1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 447d993e7Ssuyashtn Portions of this code are under: 547d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 6d382aafbSBarry Smith */ 76524c165SJacob Faibussowitsch #ifndef PETSCSYS_H 826bd1501SBarry Smith #define PETSCSYS_H 93ca90d2dSJacob Faibussowitsch 10d382aafbSBarry Smith /* ========================================================================== */ 11d382aafbSBarry Smith /* 12d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 131c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 141c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 151c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 161cc8b206SBarry Smith directory as the other PETSc include files. 17d382aafbSBarry Smith */ 182c8e378dSBarry Smith #include <petscconf.h> 191c77a0c5SBarry Smith #include <petscconf_poison.h> 202c8e378dSBarry Smith #include <petscfix.h> 21bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2233bb201bSJacob Faibussowitsch 23ac09b921SBarry Smith /* SUBMANSEC = Sys */ 24ac09b921SBarry Smith 2573fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2673fca5a0SBarry Smith /* 2773fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2873fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2973fca5a0SBarry Smith */ 30216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 3173fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3273fca5a0SBarry Smith #endif 33216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3473fca5a0SBarry Smith #define _BSD_SOURCE 3573fca5a0SBarry Smith #endif 3607f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3707f00807SSatish Balay #define _DEFAULT_SOURCE 3807f00807SSatish Balay #endif 39ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 40ea0fecefSShri Abhyankar #define _GNU_SOURCE 41ea0fecefSShri Abhyankar #endif 4273fca5a0SBarry Smith #endif 4373fca5a0SBarry Smith 44df4397b0SStefano Zampini #include <petscsystypes.h> 45df4397b0SStefano Zampini 46d382aafbSBarry Smith /* ========================================================================== */ 47d382aafbSBarry Smith 48d382aafbSBarry Smith /* 49d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 50d382aafbSBarry Smith 51d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 52d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 53d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 54d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 55d382aafbSBarry Smith mpicxx.h directly in their code 56d382aafbSBarry Smith */ 57fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 58d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 59fa9e63e2SJed Brown #endif 60fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 61d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 62fa9e63e2SJed Brown #endif 63e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 64e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 65e771154cSJed Brown #else 662c8e378dSBarry Smith #include <mpi.h> 67e771154cSJed Brown #endif 6865013866SBarry Smith 69d382aafbSBarry Smith /* 70a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 71a7886beaSBarry Smith This usually happens because 72a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 73a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 74a7886beaSBarry Smith */ 75a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 766524c165SJacob Faibussowitsch #ifndef MPIUNI_H 77a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 78a7886beaSBarry Smith #endif 7941f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 8041f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 8141f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8241f4af4cSSatish Balay #elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8341f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8441f4af4cSSatish Balay #endif 8541f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8641f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8741f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8841f4af4cSSatish Balay #elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8941f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 9041f4af4cSSatish Balay #endif 91a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9241f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 93a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 941c284764SMin RK #elif (MPICH_NUMVERSION / 100000000 != PETSC_HAVE_MPICH_NUMVERSION / 100000000) || (MPICH_NUMVERSION / 100000 < PETSC_HAVE_MPICH_NUMVERSION / 100000) || (MPICH_NUMVERSION / 100000 == PETSC_HAVE_MPICH_NUMVERSION / 100000 && MPICH_NUMVERSION % 100000 / 1000 < PETSC_HAVE_MPICH_NUMVERSION % 100000 / 1000) 95a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 96a7886beaSBarry Smith #endif 97a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 98a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 99a7886beaSBarry Smith #error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 1001c284764SMin RK #elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 101c3ac57cfSSatish Balay #error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 102a7886beaSBarry Smith #endif 103c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "p" 104c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "p" 105d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 106d97fd468SStefano Zampini #if !defined(MSMPI_VER) 107d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 108d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 109d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 110d97fd468SStefano Zampini #endif 111d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 112d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 113a7886beaSBarry Smith #endif 114a7886beaSBarry Smith 115c93fae50SJacob Faibussowitsch /* Format specifier for printing MPI_Comm (most implementations use 'int' as type) */ 116c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_COMM_FMT) 117c93fae50SJacob Faibussowitsch #define PETSC_MPI_COMM_FMT "d" 118c93fae50SJacob Faibussowitsch #endif 119c93fae50SJacob Faibussowitsch 120c93fae50SJacob Faibussowitsch #if !defined(PETSC_MPI_WIN_FMT) 121c93fae50SJacob Faibussowitsch #define PETSC_MPI_WIN_FMT "d" 122c93fae50SJacob Faibussowitsch #endif 123c93fae50SJacob Faibussowitsch 124a7886beaSBarry Smith /* 1252981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 126d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 127d382aafbSBarry Smith */ 128d382aafbSBarry Smith #include <stdio.h> 129d382aafbSBarry Smith 130d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 131d382aafbSBarry Smith #if !defined(MPIAPI) 132d382aafbSBarry Smith #define MPIAPI 133d382aafbSBarry Smith #endif 134d382aafbSBarry Smith 13593d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_ENUM PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscEnum); 13693d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_BOOL PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscBool); 137e28ce29aSPatrick Sanan 138e28ce29aSPatrick Sanan /*MC 13987497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 140e28ce29aSPatrick Sanan 141e28ce29aSPatrick Sanan Notes: 14287497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 143e28ce29aSPatrick Sanan 144e28ce29aSPatrick Sanan Level: beginner 145e28ce29aSPatrick Sanan 146db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 147e28ce29aSPatrick Sanan M*/ 148e28ce29aSPatrick Sanan 1497cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 150b7b8f77aSBarry Smith 151d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 152bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 153a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 154d382aafbSBarry Smith #else 155d382aafbSBarry Smith #define MPIU_INT MPI_INT 156a05e1a72SSatish Balay #define PetscInt_FMT "d" 157d382aafbSBarry Smith #endif 158d382aafbSBarry Smith 159503cfb0cSBarry Smith /* 160503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 161503cfb0cSBarry Smith */ 16293d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_SIZE_T PETSC_ATTRIBUTE_MPI_TYPE_TAG(size_t); 163d382aafbSBarry Smith 164d382aafbSBarry Smith /* 165d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 166d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 167d382aafbSBarry Smith */ 168014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 169d382aafbSBarry Smith 170d382aafbSBarry Smith /* 171d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 172d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 173d382aafbSBarry Smith */ 174014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 175d382aafbSBarry Smith 176c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 177c8b9133aSSatish Balay 1785c993f7fSStefano Zampini #if defined(__NEC__) 1795c993f7fSStefano Zampini #define PetscPragmaSIMD _Pragma("_NEC ivdep") 1805c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 181c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("vector") 1821dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 183c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("GCC ivdep") 184e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 185e5518150SSatish Balay #if defined(_MSC_VER) 186160a5775SAli Reza Khaz'ali #define PetscPragmaSIMD __pragma(omp simd) 187e5518150SSatish Balay #else 188e5518150SSatish Balay #define PetscPragmaSIMD _Pragma("omp simd") 189e5518150SSatish Balay #endif 190c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 191c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("_CRI ivdep") 192c8b9133aSSatish Balay #else 193c8b9133aSSatish Balay #define PetscPragmaSIMD 194c8b9133aSSatish Balay #endif 195c8b9133aSSatish Balay 196d382aafbSBarry Smith /* 197d382aafbSBarry Smith Declare extern C stuff after including external header files 198d382aafbSBarry Smith */ 199d382aafbSBarry Smith 2006a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 20170b3c8c7SBarry Smith 2026edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 2038b49ba18SBarry Smith /* 204390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 2058b49ba18SBarry Smith */ 2068b49ba18SBarry Smith #include <petscmath.h> 2078b49ba18SBarry Smith 2086a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 209d382aafbSBarry Smith 210d382aafbSBarry Smith /*MC 2110298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 212d382aafbSBarry Smith 213d382aafbSBarry Smith Level: beginner 214d382aafbSBarry Smith 215e28ce29aSPatrick Sanan Note: 21687497f52SBarry Smith Accepted by many PETSc functions to not set a parameter and instead use some default 217d382aafbSBarry Smith 21887497f52SBarry Smith Fortran Note: 21987497f52SBarry Smith This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 220d382aafbSBarry Smith 221db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 222d382aafbSBarry Smith 223d382aafbSBarry Smith M*/ 2240298fd71SBarry Smith #define PETSC_IGNORE NULL 225d382aafbSBarry Smith 226c528d872SBarry Smith /* This is deprecated */ 227c528d872SBarry Smith #define PETSC_NULL NULL 228c528d872SBarry Smith 229d382aafbSBarry Smith /*MC 230557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 231557d4da8SBarry Smith where you wish PETSc to use the default. 232557d4da8SBarry Smith 233557d4da8SBarry Smith Level: beginner 234557d4da8SBarry Smith 235db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 236557d4da8SBarry Smith 237557d4da8SBarry Smith M*/ 238557d4da8SBarry Smith #define PETSC_DECIDE -1 239557d4da8SBarry Smith 240557d4da8SBarry Smith /*MC 241d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 242d382aafbSBarry Smith where you wish PETSc to compute the required value. 243d382aafbSBarry Smith 244d382aafbSBarry Smith Level: beginner 245d382aafbSBarry Smith 246e28ce29aSPatrick Sanan Developer Note: 24787497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 24887497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 249557d4da8SBarry Smith 250db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 251d382aafbSBarry Smith 252d382aafbSBarry Smith M*/ 253d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 254d382aafbSBarry Smith 255d382aafbSBarry Smith /*MC 256557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 257557d4da8SBarry Smith where you wish PETSc to use the default. 258557d4da8SBarry Smith 259557d4da8SBarry Smith Level: beginner 260557d4da8SBarry Smith 26187497f52SBarry Smith Fortran Note: 26287497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 263557d4da8SBarry Smith 264db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 265557d4da8SBarry Smith 266557d4da8SBarry Smith M*/ 267557d4da8SBarry Smith #define PETSC_DEFAULT -2 268557d4da8SBarry Smith 269557d4da8SBarry Smith /*MC 27087497f52SBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents 271ea8fe74dSBarry Smith all the processes that PETSc knows about. 272d382aafbSBarry Smith 273d382aafbSBarry Smith Level: beginner 274d382aafbSBarry Smith 275e28ce29aSPatrick Sanan Notes: 27687497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 27787497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 27887497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 27987497f52SBarry Smith PetscInitialize(), but after `MPI_Init()` has been called. 280a990b902SBarry Smith 28187497f52SBarry Smith The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()` 282a990b902SBarry Smith is called because it may not have a valid value yet. 283d382aafbSBarry Smith 284db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 285d382aafbSBarry Smith 286d382aafbSBarry Smith M*/ 287014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 288d382aafbSBarry Smith 289d382aafbSBarry Smith /*MC 29087497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 291d382aafbSBarry Smith 292d382aafbSBarry Smith Level: beginner 293d382aafbSBarry Smith 294e28ce29aSPatrick Sanan Notes: 295e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 296a990b902SBarry Smith 297db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 298d382aafbSBarry Smith 299d382aafbSBarry Smith M*/ 300d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 301d382aafbSBarry Smith 3026de5d289SStefano Zampini /*MC 3036de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 30487497f52SBarry Smith MPI with `MPI_Init_thread()`. 3056de5d289SStefano Zampini 3066de5d289SStefano Zampini Level: beginner 3076de5d289SStefano Zampini 3086de5d289SStefano Zampini Notes: 30987497f52SBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`. 