1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11d382aafbSBarry Smith in the conf/variables definition of PETSC_INCLUDE 12d382aafbSBarry Smith */ 13d382aafbSBarry Smith #include "petscconf.h" 14d382aafbSBarry Smith #include "petscfix.h" 15d382aafbSBarry Smith 16d382aafbSBarry Smith /* ========================================================================== */ 17d382aafbSBarry Smith /* 18d382aafbSBarry Smith This facilitates using C version of PETSc from C++ and 19*e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 20d382aafbSBarry Smith */ 21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 23d382aafbSBarry Smith #endif 24d382aafbSBarry Smith 25d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 26d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" { 27d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END } 28d382aafbSBarry Smith #else 29d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN 30d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END 31d382aafbSBarry Smith #endif 32d382aafbSBarry Smith /* ========================================================================== */ 33d382aafbSBarry Smith /* 34d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 35d382aafbSBarry Smith Web page 36d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 37d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 38d382aafbSBarry Smith src/docs/website/index.html. 39d382aafbSBarry Smith */ 40d382aafbSBarry Smith #include "petscversion.h" 41d382aafbSBarry Smith #define PETSC_AUTHOR_INFO "\ 42d382aafbSBarry Smith The PETSc Team\n\ 43d382aafbSBarry Smith petsc-maint@mcs.anl.gov\n\ 44d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/\n" 45d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 46d382aafbSBarry Smith #define PetscGetVersion(version,len) (PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, ", \ 47d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 48d382aafbSBarry Smith PETSC_VERSION_PATCH),PetscStrcat(version,PETSC_VERSION_PATCH_DATE)) 49d382aafbSBarry Smith #else 50d382aafbSBarry Smith #define PetscGetVersion(version,len) (PetscSNPrintf(version,len,"Petsc Development"), \ 51d382aafbSBarry Smith PetscStrcat(version," HG revision: "),PetscStrcat(version,PETSC_VERSION_HG), \ 52d382aafbSBarry Smith PetscStrcat(version," HG Date: "),PetscStrcat(version,PETSC_VERSION_DATE_HG)) 53d382aafbSBarry Smith #endif 54d382aafbSBarry Smith 55d382aafbSBarry Smith /*MC 56d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 57d382aafbSBarry Smith 58d382aafbSBarry Smith Input Parameter: 59d382aafbSBarry Smith . len - length of the string 60d382aafbSBarry Smith 61d382aafbSBarry Smith Output Parameter: 62d382aafbSBarry Smith . version - version string 63d382aafbSBarry Smith 64d382aafbSBarry Smith Level: developer 65d382aafbSBarry Smith 66d382aafbSBarry Smith Usage: 67d382aafbSBarry Smith char version[256]; 68d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 69d382aafbSBarry Smith 70d382aafbSBarry Smith Fortran Note: 71d382aafbSBarry Smith This routine is not supported in Fortran. 72d382aafbSBarry Smith 73d382aafbSBarry Smith .seealso: PetscGetProgramName() 74d382aafbSBarry Smith 75d382aafbSBarry Smith M*/ 76d382aafbSBarry Smith 77d382aafbSBarry Smith /* ========================================================================== */ 78d382aafbSBarry Smith 79d382aafbSBarry Smith /* 80d382aafbSBarry Smith Currently cannot check formatting for PETSc print statements because we have our 81d382aafbSBarry Smith own format %D and %G 82d382aafbSBarry Smith */ 83d382aafbSBarry Smith #undef PETSC_PRINTF_FORMAT_CHECK 84d382aafbSBarry Smith #define PETSC_PRINTF_FORMAT_CHECK(a,b) 85d382aafbSBarry Smith #undef PETSC_FPRINTF_FORMAT_CHECK 86d382aafbSBarry Smith #define PETSC_FPRINTF_FORMAT_CHECK(a,b) 87d382aafbSBarry Smith 88d382aafbSBarry Smith /* 89*e2e64c6bSBarry Smith Fixes for ./configure time choices which impact our interface. Currently only 90d382aafbSBarry Smith calling conventions and extra compiler checking falls under this category. 91d382aafbSBarry Smith */ 92d382aafbSBarry Smith #if !defined(PETSC_STDCALL) 93d382aafbSBarry Smith #define PETSC_STDCALL 94d382aafbSBarry Smith #endif 95d382aafbSBarry Smith #if !defined(PETSC_TEMPLATE) 96d382aafbSBarry Smith #define PETSC_TEMPLATE 97d382aafbSBarry Smith #endif 98d382aafbSBarry Smith #if !defined(PETSC_HAVE_DLL_EXPORT) 99d382aafbSBarry Smith #define PETSC_DLL_EXPORT 100d382aafbSBarry Smith #define PETSC_DLL_IMPORT 101d382aafbSBarry Smith #endif 102d382aafbSBarry Smith #if !defined(PETSC_DLLEXPORT) 103d382aafbSBarry Smith #define PETSC_DLLEXPORT 104d382aafbSBarry Smith #endif 105d382aafbSBarry Smith #if !defined(PETSCVEC_DLLEXPORT) 106d382aafbSBarry Smith #define PETSCVEC_DLLEXPORT 107d382aafbSBarry Smith #endif 108d382aafbSBarry Smith #if !defined(PETSCMAT_DLLEXPORT) 109d382aafbSBarry Smith #define PETSCMAT_DLLEXPORT 110d382aafbSBarry Smith #endif 111d382aafbSBarry Smith #if !defined(PETSCDM_DLLEXPORT) 112d382aafbSBarry Smith #define PETSCDM_DLLEXPORT 113d382aafbSBarry Smith #endif 114d382aafbSBarry Smith #if !defined(PETSCKSP_DLLEXPORT) 115d382aafbSBarry Smith #define PETSCKSP_DLLEXPORT 116d382aafbSBarry Smith #endif 117d382aafbSBarry Smith #if !defined(PETSCSNES_DLLEXPORT) 118d382aafbSBarry Smith #define PETSCSNES_DLLEXPORT 119d382aafbSBarry Smith #endif 120d382aafbSBarry Smith #if !defined(PETSCTS_DLLEXPORT) 121d382aafbSBarry Smith #define PETSCTS_DLLEXPORT 122d382aafbSBarry Smith #endif 123d382aafbSBarry Smith #if !defined(PETSCFORTRAN_DLLEXPORT) 124d382aafbSBarry Smith #define PETSCFORTRAN_DLLEXPORT 125d382aafbSBarry Smith #endif 126d382aafbSBarry Smith /* ========================================================================== */ 127d382aafbSBarry Smith 128d382aafbSBarry Smith /* 129d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 130d382aafbSBarry Smith 131d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 132d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 133d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 134d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 135d382aafbSBarry Smith mpicxx.h directly in their code 136d382aafbSBarry Smith */ 137d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 138d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 139d382aafbSBarry Smith #include "mpi.h" 14065013866SBarry Smith 141d382aafbSBarry Smith /* 142d382aafbSBarry Smith Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 143d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 144d382aafbSBarry Smith 145d382aafbSBarry Smith The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense. 146d382aafbSBarry Smith */ 147d382aafbSBarry Smith #include <stdio.h> 148d382aafbSBarry Smith 149d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 150d382aafbSBarry Smith #if !defined(MPIAPI) 151d382aafbSBarry Smith #define MPIAPI 152d382aafbSBarry Smith #endif 153d382aafbSBarry Smith 154d382aafbSBarry Smith /*MC 155d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 156d382aafbSBarry Smith 157d382aafbSBarry Smith Level: beginner 158d382aafbSBarry Smith 159d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 160d382aafbSBarry Smith M*/ 161d382aafbSBarry Smith typedef int PetscErrorCode; 162d382aafbSBarry Smith 163d382aafbSBarry Smith /*MC 164d382aafbSBarry Smith 1650700a824SBarry Smith PetscClassId - A unique id used to identify each PETSc object. 166d382aafbSBarry Smith (internal integer in the data structure used for error 167d382aafbSBarry Smith checking). These are all defined by an offset from the lowest 1680700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 169d382aafbSBarry Smith 170d382aafbSBarry Smith Level: advanced 171d382aafbSBarry Smith 1720700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 173d382aafbSBarry Smith M*/ 1740700a824SBarry Smith typedef int PetscClassId; 175d382aafbSBarry Smith 176d382aafbSBarry Smith /*MC 177c60ec953SBarry Smith PetscLogEvent - id used to identify PETSc or user events which timed portions (blocks of executable) 178c60ec953SBarry Smith code. 179d382aafbSBarry Smith 180d382aafbSBarry Smith Level: intermediate 181d382aafbSBarry Smith 182d382aafbSBarry Smith .seealso: PetscLogEventRegister(), PetscLogEventBegin(), PetscLogEventEnd(), PetscLogStage 183d382aafbSBarry Smith M*/ 184d382aafbSBarry Smith typedef int PetscLogEvent; 185d382aafbSBarry Smith 186d382aafbSBarry Smith /*MC 187c60ec953SBarry Smith PetscLogStage - id used to identify user stages (phases, sections) of runs - for logging 188d382aafbSBarry Smith 189d382aafbSBarry Smith Level: intermediate 190d382aafbSBarry Smith 191d382aafbSBarry Smith .seealso: PetscLogStageRegister(), PetscLogStageBegin(), PetscLogStageEnd(), PetscLogEvent 192d382aafbSBarry Smith M*/ 193d382aafbSBarry Smith typedef int PetscLogStage; 194d382aafbSBarry Smith 195d382aafbSBarry Smith /*MC 196d382aafbSBarry Smith PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 197d382aafbSBarry Smith 198d382aafbSBarry Smith Level: intermediate 199d382aafbSBarry Smith 200d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2013b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 2023b2a8c54SBarry Smith (except on very rare BLAS/LAPACK implementations that support 64 bit integers). 2033b2a8c54SBarry Smith 2043b2a8c54SBarry Smith PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2053b2a8c54SBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 2063b2a8c54SBarry Smith 2073b2a8c54SBarry Smith PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2083b2a8c54SBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 209d382aafbSBarry Smith 210d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt 211d382aafbSBarry Smith 212d382aafbSBarry Smith M*/ 213d382aafbSBarry Smith typedef int PetscBLASInt; 214d382aafbSBarry Smith 215d382aafbSBarry Smith /*MC 216d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 217d382aafbSBarry Smith 218d382aafbSBarry Smith Level: intermediate 219d382aafbSBarry Smith 220d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 2213b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 222d382aafbSBarry Smith 2233b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 224d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 225d382aafbSBarry Smith 2263b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 227d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 228d382aafbSBarry Smith 229d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 230d382aafbSBarry Smith 231d382aafbSBarry Smith M*/ 232d382aafbSBarry Smith typedef int PetscMPIInt; 233d382aafbSBarry Smith 234d382aafbSBarry Smith /*MC 235d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 236d382aafbSBarry Smith 237d382aafbSBarry Smith Level: intermediate 238d382aafbSBarry Smith 239d382aafbSBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 240d382aafbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE. 241d382aafbSBarry Smith 242d382aafbSBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 243d382aafbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE 244d382aafbSBarry Smith 245d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 246d382aafbSBarry Smith M*/ 247d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 248d382aafbSBarry Smith 249d382aafbSBarry Smith /*MC 250d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 2513b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 252d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 253d382aafbSBarry Smith 254d382aafbSBarry Smith Level: intermediate 255d382aafbSBarry Smith 256d382aafbSBarry Smith 257d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 258d382aafbSBarry Smith M*/ 259d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 260d382aafbSBarry Smith typedef long long PetscInt; 261d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 262d382aafbSBarry Smith #else 263d382aafbSBarry Smith typedef int PetscInt; 264d382aafbSBarry Smith #define MPIU_INT MPI_INT 265d382aafbSBarry Smith #endif 266d382aafbSBarry Smith 267d382aafbSBarry Smith /* add in MPIU type for size_t */ 268d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 269d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 270d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 271d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 272d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 273d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 274d382aafbSBarry Smith #else 275d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 276d382aafbSBarry Smith #endif 277d382aafbSBarry Smith 278d382aafbSBarry Smith 279d382aafbSBarry Smith /* 280d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 281d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 282d382aafbSBarry Smith */ 283d382aafbSBarry Smith 284d382aafbSBarry Smith extern FILE* PETSC_STDOUT; 285d382aafbSBarry Smith 286d382aafbSBarry Smith /* 287d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 288d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 289d382aafbSBarry Smith */ 290d382aafbSBarry Smith extern FILE* PETSC_STDERR; 291d382aafbSBarry Smith 292d382aafbSBarry Smith /* 293d382aafbSBarry Smith PETSC_ZOPEFD is used to send data to the PETSc webpage. It can be used 294d382aafbSBarry Smith in conjunction with PETSC_STDOUT, or by itself. 