry Smith 2535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2538808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2539808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2546d382aafbSBarry Smith 2547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2552014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2553014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 255497540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25558a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 255697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2557d382aafbSBarry Smith 255830815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 255930815ce0SLisandro Dalcin 25609860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25619860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2562f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2563f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2571c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2572e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2573c891a504SStefano Zampini #endif 2574d382aafbSBarry Smith 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2578d382aafbSBarry Smith 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 25852a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2586d382aafbSBarry Smith 2587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2592cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2593cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2594d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2595d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2596d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2597d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25986afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25996afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26006afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26016afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26026afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2603d382aafbSBarry Smith 26046145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26056145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26066145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26076145cd65SJed Brown 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2609d382aafbSBarry Smith 2610ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2611ce94432eSBarry Smith 261245487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 261345487dadSJed Brown 2614d382aafbSBarry Smith struct _n_PetscSubcomm { 2615d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2616d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2617306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 261845487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 261945487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2620708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 262145487dadSJed Brown PetscSubcommType type; 2622e5acf8a4SHong Zhang char *subcommprefix; 2623d382aafbSBarry Smith }; 2624d382aafbSBarry Smith 2625c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2626306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 262736be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 263265d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2633053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2634f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2635e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2636a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2637a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2638a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2639d382aafbSBarry Smith 26409962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26419962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26439962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26449962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26459962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26469962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26479962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26489962606eSBarry Smith 26495e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26505f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26515f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26525f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26535f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26545e71baefSBarry Smith 2655a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2656a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2657a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2658a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2659a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2660a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2661a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2662a32e93adSJunchao Zhang 266313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26640f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 266513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2666137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2667137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2668137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 266913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 267013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26710f453b92SJed Brown 26725e71baefSBarry Smith 2673471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2674471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2675471ecdacSJed Brown * possible. */ 26766a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2677d382aafbSBarry Smith 26789de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26799de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26809de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26819de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26829de0f6ecSBarry Smith 2683ace2fbaeSBarry Smith #include <stdarg.h> 2684ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2685ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2686ace2fbaeSBarry Smith 2687268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2688fbfcfee5SBarry Smith 26891f817a21SBarry Smith /*@C 26901f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26911f817a21SBarry Smith 26921f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26931f817a21SBarry Smith 26941f817a21SBarry Smith Input Parameters: 26951f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26961f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26971f817a21SBarry Smith 2698850545d0SSatish Balay Level: intermediate 2699850545d0SSatish Balay 2700f5f57ec0SBarry Smith Not available from Fortran 2701f5f57ec0SBarry Smith 27021f817a21SBarry Smith Options Database: 2703063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27041f817a21SBarry Smith @*/ 2705dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2706dff31646SBarry Smith { 2707dff31646SBarry Smith size_t len; 2708dff31646SBarry Smith char *vstring; 2709dff31646SBarry Smith PetscErrorCode ierr; 2710dff31646SBarry Smith 27111f817a21SBarry Smith PetscFunctionBegin; 27128d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2713dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 271435005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2715580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2716dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27171f817a21SBarry Smith PetscFunctionReturn(0); 2718dff31646SBarry Smith } 2719dff31646SBarry Smith 2720b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2721fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2722fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2723f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2724fe278a28SBarry Smith 2725f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2726f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2727b967cddfSBarry Smith 27289f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27299f4d3c52SBarry Smith 273004102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2731763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2732dff31646SBarry Smith 273368e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27345dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2735d382aafbSBarry Smith 2736b2566f29SBarry Smith 2737b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2738b2566f29SBarry Smith /* 2739b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2740b2566f29SBarry Smith */ 27418f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 274277a5e07dSBarry Smith 274377a5e07dSBarry Smith /*MC 274477a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 274577a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 274677a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 274777a5e07dSBarry Smith 2748d083f849SBarry Smith Collective 274977a5e07dSBarry Smith 275077a5e07dSBarry Smith Synopsis: 275177a5e07dSBarry Smith #include <petscsys.h> 275277a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 275377a5e07dSBarry Smith 275477a5e07dSBarry Smith Input Parameters: 275577a5e07dSBarry Smith + indata - pointer to the input data to be reduced 275677a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 275777a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 275877a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 275977a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 276077a5e07dSBarry Smith 276177a5e07dSBarry Smith Output Parameter: 276277a5e07dSBarry Smith . outdata - the reduced values 276377a5e07dSBarry Smith 2764e28ce29aSPatrick Sanan Notes: 2765e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 276677a5e07dSBarry Smith 276777a5e07dSBarry Smith Level: developer 276877a5e07dSBarry Smith 276977a5e07dSBarry Smith .seealso: MPI_Allreduce() 277077a5e07dSBarry Smith M*/ 2771fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2772b2566f29SBarry Smith #else 2773b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2774b2566f29SBarry Smith #endif 2775b2566f29SBarry Smith 2776b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27778198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27788198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27792f065d89SBarry Smith #endif 27808198064fSBarry Smith 278112801b39SBarry Smith /* 278260fbe2beSVaclav Hapla List of external packages and queries on it 278360fbe2beSVaclav Hapla */ 278460fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 278560fbe2beSVaclav Hapla 2786d382aafbSBarry Smith #endif 2787