3106de5d289SStefano Zampini 311db781477SPatrick Sanan .seealso: `PetscInitialize()` 3126de5d289SStefano Zampini 3136de5d289SStefano Zampini M*/ 3146de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3156de5d289SStefano Zampini 316d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3178ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 318014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 319014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3204cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 321d382aafbSBarry Smith 322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 32557f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 32657f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 327d382aafbSBarry Smith 32859e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 32959e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 33059e55d94SJunchao Zhang #endif 33159e55d94SJunchao Zhang 33271438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 33371438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 33471438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 33571438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 33671438e86SJunchao Zhang #endif 33771438e86SJunchao Zhang 338540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 339540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 340540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 341540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 342540e20f2SPierre Jolivet #endif 343540e20f2SPierre Jolivet 344d382aafbSBarry Smith /*MC 34587497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 346d382aafbSBarry Smith 347eca87e8dSBarry Smith Synopsis: 348aaa7dc30SBarry Smith #include <petscsys.h> 349eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 350eca87e8dSBarry Smith 351eca87e8dSBarry Smith Not Collective 352eca87e8dSBarry Smith 353d382aafbSBarry Smith Input Parameter: 354d382aafbSBarry Smith . m - number of bytes to allocate 355d382aafbSBarry Smith 356d382aafbSBarry Smith Output Parameter: 357d382aafbSBarry Smith . result - memory allocated 358d382aafbSBarry Smith 359d382aafbSBarry Smith Level: beginner 360d382aafbSBarry Smith 36149d7da52SJed Brown Notes: 36249d7da52SJed Brown Memory is always allocated at least double aligned 363d382aafbSBarry Smith 36487497f52SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`. 365d382aafbSBarry Smith 366db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 367d382aafbSBarry Smith 368d382aafbSBarry Smith M*/ 369071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 370d382aafbSBarry Smith 371d382aafbSBarry Smith /*MC 372d5b43468SJose E. Roman PetscRealloc - Reallocates memory 3733221ece2SMatthew G. Knepley 3743221ece2SMatthew G. Knepley Synopsis: 3753221ece2SMatthew G. Knepley #include <petscsys.h> 3763221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3773221ece2SMatthew G. Knepley 3783221ece2SMatthew G. Knepley Not Collective 3793221ece2SMatthew G. Knepley 3803221ece2SMatthew G. Knepley Input Parameters: 3813221ece2SMatthew G. Knepley + m - number of bytes to allocate 38292f119d6SBarry Smith - result - previous memory 3833221ece2SMatthew G. Knepley 3843221ece2SMatthew G. Knepley Output Parameter: 3853221ece2SMatthew G. Knepley . result - new memory allocated 3863221ece2SMatthew G. Knepley 3873221ece2SMatthew G. Knepley Level: developer 3883221ece2SMatthew G. Knepley 3893221ece2SMatthew G. Knepley Notes: 3903221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 3913221ece2SMatthew G. Knepley 392db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 3933221ece2SMatthew G. Knepley 3943221ece2SMatthew G. Knepley M*/ 3953221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 3963221ece2SMatthew G. Knepley 3973221ece2SMatthew G. Knepley /*MC 39887497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 399d382aafbSBarry Smith 400d382aafbSBarry Smith Synopsis: 401aaa7dc30SBarry Smith #include <petscsys.h> 402d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 403d382aafbSBarry Smith 404eca87e8dSBarry Smith Not Collective 405eca87e8dSBarry Smith 406eca87e8dSBarry Smith Input Parameters: 407eca87e8dSBarry Smith . addr - address to align (any pointer type) 408eca87e8dSBarry Smith 409d382aafbSBarry Smith Level: developer 410d382aafbSBarry Smith 411db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 412d382aafbSBarry Smith 413d382aafbSBarry Smith M*/ 414d382aafbSBarry Smith #define PetscAddrAlign(a) (void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1)) 415d382aafbSBarry Smith 416d382aafbSBarry Smith /*MC 41787497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4188f51dc47SJunchao Zhang 4198f51dc47SJunchao Zhang Synopsis: 4208f51dc47SJunchao Zhang #include <petscsys.h> 4218f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4228f51dc47SJunchao Zhang 4238f51dc47SJunchao Zhang Not Collective 4248f51dc47SJunchao Zhang 4258f51dc47SJunchao Zhang Input Parameter: 4268f51dc47SJunchao Zhang . m - number of bytes to allocate 4278f51dc47SJunchao Zhang 4288f51dc47SJunchao Zhang Output Parameter: 4298f51dc47SJunchao Zhang . result - memory allocated 4308f51dc47SJunchao Zhang 4318f51dc47SJunchao Zhang Level: beginner 4328f51dc47SJunchao Zhang 4338f51dc47SJunchao Zhang Notes: 4348f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4358f51dc47SJunchao Zhang 4368f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4378f51dc47SJunchao Zhang 438db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4398f51dc47SJunchao Zhang 4408f51dc47SJunchao Zhang M*/ 44166122d6dSBarry Smith #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m), (result)) 4428f51dc47SJunchao Zhang 4438f51dc47SJunchao Zhang /*MC 44487497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 445d382aafbSBarry Smith 446eca87e8dSBarry Smith Synopsis: 447aaa7dc30SBarry Smith #include <petscsys.h> 448785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 449785e854fSJed Brown 450785e854fSJed Brown Not Collective 451785e854fSJed Brown 452785e854fSJed Brown Input Parameter: 453390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 454785e854fSJed Brown 455785e854fSJed Brown Output Parameter: 4561fe1b817SJunchao Zhang . r1 - memory allocated 457785e854fSJed Brown 458e28ce29aSPatrick Sanan Note: 459e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 46087497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 461390e1bf2SBarry Smith $ PetscInt *id; 462390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 463390e1bf2SBarry Smith not 464390e1bf2SBarry Smith $ PetscInt *id; 465390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 466390e1bf2SBarry Smith 46787497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 468390e1bf2SBarry Smith 469390e1bf2SBarry Smith Level: beginner 470785e854fSJed Brown 471db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 472785e854fSJed Brown 473785e854fSJed Brown M*/ 47466122d6dSBarry Smith #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 475785e854fSJed Brown 476785e854fSJed Brown /*MC 47787497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4781795a4d1SJed Brown 4791795a4d1SJed Brown Synopsis: 480aaa7dc30SBarry Smith #include <petscsys.h> 4811795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4821795a4d1SJed Brown 4831795a4d1SJed Brown Not Collective 4841795a4d1SJed Brown 4851795a4d1SJed Brown Input Parameter: 4861795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 4871795a4d1SJed Brown 4881795a4d1SJed Brown Output Parameter: 4891fe1b817SJunchao Zhang . r1 - memory allocated 4901795a4d1SJed Brown 491e28ce29aSPatrick Sanan Notes: 49287497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 493390e1bf2SBarry Smith 494390e1bf2SBarry Smith Level: beginner 4951795a4d1SJed Brown 496db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 4971795a4d1SJed Brown 4981795a4d1SJed Brown M*/ 49966122d6dSBarry Smith #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1)) 5001795a4d1SJed Brown 5011795a4d1SJed Brown /*MC 50287497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 503d382aafbSBarry Smith 504eca87e8dSBarry Smith Synopsis: 505aaa7dc30SBarry Smith #include <petscsys.h> 506dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 507eca87e8dSBarry Smith 508eca87e8dSBarry Smith Not Collective 509eca87e8dSBarry Smith 510d8d19677SJose E. Roman Input Parameters: 511d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 512dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 513d382aafbSBarry Smith 514d8d19677SJose E. Roman Output Parameters: 515d382aafbSBarry Smith + r1 - memory allocated in first chunk 516d382aafbSBarry Smith - r2 - memory allocated in second chunk 517d382aafbSBarry Smith 518d382aafbSBarry Smith Level: developer 519d382aafbSBarry Smith 520db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 521d382aafbSBarry Smith 522d382aafbSBarry Smith M*/ 52366122d6dSBarry Smith #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 524d382aafbSBarry Smith 525d382aafbSBarry Smith /*MC 52687497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 527d382aafbSBarry Smith 528eca87e8dSBarry Smith Synopsis: 529aaa7dc30SBarry Smith #include <petscsys.h> 5301795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 531eca87e8dSBarry Smith 532eca87e8dSBarry Smith Not Collective 533eca87e8dSBarry Smith 534d8d19677SJose E. Roman Input Parameters: 535d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5361795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5371795a4d1SJed Brown 538d8d19677SJose E. Roman Output Parameters: 5391795a4d1SJed Brown + r1 - memory allocated in first chunk 5401795a4d1SJed Brown - r2 - memory allocated in second chunk 5411795a4d1SJed Brown 5421795a4d1SJed Brown Level: developer 5431795a4d1SJed Brown 544db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5451795a4d1SJed Brown 5461795a4d1SJed Brown M*/ 54766122d6dSBarry Smith #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2)) 5481795a4d1SJed Brown 5491795a4d1SJed Brown /*MC 55087497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 551d382aafbSBarry Smith 552d382aafbSBarry Smith Synopsis: 553aaa7dc30SBarry Smith #include <petscsys.h> 554dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 555d382aafbSBarry Smith 556d382aafbSBarry Smith Not Collective 557d382aafbSBarry Smith 558d8d19677SJose E. Roman Input Parameters: 559d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 560d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 561dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 562d382aafbSBarry Smith 563d8d19677SJose E. Roman Output Parameters: 564d382aafbSBarry Smith + r1 - memory allocated in first chunk 565d382aafbSBarry Smith . r2 - memory allocated in second chunk 566d382aafbSBarry Smith - r3 - memory allocated in third chunk 567d382aafbSBarry Smith 568d382aafbSBarry Smith Level: developer 569d382aafbSBarry Smith 570db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 571d382aafbSBarry Smith 572d382aafbSBarry Smith M*/ 57366122d6dSBarry Smith #define PetscMalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 574d382aafbSBarry Smith 575d382aafbSBarry Smith /*MC 57687497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 577d382aafbSBarry Smith 578eca87e8dSBarry Smith Synopsis: 579aaa7dc30SBarry Smith #include <petscsys.h> 5801795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 581eca87e8dSBarry Smith 582eca87e8dSBarry Smith Not Collective 583eca87e8dSBarry Smith 584d8d19677SJose E. Roman Input Parameters: 585d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 586d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 5871795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 5881795a4d1SJed Brown 589d8d19677SJose E. Roman Output Parameters: 5901795a4d1SJed Brown + r1 - memory allocated in first chunk 5911795a4d1SJed Brown . r2 - memory allocated in second chunk 5921795a4d1SJed Brown - r3 - memory allocated in third chunk 5931795a4d1SJed Brown 5941795a4d1SJed Brown Level: developer 5951795a4d1SJed Brown 596db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 5971795a4d1SJed Brown 5981795a4d1SJed Brown M*/ 59966122d6dSBarry Smith #define PetscCalloc3(m1, r1, m2, r2, m3, r3) PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3)) 6001795a4d1SJed Brown 6011795a4d1SJed Brown /*MC 60287497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 603d382aafbSBarry Smith 604d382aafbSBarry Smith Synopsis: 605aaa7dc30SBarry Smith #include <petscsys.h> 606dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 607d382aafbSBarry Smith 608d382aafbSBarry Smith Not Collective 609d382aafbSBarry Smith 610d8d19677SJose E. Roman Input Parameters: 611d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 612d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 613d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 614dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 615d382aafbSBarry Smith 616d8d19677SJose E. Roman Output Parameters: 617d382aafbSBarry Smith + r1 - memory allocated in first chunk 618d382aafbSBarry Smith . r2 - memory allocated in second chunk 619d382aafbSBarry Smith . r3 - memory allocated in third chunk 620d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 621d382aafbSBarry Smith 622d382aafbSBarry Smith Level: developer 623d382aafbSBarry Smith 624db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 625d382aafbSBarry Smith 626d382aafbSBarry Smith M*/ 6279371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6289371c9d4SSatish Balay PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 629d382aafbSBarry Smith 630d382aafbSBarry Smith /*MC 63187497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 632d382aafbSBarry Smith 633eca87e8dSBarry Smith Synopsis: 634aaa7dc30SBarry Smith #include <petscsys.h> 6351795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 636eca87e8dSBarry Smith 637eca87e8dSBarry Smith Not Collective 638eca87e8dSBarry Smith 639e28ce29aSPatrick Sanan Input Parameters: 640d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 641d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 642d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6431795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6441795a4d1SJed Brown 645e28ce29aSPatrick Sanan Output Parameters: 6461795a4d1SJed Brown + r1 - memory allocated in first chunk 6471795a4d1SJed Brown . r2 - memory allocated in second chunk 6481795a4d1SJed Brown . r3 - memory allocated in third chunk 6491795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6501795a4d1SJed Brown 6511795a4d1SJed Brown Level: developer 6521795a4d1SJed Brown 653db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6541795a4d1SJed Brown 6551795a4d1SJed Brown M*/ 6569371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 6579371c9d4SSatish Balay PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4)) 6581795a4d1SJed Brown 6591795a4d1SJed Brown /*MC 66087497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 661d382aafbSBarry Smith 662d382aafbSBarry Smith Synopsis: 663aaa7dc30SBarry Smith #include <petscsys.h> 664dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 665d382aafbSBarry Smith 666d382aafbSBarry Smith Not Collective 667d382aafbSBarry Smith 668e28ce29aSPatrick Sanan Input Parameters: 669d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 670d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 671d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 672d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 673dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 674d382aafbSBarry Smith 675e28ce29aSPatrick Sanan Output Parameters: 676d382aafbSBarry Smith + r1 - memory allocated in first chunk 677d382aafbSBarry Smith . r2 - memory allocated in second chunk 678d382aafbSBarry Smith . r3 - memory allocated in third chunk 679d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 680d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 681d382aafbSBarry Smith 682d382aafbSBarry Smith Level: developer 683d382aafbSBarry Smith 684db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 685d382aafbSBarry Smith 686d382aafbSBarry Smith M*/ 6879371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 6889371c9d4SSatish Balay PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 689d382aafbSBarry Smith 690d382aafbSBarry Smith /*MC 69187497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 692d382aafbSBarry Smith 693eca87e8dSBarry Smith Synopsis: 694aaa7dc30SBarry Smith #include <petscsys.h> 6951795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 696eca87e8dSBarry Smith 697eca87e8dSBarry Smith Not Collective 698eca87e8dSBarry Smith 699e28ce29aSPatrick Sanan Input Parameters: 700d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 701d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 702d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 703d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7041795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7051795a4d1SJed Brown 706e28ce29aSPatrick Sanan Output Parameters: 7071795a4d1SJed Brown + r1 - memory allocated in first chunk 7081795a4d1SJed Brown . r2 - memory allocated in second chunk 7091795a4d1SJed Brown . r3 - memory allocated in third chunk 7101795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7111795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7121795a4d1SJed Brown 7131795a4d1SJed Brown Level: developer 7141795a4d1SJed Brown 715db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7161795a4d1SJed Brown 7171795a4d1SJed Brown M*/ 7189371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 7199371c9d4SSatish Balay PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5)) 720d382aafbSBarry Smith 721d382aafbSBarry Smith /*MC 72287497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 723d382aafbSBarry Smith 724d382aafbSBarry Smith Synopsis: 725aaa7dc30SBarry Smith #include <petscsys.h> 726dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 727d382aafbSBarry Smith 728d382aafbSBarry Smith Not Collective 729d382aafbSBarry Smith 730e28ce29aSPatrick Sanan Input Parameters: 731d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 732d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 733d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 734d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 735d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 736dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 737d382aafbSBarry Smith 738e28ce29aSPatrick Sanan Output Parameteasr: 739d382aafbSBarry Smith + r1 - memory allocated in first chunk 740d382aafbSBarry Smith . r2 - memory allocated in second chunk 741d382aafbSBarry Smith . r3 - memory allocated in third chunk 742d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 743d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 744d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 745d382aafbSBarry Smith 746d382aafbSBarry Smith Level: developer 747d382aafbSBarry Smith 748db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 749d382aafbSBarry Smith 750d382aafbSBarry Smith M*/ 7519371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 7529371c9d4SSatish Balay PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 753d382aafbSBarry Smith 754d382aafbSBarry Smith /*MC 75587497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 756d382aafbSBarry Smith 757eca87e8dSBarry Smith Synopsis: 758aaa7dc30SBarry Smith #include <petscsys.h> 7591795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 760eca87e8dSBarry Smith 761eca87e8dSBarry Smith Not Collective 762eca87e8dSBarry Smith 763e28ce29aSPatrick Sanan Input Parameters: 764d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 765d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 766d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 767d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 768d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7691795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7701795a4d1SJed Brown 771e28ce29aSPatrick Sanan Output Parameters: 7721795a4d1SJed Brown + r1 - memory allocated in first chunk 7731795a4d1SJed Brown . r2 - memory allocated in second chunk 7741795a4d1SJed Brown . r3 - memory allocated in third chunk 7751795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7761795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7771795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7781795a4d1SJed Brown 7791795a4d1SJed Brown Level: developer 7801795a4d1SJed Brown 781db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7821795a4d1SJed Brown 7831795a4d1SJed Brown M*/ 7849371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 7859371c9d4SSatish Balay PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6)) 7861795a4d1SJed Brown 7871795a4d1SJed Brown /*MC 78887497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 789d382aafbSBarry Smith 790d382aafbSBarry Smith Synopsis: 791aaa7dc30SBarry Smith #include <petscsys.h> 792dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 793d382aafbSBarry Smith 794d382aafbSBarry Smith Not Collective 795d382aafbSBarry Smith 796e28ce29aSPatrick Sanan Input Parameters: 797d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 798d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 799d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 800d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 801d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 802d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 803dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 804d382aafbSBarry Smith 805e28ce29aSPatrick Sanan Output Parameters: 806d382aafbSBarry Smith + r1 - memory allocated in first chunk 807d382aafbSBarry Smith . r2 - memory allocated in second chunk 808d382aafbSBarry Smith . r3 - memory allocated in third chunk 809d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 810d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 811d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 812eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 813d382aafbSBarry Smith 814d382aafbSBarry Smith Level: developer 815d382aafbSBarry Smith 816db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 817d382aafbSBarry Smith 818d382aafbSBarry Smith M*/ 8199371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8209371c9d4SSatish Balay PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 821d382aafbSBarry Smith 822d382aafbSBarry Smith /*MC 82387497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8241795a4d1SJed Brown 8251795a4d1SJed Brown Synopsis: 826aaa7dc30SBarry Smith #include <petscsys.h> 8271795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8281795a4d1SJed Brown 8291795a4d1SJed Brown Not Collective 8301795a4d1SJed Brown 831e28ce29aSPatrick Sanan Input Parameters: 8321795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8331795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8341795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8351795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8361795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8371795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8381795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8391795a4d1SJed Brown 840e28ce29aSPatrick Sanan Output Parameters: 8411795a4d1SJed Brown + r1 - memory allocated in first chunk 8421795a4d1SJed Brown . r2 - memory allocated in second chunk 8431795a4d1SJed Brown . r3 - memory allocated in third chunk 8441795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8451795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8461795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8471795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8481795a4d1SJed Brown 8491795a4d1SJed Brown Level: developer 8501795a4d1SJed Brown 851db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8521795a4d1SJed Brown 8531795a4d1SJed Brown M*/ 8549371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 8559371c9d4SSatish Balay PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (size_t)((size_t)m1) * sizeof(**(r1)), (r1), (size_t)((size_t)m2) * sizeof(**(r2)), (r2), (size_t)((size_t)m3) * sizeof(**(r3)), (r3), (size_t)((size_t)m4) * sizeof(**(r4)), (r4), (size_t)((size_t)m5) * sizeof(**(r5)), (r5), (size_t)((size_t)m6) * sizeof(**(r6)), (r6), (size_t)((size_t)m7) * sizeof(**(r7)), (r7)) 8561795a4d1SJed Brown 8571795a4d1SJed Brown /*MC 85887497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 859d382aafbSBarry Smith 860eca87e8dSBarry Smith Synopsis: 861aaa7dc30SBarry Smith #include <petscsys.h> 862b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 863eca87e8dSBarry Smith 864eca87e8dSBarry Smith Not Collective 865eca87e8dSBarry Smith 866d382aafbSBarry Smith Output Parameter: 867b00a9115SJed Brown . result - memory allocated, sized to match pointer type 868d382aafbSBarry Smith 869d382aafbSBarry Smith Level: beginner 870d382aafbSBarry Smith 871fea72eb4SStefano Zampini .seealso: `PetscFree()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc1()` 872d382aafbSBarry Smith 873d382aafbSBarry Smith M*/ 874b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 875ad0619ddSBarry Smith 8764dfa11a4SJacob Faibussowitsch #define PetscNewLog(o, b) PETSC_DEPRECATED_MACRO("GCC warning \"PetscNewLog is deprecated, use PetscNew() instead (since version 3.18)\"") PetscNew((b)) 877d382aafbSBarry Smith 878d382aafbSBarry Smith /*MC 879d382aafbSBarry Smith PetscFree - Frees memory 880d382aafbSBarry Smith 881eca87e8dSBarry Smith Synopsis: 882aaa7dc30SBarry Smith #include <petscsys.h> 883eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 884eca87e8dSBarry Smith 885eca87e8dSBarry Smith Not Collective 886eca87e8dSBarry Smith 887d382aafbSBarry Smith Input Parameter: 8887f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 889d382aafbSBarry Smith 890d382aafbSBarry Smith Level: beginner 891d382aafbSBarry Smith 89249d7da52SJed Brown Notes: 89387497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 894390e1bf2SBarry Smith 89587497f52SBarry Smith It is safe to call `PetscFree()` on a NULL pointer. 896d382aafbSBarry Smith 897fea72eb4SStefano Zampini .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc1()` 898d382aafbSBarry Smith 899d382aafbSBarry Smith M*/ 900ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = NULL, 0)) 901d382aafbSBarry Smith 902d382aafbSBarry Smith /*MC 90387497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 904d382aafbSBarry Smith 905eca87e8dSBarry Smith Synopsis: 906aaa7dc30SBarry Smith #include <petscsys.h> 907eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 908eca87e8dSBarry Smith 909eca87e8dSBarry Smith Not Collective 910eca87e8dSBarry Smith 911e28ce29aSPatrick Sanan Input Parameters: 912d382aafbSBarry Smith + memory1 - memory to free 913d382aafbSBarry Smith - memory2 - 2nd memory to free 914d382aafbSBarry Smith 915d382aafbSBarry Smith Level: developer 916d382aafbSBarry Smith 91795452b02SPatrick Sanan Notes: 91887497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 919d382aafbSBarry Smith 920db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 921d382aafbSBarry Smith 922d382aafbSBarry Smith M*/ 923ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 924d382aafbSBarry Smith 925d382aafbSBarry Smith /*MC 92687497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 927d382aafbSBarry Smith 928eca87e8dSBarry Smith Synopsis: 929aaa7dc30SBarry Smith #include <petscsys.h> 930eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 931eca87e8dSBarry Smith 932eca87e8dSBarry Smith Not Collective 933eca87e8dSBarry Smith 934e28ce29aSPatrick Sanan Input Parameters: 935d382aafbSBarry Smith + memory1 - memory to free 936d382aafbSBarry Smith . memory2 - 2nd memory to free 937d382aafbSBarry Smith - memory3 - 3rd memory to free 938d382aafbSBarry Smith 939d382aafbSBarry Smith Level: developer 940d382aafbSBarry Smith 94195452b02SPatrick Sanan Notes: 94287497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 943d382aafbSBarry Smith 944db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 945d382aafbSBarry Smith 946d382aafbSBarry Smith M*/ 947ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 948d382aafbSBarry Smith 949d382aafbSBarry Smith /*MC 95087497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 951d382aafbSBarry Smith 952eca87e8dSBarry Smith Synopsis: 953aaa7dc30SBarry Smith #include <petscsys.h> 954eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 955eca87e8dSBarry Smith 956eca87e8dSBarry Smith Not Collective 957eca87e8dSBarry Smith 958e28ce29aSPatrick Sanan Input Parameters: 959d382aafbSBarry Smith + m1 - memory to free 960d382aafbSBarry Smith . m2 - 2nd memory to free 961d382aafbSBarry Smith . m3 - 3rd memory to free 962d382aafbSBarry Smith - m4 - 4th memory to free 963d382aafbSBarry Smith 964d382aafbSBarry Smith Level: developer 965d382aafbSBarry Smith 96695452b02SPatrick Sanan Notes: 96787497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 968d382aafbSBarry Smith 969db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 970d382aafbSBarry Smith 971d382aafbSBarry Smith M*/ 972ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 973d382aafbSBarry Smith 974d382aafbSBarry Smith /*MC 97587497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 976d382aafbSBarry Smith 977eca87e8dSBarry Smith Synopsis: 978aaa7dc30SBarry Smith #include <petscsys.h> 979eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 980eca87e8dSBarry Smith 981eca87e8dSBarry Smith Not Collective 982eca87e8dSBarry Smith 983e28ce29aSPatrick Sanan Input Parameters: 984d382aafbSBarry Smith + m1 - memory to free 985d382aafbSBarry Smith . m2 - 2nd memory to free 986d382aafbSBarry Smith . m3 - 3rd memory to free 987d382aafbSBarry Smith . m4 - 4th memory to free 988d382aafbSBarry Smith - m5 - 5th memory to free 989d382aafbSBarry Smith 990d382aafbSBarry Smith Level: developer 991d382aafbSBarry Smith 99295452b02SPatrick Sanan Notes: 99387497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 994d382aafbSBarry Smith 995db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 996d382aafbSBarry Smith 997d382aafbSBarry Smith M*/ 998ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 999d382aafbSBarry Smith 1000d382aafbSBarry Smith /*MC 100187497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 1002d382aafbSBarry Smith 1003eca87e8dSBarry Smith Synopsis: 1004aaa7dc30SBarry Smith #include <petscsys.h> 1005eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1006eca87e8dSBarry Smith 1007eca87e8dSBarry Smith Not Collective 1008eca87e8dSBarry Smith 1009e28ce29aSPatrick Sanan Input Parameters: 1010d382aafbSBarry Smith + m1 - memory to free 1011d382aafbSBarry Smith . m2 - 2nd memory to free 1012d382aafbSBarry Smith . m3 - 3rd memory to free 1013d382aafbSBarry Smith . m4 - 4th memory to free 1014d382aafbSBarry Smith . m5 - 5th memory to free 1015d382aafbSBarry Smith - m6 - 6th memory to free 1016d382aafbSBarry Smith 1017d382aafbSBarry Smith Level: developer 1018d382aafbSBarry Smith 101995452b02SPatrick Sanan Notes: 102087497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1021d382aafbSBarry Smith 1022db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith M*/ 