295d382aafbSBarry Smith */ 296d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD; 297d382aafbSBarry Smith 298d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 299d382aafbSBarry Smith /*MC 300d382aafbSBarry Smith PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of 301d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 302d382aafbSBarry Smith 303d382aafbSBarry Smith Synopsis: 304d382aafbSBarry Smith PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function)) 305d382aafbSBarry Smith 306eca87e8dSBarry Smith Not collective 307eca87e8dSBarry Smith 308d382aafbSBarry Smith Level: developer 309d382aafbSBarry Smith 310d382aafbSBarry Smith Example: 311d382aafbSBarry Smith PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine 312d382aafbSBarry Smith PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r) 313d382aafbSBarry Smith 314d382aafbSBarry Smith .seealso: PetscPolymorphicFunction() 315d382aafbSBarry Smith 316d382aafbSBarry Smith M*/ 317d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;} 318d382aafbSBarry Smith 319d382aafbSBarry Smith /*MC 320d382aafbSBarry Smith PetscPolymorphicScalar - allows defining a C++ polymorphic version of 321d382aafbSBarry Smith a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument 322d382aafbSBarry Smith 323d382aafbSBarry Smith Synopsis: 324d382aafbSBarry Smith PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function)) 325d382aafbSBarry Smith 326eca87e8dSBarry Smith Not collective 327eca87e8dSBarry Smith 328d382aafbSBarry Smith Level: developer 329d382aafbSBarry Smith 330d382aafbSBarry Smith Example: 331d382aafbSBarry Smith PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine 332d382aafbSBarry Smith PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);} 333d382aafbSBarry Smith 334d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine() 335d382aafbSBarry Smith 336d382aafbSBarry Smith M*/ 337d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;} 338d382aafbSBarry Smith 339d382aafbSBarry Smith /*MC 340d382aafbSBarry Smith PetscPolymorphicFunction - allows defining a C++ polymorphic version of 341d382aafbSBarry Smith a PETSc function that remove certain optional arguments for a simplier user interface 342d382aafbSBarry Smith and returns the computed value (istead of an error code) 343d382aafbSBarry Smith 344d382aafbSBarry Smith Synopsis: 345d382aafbSBarry Smith PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name) 346d382aafbSBarry Smith 347eca87e8dSBarry Smith Not collective 348eca87e8dSBarry Smith 349d382aafbSBarry Smith Level: developer 350d382aafbSBarry Smith 351d382aafbSBarry Smith Example: 352d382aafbSBarry Smith PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine 353d382aafbSBarry Smith PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;} 354d382aafbSBarry Smith 355d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine() 356d382aafbSBarry Smith 357d382aafbSBarry Smith M*/ 358d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;} 359d382aafbSBarry Smith 360d382aafbSBarry Smith #else 361d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) 362d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) 363d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) 364d382aafbSBarry Smith #endif 365d382aafbSBarry Smith 366d382aafbSBarry Smith /*MC 367d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 368d382aafbSBarry Smith 369d382aafbSBarry Smith Synopsis: 370d382aafbSBarry Smith PetscTruth PetscUnlikely(PetscTruth cond) 371d382aafbSBarry Smith 372eca87e8dSBarry Smith Not Collective 373eca87e8dSBarry Smith 374d382aafbSBarry Smith Input Parameters: 375d382aafbSBarry Smith . cond - condition or expression 376d382aafbSBarry Smith 377d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 378d382aafbSBarry Smith branch is unlikely. 379d382aafbSBarry Smith 380d382aafbSBarry Smith Level: advanced 381d382aafbSBarry Smith 382d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 383d382aafbSBarry Smith M*/ 384d382aafbSBarry Smith 385d382aafbSBarry Smith /*MC 386d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 387d382aafbSBarry Smith 388d382aafbSBarry Smith Synopsis: 389d382aafbSBarry Smith PetscTruth PetscUnlikely(PetscTruth cond) 390d382aafbSBarry Smith 391eca87e8dSBarry Smith Not Collective 392eca87e8dSBarry Smith 393d382aafbSBarry Smith Input Parameters: 394d382aafbSBarry Smith . cond - condition or expression 395d382aafbSBarry Smith 396d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 397d382aafbSBarry Smith branch is likely. 398d382aafbSBarry Smith 399d382aafbSBarry Smith Level: advanced 400d382aafbSBarry Smith 401d382aafbSBarry Smith .seealso: PetscUnlikely() 402d382aafbSBarry Smith M*/ 403d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 404d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 405d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 406d382aafbSBarry Smith #else 407d382aafbSBarry Smith # define PetscUnlikely(cond) cond 408d382aafbSBarry Smith # define PetscLikely(cond) cond 409d382aafbSBarry Smith #endif 410d382aafbSBarry Smith 411d382aafbSBarry Smith /* 412d382aafbSBarry Smith Extern indicates a PETSc function defined elsewhere 413d382aafbSBarry Smith */ 414d382aafbSBarry Smith #if !defined(EXTERN) 415d382aafbSBarry Smith #define EXTERN extern 416d382aafbSBarry Smith #endif 417d382aafbSBarry Smith 418d382aafbSBarry Smith /* 419d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 420d382aafbSBarry Smith */ 421d382aafbSBarry Smith #include "petscmath.h" 422d382aafbSBarry Smith 423d382aafbSBarry Smith /* 424d382aafbSBarry Smith Declare extern C stuff after including external header files 425d382aafbSBarry Smith */ 426d382aafbSBarry Smith 427d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN 428d382aafbSBarry Smith 429d382aafbSBarry Smith /* 430d382aafbSBarry Smith Basic PETSc constants 431d382aafbSBarry Smith */ 432d382aafbSBarry Smith 433d382aafbSBarry Smith /*E 434d382aafbSBarry Smith PetscTruth - Logical variable. Actually an integer 435d382aafbSBarry Smith 436d382aafbSBarry Smith Level: beginner 437d382aafbSBarry Smith 438d382aafbSBarry Smith E*/ 439d382aafbSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscTruth; 440d382aafbSBarry Smith extern const char *PetscTruths[]; 441d382aafbSBarry Smith 442d382aafbSBarry Smith /*MC 443d382aafbSBarry Smith PETSC_FALSE - False value of PetscTruth 444d382aafbSBarry Smith 445d382aafbSBarry Smith Level: beginner 446d382aafbSBarry Smith 447d382aafbSBarry Smith Note: Zero integer 448d382aafbSBarry Smith 449d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE 450d382aafbSBarry Smith M*/ 451d382aafbSBarry Smith 452d382aafbSBarry Smith /*MC 453d382aafbSBarry Smith PETSC_TRUE - True value of PetscTruth 454d382aafbSBarry Smith 455d382aafbSBarry Smith Level: beginner 456d382aafbSBarry Smith 457d382aafbSBarry Smith Note: Nonzero integer 458d382aafbSBarry Smith 459d382aafbSBarry Smith .seealso: PetscTruth, PETSC_FALSE 460d382aafbSBarry Smith M*/ 461d382aafbSBarry Smith 462d382aafbSBarry Smith /*MC 463d382aafbSBarry Smith PETSC_YES - Alias for PETSC_TRUE 464d382aafbSBarry Smith 465d382aafbSBarry Smith Level: beginner 466d382aafbSBarry Smith 467d382aafbSBarry Smith Note: Zero integer 468d382aafbSBarry Smith 469d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE, PETSC_FALSE, PETSC_NO 470d382aafbSBarry Smith M*/ 471d382aafbSBarry Smith #define PETSC_YES PETSC_TRUE 472d382aafbSBarry Smith 473d382aafbSBarry Smith /*MC 474d382aafbSBarry Smith PETSC_NO - Alias for PETSC_FALSE 475d382aafbSBarry Smith 476d382aafbSBarry Smith Level: beginner 477d382aafbSBarry Smith 478d382aafbSBarry Smith Note: Nonzero integer 479d382aafbSBarry Smith 480d382aafbSBarry Smith .seealso: PetscTruth, PETSC_TRUE, PETSC_FALSE, PETSC_YES 481d382aafbSBarry Smith M*/ 482d382aafbSBarry Smith #define PETSC_NO PETSC_FALSE 483d382aafbSBarry Smith 484d382aafbSBarry Smith /*MC 485d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 486d382aafbSBarry Smith 487d382aafbSBarry Smith Level: beginner 488d382aafbSBarry Smith 489d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 490d382aafbSBarry Smith some default 491d382aafbSBarry Smith 492d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 493d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 494d382aafbSBarry Smith 495d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 496d382aafbSBarry Smith 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PETSC_NULL 0 499d382aafbSBarry Smith 500d382aafbSBarry Smith /*MC 501d382aafbSBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 502d382aafbSBarry Smith where you wish PETSc to use the default. 503d382aafbSBarry Smith 504d382aafbSBarry Smith Level: beginner 505d382aafbSBarry Smith 506d382aafbSBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 507d382aafbSBarry Smith 508d382aafbSBarry Smith M*/ 509d382aafbSBarry Smith #define PETSC_DECIDE -1 510d382aafbSBarry Smith 511d382aafbSBarry Smith /*MC 512d382aafbSBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 513d382aafbSBarry Smith where you wish PETSc to use the default. 514d382aafbSBarry Smith 515d382aafbSBarry Smith Level: beginner 516d382aafbSBarry Smith 517d382aafbSBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 518d382aafbSBarry Smith 519d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 520d382aafbSBarry Smith 521d382aafbSBarry Smith M*/ 522d382aafbSBarry Smith #define PETSC_DEFAULT -2 523d382aafbSBarry Smith 524d382aafbSBarry Smith 525d382aafbSBarry Smith /*MC 526d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 527d382aafbSBarry Smith 528d382aafbSBarry Smith Level: beginner 529d382aafbSBarry Smith 530d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 531d382aafbSBarry Smith some default 532d382aafbSBarry Smith 533d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 534d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 535d382aafbSBarry Smith 536d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 537d382aafbSBarry Smith 538d382aafbSBarry Smith M*/ 539d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 540d382aafbSBarry Smith 541d382aafbSBarry Smith /*MC 542d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 543d382aafbSBarry Smith where you wish PETSc to compute the required value. 544d382aafbSBarry Smith 545d382aafbSBarry Smith Level: beginner 546d382aafbSBarry Smith 547d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 548d382aafbSBarry Smith 549d382aafbSBarry Smith M*/ 550d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 551d382aafbSBarry Smith 552d382aafbSBarry Smith /*MC 553d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 554d382aafbSBarry Smith all the processs that PETSc knows about. 555d382aafbSBarry Smith 556d382aafbSBarry Smith Level: beginner 557d382aafbSBarry Smith 558d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 559d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 560d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 561d382aafbSBarry Smith PetscInitialize() 562d382aafbSBarry Smith 563d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 564d382aafbSBarry Smith 565d382aafbSBarry Smith M*/ 566d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD; 567d382aafbSBarry Smith 568d382aafbSBarry Smith /*MC 569d382aafbSBarry Smith PETSC_COMM_SELF - a duplicate of the MPI_COMM_SELF communicator which represents 570d382aafbSBarry Smith the current process 571d382aafbSBarry Smith 572d382aafbSBarry Smith Level: beginner 573d382aafbSBarry Smith 574d382aafbSBarry Smith Notes: PETSC_COMM_SELF and MPI_COMM_SELF are equivalent. 575d382aafbSBarry Smith 576d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 577d382aafbSBarry Smith 578d382aafbSBarry Smith M*/ 579d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 580d382aafbSBarry Smith 581d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscTruth PetscInitializeCalled; 582d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscTruth PetscFinalizeCalled; 583d382aafbSBarry Smith 584d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 585d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 586d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommDestroy(MPI_Comm*); 587d382aafbSBarry Smith 588d382aafbSBarry Smith /*MC 589d382aafbSBarry Smith PetscMalloc - Allocates memory 590d382aafbSBarry Smith 591eca87e8dSBarry Smith Synopsis: 592eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 593eca87e8dSBarry Smith 594eca87e8dSBarry Smith Not Collective 595eca87e8dSBarry Smith 596d382aafbSBarry Smith Input Parameter: 597d382aafbSBarry Smith . m - number of bytes to allocate 598d382aafbSBarry Smith 599d382aafbSBarry Smith Output Parameter: 600d382aafbSBarry Smith . result - memory allocated 601d382aafbSBarry Smith 602d382aafbSBarry Smith Level: beginner 603d382aafbSBarry Smith 604d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 605d382aafbSBarry Smith 606d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 607d382aafbSBarry Smith properly handle not freeing the null pointer. 608d382aafbSBarry Smith 609d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 610d382aafbSBarry Smith 611d382aafbSBarry Smith Concepts: memory allocation 612d382aafbSBarry Smith 613d382aafbSBarry Smith M*/ 614d382aafbSBarry Smith #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,__FUNCT__,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 615d382aafbSBarry Smith 616d382aafbSBarry Smith /*MC 617d382aafbSBarry Smith PetscAddrAlign - Returns an address with PETSC_MEMALIGN alignment 618d382aafbSBarry Smith 619d382aafbSBarry Smith Synopsis: 620d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 621d382aafbSBarry Smith 622eca87e8dSBarry Smith Not Collective 623eca87e8dSBarry Smith 624eca87e8dSBarry Smith Input Parameters: 625eca87e8dSBarry Smith . addr - address to align (any pointer type) 626eca87e8dSBarry Smith 627d382aafbSBarry Smith Level: developer 628d382aafbSBarry Smith 629d382aafbSBarry Smith .seealso: PetscMallocAlign() 630d382aafbSBarry Smith 631d382aafbSBarry Smith Concepts: memory allocation 632d382aafbSBarry Smith M*/ 633d382aafbSBarry Smith #if defined PETSC_UINTPTR_T 634d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 635d382aafbSBarry Smith #else 636d382aafbSBarry Smith # define PetscAddrAlign(a) (void*)(a) 637d382aafbSBarry Smith #endif 638d382aafbSBarry Smith 639d382aafbSBarry Smith /*MC 640d382aafbSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory 641d382aafbSBarry Smith 642eca87e8dSBarry Smith Synopsis: 643eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 644eca87e8dSBarry Smith 645eca87e8dSBarry Smith Not Collective 646eca87e8dSBarry Smith 647d382aafbSBarry Smith Input Parameter: 648d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 649d382aafbSBarry Smith . t1 - type of first memory elements 650d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 651d382aafbSBarry Smith - t2 - type of second memory elements 652d382aafbSBarry Smith 653d382aafbSBarry Smith Output Parameter: 654d382aafbSBarry Smith + r1 - memory allocated in first chunk 655d382aafbSBarry Smith - r2 - memory allocated in second chunk 656d382aafbSBarry Smith 657d382aafbSBarry Smith Level: developer 658d382aafbSBarry Smith 659d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 660d382aafbSBarry Smith 661d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 662d382aafbSBarry Smith 663d382aafbSBarry Smith Concepts: memory allocation 664d382aafbSBarry Smith 665d382aafbSBarry Smith M*/ 666d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 667d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 668d382aafbSBarry Smith #else 6693b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \ 670d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 671d382aafbSBarry Smith #endif 672d382aafbSBarry Smith 673d382aafbSBarry Smith /*MC 674d382aafbSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory 675d382aafbSBarry Smith 676eca87e8dSBarry Smith Synopsis: 677eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 678eca87e8dSBarry Smith 679eca87e8dSBarry Smith Not Collective 680eca87e8dSBarry Smith 681d382aafbSBarry Smith