1025ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1026d382aafbSBarry Smith 1027d382aafbSBarry Smith /*MC 102887497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1029d382aafbSBarry Smith 1030eca87e8dSBarry Smith Synopsis: 1031aaa7dc30SBarry Smith #include <petscsys.h> 1032eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1033eca87e8dSBarry Smith 1034eca87e8dSBarry Smith Not Collective 1035eca87e8dSBarry Smith 1036e28ce29aSPatrick Sanan Input Parameters: 1037d382aafbSBarry Smith + m1 - memory to free 1038d382aafbSBarry Smith . m2 - 2nd memory to free 1039d382aafbSBarry Smith . m3 - 3rd memory to free 1040d382aafbSBarry Smith . m4 - 4th memory to free 1041d382aafbSBarry Smith . m5 - 5th memory to free 1042d382aafbSBarry Smith . m6 - 6th memory to free 1043d382aafbSBarry Smith - m7 - 7th memory to free 1044d382aafbSBarry Smith 1045d382aafbSBarry Smith Level: developer 1046d382aafbSBarry Smith 104795452b02SPatrick Sanan Notes: 104887497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1049d382aafbSBarry Smith 1050db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1051db781477SPatrick Sanan `PetscMalloc7()` 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith M*/ 1054ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1055d382aafbSBarry Smith 1056ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1057ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1058071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1059efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10603221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1061ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 106292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1063014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith /* 1066c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1067c1706be6SHong Zhang */ 1068c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1069c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 107031f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 107131f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 107231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 107331f06eaaSHong Zhang #endif 107459af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 107559af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 107659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 107759af0bd3SScott Kruger #endif 107859af0bd3SScott Kruger 1079a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 108036763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1081a5057860SBarry Smith 1082a5057860SBarry Smith /* 108366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1084d382aafbSBarry Smith */ 1085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 108692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1087014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1089e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1090e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 109192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 109292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1093efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 109492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 109592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1096608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1097608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1098d382aafbSBarry Smith 10996a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1100014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1101014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1102014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 11038e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1104d382aafbSBarry Smith 1105d382aafbSBarry Smith /* 1106d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1107d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1108d382aafbSBarry Smith functionality and/or error checking. 1109d382aafbSBarry Smith */ 1110014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void *, const void *, size_t, PetscBool *); 1111014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[], size_t *); 1112d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[], char, int *, char ***); 1113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int, char **); 1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[], const char[], PetscBool *); 1115014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[], const char[], PetscBool *); 1116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[], const char[], PetscBool *); 1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[], const char[], size_t, PetscBool *); 1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[], const char[]); 1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[], const char[]); 1120a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[], const char[], size_t); 1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[], const char[], size_t); 1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[], char, char *[]); 1123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11242f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1125014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[], char, char *[]); 1126014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[], const char[], char *[]); 1127014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[], const char[], char *[]); 1128014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[], const char[], PetscBool *); 11292c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[], const char[], PetscBool *); 1130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[], const char *const *, PetscInt *); 1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[], char *[]); 113247340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const *, char ***); 11336fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char ***); 11346991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt, const char *const *, char ***); 11356991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt, char ***); 1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm, const char[], char[], size_t); 1137d382aafbSBarry Smith 1138573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[], const char[], PetscBool *); 1139573b0fb4SBarry Smith 1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[], const char, PetscToken *); 1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken, char *[]); 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken *); 1143d382aafbSBarry Smith 1144e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[], const char[], char, PetscBool *); 114580b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char[]); 1146a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt, const char *const *, const char *, PetscInt *, PetscBool *); 1147a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const *, const char *, PetscEnum *, PetscBool *); 1148a53986e1SJed Brown 1149d382aafbSBarry Smith /* 1150d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1151d382aafbSBarry Smith */ 1152367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1153570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1154de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1155014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1156014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1157d9822059SBarry Smith #else 1158de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1159d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1160d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1161d9822059SBarry Smith #endif 116262e5d2d2SJDBetteridge PETSC_EXTERN MPI_Op Petsc_Garbage_SetIntersectOp; 116362e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 116462e5d2d2SJDBetteridge 11659e517322SPierre Jolivet #if defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16) 1166613bf2b2SPierre Jolivet /*MC 11679e517322SPierre Jolivet MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with 11689e517322SPierre Jolivet custom MPI_Datatype `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1169613bf2b2SPierre Jolivet 1170613bf2b2SPierre Jolivet Level: advanced 1171613bf2b2SPierre Jolivet 1172613bf2b2SPierre Jolivet Developer Note: 1173613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1174613bf2b2SPierre Jolivet 1175613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1176613bf2b2SPierre Jolivet M*/ 11779e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1178613bf2b2SPierre Jolivet #endif 1179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1180d382aafbSBarry Smith 118193d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 118293d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1183eb3f98d2SBarry Smith 118495c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1185d6a4318aSJed Brown 1186639ff905SBarry Smith /* 1187639ff905SBarry Smith Defines PETSc error handling. 1188639ff905SBarry Smith */ 1189639ff905SBarry Smith #include <petscerror.h> 1190d382aafbSBarry Smith 1191660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1192660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1193660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1194660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1195660278c0SBarry Smith 11960700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1197014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1198014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 120081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 120181256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 120281256985SMatthew G. Knepley 1203d382aafbSBarry Smith /* 1204d382aafbSBarry Smith Routines that get memory usage information from the OS 1205d382aafbSBarry Smith */ 1206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1208014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1209b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1210d382aafbSBarry Smith 1211014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1212d382aafbSBarry Smith 1213d382aafbSBarry Smith /* 1214d382aafbSBarry Smith Initialization of PETSc 1215d382aafbSBarry Smith */ 1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1217014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1219014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1220014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1225014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1226d382aafbSBarry Smith 1227014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1228607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1229d382aafbSBarry Smith 1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1232014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1234d382aafbSBarry Smith 1235a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1236a50e088cSMatthew G. Knepley 1237d382aafbSBarry Smith /* 1238d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12392981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1240d382aafbSBarry Smith */ 1241638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1242638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1243638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1244d382aafbSBarry Smith 1245d382aafbSBarry Smith /* 1246d382aafbSBarry Smith Functions that can act on any PETSc object. 1247d382aafbSBarry Smith */ 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1265bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 1266bdf89e91SBarry Smith #define PetscObjectComposeFunction(a, b, d) PetscObjectComposeFunction_Private(a, b, (PetscVoidFunction)(d)) 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12690eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12700eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1272d382aafbSBarry Smith 1273665c2dedSJed Brown #include <petscviewertypes.h> 1274639ff905SBarry Smith #include <petscoptions.h> 1275639ff905SBarry Smith 1276608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1277608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1278608c71bfSMatthew G. Knepley 12790633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 12800633abcbSJed Brown 1281c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1282dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1283639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 12840005d66cSJed Brown #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFunction *)(fptr)) 12850005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1293685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1296013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 12974099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1299b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1302d382aafbSBarry Smith 1303e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13047aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1305e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1306e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1307e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1308e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1309e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1310e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1311e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1312e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1313e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 131415681b3cSBarry Smith 1315ec7429eaSBarry Smith #else 13167aab2a10SBarry Smith #define PetscSAWsBlock() 0 1317e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1318e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj, flg) 0 1319e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1320e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1321e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1322e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1323e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1324e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1325e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 132615681b3cSBarry Smith 1327ec7429eaSBarry Smith #endif 1328b90c6cbeSBarry Smith 132982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 133082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 133182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1332258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1333258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1334258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1335258ec3d2SMatthew G. Knepley #endif 13367d5d4d99SBarry Smith 1337a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 1338a64a8e02SBarry Smith 1339*dfb7d7afSStefano Zampini PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 1340140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1341140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1342140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1343140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1344140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1345140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1346d382aafbSBarry Smith 1347d382aafbSBarry Smith /* 1348503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1349d382aafbSBarry Smith link libraries that will be loaded as needed. 