Input Parameter: 682d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 683d382aafbSBarry Smith . t1 - type of first memory elements 684d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 685d382aafbSBarry Smith . t2 - type of second memory elements 686d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 687d382aafbSBarry Smith - t3 - type of third memory elements 688d382aafbSBarry Smith 689d382aafbSBarry Smith Output Parameter: 690d382aafbSBarry Smith + r1 - memory allocated in first chunk 691d382aafbSBarry Smith . r2 - memory allocated in second chunk 692d382aafbSBarry Smith - r3 - memory allocated in third chunk 693d382aafbSBarry Smith 694d382aafbSBarry Smith 695d382aafbSBarry Smith Level: developer 696d382aafbSBarry Smith 697d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 698d382aafbSBarry Smith 699d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 700d382aafbSBarry Smith 701d382aafbSBarry Smith Concepts: memory allocation 702d382aafbSBarry Smith 703d382aafbSBarry Smith M*/ 704d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 705d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 706d382aafbSBarry Smith #else 7073b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 708d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 709d382aafbSBarry Smith #endif 710d382aafbSBarry Smith 711d382aafbSBarry Smith /*MC 712d382aafbSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory 713d382aafbSBarry Smith 714eca87e8dSBarry Smith Synopsis: 715eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 716eca87e8dSBarry Smith 717eca87e8dSBarry Smith Not Collective 718eca87e8dSBarry Smith 719d382aafbSBarry Smith Input Parameter: 720d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 721d382aafbSBarry Smith . t1 - type of first memory elements 722d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 723d382aafbSBarry Smith . t2 - type of second memory elements 724d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 725d382aafbSBarry Smith . t3 - type of third memory elements 726d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 727d382aafbSBarry Smith - t4 - type of fourth memory elements 728d382aafbSBarry Smith 729d382aafbSBarry Smith Output Parameter: 730d382aafbSBarry Smith + r1 - memory allocated in first chunk 731d382aafbSBarry Smith . r2 - memory allocated in second chunk 732d382aafbSBarry Smith . r3 - memory allocated in third chunk 733d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 734d382aafbSBarry Smith 735d382aafbSBarry Smith Level: developer 736d382aafbSBarry Smith 737d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 738d382aafbSBarry Smith 739d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 740d382aafbSBarry Smith 741d382aafbSBarry Smith Concepts: memory allocation 742d382aafbSBarry Smith 743d382aafbSBarry Smith M*/ 744d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 745d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 746d382aafbSBarry Smith #else 747d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 7483b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 749d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 750d382aafbSBarry Smith #endif 751d382aafbSBarry Smith 752d382aafbSBarry Smith /*MC 753d382aafbSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory 754d382aafbSBarry Smith 755eca87e8dSBarry Smith Synopsis: 756eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 757eca87e8dSBarry Smith 758eca87e8dSBarry Smith Not Collective 759eca87e8dSBarry Smith 760d382aafbSBarry Smith Input Parameter: 761d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 762d382aafbSBarry Smith . t1 - type of first memory elements 763d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 764d382aafbSBarry Smith . t2 - type of second memory elements 765d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 766d382aafbSBarry Smith . t3 - type of third memory elements 767d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 768d382aafbSBarry Smith . t4 - type of fourth memory elements 769d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 770d382aafbSBarry Smith - t5 - type of fifth memory elements 771d382aafbSBarry Smith 772d382aafbSBarry Smith Output Parameter: 773d382aafbSBarry Smith + r1 - memory allocated in first chunk 774d382aafbSBarry Smith . r2 - memory allocated in second chunk 775d382aafbSBarry Smith . r3 - memory allocated in third chunk 776d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 777d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 778d382aafbSBarry Smith 779d382aafbSBarry Smith Level: developer 780d382aafbSBarry Smith 781d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 782d382aafbSBarry Smith 783d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 784d382aafbSBarry Smith 785d382aafbSBarry Smith Concepts: memory allocation 786d382aafbSBarry Smith 787d382aafbSBarry Smith M*/ 788d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 789d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 790d382aafbSBarry Smith #else 791d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 7923b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 793d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 794d382aafbSBarry Smith #endif 795d382aafbSBarry Smith 796d382aafbSBarry Smith 797d382aafbSBarry Smith /*MC 798d382aafbSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory 799d382aafbSBarry Smith 800eca87e8dSBarry Smith Synopsis: 801eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 802eca87e8dSBarry Smith 803eca87e8dSBarry Smith Not Collective 804eca87e8dSBarry Smith 805d382aafbSBarry Smith Input Parameter: 806d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 807d382aafbSBarry Smith . t1 - type of first memory elements 808d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 809d382aafbSBarry Smith . t2 - type of second memory elements 810d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 811d382aafbSBarry Smith . t3 - type of third memory elements 812d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 813d382aafbSBarry Smith . t4 - type of fourth memory elements 814d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 815d382aafbSBarry Smith . t5 - type of fifth memory elements 816d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 817d382aafbSBarry Smith - t6 - type of sixth memory elements 818d382aafbSBarry Smith 819d382aafbSBarry Smith Output Parameter: 820d382aafbSBarry Smith + r1 - memory allocated in first chunk 821d382aafbSBarry Smith . r2 - memory allocated in second chunk 822d382aafbSBarry Smith . r3 - memory allocated in third chunk 823d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 824d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 825d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 826d382aafbSBarry Smith 827d382aafbSBarry Smith Level: developer 828d382aafbSBarry Smith 829d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 830d382aafbSBarry Smith 831d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 832d382aafbSBarry Smith 833d382aafbSBarry Smith Concepts: memory allocation 834d382aafbSBarry Smith 835d382aafbSBarry Smith M*/ 836d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 837d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 838d382aafbSBarry Smith #else 839d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 8403b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 841d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 842d382aafbSBarry Smith #endif 843d382aafbSBarry Smith 844d382aafbSBarry Smith /*MC 845d382aafbSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory 846d382aafbSBarry Smith 847eca87e8dSBarry Smith Synopsis: 848eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 849eca87e8dSBarry Smith 850eca87e8dSBarry Smith Not Collective 851eca87e8dSBarry Smith 852d382aafbSBarry Smith Input Parameter: 853d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 854d382aafbSBarry Smith . t1 - type of first memory elements 855d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 856d382aafbSBarry Smith . t2 - type of second memory elements 857d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 858d382aafbSBarry Smith . t3 - type of third memory elements 859d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 860d382aafbSBarry Smith . t4 - type of fourth memory elements 861d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 862d382aafbSBarry Smith . t5 - type of fifth memory elements 863d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 864d382aafbSBarry Smith . t6 - type of sixth memory elements 865d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 866d382aafbSBarry Smith - t7 - type of sixth memory elements 867d382aafbSBarry Smith 868d382aafbSBarry Smith Output Parameter: 869d382aafbSBarry Smith + r1 - memory allocated in first chunk 870d382aafbSBarry Smith . r2 - memory allocated in second chunk 871d382aafbSBarry Smith . r3 - memory allocated in third chunk 872d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 873d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 874d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 875eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 876d382aafbSBarry Smith 877d382aafbSBarry Smith Level: developer 878d382aafbSBarry Smith 879d382aafbSBarry Smith Notes: Memory of first chunk is always allocated at least double aligned 880d382aafbSBarry Smith 881d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 882d382aafbSBarry Smith 883d382aafbSBarry Smith Concepts: memory allocation 884d382aafbSBarry Smith 885d382aafbSBarry Smith M*/ 886d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 887d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 888d382aafbSBarry Smith #else 889d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 8903b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 891d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 892d382aafbSBarry Smith #endif 893d382aafbSBarry Smith 894d382aafbSBarry Smith /*MC 895d382aafbSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! 896d382aafbSBarry Smith 897eca87e8dSBarry Smith Synopsis: 898eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 899eca87e8dSBarry Smith 900eca87e8dSBarry Smith Not Collective 901eca87e8dSBarry Smith 902d382aafbSBarry Smith Input Parameter: 903d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 904d382aafbSBarry Smith 905d382aafbSBarry Smith Output Parameter: 906d382aafbSBarry Smith . result - memory allocated 907d382aafbSBarry Smith 908d382aafbSBarry Smith Level: beginner 909d382aafbSBarry Smith 910d382aafbSBarry Smith .seealso: PetscFree(), PetscMalloc() 911d382aafbSBarry Smith 912d382aafbSBarry Smith Concepts: memory allocation 913d382aafbSBarry Smith 914d382aafbSBarry Smith M*/ 915d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 916d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 917d382aafbSBarry Smith 918d382aafbSBarry Smith /*MC 919d382aafbSBarry Smith PetscFree - Frees memory 920d382aafbSBarry Smith 921eca87e8dSBarry Smith Synopsis: 922eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 923eca87e8dSBarry Smith 924eca87e8dSBarry Smith Not Collective 925eca87e8dSBarry Smith 926d382aafbSBarry Smith Input Parameter: 927d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 928d382aafbSBarry Smith 929d382aafbSBarry Smith 930d382aafbSBarry Smith Level: beginner 931d382aafbSBarry Smith 932d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 933d382aafbSBarry Smith 934d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 935d382aafbSBarry Smith 936d382aafbSBarry Smith Concepts: memory allocation 937d382aafbSBarry Smith 938d382aafbSBarry Smith M*/ 939d382aafbSBarry Smith #define PetscFree(a) ((a) ? ((*PetscTrFree)((void*)(a),__LINE__,__FUNCT__,__FILE__,__SDIR__) || ((a = 0),0)) : 0) 940d382aafbSBarry Smith 941d382aafbSBarry Smith /*MC 942d382aafbSBarry Smith PetscFreeVoid - Frees memory 943d382aafbSBarry Smith 944d382aafbSBarry Smith Synopsis: 945d382aafbSBarry Smith void PetscFreeVoid(void *memory) 946d382aafbSBarry Smith 947eca87e8dSBarry Smith Not Collective 948eca87e8dSBarry Smith 949eca87e8dSBarry Smith Input Parameter: 950eca87e8dSBarry Smith . memory - memory to free 951eca87e8dSBarry Smith 952d382aafbSBarry Smith Level: beginner 953d382aafbSBarry Smith 954d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 955d382aafbSBarry Smith 956d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 957d382aafbSBarry Smith 958d382aafbSBarry Smith Concepts: memory allocation 959d382aafbSBarry Smith 960d382aafbSBarry Smith M*/ 961d382aafbSBarry Smith #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,__FUNCT__,__FILE__,__SDIR__),(a) = 0) 962d382aafbSBarry Smith 963d382aafbSBarry Smith 964d382aafbSBarry Smith /*MC 965d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 966d382aafbSBarry Smith 967eca87e8dSBarry Smith Synopsis: 968eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 969eca87e8dSBarry Smith 970eca87e8dSBarry Smith Not Collective 971eca87e8dSBarry Smith 972d382aafbSBarry Smith Input Parameter: 973d382aafbSBarry Smith + memory1 - memory to free 974d382aafbSBarry Smith - memory2 - 2nd memory to free 975d382aafbSBarry Smith 976d382aafbSBarry Smith Level: developer 977d382aafbSBarry Smith 978d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 979d382aafbSBarry Smith 980d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 981d382aafbSBarry Smith 982d382aafbSBarry Smith Concepts: memory allocation 983d382aafbSBarry Smith 984d382aafbSBarry Smith M*/ 985d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 986d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 987d382aafbSBarry Smith #else 988d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m1)) 989d382aafbSBarry Smith #endif 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 992d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 993d382aafbSBarry Smith 994eca87e8dSBarry Smith Synopsis: 995eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 996eca87e8dSBarry Smith 997eca87e8dSBarry Smith Not Collective 998eca87e8dSBarry Smith 999d382aafbSBarry Smith Input Parameter: 1000d382aafbSBarry Smith + memory1 - memory to free 1001d382aafbSBarry Smith . memory2 - 2nd memory to free 1002d382aafbSBarry Smith - memory3 - 3rd memory to free 1003d382aafbSBarry Smith 1004d382aafbSBarry Smith Level: developer 1005d382aafbSBarry Smith 1006d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1009d382aafbSBarry Smith 1010d382aafbSBarry Smith Concepts: memory allocation 1011d382aafbSBarry Smith 1012d382aafbSBarry Smith M*/ 1013d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1014d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1015d382aafbSBarry Smith #else 1016d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m1)) 1017d382aafbSBarry Smith #endif 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith /*MC 1020d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1021d382aafbSBarry Smith 1022eca87e8dSBarry Smith Synopsis: 1023eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1024eca87e8dSBarry Smith 1025eca87e8dSBarry Smith Not Collective 1026eca87e8dSBarry Smith 1027d382aafbSBarry Smith Input Parameter: 1028d382aafbSBarry Smith + m1 - memory to free 1029d382aafbSBarry Smith . m2 - 2nd memory to free 1030d382aafbSBarry Smith . m3 - 3rd memory to free 1031d382aafbSBarry Smith - m4 - 4th memory to free 1032d382aafbSBarry Smith 1033d382aafbSBarry Smith Level: developer 1034d382aafbSBarry Smith 1035d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1038d382aafbSBarry Smith 1039d382aafbSBarry Smith Concepts: memory allocation 1040d382aafbSBarry Smith 1041d382aafbSBarry Smith M*/ 1042d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1043d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1044d382aafbSBarry Smith #else 1045d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m1)) 1046d382aafbSBarry Smith #endif 1047d382aafbSBarry Smith 1048d382aafbSBarry Smith /*MC 1049d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1050d382aafbSBarry Smith 1051eca87e8dSBarry Smith Synopsis: 1052eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1053eca87e8dSBarry Smith 1054eca87e8dSBarry Smith Not Collective 1055eca87e8dSBarry Smith 1056d382aafbSBarry Smith Input Parameter: 1057d382aafbSBarry Smith + m1 - memory to free 1058d382aafbSBarry Smith . m2 - 2nd memory to free 1059d382aafbSBarry Smith . m3 - 3rd memory to free 1060d382aafbSBarry Smith . m4 - 4th memory to free 1061d382aafbSBarry Smith - m5 - 5th memory to free 1062d382aafbSBarry Smith 1063d382aafbSBarry Smith Level: developer 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 1066d382aafbSBarry Smith 1067d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1068d382aafbSBarry Smith 1069d382aafbSBarry Smith Concepts: memory allocation 1070d382aafbSBarry Smith 1071d382aafbSBarry Smith M*/ 1072d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1073d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1074d382aafbSBarry Smith #else 1075d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m1)) 1076d382aafbSBarry Smith #endif 1077d382aafbSBarry Smith 1078d382aafbSBarry Smith 1079d382aafbSBarry Smith /*MC 1080d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1081d382aafbSBarry Smith 1082eca87e8dSBarry Smith Synopsis: 1083eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1084eca87e8dSBarry Smith 1085eca87e8dSBarry Smith Not Collective 1086eca87e8dSBarry Smith 1087d382aafbSBarry Smith Input Parameter: 1088d382aafbSBarry Smith + m1 - memory to free 1089d382aafbSBarry Smith . m2 - 2nd memory to free 1090d382aafbSBarry Smith . m3 - 3rd memory to free 1091d382aafbSBarry Smith . m4 - 4th memory to free 1092d382aafbSBarry Smith . m5 - 5th memory to free 1093d382aafbSBarry Smith - m6 - 6th memory to free 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith 1096d382aafbSBarry Smith Level: developer 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1099d382aafbSBarry Smith 1100d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1101d382aafbSBarry Smith 1102d382aafbSBarry Smith Concepts: memory allocation 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith M*/ 1105d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1106d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1107d382aafbSBarry Smith #else 1108d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m1)) 1109d382aafbSBarry Smith #endif 1110d382aafbSBarry Smith 1111d382aafbSBarry Smith /*MC 1112d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1113d382aafbSBarry Smith 1114eca87e8dSBarry Smith Synopsis: 1115eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1116eca87e8dSBarry Smith 1117eca87e8dSBarry Smith Not Collective 1118eca87e8dSBarry Smith 1119d382aafbSBarry Smith Input Parameter: 1120d382aafbSBarry Smith + m1 - memory to free 1121d382aafbSBarry Smith . m2 - 2nd memory to free 1122d382aafbSBarry Smith . m3 - 3rd memory to free 1123d382aafbSBarry Smith . m4 - 4th memory to free 1124d382aafbSBarry Smith . m5 - 5th memory to free 1125d382aafbSBarry Smith . m6 - 6th memory to free 1126d382aafbSBarry Smith - m7 - 7th memory to free 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith 1129d382aafbSBarry Smith Level: developer 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1134d382aafbSBarry Smith PetscMalloc7() 1135d382aafbSBarry Smith 1136d382aafbSBarry Smith Concepts: memory allocation 1137d382aafbSBarry Smith 1138d382aafbSBarry Smith M*/ 1139d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1140d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1141d382aafbSBarry Smith #else 1142d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m1)) 1143d382aafbSBarry Smith #endif 1144d382aafbSBarry Smith 1145d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1146d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1147d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1148d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocClear(void); 1149d382aafbSBarry Smith 1150d382aafbSBarry Smith /* 1151d382aafbSBarry Smith Routines for tracing memory corruption/bleeding with default PETSc 1152d382aafbSBarry Smith memory allocation 1153d382aafbSBarry Smith */ 1154d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDump(FILE *); 1155d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDumpLog(FILE *); 1156d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocGetCurrentUsage(PetscLogDouble *); 1157d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocGetMaximumUsage(PetscLogDouble *); 1158d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocDebug(PetscTruth); 1159d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocValidate(int,const char[],const char[],const char[]); 1160d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMallocSetDumpLog(void); 1161d382aafbSBarry Smith 1162d382aafbSBarry Smith 1163d382aafbSBarry Smith /* 1164d382aafbSBarry Smith Variable type where we stash PETSc object pointers in Fortran. 1165d382aafbSBarry Smith On most machines size(pointer) == sizeof(long) - except windows 1166d382aafbSBarry Smith where its sizeof(long long) 1167d382aafbSBarry Smith */ 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith #if (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG) 1170d382aafbSBarry Smith #define PetscFortranAddr long 1171d382aafbSBarry Smith #elif (PETSC_SIZEOF_VOID_P) == (PETSC_SIZEOF_LONG_LONG) 1172d382aafbSBarry Smith #define PetscFortranAddr long long 1173d382aafbSBarry Smith #else 1174d382aafbSBarry Smith #error "Unknown size for PetscFortranAddr! Send us a bugreport at petsc-maint@mcs.anl.gov" 1175d382aafbSBarry Smith #endif 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith /*E 1178d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1179d382aafbSBarry Smith 1180d382aafbSBarry Smith Level: beginner 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1183d382aafbSBarry Smith 1184d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1185d382aafbSBarry Smith PetscDataTypeGetSize() 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith E*/ 1188d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1189d382aafbSBarry Smith PETSC_CHAR = 6,PETSC_LOGICAL = 7,PETSC_ENUM = 8,PETSC_TRUTH=9, PETSC_LONG_DOUBLE = 10, PETSC_QD_DD = 11} PetscDataType; 1190d382aafbSBarry Smith extern const char *PetscDataTypes[]; 1191d382aafbSBarry Smith 1192d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1193d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1194d382aafbSBarry Smith #else 1195d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1196d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 1197d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1198d382aafbSBarry Smith #define PETSC_SCALAR PETSC_LONG_DOUBLE 1199d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1200d382aafbSBarry Smith #define PETSC_SCALAR PETSC_INT 1201d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1202d382aafbSBarry Smith #define PETSC_SCALAR PETSC_QD_DD 1203d382aafbSBarry Smith #else 1204d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1205d382aafbSBarry Smith #endif 1206d382aafbSBarry Smith #endif 1207d382aafbSBarry Smith #if defined(PETSC_USE_SCALAR_SINGLE) 1208d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 1209d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_LONG_DOUBLE) 1210d382aafbSBarry Smith #define PETSC_REAL PETSC_LONG_DOUBLE 1211d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_INT) 1212d382aafbSBarry Smith #define PETSC_REAL PETSC_INT 1213d382aafbSBarry Smith #elif defined(PETSC_USE_SCALAR_QD_DD) 1214d382aafbSBarry Smith #define PETSC_REAL PETSC_QD_DD 1215d382aafbSBarry Smith #else 1216d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1217d382aafbSBarry Smith #endif 1218d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1219d382aafbSBarry Smith 1220d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1221d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1222d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDataTypeGetSize(PetscDataType,size_t*); 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith /* 1225d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1226d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1227d382aafbSBarry Smith functionality and/or error checking. 1228d382aafbSBarry Smith */ 1229d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1230d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemmove(void*,void *,size_t); 1231d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemcmp(const void*,const void*,size_t,PetscTruth *); 1232d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrlen(const char[],size_t*); 1233d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcmp(const char[],const char[],PetscTruth *); 1234d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrgrt(const char[],const char[],PetscTruth *); 1235d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcasecmp(const char[],const char[],PetscTruth*); 1236d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncmp(const char[],const char[],size_t,PetscTruth*); 1237d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcpy(char[],const char[]); 1238d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrcat(char[],const char[]); 1239d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncat(char[],const char[],size_t); 1240d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrncpy(char[],const char[],size_t); 1241d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrchr(const char[],char,char *[]); 1242d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrtolower(char[]); 1243d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrrchr(const char[],char,char *[]); 1244d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrstr(const char[],const char[],char *[]); 1245d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrrstr(const char[],const char[],char *[]); 1246d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrallocpy(const char[],char *[]); 1247d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1248d382aafbSBarry Smith #define PetscStrfree(a) ((a) ? PetscFree(a) : 0) 1249d382aafbSBarry Smith 1250d382aafbSBarry Smith 1251d382aafbSBarry Smith /*S 1252d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1253d382aafbSBarry Smith 1254d382aafbSBarry Smith Level: intermediate 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1257d382aafbSBarry Smith S*/ 1258d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1259d382aafbSBarry Smith 1260d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenCreate(const char[],const char,PetscToken*); 1261d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenFind(PetscToken,char *[]); 1262d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTokenDestroy(PetscToken); 1263d382aafbSBarry Smith 1264d382aafbSBarry Smith /* 1265d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1266d382aafbSBarry Smith */ 1267d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT MPI_Op PetscMaxSum_Op; 1268d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX) 1269d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT MPI_Op MPIU_SUM; 1270d382aafbSBarry Smith #else 1271d382aafbSBarry Smith #define MPIU_SUM MPI_SUM 1272d382aafbSBarry Smith #endif 1273d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith /*S 1276d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1277d382aafbSBarry Smith 1278d382aafbSBarry Smith Level: beginner 1279d382aafbSBarry Smith 1280d382aafbSBarry Smith Note: This is the base class from which all objects appear. 