1350d382aafbSBarry Smith */ 1351a240a19fSJed Brown 1352a240a19fSJed Brown #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFunction)(fptr)) 1353a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], void (*)(void)); 1354140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13550e6b6b59SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListClear(PetscFunctionList); 13561c9cd337SJed Brown #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFunction *)(fptr)) 13571c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], void (**)(void)); 135844ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1359140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1360140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1361140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13622e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13632e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1364d382aafbSBarry Smith 1365014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1373d382aafbSBarry Smith 1374d382aafbSBarry Smith /* 1375d382aafbSBarry Smith Useful utility routines 1376d382aafbSBarry Smith */ 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1379d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 138458b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 138558b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1386d382aafbSBarry Smith 138764ac3b0dSPatrick Sanan /*MC 138887497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1389503cfb0cSBarry Smith 139064ac3b0dSPatrick Sanan Level: beginner 139164ac3b0dSPatrick Sanan 1392a1cb98faSBarry Smith Note: 1393a1cb98faSBarry Smith This is useful in cases like 1394a1cb98faSBarry Smith .vb 1395a1cb98faSBarry Smith int *a; 1396a1cb98faSBarry Smith PetscBool flag = PetscNot(a) 1397a1cb98faSBarry Smith .ve 1398a1cb98faSBarry Smith where !a would not return a `PetscBool` because we cannot provide a cast from int to `PetscBool` in C. 1399a1cb98faSBarry Smith 1400a1cb98faSBarry Smith .seealso: `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 140164ac3b0dSPatrick Sanan M*/ 1402d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1403503cfb0cSBarry Smith 1404d382aafbSBarry Smith /*MC 1405d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1406d382aafbSBarry Smith 1407cd05f99aSJacob Faibussowitsch Not Collective, only applies on rank 0; No Fortran Support 1408cf53795eSBarry Smith 1409d382aafbSBarry Smith Synopsis: 1410aaa7dc30SBarry Smith #include <petscsys.h> 1411659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1412d382aafbSBarry Smith 1413d382aafbSBarry Smith Input Parameters: 1414659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1415d382aafbSBarry Smith . format - the usual printf() format string 1416659f7ba0SBarry Smith - args - arguments to be printed 1417d382aafbSBarry Smith 1418d382aafbSBarry Smith Level: developer 1419d382aafbSBarry Smith 1420659f7ba0SBarry Smith Note: 1421659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1422659f7ba0SBarry Smith 1423659f7ba0SBarry Smith To use, write your own function, for example, 1424659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1425659f7ba0SBarry Smith ${ 1426659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1427659f7ba0SBarry Smith $} 1428d5b43468SJose E. Roman then do the assignment 1429659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 143087497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1431659f7ba0SBarry Smith 143287497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1433d382aafbSBarry Smith 1434db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1435d382aafbSBarry Smith M*/ 14363ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1437d382aafbSBarry Smith 1438fcfd50ebSBarry Smith /* 1439fcfd50ebSBarry Smith Defines PETSc profiling. 1440fcfd50ebSBarry Smith */ 14412c8e378dSBarry Smith #include <petsclog.h> 1442fcfd50ebSBarry Smith 1443fcfd50ebSBarry Smith /* 1444fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1445fcfd50ebSBarry Smith */ 1446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14493ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14503ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14513ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14523ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14531b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1454fcfd50ebSBarry Smith 14553ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14563ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14573ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1458d382aafbSBarry Smith 1459d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1460d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1461d781fa04SBarry Smith 1462d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1464016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 146574ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1466d382aafbSBarry Smith #endif 1467d382aafbSBarry Smith 14683ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14693ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14700ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm, const char[], const char[], FILE **); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1475d382aafbSBarry Smith 1476014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1482b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1483d382aafbSBarry Smith 1484d382aafbSBarry Smith /* 1485d382aafbSBarry Smith For use in debuggers 1486d382aafbSBarry Smith */ 1487014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1488014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1492d382aafbSBarry Smith 1493a663daf8SBarry Smith #include <stddef.h> 1494a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1495d382aafbSBarry Smith #include <stdlib.h> 14966c7e564aSBarry Smith 14974a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1498d382aafbSBarry Smith #include <xmmintrin.h> 1499d382aafbSBarry Smith #endif 1500d382aafbSBarry Smith 1501d382aafbSBarry Smith /*@C 1502580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1503580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 150487497f52SBarry Smith take place correctly. Use `PetscMemcpy()` if the locations do not overlap 1505580bdb30SBarry Smith 1506580bdb30SBarry Smith Not Collective 1507580bdb30SBarry Smith 1508580bdb30SBarry Smith Input Parameters: 1509580bdb30SBarry Smith + b - pointer to initial memory space 1510580bdb30SBarry Smith . a - pointer to copy space 1511580bdb30SBarry Smith - n - length (in bytes) of space to copy 1512580bdb30SBarry Smith 1513580bdb30SBarry Smith Level: intermediate 1514580bdb30SBarry Smith 151587497f52SBarry Smith Notes: 151687497f52SBarry Smith `PetscArraymove()` is preferred 1517580bdb30SBarry Smith 151887497f52SBarry Smith This routine is analogous to `memmove()`. 151987497f52SBarry Smith 152087497f52SBarry Smith Developers Note: 152187497f52SBarry Smith This is inlined for performance 1522580bdb30SBarry Smith 1523db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1524db781477SPatrick Sanan `PetscArraymove()` 1525580bdb30SBarry Smith @*/ 1526d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a, const void *b, size_t n) 1527d71ae5a4SJacob Faibussowitsch { 1528580bdb30SBarry Smith PetscFunctionBegin; 15299a202e32SJacob Faibussowitsch if (n > 0) { 15302c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to null pointer"); 15312c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 15329a202e32SJacob Faibussowitsch } 1533580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1534580bdb30SBarry Smith if (a < b) { 1535580bdb30SBarry Smith if (a <= b - n) memcpy(a, b, n); 1536580bdb30SBarry Smith else { 1537580bdb30SBarry Smith memcpy(a, b, (int)(b - a)); 1538580bdb30SBarry Smith PetscMemmove(b, b + (int)(b - a), n - (int)(b - a)); 1539580bdb30SBarry Smith } 1540580bdb30SBarry Smith } else { 1541580bdb30SBarry Smith if (b <= a - n) memcpy(a, b, n); 1542580bdb30SBarry Smith else { 1543580bdb30SBarry Smith memcpy(b + n, b + (n - (int)(a - b)), (int)(a - b)); 1544580bdb30SBarry Smith PetscMemmove(a, b, n - (int)(a - b)); 1545580bdb30SBarry Smith } 1546580bdb30SBarry Smith } 1547580bdb30SBarry Smith #else 1548580bdb30SBarry Smith memmove((char *)(a), (char *)(b), n); 1549580bdb30SBarry Smith #endif 1550580bdb30SBarry Smith PetscFunctionReturn(0); 1551580bdb30SBarry Smith } 1552580bdb30SBarry Smith 1553d382aafbSBarry Smith /*@C 1554d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1555d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 155687497f52SBarry Smith `PetscMemmove()` in that case. 1557d382aafbSBarry Smith 1558d382aafbSBarry Smith Not Collective 1559d382aafbSBarry Smith 1560d382aafbSBarry Smith Input Parameters: 1561d382aafbSBarry Smith + b - pointer to initial memory space 1562d382aafbSBarry Smith - n - length (in bytes) of space to copy 1563d382aafbSBarry Smith 1564d382aafbSBarry Smith Output Parameter: 1565d382aafbSBarry Smith . a - pointer to copy space 1566d382aafbSBarry Smith 1567d382aafbSBarry Smith Level: intermediate 1568d382aafbSBarry Smith 1569d382aafbSBarry Smith Compile Option: 157087497f52SBarry Smith `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used 1571d382aafbSBarry Smith for memory copies on double precision values. 157287497f52SBarry Smith `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used 1573d382aafbSBarry Smith for memory copies on double precision values. 157487497f52SBarry Smith `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used 1575d382aafbSBarry Smith for memory copies on double precision values. 1576d382aafbSBarry Smith 157787497f52SBarry Smith Notes: 157887497f52SBarry Smith Prefer `PetscArraycpy()` 157987497f52SBarry Smith 158087497f52SBarry Smith This routine is analogous to `memcpy()`. 158187497f52SBarry Smith 15821fd49c25SBarry Smith Not available from Fortran 15831fd49c25SBarry Smith 158487497f52SBarry Smith Developer Note: 158587497f52SBarry Smith This is inlined for fastest performance 1586f5f57ec0SBarry Smith 1587db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1588d382aafbSBarry Smith 1589d382aafbSBarry Smith @*/ 1590d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a, const void *b, size_t n) 1591d71ae5a4SJacob Faibussowitsch { 1592d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1593c5e4d11fSDmitry Karpeev size_t al = (size_t)a, bl = (size_t)b; 1594c5e4d11fSDmitry Karpeev size_t nl = (size_t)n; 1595a7e36092SMatthew G Knepley PetscFunctionBegin; 15969a202e32SJacob Faibussowitsch if (n > 0) { 15972c71b3e2SJacob Faibussowitsch PetscCheck(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy from a null pointer"); 15982c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy to a null pointer"); 15999a202e32SJacob Faibussowitsch } 1600a7e36092SMatthew G Knepley #else 1601d382aafbSBarry Smith PetscFunctionBegin; 1602a7e36092SMatthew G Knepley #endif 1603a47a537aSLisandro Dalcin if (a != b && n > 0) { 1604d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16052c71b3e2SJacob Faibussowitsch PetscCheck(!((al > bl && (al - bl) < nl) || (bl - al) < nl), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Memory regions overlap: either use PetscMemmov()\n\ 1606d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 16079371c9d4SSatish Balay Length (bytes) %zu first address %zu second address %zu", 16089371c9d4SSatish Balay nl, al, bl); 1609d382aafbSBarry Smith #endif 1610d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1611c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1612d382aafbSBarry Smith size_t len = n / sizeof(PetscScalar); 1613d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1614c5df96a5SBarry Smith PetscBLASInt one = 1, blen; 16159566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(len, &blen)); 1616792fecdfSBarry Smith PetscCallBLAS("BLAScopy", BLAScopy_(&blen, (PetscScalar *)b, &one, (PetscScalar *)a, &one)); 1617d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1618d382aafbSBarry Smith fortrancopy_(&len, (PetscScalar *)b, (PetscScalar *)a); 1619d382aafbSBarry Smith #else 1620d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)b, *y = (PetscScalar *)a; 16215f80ce2aSJacob Faibussowitsch for (size_t i = 0; i < len; i++) y[i] = x[i]; 1622d382aafbSBarry Smith #endif 1623d382aafbSBarry Smith } else { 1624d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1625d382aafbSBarry Smith } 1626d382aafbSBarry Smith #else 1627d382aafbSBarry Smith memcpy((char *)(a), (char *)(b), n); 1628d382aafbSBarry Smith #endif 1629d382aafbSBarry Smith } 1630d382aafbSBarry Smith PetscFunctionReturn(0); 1631d382aafbSBarry Smith } 1632d382aafbSBarry Smith 1633d382aafbSBarry Smith /*@C 1634d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1635d382aafbSBarry Smith 1636d382aafbSBarry Smith Not Collective 1637d382aafbSBarry Smith 1638d382aafbSBarry Smith Input Parameters: 1639d382aafbSBarry Smith + a - pointer to beginning memory location 1640d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1641d382aafbSBarry Smith 1642d382aafbSBarry Smith Level: intermediate 1643d382aafbSBarry Smith 1644d382aafbSBarry Smith Compile Option: 164587497f52SBarry Smith `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens 1646d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1647d382aafbSBarry Smith 164887497f52SBarry Smith Notes: 16491fd49c25SBarry Smith Not available from Fortran 16501fd49c25SBarry Smith 165187497f52SBarry Smith Prefer `PetscArrayzero()` 165287497f52SBarry Smith 165387497f52SBarry Smith Developer Note: 165487497f52SBarry Smith This is inlined for fastest performance 1655503cfb0cSBarry Smith 1656db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1657d382aafbSBarry Smith @*/ 1658d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a, size_t n) 1659d71ae5a4SJacob Faibussowitsch { 1660d382aafbSBarry Smith if (n > 0) { 1661d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 16622c71b3e2SJacob Faibussowitsch PetscCheck(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to zero at a null pointer with %zu bytes", n); 1663d382aafbSBarry Smith #endif 1664d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1665d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1666d382aafbSBarry Smith size_t i, len = n / sizeof(PetscScalar); 1667d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)a; 1668d382aafbSBarry Smith for (i = 0; i < len; i++) x[i] = 0.0; 1669d382aafbSBarry Smith } else { 1670d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1671d382aafbSBarry Smith if (!