1281d382aafbSBarry Smith 12821890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1283d382aafbSBarry Smith S*/ 1284d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1285d382aafbSBarry Smith 1286d382aafbSBarry Smith /*S 1287d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1288d382aafbSBarry Smith by string name 1289d382aafbSBarry Smith 1290d382aafbSBarry Smith Level: advanced 1291d382aafbSBarry Smith 1292d382aafbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy() 1293d382aafbSBarry Smith S*/ 1294d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith /*E 1297d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1298d382aafbSBarry Smith 1299d382aafbSBarry Smith Level: beginner 1300d382aafbSBarry Smith 1301d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1304d382aafbSBarry Smith 1305d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1306d382aafbSBarry Smith 1307d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1308d382aafbSBarry Smith 1309d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1312d382aafbSBarry Smith E*/ 1313d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1314d382aafbSBarry Smith 1315d382aafbSBarry Smith #include "petscviewer.h" 1316d382aafbSBarry Smith #include "petscoptions.h" 1317d382aafbSBarry Smith 13180700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 13190700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_LARGEST_CLASSID; 13200700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_OBJECT_CLASSID; 13210700a824SBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscClassIdRegister(const char[],PetscClassId *); 1322d382aafbSBarry Smith 1323d382aafbSBarry Smith /* 1324d382aafbSBarry Smith Routines that get memory usage information from the OS 1325d382aafbSBarry Smith */ 1326d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryGetCurrentUsage(PetscLogDouble *); 1327d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryGetMaximumUsage(PetscLogDouble *); 1328d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemorySetGetMaximumUsage(void); 1329d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMemoryShowUsage(PetscViewer,const char[]); 1330d382aafbSBarry Smith 1331d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInfoAllow(PetscTruth,const char []); 1332d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetTime(PetscLogDouble*); 1333d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetCPUTime(PetscLogDouble*); 1334d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSleep(PetscReal); 1335d382aafbSBarry Smith 1336d382aafbSBarry Smith /* 1337d382aafbSBarry Smith Initialization of PETSc 1338d382aafbSBarry Smith */ 1339d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitialize(int*,char***,const char[],const char[]); 1340d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL)) 1341d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitializeNoArguments(void); 1342d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitialized(PetscTruth *); 1343d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFinalized(PetscTruth *); 1344d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFinalize(void); 1345d382aafbSBarry Smith EXTERN PetscErrorCode PetscInitializeFortran(void); 1346d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArgs(int*,char ***); 1347d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArguments(char ***); 1348d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFreeArguments(char **); 1349d382aafbSBarry Smith 1350d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscEnd(void); 1351d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscInitializePackage(const char[]); 1352d382aafbSBarry Smith 1353d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD; 1354d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1355d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPSpawn(PetscMPIInt); 1356d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPFinalize(void); 1357d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1358d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1359d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPFree(MPI_Comm,void*); 1360d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenMPMalloc(MPI_Comm,size_t,void**); 1361d382aafbSBarry Smith 1362d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPythonInitialize(const char[],const char[]); 1363d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPythonFinalize(void); 1364d382aafbSBarry Smith 1365d382aafbSBarry Smith /* 1366d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 1367d382aafbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be 1368d382aafbSBarry Smith C++. 1369d382aafbSBarry Smith */ 1370d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void); 1371d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void); 1372d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1373d382aafbSBarry Smith 1374d382aafbSBarry Smith /* 1375d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1376d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1377d382aafbSBarry Smith */ 1378d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1379d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1380d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1381d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1382d382aafbSBarry Smith } 1383d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1384d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1385d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1386d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1387d382aafbSBarry Smith else {SETERRQ1(PETSC_ERR_SUP,"Cannot locate function %s in object",A);} \ 1388d382aafbSBarry Smith } 1389d382aafbSBarry Smith /* 1390d382aafbSBarry Smith Functions that can act on any PETSc object. 1391d382aafbSBarry Smith */ 1392d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCreate(MPI_Comm,PetscObject*); 13930700a824SBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCreateGeneric(MPI_Comm, PetscClassId, const char [], PetscObject *); 1394d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectDestroy(PetscObject); 1395d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetComm(PetscObject,MPI_Comm *); 13963dd7c473SSatish Balay EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetClassId(PetscObject,PetscClassId *); 1397d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetType(PetscObject,const char []); 1398d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetType(PetscObject,const char *[]); 1399d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetName(PetscObject,const char[]); 1400d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetName(PetscObject,const char*[]); 1401d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetTabLevel(PetscObject,PetscInt); 1402d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetTabLevel(PetscObject,PetscInt*); 1403d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1404d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectReference(PetscObject); 1405d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetReference(PetscObject,PetscInt*); 1406d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectDereference(PetscObject); 1407d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1408d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectView(PetscObject,PetscViewer); 1409d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectCompose(PetscObject,const char[],PetscObject); 1410d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectQuery(PetscObject,const char[],PetscObject *); 1411d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1412d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetFromOptions(PetscObject); 1413d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetUp(PetscObject); 1414d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1415d382aafbSBarry Smith 1416d382aafbSBarry Smith /*MC 1417d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1418d382aafbSBarry Smith 1419eca87e8dSBarry Smith Synopsis: 1420eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1421eca87e8dSBarry Smith 1422d382aafbSBarry Smith Collective on PetscObject 1423d382aafbSBarry Smith 1424d382aafbSBarry Smith Input Parameters: 1425d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1426d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1427d382aafbSBarry Smith . name - name associated with the child function 1428d382aafbSBarry Smith . fname - name of the function 1429d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1430d382aafbSBarry Smith 1431d382aafbSBarry Smith Level: advanced 1432d382aafbSBarry Smith 1433d382aafbSBarry Smith 1434d382aafbSBarry Smith Notes: 1435d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1436d382aafbSBarry Smith 1437d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1438d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1439d382aafbSBarry Smith 1440d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 1441*e2e64c6bSBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared --with-dynamic) 1442d382aafbSBarry Smith enabled. 1443d382aafbSBarry Smith 1444d382aafbSBarry Smith Concepts: objects^composing functions 1445d382aafbSBarry Smith Concepts: composing functions 1446d382aafbSBarry Smith Concepts: functions^querying 1447d382aafbSBarry Smith Concepts: objects^querying 1448d382aafbSBarry Smith Concepts: querying objects 1449d382aafbSBarry Smith 1450d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1451d382aafbSBarry Smith M*/ 1452d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1453d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1454d382aafbSBarry Smith #else 1455d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1456d382aafbSBarry Smith #endif 1457d382aafbSBarry Smith 1458d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1459d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1460d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1461d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1462d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1463d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectPublish(PetscObject); 1464d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectChangeTypeName(PetscObject,const char[]); 1465d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectRegisterDestroy(PetscObject); 1466d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectRegisterDestroyAll(void); 1467d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscObjectName(PetscObject); 1468d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTypeCompare(PetscObject,const char[],PetscTruth*); 1469d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRegisterFinalize(PetscErrorCode (*)(void)); 1470d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRegisterFinalizeAll(void); 1471d382aafbSBarry Smith 1472d382aafbSBarry Smith /* 1473d382aafbSBarry Smith Defines PETSc error handling. 1474d382aafbSBarry Smith */ 1475d382aafbSBarry Smith #include "petscerror.h" 1476d382aafbSBarry Smith 1477d382aafbSBarry Smith /*S 1478d382aafbSBarry Smith PetscOList - Linked list of PETSc objects, accessable by string name 1479d382aafbSBarry Smith 14801d0fab5eSBarry Smith Level: developer 1481d382aafbSBarry Smith 14821d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 14831d0fab5eSBarry Smith 14841d0fab5eSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery() 1485d382aafbSBarry Smith S*/ 1486d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1487d382aafbSBarry Smith 1488d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListDestroy(PetscOList); 1489d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListFind(PetscOList,const char[],PetscObject*); 1490d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListReverseFind(PetscOList,PetscObject,char**); 1491d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListAdd(PetscOList *,const char[],PetscObject); 1492d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOListDuplicate(PetscOList,PetscOList *); 1493d382aafbSBarry Smith 1494d382aafbSBarry Smith /* 1495d382aafbSBarry Smith Dynamic library lists. Lists of names of routines in dynamic 1496d382aafbSBarry Smith link libraries that will be loaded as needed. 1497d382aafbSBarry Smith */ 1498d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1499d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListDestroy(PetscFList*); 1500d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListFind(PetscFList,MPI_Comm,const char[],void (**)(void)); 1501d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1502d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1503d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1504d382aafbSBarry Smith #else 1505d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1506d382aafbSBarry Smith #endif 1507d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListDuplicate(PetscFList,PetscFList *); 1508d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListView(PetscFList,PetscViewer); 1509d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListConcat(const char [],const char [],char []); 1510d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFListGet(PetscFList,char ***,int*); 1511d382aafbSBarry Smith 1512d382aafbSBarry Smith /*S 1513d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1514d382aafbSBarry Smith 1515d382aafbSBarry Smith Level: advanced 1516d382aafbSBarry Smith 1517*e2e64c6bSBarry Smith --with-shared --with-dynamic must be used with ./configure to use dynamic libraries 1518d382aafbSBarry Smith 1519d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1520d382aafbSBarry Smith S*/ 1521d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1522d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscDLLibrary DLLibrariesLoaded; 1523d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1524d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1525d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1526d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryPrintPath(PetscDLLibrary); 1527d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscTruth *); 1528d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1529d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryClose(PetscDLLibrary); 1530d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1531d382aafbSBarry Smith 1532d382aafbSBarry Smith /* 1533d382aafbSBarry Smith Useful utility routines 1534d382aafbSBarry Smith */ 1535d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1536d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1537d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1538d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1)) 1539d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1)) 1540d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1541d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1)) 1542d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1)) 1543d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBarrier(PetscObject); 1544d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscMPIDump(FILE*); 1545d382aafbSBarry Smith 1546d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1547d382aafbSBarry Smith /* 1548d382aafbSBarry Smith Defines basic graphics available from PETSc. 1549d382aafbSBarry Smith */ 1550d382aafbSBarry Smith #include "petscdraw.h" 1551d382aafbSBarry Smith 1552d382aafbSBarry Smith /* 1553d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1554d382aafbSBarry Smith */ 1555d382aafbSBarry Smith #include "private/petscimpl.h" 1556d382aafbSBarry Smith /* 1557d382aafbSBarry Smith Defines PETSc profiling. 1558d382aafbSBarry Smith */ 1559d382aafbSBarry Smith #include "petsclog.h" 1560d382aafbSBarry Smith 15616c7e564aSBarry Smith 1562d382aafbSBarry Smith /* 1563d382aafbSBarry Smith For locking, unlocking and destroying AMS memories associated with 1564d382aafbSBarry Smith PETSc objects. Not currently used. 1565d382aafbSBarry Smith */ 1566d382aafbSBarry Smith #define PetscPublishAll(v) 0 1567d382aafbSBarry Smith #define PetscObjectTakeAccess(obj) 0 1568d382aafbSBarry Smith #define PetscObjectGrantAccess(obj) 0 1569d382aafbSBarry Smith #define PetscObjectDepublish(obj) 0 1570d382aafbSBarry Smith 1571d382aafbSBarry Smith /* 1572d382aafbSBarry Smith Simple PETSc parallel IO for ASCII printing 1573d382aafbSBarry Smith */ 1574d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFixFilename(const char[],char[]); 1575d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1576d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFClose(MPI_Comm,FILE*); 1577d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 1578d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 1579d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSNPrintf(char*,size_t,const char [],...); 1580d382aafbSBarry Smith 1581d382aafbSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1582d382aafbSBarry Smith #include <stdarg.h> 1583d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscVSNPrintf(char*,size_t,const char[],int*,va_list); 1584d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT (*PetscVFPrintf)(FILE*,const char[],va_list); 1585d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscVFPrintfDefault(FILE*,const char[],va_list); 1586d382aafbSBarry Smith 1587d382aafbSBarry Smith /*MC 1588d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1589d382aafbSBarry Smith 1590d382aafbSBarry Smith Synopsis: 1591d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1592d382aafbSBarry Smith 1593eca87e8dSBarry Smith Not Collective 1594eca87e8dSBarry Smith 1595d382aafbSBarry Smith Input Parameters: 1596d382aafbSBarry Smith . format - the usual printf() format string 1597d382aafbSBarry Smith 1598d382aafbSBarry Smith Options Database Keys: 1599d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1600d382aafbSBarry Smith (default) stderr 1601d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1602d382aafbSBarry Smith error is handled.) 1603d382aafbSBarry Smith 1604d382aafbSBarry Smith Notes: Use 1605d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1606d382aafbSBarry Smith $ error is handled.) and 1607d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1608d382aafbSBarry Smith 1609d382aafbSBarry Smith Use 1610d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1611d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1612d382aafbSBarry Smith 1613d382aafbSBarry Smith Use 1614d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1615d382aafbSBarry Smith 1616d382aafbSBarry Smith Level: developer 1617d382aafbSBarry Smith 1618d382aafbSBarry Smith Fortran Note: 1619d382aafbSBarry Smith This routine is not supported in Fortran. 1620d382aafbSBarry Smith 1621d382aafbSBarry Smith Concepts: error messages^printing 1622d382aafbSBarry Smith Concepts: printing^error messages 1623d382aafbSBarry Smith 1624d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush() 1625d382aafbSBarry Smith M*/ 1626d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1627d382aafbSBarry Smith 1628d382aafbSBarry Smith /*MC 1629d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1630d382aafbSBarry Smith 1631d382aafbSBarry Smith Synopsis: 1632d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1633d382aafbSBarry Smith 1634eca87e8dSBarry Smith Not Collective 1635eca87e8dSBarry Smith 1636d382aafbSBarry Smith Input Parameters: 1637d382aafbSBarry Smith . format - the usual printf() format string 1638d382aafbSBarry Smith 1639d382aafbSBarry Smith Level: developer 1640d382aafbSBarry Smith 1641d382aafbSBarry Smith Fortran Note: 1642d382aafbSBarry Smith This routine is not supported in Fortran. 1643d382aafbSBarry Smith 1644d382aafbSBarry Smith Concepts: help messages^printing 1645d382aafbSBarry Smith Concepts: printing^help messages 1646d382aafbSBarry Smith 1647d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1648d382aafbSBarry Smith M*/ 1649d382aafbSBarry Smith EXTERN PETSC_DLLEXPORT PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1650d382aafbSBarry Smith 1651d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1652d382aafbSBarry Smith EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1653d382aafbSBarry Smith EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1654d382aafbSBarry Smith 1655d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1656d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1657d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPClose(MPI_Comm,FILE*); 1658d382aafbSBarry Smith #endif 1659d382aafbSBarry Smith 1660d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedPrintf(MPI_Comm,const char[],...) PETSC_PRINTF_FORMAT_CHECK(2,3); 1661d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...) PETSC_PRINTF_FORMAT_CHECK(3,4); 1662d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFlush(MPI_Comm); 1663d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1664d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1665d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1666d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetPetscDir(const char*[]); 1667d382aafbSBarry Smith 1668d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1669d382aafbSBarry Smith 1670d382aafbSBarry Smith /*S 1671d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1672d382aafbSBarry Smith 1673d382aafbSBarry Smith Level: advanced 1674d382aafbSBarry Smith 1675d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1676d382aafbSBarry Smith S*/ 16770700a824SBarry Smith extern PetscClassId PETSC_DLLEXPORT PETSC_CONTAINER_CLASSID; 1678d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1679d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerGetPointer(PetscContainer,void **); 1680d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerSetPointer(PetscContainer,void *); 1681d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerDestroy(PetscContainer); 1682d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerCreate(MPI_Comm,PetscContainer *); 1683d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1684d382aafbSBarry Smith 1685d382aafbSBarry Smith /* 1686d382aafbSBarry Smith For use in debuggers 1687d382aafbSBarry Smith */ 1688d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscMPIInt PetscGlobalRank; 1689d382aafbSBarry Smith extern PETSC_DLLEXPORT PetscMPIInt PetscGlobalSize; 1690d382aafbSBarry Smith 1691d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1692d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1693d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1694d382aafbSBarry Smith 1695d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1696d382aafbSBarry Smith #include <memory.h> 1697d382aafbSBarry Smith #endif 1698d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1699d382aafbSBarry Smith #include <stdlib.h> 1700d382aafbSBarry Smith #endif 1701d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1702d382aafbSBarry Smith #include <strings.h> 1703d382aafbSBarry Smith #endif 1704d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1705d382aafbSBarry Smith #include <string.h> 1706d382aafbSBarry Smith #endif 17076c7e564aSBarry Smith 17086c7e564aSBarry Smith 1709d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H) 1710d382aafbSBarry Smith #include <xmmintrin.h> 1711d382aafbSBarry Smith #endif 1712d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1713d382aafbSBarry Smith #include <stdint.h> 1714d382aafbSBarry Smith #endif 1715d382aafbSBarry Smith 1716d382aafbSBarry Smith /*@C 1717d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1718d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1719d382aafbSBarry Smith PetscMemmove() in that case. 1720d382aafbSBarry Smith 1721d382aafbSBarry Smith Not Collective 1722d382aafbSBarry Smith 1723d382aafbSBarry Smith Input Parameters: 1724d382aafbSBarry Smith + b - pointer to initial memory space 1725d382aafbSBarry Smith - n - length (in bytes) of space to copy 1726d382aafbSBarry Smith 1727d382aafbSBarry Smith Output Parameter: 1728d382aafbSBarry Smith . a - pointer to copy space 1729d382aafbSBarry Smith 1730d382aafbSBarry Smith Level: intermediate 1731d382aafbSBarry Smith 1732d382aafbSBarry Smith Compile Option: 1733d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1734d382aafbSBarry Smith for memory copies on double precision values. 1735d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1736d382aafbSBarry Smith for memory copies on double precision values. 1737d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1738d382aafbSBarry Smith for memory copies on double precision values. 1739d382aafbSBarry Smith 1740d382aafbSBarry Smith Note: 1741d382aafbSBarry Smith This routine is analogous to memcpy(). 1742d382aafbSBarry Smith 1743d382aafbSBarry Smith Concepts: memory^copying 1744d382aafbSBarry Smith Concepts: copying^memory 1745d382aafbSBarry Smith 1746d382aafbSBarry Smith .seealso: PetscMemmove() 1747d382aafbSBarry Smith 1748d382aafbSBarry Smith @*/ 1749d382aafbSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PETSC_DLLEXPORT PetscMemcpy(void *a,const void *b,size_t n) 1750d382aafbSBarry Smith { 1751d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1752d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1753d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1754d382aafbSBarry Smith if (n > 0 && !b) SETERRQ(PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1755d382aafbSBarry Smith if (n > 0 && !a) SETERRQ(PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith PetscFunctionBegin; 1758d382aafbSBarry Smith if (a != b) { 1759d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1760d382aafbSBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) { 1761d382aafbSBarry Smith SETERRQ3(PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1762d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1763d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1764d382aafbSBarry Smith } 1765d382aafbSBarry Smith #endif 1766d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1767d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1768d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1769d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1770d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1771d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1772d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1773d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1774d382aafbSBarry Smith #else 1775d382aafbSBarry Smith size_t i; 1776d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1777d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1778d382aafbSBarry Smith #endif 1779d382aafbSBarry Smith } else { 1780d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1781d382aafbSBarry Smith } 1782d382aafbSBarry Smith #elif defined(PETSC_HAVE__INTEL_FAST_MEMCPY) 1783d382aafbSBarry Smith _intel_fast_memcpy((char*)(a),(char*)(b),n); 1784d382aafbSBarry Smith #else 1785d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1786d382aafbSBarry Smith #endif 1787d382aafbSBarry Smith } 1788d382aafbSBarry Smith PetscFunctionReturn(0); 1789d382aafbSBarry Smith } 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith /*@C 1792d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1793d382aafbSBarry Smith 1794d382aafbSBarry Smith Not Collective 1795d382aafbSBarry Smith 1796d382aafbSBarry Smith Input Parameters: 1797d382aafbSBarry Smith + a - pointer to beginning memory location 1798d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1799d382aafbSBarry Smith 1800d382aafbSBarry Smith Level: intermediate 1801d382aafbSBarry Smith 1802d382aafbSBarry Smith Compile Option: 1803d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1804d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1805d382aafbSBarry Smith 1806d382aafbSBarry Smith Concepts: memory^zeroing 1807d382aafbSBarry Smith Concepts: zeroing^memory 1808d382aafbSBarry Smith 1809d382aafbSBarry Smith .seealso: PetscMemcpy() 1810d382aafbSBarry Smith @*/ 1811d382aafbSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PETSC_DLLEXPORT PetscMemzero(void *a,size_t n) 1812d382aafbSBarry Smith { 1813d382aafbSBarry Smith if (n > 0) { 1814d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1815d382aafbSBarry Smith if (!a) SETERRQ(PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1816d382aafbSBarry Smith #endif 1817d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1818d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1819d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1820d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1821d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1822d382aafbSBarry Smith } else { 1823d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1824d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1825d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1826d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1827d382aafbSBarry Smith } else { 1828d382aafbSBarry Smith #endif 1829d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1830d382aafbSBarry Smith bzero((char *)a,n); 1831d382aafbSBarry Smith #elif defined (PETSC_HAVE__INTEL_FAST_MEMSET) 1832d382aafbSBarry Smith _intel_fast_memset((char*)a,0,n); 1833d382aafbSBarry Smith #else 1834d382aafbSBarry Smith memset((char*)a,0,n); 1835d382aafbSBarry Smith #endif 1836d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1837d382aafbSBarry Smith } 1838d382aafbSBarry Smith #endif 1839d382aafbSBarry Smith } 1840d382aafbSBarry Smith return 0; 1841d382aafbSBarry Smith } 1842d382aafbSBarry Smith 1843d382aafbSBarry Smith /*MC 1844d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1845d382aafbSBarry Smith 1846eca87e8dSBarry Smith Synopsis: 1847eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1848eca87e8dSBarry Smith 1849d382aafbSBarry Smith Not Collective 1850d382aafbSBarry Smith 1851d382aafbSBarry Smith Input Parameters: 1852d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1853d382aafbSBarry Smith . n - number of elements to fetch 1854d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 1855d382aafbSBarry Smith - t - temporal locality (0,1,2,3), see note 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith Level: developer 1858d382aafbSBarry Smith 1859d382aafbSBarry Smith Notes: 1860d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1861d382aafbSBarry Smith 1862d382aafbSBarry Smith There are four levels of temporal locality (not all architectures distinguish) 1863d382aafbSBarry Smith + 0 - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 1864d382aafbSBarry Smith . 1 - Temporal with respect to high-level cache only. Only prefetches to high-level cache (not L1), kept at high levels after eviction from L1. 1865d382aafbSBarry Smith . 2 - Same as 1, but keep in mid-level cache. (On most systems, 1 and 2 are equivalent.) 1866d382aafbSBarry Smith - 3 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1869d382aafbSBarry Smith address). 