(((long)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1672d382aafbSBarry Smith PetscInt len = n / sizeof(PetscScalar); 1673d382aafbSBarry Smith fortranzero_(&len, (PetscScalar *)a); 1674d382aafbSBarry Smith } else { 1675d382aafbSBarry Smith #endif 1676d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1677d382aafbSBarry Smith bzero((char *)a, n); 1678d382aafbSBarry Smith #else 1679d382aafbSBarry Smith memset((char *)a, 0, n); 1680d382aafbSBarry Smith #endif 1681d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1682d382aafbSBarry Smith } 1683d382aafbSBarry Smith #endif 1684d382aafbSBarry Smith } 1685d382aafbSBarry Smith return 0; 1686d382aafbSBarry Smith } 1687d382aafbSBarry Smith 1688d382aafbSBarry Smith /*MC 1689580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1690580bdb30SBarry Smith 1691580bdb30SBarry Smith Synopsis: 1692580bdb30SBarry Smith #include <petscsys.h> 1693580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1694580bdb30SBarry Smith 1695580bdb30SBarry Smith Not Collective 1696580bdb30SBarry Smith 1697580bdb30SBarry Smith Input Parameters: 1698580bdb30SBarry Smith + str1 - First array 1699580bdb30SBarry Smith . str2 - Second array 1700580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1701580bdb30SBarry Smith 1702580bdb30SBarry Smith Output Parameters: 170387497f52SBarry Smith . e - `PETSC_TRUE` if equal else `PETSC_FALSE`. 1704580bdb30SBarry Smith 1705580bdb30SBarry Smith Level: intermediate 1706580bdb30SBarry Smith 170787497f52SBarry Smith Notes: 170887497f52SBarry Smith This routine is a preferred replacement to `PetscMemcmp()` 170987497f52SBarry Smith 1710580bdb30SBarry Smith The arrays must be of the same type 1711580bdb30SBarry Smith 1712db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1713db781477SPatrick Sanan `PetscArraymove()` 1714580bdb30SBarry Smith M*/ 17159e2232c7SLisandro Dalcin #define PetscArraycmp(str1, str2, cnt, e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1, str2, (size_t)(cnt) * sizeof(*(str1)), e)) 1716580bdb30SBarry Smith 17178f8f2f0dSBarry Smith /*MC 171887497f52SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays 1719580bdb30SBarry Smith do not overlap 1720580bdb30SBarry Smith 1721580bdb30SBarry Smith Synopsis: 1722580bdb30SBarry Smith #include <petscsys.h> 1723580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1724580bdb30SBarry Smith 1725580bdb30SBarry Smith Not Collective 1726580bdb30SBarry Smith 1727580bdb30SBarry Smith Input Parameters: 1728580bdb30SBarry Smith + str1 - First array 1729580bdb30SBarry Smith . str2 - Second array 1730580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1731580bdb30SBarry Smith 1732580bdb30SBarry Smith Level: intermediate 1733580bdb30SBarry Smith 173487497f52SBarry Smith Notes: 173587497f52SBarry Smith This routine is a preferred replacement to `PetscMemmove()` 173687497f52SBarry Smith 1737580bdb30SBarry Smith The arrays must be of the same type 1738580bdb30SBarry Smith 1739db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1740580bdb30SBarry Smith M*/ 17419e2232c7SLisandro Dalcin #define PetscArraymove(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1742580bdb30SBarry Smith 17438f8f2f0dSBarry Smith /*MC 1744580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1745580bdb30SBarry Smith 1746580bdb30SBarry Smith Synopsis: 1747580bdb30SBarry Smith #include <petscsys.h> 1748580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1749580bdb30SBarry Smith 1750580bdb30SBarry Smith Not Collective 1751580bdb30SBarry Smith 1752580bdb30SBarry Smith Input Parameters: 1753de25709eSStefano Zampini + str1 - First array (destination) 1754de25709eSStefano Zampini . str2 - Second array (source) 1755580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1756580bdb30SBarry Smith 1757580bdb30SBarry Smith Level: intermediate 1758580bdb30SBarry Smith 175987497f52SBarry Smith Notes: 176087497f52SBarry Smith This routine is a preferred replacement to `PetscMemcpy()` 176187497f52SBarry Smith 1762580bdb30SBarry Smith The arrays must be of the same type 1763580bdb30SBarry Smith 1764db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1765580bdb30SBarry Smith M*/ 17669e2232c7SLisandro Dalcin #define PetscArraycpy(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1, str2, (size_t)(cnt) * sizeof(*(str1)))) 1767580bdb30SBarry Smith 17688f8f2f0dSBarry Smith /*MC 1769580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1770580bdb30SBarry Smith 1771580bdb30SBarry Smith Synopsis: 1772580bdb30SBarry Smith #include <petscsys.h> 1773580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1774580bdb30SBarry Smith 1775580bdb30SBarry Smith Not Collective 1776580bdb30SBarry Smith 1777580bdb30SBarry Smith Input Parameters: 1778580bdb30SBarry Smith + str1 - array 1779580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1780580bdb30SBarry Smith 1781580bdb30SBarry Smith Level: intermediate 1782580bdb30SBarry Smith 1783580bdb30SBarry Smith Note: 178487497f52SBarry Smith This routine is a preferred replacement to `PetscMemzero()` 1785580bdb30SBarry Smith 1786db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1787580bdb30SBarry Smith M*/ 17889e2232c7SLisandro Dalcin #define PetscArrayzero(str1, cnt) PetscMemzero(str1, (size_t)(cnt) * sizeof(*(str1))) 1789580bdb30SBarry Smith 1790d382aafbSBarry Smith /*MC 1791d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1792d382aafbSBarry Smith 1793eca87e8dSBarry Smith Synopsis: 1794aaa7dc30SBarry Smith #include <petscsys.h> 1795eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1796eca87e8dSBarry Smith 1797d382aafbSBarry Smith Not Collective 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Input Parameters: 1800d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1801d382aafbSBarry Smith . n - number of elements to fetch 1802d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 180350d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1804d382aafbSBarry Smith 1805d382aafbSBarry Smith Level: developer 1806d382aafbSBarry Smith 1807d382aafbSBarry Smith Notes: 1808d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1809d382aafbSBarry Smith 181050d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 181150d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 181287497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 181387497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 181487497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 181587497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1816d382aafbSBarry Smith 1817d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1818d382aafbSBarry Smith address). 1819d382aafbSBarry Smith 1820d382aafbSBarry Smith M*/ 18219371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 18229371c9d4SSatish Balay do { \ 1823d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1824d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1825d382aafbSBarry Smith } while (0) 1826d382aafbSBarry Smith 1827d382aafbSBarry Smith /* 1828d382aafbSBarry Smith Determine if some of the kernel computation routines use 1829d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1830d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1831d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1832e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1833d382aafbSBarry Smith */ 1834d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1837d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1838d382aafbSBarry Smith #endif 1839d382aafbSBarry Smith 18405a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18415a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1842d382aafbSBarry Smith #endif 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1845d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1846d382aafbSBarry Smith #endif 1847d382aafbSBarry Smith 1848d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1849d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1850d382aafbSBarry Smith #endif 1851d382aafbSBarry Smith 1852d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1853d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1854d382aafbSBarry Smith #endif 1855d382aafbSBarry Smith 1856d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1857d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1858d382aafbSBarry Smith #endif 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1861d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1862d382aafbSBarry Smith #endif 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1865d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1866d382aafbSBarry Smith #endif 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1869d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1870d382aafbSBarry Smith #endif 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1873d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1874d382aafbSBarry Smith #endif 1875d382aafbSBarry Smith 1876d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1877d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1878d382aafbSBarry Smith #endif 1879d382aafbSBarry Smith 1880d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1881d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1882d382aafbSBarry Smith #endif 1883d382aafbSBarry Smith 1884d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1885d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1886d382aafbSBarry Smith #endif 1887d382aafbSBarry Smith 1888d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1889d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1890d382aafbSBarry Smith #endif 1891d382aafbSBarry Smith 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith /* 1895d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1896d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1897d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1898d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1899d382aafbSBarry Smith ugly extern "C" {} wrappers. 1900d382aafbSBarry Smith */ 1901d382aafbSBarry Smith #if defined(__cplusplus) 1902d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1903d382aafbSBarry Smith #define EXTERN_C_END } 1904d382aafbSBarry Smith #else 1905d382aafbSBarry Smith #define EXTERN_C_BEGIN 1906d382aafbSBarry Smith #define EXTERN_C_END 1907d382aafbSBarry Smith #endif 1908d382aafbSBarry Smith 1909d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1910d382aafbSBarry Smith 1911d382aafbSBarry Smith /*MC 1912d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1913d382aafbSBarry Smith communication 1914d382aafbSBarry Smith 1915d382aafbSBarry Smith Level: beginner 1916d382aafbSBarry Smith 1917d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1918d382aafbSBarry Smith 1919db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1920d382aafbSBarry Smith M*/ 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 192393d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 192493d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 192593d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 192693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 192793d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 192893d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1929d382aafbSBarry Smith #endif 1930d382aafbSBarry Smith 1931d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1932d382aafbSBarry Smith 1933d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1934d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1935d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1936d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1937d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1938d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1939eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 194047d993e7Ssuyashtn #define PETSC_HIPBLAS_INT_MAX 2147483647 1941d382aafbSBarry Smith 194261b0d812SBarry Smith /*@C 194387497f52SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an 194487497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1945c73702f5SBarry Smith 1946c73702f5SBarry Smith Not Collective 1947c73702f5SBarry Smith 1948c73702f5SBarry Smith Input Parameter: 194987497f52SBarry Smith . a - the `PetscInt64` value 1950c73702f5SBarry Smith 1951c73702f5SBarry Smith Output Parameter: 195287497f52SBarry Smith . b - the resulting `PetscInt` value 1953c73702f5SBarry Smith 1954c73702f5SBarry Smith Level: advanced 1955c73702f5SBarry Smith 195687497f52SBarry Smith Notes: 195787497f52SBarry Smith If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints 1958c73702f5SBarry Smith 1959c73702f5SBarry Smith Not available from Fortran 1960c73702f5SBarry Smith 1961db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1962c73702f5SBarry Smith @*/ 1963d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) 1964d71ae5a4SJacob Faibussowitsch { 1965c73702f5SBarry Smith PetscFunctionBegin; 1966c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 19673ca90d2dSJacob Faibussowitsch if (a > PETSC_MAX_INT) { 19683ca90d2dSJacob Faibussowitsch *b = 0; 196998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 19703ca90d2dSJacob Faibussowitsch } 1971c73702f5SBarry Smith #endif 1972c73702f5SBarry Smith *b = (PetscInt)(a); 1973c73702f5SBarry Smith PetscFunctionReturn(0); 1974c73702f5SBarry Smith } 1975c73702f5SBarry Smith 1976c73702f5SBarry Smith /*@C 197787497f52SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an 197887497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1979981bb840SJunchao Zhang 1980981bb840SJunchao Zhang Not Collective 1981981bb840SJunchao Zhang 1982981bb840SJunchao Zhang Input Parameter: 198387497f52SBarry Smith . a - the `PetscCount` value 1984981bb840SJunchao Zhang 1985981bb840SJunchao Zhang Output Parameter: 198687497f52SBarry Smith . b - the resulting `PetscInt` value 1987981bb840SJunchao Zhang 1988981bb840SJunchao Zhang Level: advanced 1989981bb840SJunchao Zhang 1990981bb840SJunchao Zhang Notes: 1991981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1992981bb840SJunchao Zhang 1993981bb840SJunchao Zhang Not available from Fortran 1994981bb840SJunchao Zhang 1995db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 1996981bb840SJunchao Zhang @*/ 1997d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) 1998d71ae5a4SJacob Faibussowitsch { 1999981bb840SJunchao Zhang PetscFunctionBegin; 2000981bb840SJunchao Zhang if (sizeof(PetscCount) > sizeof(PetscInt) && a > PETSC_MAX_INT) { 2001981bb840SJunchao Zhang *b = 0; 2002981bb840SJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 2003981bb840SJunchao Zhang } 2004981bb840SJunchao Zhang *b = (PetscInt)(a); 2005981bb840SJunchao Zhang PetscFunctionReturn(0); 2006981bb840SJunchao Zhang } 2007981bb840SJunchao Zhang 2008981bb840SJunchao Zhang /*@C 200987497f52SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an 201087497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 201161b0d812SBarry Smith 201261b0d812SBarry Smith Not Collective 201361b0d812SBarry Smith 201461b0d812SBarry Smith Input Parameter: 201587497f52SBarry Smith . a - the `PetscInt` value 201661b0d812SBarry Smith 201761b0d812SBarry Smith Output Parameter: 201887497f52SBarry Smith . b - the resulting `PetscBLASInt` value 201961b0d812SBarry Smith 202061b0d812SBarry Smith Level: advanced 202161b0d812SBarry Smith 20220bc7d38cSBarry Smith Notes: 20231fd49c25SBarry Smith Not available from Fortran 202487497f52SBarry Smith 2025f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20261fd49c25SBarry Smith 2027db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 202861b0d812SBarry Smith @*/ 2029d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) 2030d71ae5a4SJacob Faibussowitsch { 2031c5df96a5SBarry Smith PetscFunctionBegin; 203254c59aa7SJacob Faibussowitsch *b = 0; 203354c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 203454c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 203554c59aa7SJacob Faibussowitsch } 203654c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 2037c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2038c5df96a5SBarry Smith PetscFunctionReturn(0); 2039c5df96a5SBarry Smith } 2040c5df96a5SBarry Smith 204161b0d812SBarry Smith /*@C 204287497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 2043eee0c0a6SToby Isaac 2044eee0c0a6SToby Isaac Not Collective 2045eee0c0a6SToby Isaac 2046eee0c0a6SToby Isaac Input Parameter: 204787497f52SBarry Smith . a - the `PetscInt` value 2048eee0c0a6SToby Isaac 2049eee0c0a6SToby Isaac Output Parameter: 205087497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 2051eee0c0a6SToby Isaac 2052eee0c0a6SToby Isaac Level: advanced 2053eee0c0a6SToby Isaac 2054eee0c0a6SToby Isaac Notes: 2055eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2056eee0c0a6SToby Isaac 2057db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2058eee0c0a6SToby Isaac @*/ 2059d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) 2060d71ae5a4SJacob Faibussowitsch { 2061eee0c0a6SToby Isaac PetscFunctionBegin; 206254c59aa7SJacob Faibussowitsch *b = 0; 206354c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.", a); 206454c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to cuBLAS routine"); 2065eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2066eee0c0a6SToby Isaac PetscFunctionReturn(0); 2067eee0c0a6SToby Isaac } 2068eee0c0a6SToby Isaac 2069eee0c0a6SToby Isaac /*@C 207047d993e7Ssuyashtn PetscHipBLASIntCast - like `PetscBLASIntCast()`, but for `PetscHipBLASInt`. 