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith Concepts: memory 1872d382aafbSBarry Smith M*/ 1873d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1874d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1875d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1876d382aafbSBarry Smith } while (0) 1877d382aafbSBarry Smith 1878d382aafbSBarry Smith /* 1879d382aafbSBarry Smith Allows accessing Matlab Engine 1880d382aafbSBarry Smith */ 1881d382aafbSBarry Smith #include "petscmatlab.h" 1882d382aafbSBarry Smith 1883d382aafbSBarry Smith /* 1884d382aafbSBarry Smith Determine if some of the kernel computation routines use 1885d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1886d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1887d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1888*e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1889d382aafbSBarry Smith */ 1890d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1891d382aafbSBarry Smith 1892d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1893d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1894d382aafbSBarry Smith #endif 1895d382aafbSBarry Smith 1896d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCSRPERM) 1897d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCSRPERM 1898d382aafbSBarry Smith #endif 1899d382aafbSBarry Smith 1900d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1901d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1902d382aafbSBarry Smith #endif 1903d382aafbSBarry Smith 1904d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1905d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1906d382aafbSBarry Smith #endif 1907d382aafbSBarry Smith 1908d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1909d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1910d382aafbSBarry Smith #endif 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1913d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1914d382aafbSBarry Smith #endif 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1917d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1918d382aafbSBarry Smith #endif 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1921d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1922d382aafbSBarry Smith #endif 1923d382aafbSBarry Smith 1924d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1925d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1926d382aafbSBarry Smith #endif 1927d382aafbSBarry Smith 1928d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1929d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1930d382aafbSBarry Smith #endif 1931d382aafbSBarry Smith 1932d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1933d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1934d382aafbSBarry Smith #endif 1935d382aafbSBarry Smith 1936d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1937d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1938d382aafbSBarry Smith #endif 1939d382aafbSBarry Smith 1940d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1941d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1942d382aafbSBarry Smith #endif 1943d382aafbSBarry Smith 1944d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1945d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1946d382aafbSBarry Smith #endif 1947d382aafbSBarry Smith 1948d382aafbSBarry Smith #endif 1949d382aafbSBarry Smith 1950d382aafbSBarry Smith /* 1951d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1952d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1953d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1954d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1955d382aafbSBarry Smith ugly extern "C" {} wrappers. 1956d382aafbSBarry Smith */ 1957d382aafbSBarry Smith #if defined(__cplusplus) 1958d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1959d382aafbSBarry Smith #define EXTERN_C_END } 1960d382aafbSBarry Smith #else 1961d382aafbSBarry Smith #define EXTERN_C_BEGIN 1962d382aafbSBarry Smith #define EXTERN_C_END 1963d382aafbSBarry Smith #endif 1964d382aafbSBarry Smith 1965d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith /*MC 1968d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1969d382aafbSBarry Smith communication 1970d382aafbSBarry Smith 1971d382aafbSBarry Smith Level: beginner 1972d382aafbSBarry Smith 1973d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1974d382aafbSBarry Smith 1975d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1976d382aafbSBarry Smith M*/ 1977d382aafbSBarry Smith 1978d382aafbSBarry Smith /*MC 1979d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 1980d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 1981d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1982d382aafbSBarry Smith 1983d382aafbSBarry Smith 1984d382aafbSBarry Smith Level: beginner 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1987d382aafbSBarry Smith M*/ 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith /*MC 1990d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 1991d382aafbSBarry Smith 1992d382aafbSBarry Smith Level: beginner 1993d382aafbSBarry Smith 1994d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 1995d382aafbSBarry Smith M*/ 1996d382aafbSBarry Smith 1997d382aafbSBarry Smith /*MC 1998d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 1999d382aafbSBarry Smith Level: beginner 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 2002d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 2005d382aafbSBarry Smith M*/ 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith /*MC 2008d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2009d382aafbSBarry Smith 2010d382aafbSBarry Smith Level: beginner 2011d382aafbSBarry Smith 2012d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2013d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2014d382aafbSBarry Smith 2015d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2016d382aafbSBarry Smith M*/ 2017d382aafbSBarry Smith 2018d382aafbSBarry Smith /*MC 2019d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2020d382aafbSBarry Smith 2021d382aafbSBarry Smith Level: beginner 2022d382aafbSBarry Smith 2023d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2024d382aafbSBarry Smith pass this value 2025d382aafbSBarry Smith 2026d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2027d382aafbSBarry Smith M*/ 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2030d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2031d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2032d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2033d382aafbSBarry Smith #else 2034d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2035d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2036d382aafbSBarry Smith #endif 2037d382aafbSBarry Smith #endif 2038d382aafbSBarry Smith 2039d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2042d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2043d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2044d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2045d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2046d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2047d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2048d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2049d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2050d382aafbSBarry Smith 2051d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2052d382aafbSBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2053d382aafbSBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2054d382aafbSBarry Smith #define PetscMPIIntCast(a) (a);PetscMPIIntCheck(a) 2055d382aafbSBarry Smith #define PetscBLASIntCast(a) (a);PetscBLASIntCheck(a) 2056d382aafbSBarry Smith 2057d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2058d382aafbSBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2059d382aafbSBarry Smith #define PetscHDF5IntCast(a) (a);PetscHDF5IntCheck(a) 2060d382aafbSBarry Smith #else 2061d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2062d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2063d382aafbSBarry Smith #endif 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith #else 2066d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2067d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2068d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2069d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2070d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2071d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2072d382aafbSBarry Smith #endif 2073d382aafbSBarry Smith 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith /* 2076d382aafbSBarry Smith The IBM include files define hz, here we hide it so that it may be used 2077d382aafbSBarry Smith as a regular user variable. 2078d382aafbSBarry Smith */ 2079d382aafbSBarry Smith #if defined(hz) 2080d382aafbSBarry Smith #undef hz 2081d382aafbSBarry Smith #endif 2082d382aafbSBarry Smith 2083d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2084d382aafbSBarry Smith 2085d382aafbSBarry Smith 2086d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2087d382aafbSBarry Smith #include <limits.h> 2088d382aafbSBarry Smith #endif 2089d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2090d382aafbSBarry Smith #include <sys/param.h> 2091d382aafbSBarry Smith #endif 2092d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2093d382aafbSBarry Smith #include <sys/types.h> 2094d382aafbSBarry Smith #endif 2095d382aafbSBarry Smith #if defined(MAXPATHLEN) 2096d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2097d382aafbSBarry Smith #elif defined(MAX_PATH) 2098d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2099d382aafbSBarry Smith #elif defined(_MAX_PATH) 2100d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2101d382aafbSBarry Smith #else 2102d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2103d382aafbSBarry Smith #endif 2104d382aafbSBarry Smith 2105d382aafbSBarry Smith /* Special support for C++ */ 2106d382aafbSBarry Smith #include "petscsys.hh" 21076c7e564aSBarry Smith 2108d382aafbSBarry Smith 2109d382aafbSBarry Smith /*MC 2110d382aafbSBarry Smith 2111d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2112d382aafbSBarry Smith 2113d382aafbSBarry Smith $ 1) classic Fortran 77 style 2114d382aafbSBarry Smith $#include "petscXXX.h" to work with material from the XXX component of PETSc 2115d382aafbSBarry Smith $ XXX variablename 2116d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2117d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2118d382aafbSBarry Smith $ 2119d382aafbSBarry Smith $ 2) classic Fortran 90 style 2120d382aafbSBarry Smith $#include "petscXXX.h" 2121d382aafbSBarry Smith $#include "petscXXX.h90" to work with material from the XXX component of PETSc 2122d382aafbSBarry Smith $ XXX variablename 2123d382aafbSBarry Smith $ 2124d382aafbSBarry Smith $ 3) Using Fortran modules 2125d382aafbSBarry Smith $#include "petscXXXdef.h" 2126d382aafbSBarry Smith $ use petscXXXX 2127d382aafbSBarry Smith $ XXX variablename 2128d382aafbSBarry Smith $ 2129d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2130d382aafbSBarry Smith $#include "petscXXXdef.h" 2131d382aafbSBarry Smith $ use petscXXXX 2132d382aafbSBarry Smith $ type(XXX) variablename 2133*e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2134d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2135d382aafbSBarry Smith 2136d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2137d382aafbSBarry Smith 2138d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2139d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2140d382aafbSBarry Smith $ integer variablename 2141d382aafbSBarry Smith $ 2142d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2143d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2144d382aafbSBarry Smith 2145d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2146d382aafbSBarry Smith for only a few PETSc functions. 2147d382aafbSBarry Smith 2148d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2149d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2150d382aafbSBarry Smith you cannot have something like 2151d382aafbSBarry Smith $ PetscInt row,col 2152d382aafbSBarry Smith $ PetscScalar val 2153d382aafbSBarry Smith $ ... 2154d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2155d382aafbSBarry Smith You must instead have 2156d382aafbSBarry Smith $ PetscInt row(1),col(1) 2157d382aafbSBarry Smith $ PetscScalar val(1) 2158d382aafbSBarry Smith $ ... 2159d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2160d382aafbSBarry Smith 2161d382aafbSBarry Smith 2162d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2163d382aafbSBarry Smith 2164d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2165d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2166d382aafbSBarry Smith 2167d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2168d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2169d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2170d382aafbSBarry Smith 2171d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2172*e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2173d382aafbSBarry Smith 2174d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2175d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2176d382aafbSBarry Smith 2177d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2178d382aafbSBarry Smith automatically by "make allfortranstubs". 