207147d993e7Ssuyashtn 207247d993e7Ssuyashtn Not Collective 207347d993e7Ssuyashtn 207447d993e7Ssuyashtn Input Parameter: 207547d993e7Ssuyashtn . a - the `PetscInt` value 207647d993e7Ssuyashtn 207747d993e7Ssuyashtn Output Parameter: 207847d993e7Ssuyashtn . b - the resulting `PetscHipBLASInt` value 207947d993e7Ssuyashtn 208047d993e7Ssuyashtn Level: advanced 208147d993e7Ssuyashtn 208247d993e7Ssuyashtn Notes: 208347d993e7Ssuyashtn Errors if the integer is negative since PETSc calls to hipBLAS and friends never need to cast negative integer inputs 208447d993e7Ssuyashtn 208547d993e7Ssuyashtn .seealso: `PetscHipBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 208647d993e7Ssuyashtn @*/ 208747d993e7Ssuyashtn static inline PetscErrorCode PetscHipBLASIntCast(PetscInt a, PetscHipBLASInt *b) 208847d993e7Ssuyashtn { 208947d993e7Ssuyashtn PetscFunctionBegin; 209047d993e7Ssuyashtn *b = 0; 209147d993e7Ssuyashtn if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_HIPBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for hipBLAS, which is restricted to 32 bit integers.", a); 209247d993e7Ssuyashtn PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to hipBLAS routine"); 209347d993e7Ssuyashtn *b = (PetscHipBLASInt)(a); 209447d993e7Ssuyashtn PetscFunctionReturn(0); 209547d993e7Ssuyashtn } 209647d993e7Ssuyashtn 209747d993e7Ssuyashtn /*@C 209847d993e7Ssuyashtn PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 209947d993e7Ssuyashtn error if the PetscMPIInt is not large enough to hold the number. 210061b0d812SBarry Smith 210161b0d812SBarry Smith Not Collective 210261b0d812SBarry Smith 210361b0d812SBarry Smith Input Parameter: 210487497f52SBarry Smith . a - the `PetscInt` value 210561b0d812SBarry Smith 210661b0d812SBarry Smith Output Parameter: 210787497f52SBarry Smith . b - the resulting `PetscMPIInt` value 210861b0d812SBarry Smith 210961b0d812SBarry Smith Level: advanced 211061b0d812SBarry Smith 21111fd49c25SBarry Smith Not available from Fortran 21121fd49c25SBarry Smith 2113db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 211461b0d812SBarry Smith @*/ 2115d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) 2116d71ae5a4SJacob Faibussowitsch { 21174dc2109aSBarry Smith PetscFunctionBegin; 211854c59aa7SJacob Faibussowitsch *b = 0; 211954c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES)) PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. We currently only support 32 bit integers", a); 2120c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21214dc2109aSBarry Smith PetscFunctionReturn(0); 21224dc2109aSBarry Smith } 21234dc2109aSBarry Smith 2124bafee8b4SSatish Balay #define PetscInt64Mult(a, b) ((PetscInt64)(a)) * ((PetscInt64)(b)) 21252f18eb33SBarry Smith 21262f18eb33SBarry Smith /*@C 21272f18eb33SBarry Smith 212887497f52SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21292f18eb33SBarry Smith 21302f18eb33SBarry Smith Not Collective 21312f18eb33SBarry Smith 2132d8d19677SJose E. Roman Input Parameters: 213387497f52SBarry Smith + a - the `PetscReal` value 21342f18eb33SBarry Smith - b - the second value 21352f18eb33SBarry Smith 2136390e1bf2SBarry Smith Returns: 213787497f52SBarry Smith the result as a `PetscInt` value 21382f18eb33SBarry Smith 213987497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 214087497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate to fit a `PetscInt` 214187497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21422f18eb33SBarry Smith 2143e28ce29aSPatrick Sanan Developers Note: 214487497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21452f18eb33SBarry Smith 21462f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21472f18eb33SBarry Smith 21481fd49c25SBarry Smith Not available from Fortran 21491fd49c25SBarry Smith 21502f18eb33SBarry Smith Level: advanced 21512f18eb33SBarry Smith 2152db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21532f18eb33SBarry Smith @*/ 2154d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) 2155d71ae5a4SJacob Faibussowitsch { 21565f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 21572f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21582f18eb33SBarry Smith return (PetscInt)r; 21592f18eb33SBarry Smith } 21602f18eb33SBarry Smith 21612f18eb33SBarry Smith /*@C 21622f18eb33SBarry Smith 216387497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21642f18eb33SBarry Smith 21652f18eb33SBarry Smith Not Collective 21662f18eb33SBarry Smith 2167d8d19677SJose E. Roman Input Parameters: 21682f18eb33SBarry Smith + a - the PetscInt value 21692f18eb33SBarry Smith - b - the second value 21702f18eb33SBarry Smith 2171390e1bf2SBarry Smith Returns: 217287497f52SBarry Smith the result as a `PetscInt` value 21732f18eb33SBarry Smith 217487497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 217587497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 217687497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21772f18eb33SBarry Smith 21781fd49c25SBarry Smith Not available from Fortran 21791fd49c25SBarry Smith 218087497f52SBarry Smith Developers Note: 218187497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21822f18eb33SBarry Smith 21832f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21842f18eb33SBarry Smith 21852f18eb33SBarry Smith Level: advanced 21862f18eb33SBarry Smith 2187db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21882f18eb33SBarry Smith @*/ 2189d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) 2190d71ae5a4SJacob Faibussowitsch { 21915f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 21922f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21932f18eb33SBarry Smith return (PetscInt)r; 21942f18eb33SBarry Smith } 21952f18eb33SBarry Smith 2196f91af8c7SBarry Smith /*@C 2197f91af8c7SBarry Smith 219887497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 2199f91af8c7SBarry Smith 2200f91af8c7SBarry Smith Not Collective 2201f91af8c7SBarry Smith 2202d8d19677SJose E. Roman Input Parameters: 220387497f52SBarry Smith + a - the `PetscInt` value 2204f91af8c7SBarry Smith - b - the second value 2205f91af8c7SBarry Smith 2206390e1bf2SBarry Smith Returns: 220787497f52SBarry Smith the result as a `PetscInt` value 2208f91af8c7SBarry Smith 220987497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 221087497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 221187497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 2212f91af8c7SBarry Smith 2213f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2214f91af8c7SBarry Smith 2215f5f57ec0SBarry Smith Not available from Fortran 2216f5f57ec0SBarry Smith 2217f91af8c7SBarry Smith Level: advanced 2218f91af8c7SBarry Smith 2219db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2220f91af8c7SBarry Smith @*/ 2221d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) 2222d71ae5a4SJacob Faibussowitsch { 22235f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2224f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2225f91af8c7SBarry Smith return (PetscInt)r; 2226f91af8c7SBarry Smith } 2227f91af8c7SBarry Smith 22282f18eb33SBarry Smith /*@C 22292f18eb33SBarry Smith 223087497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 22312f18eb33SBarry Smith 22322f18eb33SBarry Smith Not Collective 22332f18eb33SBarry Smith 2234d8d19677SJose E. Roman Input Parameters: 223587497f52SBarry Smith + a - the `PetscInt` value 22362f18eb33SBarry Smith - b - the second value 22372f18eb33SBarry Smith 2238d8d19677SJose E. Roman Output Parameter: 223987497f52SBarry Smith . result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 22402f18eb33SBarry Smith 224187497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 224287497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 22432f18eb33SBarry Smith 2244f5f57ec0SBarry Smith Not available from Fortran 2245f5f57ec0SBarry Smith 224687497f52SBarry Smith Developers Note: 224787497f52SBarry Smith We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 22482f18eb33SBarry Smith 22492f18eb33SBarry Smith Level: advanced 22502f18eb33SBarry Smith 2251db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22522f18eb33SBarry Smith @*/ 2253d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) 2254d71ae5a4SJacob Faibussowitsch { 2255bafee8b4SSatish Balay PetscInt64 r; 22562f18eb33SBarry Smith 22572f18eb33SBarry Smith PetscFunctionBegin; 2258bafee8b4SSatish Balay r = PetscInt64Mult(a, b); 22592f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22602c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 22612f18eb33SBarry Smith #endif 2262f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2263f91af8c7SBarry Smith PetscFunctionReturn(0); 2264f91af8c7SBarry Smith } 2265f91af8c7SBarry Smith 2266f91af8c7SBarry Smith /*@C 2267f91af8c7SBarry Smith 226887497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 2269f91af8c7SBarry Smith 2270f91af8c7SBarry Smith Not Collective 2271f91af8c7SBarry Smith 2272d8d19677SJose E. Roman Input Parameters: 227387497f52SBarry Smith + a - the `PetscInt` value 2274f91af8c7SBarry Smith - b - the second value 2275f91af8c7SBarry Smith 2276d8d19677SJose E. Roman Output Parameter: 227787497f52SBarry Smith . c - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 2278f91af8c7SBarry Smith 227987497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64` 228087497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 2281f91af8c7SBarry Smith 2282f5f57ec0SBarry Smith Not available from Fortran 2283f5f57ec0SBarry Smith 2284f91af8c7SBarry Smith Level: advanced 2285f91af8c7SBarry Smith 2286db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2287f91af8c7SBarry Smith @*/ 2288d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) 2289d71ae5a4SJacob Faibussowitsch { 2290bafee8b4SSatish Balay PetscInt64 r; 2291f91af8c7SBarry Smith 2292f91af8c7SBarry Smith PetscFunctionBegin; 2293bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2294f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22952c71b3e2SJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2296f91af8c7SBarry Smith #endif 2297f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 22982f18eb33SBarry Smith PetscFunctionReturn(0); 22992f18eb33SBarry Smith } 2300c5df96a5SBarry Smith 2301d382aafbSBarry Smith /* 23022981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2303d382aafbSBarry Smith */ 2304d382aafbSBarry Smith #if defined(hz) 2305d382aafbSBarry Smith #undef hz 2306d382aafbSBarry Smith #endif 2307d382aafbSBarry Smith 230815a5570dSLisandro Dalcin #include <limits.h> 230915a5570dSLisandro Dalcin 231015a5570dSLisandro Dalcin /* The number of bits in a byte */ 231115a5570dSLisandro Dalcin 231215a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 231315a5570dSLisandro Dalcin 2314d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2315d382aafbSBarry Smith #include <sys/types.h> 2316d382aafbSBarry Smith #endif 2317d382aafbSBarry Smith 2318d382aafbSBarry Smith /*MC 2319d382aafbSBarry Smith 232066d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 232166d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 232266d79e26SBarry Smith 23236274ba02SSatish Balay The current PETSc version and the API for accessing it are defined in <A HREF="PETSC_DOC_OUT_ROOT_PLACEHOLDER/include/petscversion.h.html">include/petscverson.html</A> 232466d79e26SBarry Smith 232566d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 232666d79e26SBarry Smith 232766d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 232866d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 232966d79e26SBarry Smith 233066d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 233166d79e26SBarry Smith 233266d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 233366d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 233466d79e26SBarry Smith version number (x.y.z). 233566d79e26SBarry Smith 233687497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 233766d79e26SBarry Smith 233887497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 233966d79e26SBarry Smith 234087497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 234166d79e26SBarry Smith 234287497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 234366d79e26SBarry Smith 234487497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 234566d79e26SBarry Smith 2346cbc12506SBarry Smith Level: intermediate 234766d79e26SBarry Smith 234866d79e26SBarry Smith M*/ 234966d79e26SBarry Smith 2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 235627710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23575f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2358d382aafbSBarry Smith 23596a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 236062e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortedInt64(PetscInt, const PetscInt64[], PetscBool *); 23616a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 23626a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 236462e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortInt64(PetscInt, PetscInt64[]); 236562e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortCount(PetscInt, PetscCount[]); 2366ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 236722ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2368b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2370f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 237160e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2372d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2376981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 23776c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2378981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 237917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 238017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 23825569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 238417df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 238639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2388745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 238939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 23936c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 23946c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2395e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2396ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2397ce605777SToby Isaac 23984d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2399676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2400676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2401676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 24024d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2403676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2404676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2405676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2406676f2a66SJacob Faibussowitsch 2407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2409d382aafbSBarry Smith 241076bdecfbSBarry Smith /*J 2411d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2412d382aafbSBarry Smith 2413d382aafbSBarry Smith Level: beginner 2414d382aafbSBarry Smith 2415e28ce29aSPatrick Sanan Notes: 241687497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 241725ccb61fSToby Isaac with the option --download-sprng or --download-random123 2418d382aafbSBarry Smith 2419db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 242076bdecfbSBarry Smith J*/ 242119fd82e9SBarry Smith typedef const char *PetscRandomType; 2422d382aafbSBarry Smith #define PETSCRAND "rand" 2423d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2424d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2425c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 242625ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2427808ba619SStefano Zampini #define PETSCCURAND "curand" 2428d382aafbSBarry Smith 2429d382aafbSBarry Smith /* Logging support */ 2430014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2431d382aafbSBarry Smith 2432607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2433d382aafbSBarry Smith 2434d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2435140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2436d382aafbSBarry Smith 2437bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 243819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 244019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2441fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2443d382aafbSBarry Smith 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2447808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2448808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2450014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2455d382aafbSBarry Smith 2456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 246397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24648a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 246597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2466d382aafbSBarry Smith 2467d71ae5a4SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) 2468d71ae5a4SJacob Faibussowitsch { 24699371c9d4SSatish Balay long _petsc_v = 1; 24709371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 24719371c9d4SSatish Balay } 247230815ce0SLisandro Dalcin 24739860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 24749860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2475f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2476f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2484c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2485e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2486c891a504SStefano Zampini #endif 2487d382aafbSBarry Smith 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2491d382aafbSBarry Smith 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24982a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2499d382aafbSBarry Smith 2500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 250593d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 250693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 250793d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2508d382aafbSBarry Smith 25096145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25106145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 25116145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 25126145cd65SJed Brown 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2514d382aafbSBarry Smith 2515ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2516ce94432eSBarry Smith 251745487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 251845487dadSJed Brown 2519d382aafbSBarry Smith struct _n_PetscSubcomm { 2520d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2521d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2522306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 252345487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 252445487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2525708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 252645487dadSJed Brown PetscSubcommType type; 2527e5acf8a4SHong Zhang char *subcommprefix; 2528d382aafbSBarry Smith }; 2529d382aafbSBarry Smith 2530d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) 2531d71ae5a4SJacob Faibussowitsch { 25329371c9d4SSatish Balay return scomm->parent; 25339371c9d4SSatish Balay } 2534d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) 2535d71ae5a4SJacob Faibussowitsch { 25369371c9d4SSatish Balay return scomm->child; 25379371c9d4SSatish Balay } 2538d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) 2539d71ae5a4SJacob Faibussowitsch { 25409371c9d4SSatish Balay return scomm->dupparent; 25419371c9d4SSatish Balay } 2542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 254665d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2547053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2548f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2549e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2550a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2551a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2552a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2553d382aafbSBarry Smith 25549962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 25559962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 25569962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 25579962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 25589962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 25599962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25609962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 25619962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 25629962606eSBarry Smith 25635e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25645f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 25655f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25665f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25675f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 25685e71baefSBarry Smith 2569a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2570a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2571a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2572a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2573a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2574a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2575a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2576a32e93adSJunchao Zhang 257713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 25780f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 257913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2580137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2581137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2582137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 258313e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 258413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 25850f453b92SJed Brown 2586471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2587471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2588471ecdacSJed Brown * possible. */ 2589d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) 2590d71ae5a4SJacob Faibussowitsch { 25919371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 25929371c9d4SSatish Balay } 2593d382aafbSBarry Smith 25949de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25959de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 25969de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 25979de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 25989de0f6ecSBarry Smith 2599ace2fbaeSBarry Smith #include <stdarg.h> 2600ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2601ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2602ace2fbaeSBarry Smith 2603268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2604fbfcfee5SBarry Smith 26051f817a21SBarry Smith /*@C 26061f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26071f817a21SBarry Smith 260887497f52SBarry Smith Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed 26091f817a21SBarry Smith 26101f817a21SBarry Smith Input Parameters: 26111f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 261287497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 26131f817a21SBarry Smith 26143c7db156SBarry Smith Options Database: Key 26153c7db156SBarry Smith . -citations [filename] - print out the bibtex entries for the given computation 26163c7db156SBarry Smith 2617850545d0SSatish Balay Level: intermediate 2618850545d0SSatish Balay 26193c7db156SBarry Smith Fortran Note: 2620f5f57ec0SBarry Smith Not available from Fortran 2621f5f57ec0SBarry Smith 26221f817a21SBarry Smith @*/ 2623d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) 2624d71ae5a4SJacob Faibussowitsch { 2625dff31646SBarry Smith size_t len; 2626dff31646SBarry Smith char *vstring; 2627dff31646SBarry Smith 26281f817a21SBarry Smith PetscFunctionBegin; 26298d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 26309566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 26319566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 26329566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2633dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26341f817a21SBarry Smith PetscFunctionReturn(0); 2635dff31646SBarry Smith } 2636dff31646SBarry Smith 2637d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char[], char[], size_t c); 2638fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2639fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2640f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2641fe278a28SBarry Smith 2642f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2643f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 2644b967cddfSBarry Smith 26459f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 26469f4d3c52SBarry Smith 264704102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm, const char[], const char[], PetscBool *); 2648763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm, const char[], const char[], PetscBool *); 2649dff31646SBarry Smith 265068e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 26515dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2652d382aafbSBarry Smith 2653b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2654d71ae5a4SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2655d71ae5a4SJacob Faibussowitsch { 2656df05ca09SBarry Smith unsigned int c, hash = 5381; 2657df05ca09SBarry Smith 2658503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2659df05ca09SBarry Smith return hash; 2660df05ca09SBarry Smith } 266177a5e07dSBarry Smith 266277a5e07dSBarry Smith /*MC 266387497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 266487497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 266587497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 266677a5e07dSBarry Smith 2667d083f849SBarry Smith Collective 266877a5e07dSBarry Smith 266977a5e07dSBarry Smith Synopsis: 267077a5e07dSBarry Smith #include <petscsys.h> 267177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 267277a5e07dSBarry Smith 267377a5e07dSBarry Smith Input Parameters: 2674df05ca09SBarry Smith + a - pointer to the input data to be reduced 2675df05ca09SBarry Smith . c - the number of MPI data items in a and b 267687497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 267787497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2678df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 267977a5e07dSBarry Smith 268077a5e07dSBarry Smith Output Parameter: 2681df05ca09SBarry Smith . b - the reduced values 268277a5e07dSBarry Smith 2683e28ce29aSPatrick Sanan Notes: 268487497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 268577a5e07dSBarry Smith 2686df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2687df05ca09SBarry Smith 268887497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2689df05ca09SBarry Smith 269077a5e07dSBarry Smith Level: developer 269177a5e07dSBarry Smith 2692db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 269377a5e07dSBarry Smith M*/ 26949371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 26959371c9d4SSatish Balay PetscMacroReturnStandard(PetscMPIInt a_b1[6], a_b2[6]; int _mpiu_allreduce_c_int = (int)c; a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)));) 2696b2566f29SBarry Smith #else 26971c2dc1cbSBarry Smith #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)))) 2698b2566f29SBarry Smith #endif 2699b2566f29SBarry Smith 2700b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27018198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 27028198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 27032f065d89SBarry Smith #endif 27048198064fSBarry Smith 2705cd88fca5SStefano Zampini /* this is a vile hack */ 2706cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 27079371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2708cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2709cd88fca5SStefano Zampini #endif 2710961fb248SStefano Zampini #endif 2711cd88fca5SStefano Zampini 271212801b39SBarry Smith /* 271360fbe2beSVaclav Hapla List of external packages and queries on it 271460fbe2beSVaclav Hapla */ 271560fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 271660fbe2beSVaclav Hapla 2717a52b435bSMark Adams /* 2718a52b435bSMark Adams OpenMP support 2719a52b435bSMark Adams */ 2720a52b435bSMark Adams #if defined(_OPENMP) 2721a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2722a52b435bSMark Adams #else // no OpenMP so no threads 2723a52b435bSMark Adams #define PetscPragmaOMP(...) 2724a52b435bSMark Adams #endif 2725a52b435bSMark Adams 2726f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2727f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2728f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2729f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 2730d382aafbSBarry Smith #endif 2731