2179d382aafbSBarry Smith 2180*e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2181d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2182d382aafbSBarry Smith include their predecessors 2183d382aafbSBarry Smith 2184d382aafbSBarry Smith Level: beginner 2185d382aafbSBarry Smith 2186d382aafbSBarry Smith M*/ 2187d382aafbSBarry Smith 2188d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetArchType(char[],size_t); 2189d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetHostName(char[],size_t); 2190d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetUserName(char[],size_t); 2191d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetProgramName(char[],size_t); 2192d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetProgramName(const char[]); 2193d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetDate(char[],size_t); 2194d382aafbSBarry Smith 2195d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortInt(PetscInt,PetscInt[]); 2196d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2197d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2198d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2199d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2200d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2201d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortReal(PetscInt,PetscReal[]); 2202d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2203d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2204d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2205d382aafbSBarry Smith 2206d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDisplay(void); 2207d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetDisplay(char[],size_t); 2208d382aafbSBarry Smith 2209d382aafbSBarry Smith /*E 2210d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2211d382aafbSBarry Smith with an optional dynamic library name, for example 2212d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2213d382aafbSBarry Smith 2214d382aafbSBarry Smith Level: beginner 2215d382aafbSBarry Smith 2216*e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2217d382aafbSBarry Smith with the option --download-sprng 2218d382aafbSBarry Smith 2219d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 2220d382aafbSBarry Smith E*/ 2221d382aafbSBarry Smith #define PetscRandomType char* 2222d382aafbSBarry Smith #define PETSCRAND "rand" 2223d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2224d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2225d382aafbSBarry Smith 2226d382aafbSBarry Smith /* Logging support */ 22270700a824SBarry Smith extern PETSC_DLLEXPORT PetscClassId PETSC_RANDOM_CLASSID; 2228d382aafbSBarry Smith 2229d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomInitializePackage(const char[]); 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith /*S 2232d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2233d382aafbSBarry Smith 2234d382aafbSBarry Smith Level: intermediate 2235d382aafbSBarry Smith 2236d382aafbSBarry Smith Concepts: random numbers 2237d382aafbSBarry Smith 2238d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2239d382aafbSBarry Smith S*/ 2240d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2241d382aafbSBarry Smith 2242d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2243d382aafbSBarry Smith extern PetscFList PetscRandomList; 2244d382aafbSBarry Smith extern PetscTruth PetscRandomRegisterAllCalled; 2245d382aafbSBarry Smith 2246d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegisterAll(const char []); 2247d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2248d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomRegisterDestroy(void); 2249d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetType(PetscRandom, const PetscRandomType); 2250d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetFromOptions(PetscRandom); 2251d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetType(PetscRandom, const PetscRandomType*); 2252d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomViewFromOptions(PetscRandom,char*); 2253d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomView(PetscRandom,PetscViewer); 2254d382aafbSBarry Smith 2255d382aafbSBarry Smith /*MC 2256d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2257d382aafbSBarry Smith 2258d382aafbSBarry Smith Synopsis: 22591890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2260d382aafbSBarry Smith 2261d382aafbSBarry Smith Not Collective 2262d382aafbSBarry Smith 2263d382aafbSBarry Smith Input Parameters: 2264d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2265d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2266d382aafbSBarry Smith . func_name - The name of routine to create method context 2267d382aafbSBarry Smith - create_func - The creation routine itself 2268d382aafbSBarry Smith 2269d382aafbSBarry Smith Notes: 2270d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2271d382aafbSBarry Smith 2272d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2273d382aafbSBarry Smith 2274d382aafbSBarry Smith Sample usage: 2275d382aafbSBarry Smith .vb 2276d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2277d382aafbSBarry Smith .ve 2278d382aafbSBarry Smith 2279d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2280d382aafbSBarry Smith .vb 2281d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2282d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2283d382aafbSBarry Smith .ve 2284d382aafbSBarry Smith or at runtime via the option 2285d382aafbSBarry Smith .vb 2286d382aafbSBarry Smith -random_type my_random_name 2287d382aafbSBarry Smith .ve 2288d382aafbSBarry Smith 2289d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2290d382aafbSBarry Smith 2291d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2292d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2293d382aafbSBarry Smith 2294d382aafbSBarry Smith Level: advanced 2295d382aafbSBarry Smith 2296d382aafbSBarry Smith .keywords: PetscRandom, register 2297d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2298d382aafbSBarry Smith M*/ 2299d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2300d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2301d382aafbSBarry Smith #else 2302d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2303d382aafbSBarry Smith #endif 2304d382aafbSBarry Smith 2305d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomCreate(MPI_Comm,PetscRandom*); 2306d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetValue(PetscRandom,PetscScalar*); 2307d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetValueReal(PetscRandom,PetscReal*); 2308d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2309d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2310d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSetSeed(PetscRandom,unsigned long); 2311d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomGetSeed(PetscRandom,unsigned long *); 2312d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomSeed(PetscRandom); 2313d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscRandomDestroy(PetscRandom); 2314d382aafbSBarry Smith 2315d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetFullPath(const char[],char[],size_t); 2316d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetRelativePath(const char[],char[],size_t); 2317d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetWorkingDirectory(char[],size_t); 2318d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetRealPath(const char[],char[]); 2319d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetHomeDirectory(char[],size_t); 2320d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTestFile(const char[],char,PetscTruth*); 2321d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscTestDirectory(const char[],char,PetscTruth*); 2322d382aafbSBarry Smith 2323d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2324d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2325d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscTruth); 2326d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscTruth); 2327d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryOpen(const char[],PetscFileMode,int *); 2328d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinaryClose(int); 2329d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSharedTmp(MPI_Comm,PetscTruth *); 2330d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSharedWorkingDirectory(MPI_Comm,PetscTruth *); 2331d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGetTmp(MPI_Comm,char[],size_t); 2332d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscTruth*); 2333d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscLs(MPI_Comm,const char[],char[],size_t,PetscTruth*); 2334d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscOpenSocket(char*,int,int*); 2335d382aafbSBarry Smith 2336d382aafbSBarry Smith /* 2337d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2338d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2339d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2340d382aafbSBarry Smith PetscBinarySeek(). 2341d382aafbSBarry Smith */ 2342d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2343d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2344d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2345d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2346d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2347d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2348d382aafbSBarry Smith 2349d382aafbSBarry Smith /*E 2350d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2351d382aafbSBarry Smith 2352d382aafbSBarry Smith Level: advanced 2353d382aafbSBarry Smith 2354d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2355d382aafbSBarry Smith E*/ 2356d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2357d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2358d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2359d382aafbSBarry Smith 2360d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebugTerminal(const char[]); 2361d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebugger(const char[],PetscTruth); 2362d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDefaultDebugger(void); 2363d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSetDebuggerFromString(char*); 2364d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscAttachDebugger(void); 2365d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscStopForDebugger(void); 2366d382aafbSBarry Smith 2367d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2368d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2369d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2370d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2371d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2372d382aafbSBarry Smith 2373d382aafbSBarry Smith EXTERN PetscErrorCode PETSC_DLLEXPORT PetscSSEIsEnabled(MPI_Comm,PetscTruth *,PetscTruth *); 2374d382aafbSBarry Smith 2375d382aafbSBarry Smith /*E 2376d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2377d382aafbSBarry Smith 2378d382aafbSBarry Smith Level: beginner 2379d382aafbSBarry Smith 2380d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2381d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2382d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2383d382aafbSBarry Smith E*/ 2384d382aafbSBarry Smith typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES} InsertMode; 2385d382aafbSBarry Smith 2386d382aafbSBarry Smith /*MC 2387d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2388d382aafbSBarry Smith 2389d382aafbSBarry Smith Level: beginner 2390d382aafbSBarry Smith 2391d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2392eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2393eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2394d382aafbSBarry Smith 2395d382aafbSBarry Smith M*/ 2396d382aafbSBarry Smith 2397d382aafbSBarry Smith /*MC 2398d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2399d382aafbSBarry Smith value into that location 2400d382aafbSBarry Smith 2401d382aafbSBarry Smith Level: beginner 2402d382aafbSBarry Smith 2403d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2404eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2405eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2406d382aafbSBarry Smith 2407d382aafbSBarry Smith M*/ 2408d382aafbSBarry Smith 2409d382aafbSBarry Smith /*MC 2410d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2411d382aafbSBarry Smith 2412d382aafbSBarry Smith Level: beginner 2413d382aafbSBarry Smith 2414d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2415d382aafbSBarry Smith 2416d382aafbSBarry Smith M*/ 2417d382aafbSBarry Smith 2418d382aafbSBarry Smith /*E 2419d382aafbSBarry Smith ScatterMode - Determines the direction of a scatter 2420d382aafbSBarry Smith 2421d382aafbSBarry Smith Level: beginner 2422d382aafbSBarry Smith 2423d382aafbSBarry Smith .seealso: VecScatter, VecScatterBegin(), VecScatterEnd() 2424d382aafbSBarry Smith E*/ 2425d382aafbSBarry Smith typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode; 2426d382aafbSBarry Smith 2427d382aafbSBarry Smith /*MC 2428d382aafbSBarry Smith SCATTER_FORWARD - Scatters the values as dictated by the VecScatterCreate() call 2429d382aafbSBarry Smith 2430d382aafbSBarry Smith Level: beginner 2431d382aafbSBarry Smith 2432d382aafbSBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD_LOCAL, 2433d382aafbSBarry Smith SCATTER_REVERSE_LOCAL 2434d382aafbSBarry Smith 2435d382aafbSBarry Smith M*/ 2436d382aafbSBarry Smith 2437d382aafbSBarry Smith /*MC 2438d382aafbSBarry Smith SCATTER_REVERSE - Moves the values in the opposite direction then the directions indicated in 2439d382aafbSBarry Smith in the VecScatterCreate() 2440d382aafbSBarry Smith 2441d382aafbSBarry Smith Level: beginner 2442d382aafbSBarry Smith 2443d382aafbSBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL, 2444d382aafbSBarry Smith SCATTER_REVERSE_LOCAL 2445d382aafbSBarry Smith 2446d382aafbSBarry Smith M*/ 2447d382aafbSBarry Smith 2448d382aafbSBarry Smith /*MC 2449d382aafbSBarry Smith SCATTER_FORWARD_LOCAL - Scatters the values as dictated by the VecScatterCreate() call except NO parallel communication 2450d382aafbSBarry Smith is done. Any variables that have be moved between processes are ignored 2451d382aafbSBarry Smith 2452d382aafbSBarry Smith Level: developer 2453d382aafbSBarry Smith 2454d382aafbSBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD, 2455d382aafbSBarry Smith SCATTER_REVERSE_LOCAL 2456d382aafbSBarry Smith 2457d382aafbSBarry Smith M*/ 2458d382aafbSBarry Smith 2459d382aafbSBarry Smith /*MC 2460d382aafbSBarry Smith SCATTER_REVERSE_LOCAL - Moves the values in the opposite direction then the directions indicated in 2461d382aafbSBarry Smith in the VecScatterCreate() except NO parallel communication 2462d382aafbSBarry Smith is done. Any variables that have be moved between processes are ignored 2463d382aafbSBarry Smith 2464d382aafbSBarry Smith Level: developer 2465d382aafbSBarry Smith 2466d382aafbSBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL, 2467d382aafbSBarry Smith SCATTER_REVERSE 2468d382aafbSBarry Smith 2469d382aafbSBarry Smith M*/ 2470d382aafbSBarry Smith 2471d382aafbSBarry Smith /*S 2472d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2473d382aafbSBarry Smith 2474d382aafbSBarry Smith Level: advanced 2475d382aafbSBarry Smith 2476d382aafbSBarry Smith Concepts: communicator, create 2477d382aafbSBarry Smith S*/ 2478d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2479d382aafbSBarry Smith 2480d382aafbSBarry Smith struct _n_PetscSubcomm { 2481d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2482d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2483d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2484d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2485d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2486d382aafbSBarry Smith }; 2487d382aafbSBarry Smith 2488d382aafbSBarry Smith EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommCreate(MPI_Comm,PetscInt,PetscSubcomm*); 2489d382aafbSBarry Smith EXTERN PetscErrorCode PETSCMAT_DLLEXPORT PetscSubcommDestroy(PetscSubcomm); 2490d382aafbSBarry Smith 2491d382aafbSBarry Smith PETSC_EXTERN_CXX_END 24926c7e564aSBarry Smith 2493d382aafbSBarry Smith #endif 2494