1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 111c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 121c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 131cc8b206SBarry Smith directory as the other PETSc include files. 14d382aafbSBarry Smith */ 152c8e378dSBarry Smith #include <petscconf.h> 161c77a0c5SBarry Smith #include <petscconf_poison.h> 172c8e378dSBarry Smith #include <petscfix.h> 18d382aafbSBarry Smith 1920c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 2005035670SJunchao Zhang #define PETSC_HAVE_DEVICE 2105035670SJunchao Zhang #endif 2205035670SJunchao Zhang 2373fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2473fca5a0SBarry Smith /* 2573fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2673fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2773fca5a0SBarry Smith */ 28216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2973fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 3073fca5a0SBarry Smith # endif 31216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3273fca5a0SBarry Smith # define _BSD_SOURCE 3373fca5a0SBarry Smith # endif 3407f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3507f00807SSatish Balay # define _DEFAULT_SOURCE 3607f00807SSatish Balay # endif 37ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 38ea0fecefSShri Abhyankar # define _GNU_SOURCE 39ea0fecefSShri Abhyankar # endif 4073fca5a0SBarry Smith #endif 4173fca5a0SBarry Smith 42df4397b0SStefano Zampini #include <petscsystypes.h> 43df4397b0SStefano Zampini 44d382aafbSBarry Smith /* ========================================================================== */ 45d382aafbSBarry Smith /* 462c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 47d382aafbSBarry Smith */ 481ec50b02SJed Brown #if defined(__cplusplus) 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 501ec50b02SJed Brown #else 511ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 521ec50b02SJed Brown #endif 53d382aafbSBarry Smith 54c5e4d11fSDmitry Karpeev /* ========================================================================== */ 55c5e4d11fSDmitry Karpeev /* 56c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 571cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 581cc8b206SBarry Smith file within an extern "C". 59c5e4d11fSDmitry Karpeev */ 60c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 61c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 62c5e4d11fSDmitry Karpeev #endif 63c5e4d11fSDmitry Karpeev 64ed938b00SJed Brown #if defined(__cplusplus) 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 66ed938b00SJed Brown #else 67ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 70ed938b00SJed Brown #if defined(__cplusplus) 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 72ed938b00SJed Brown #else 7358c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 74ed938b00SJed Brown #endif 75ed938b00SJed Brown 7658c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7758c433abSLisandro Dalcin 78ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 79014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 80014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 8121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8226703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8326703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8426703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8526703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 87014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 88014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 90d382aafbSBarry Smith #else 91014dd563SJed Brown # define PETSC_DLLEXPORT 92014dd563SJed Brown # define PETSC_DLLIMPORT 9321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 94014dd563SJed Brown #endif 95014dd563SJed Brown 96014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 98014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 99014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 100014dd563SJed Brown #endif 101014dd563SJed Brown 1021cc8b206SBarry Smith /* 1031cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1041cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1051cc8b206SBarry Smith used from C and are always visible in the shared libraries 1061cc8b206SBarry Smith */ 1072c280183SJed Brown #if defined(__cplusplus) 108014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 109638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 11021f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 111014dd563SJed Brown #else 112014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 113638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1146258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 115d382aafbSBarry Smith #endif 11627710113SBarry Smith 117030f984aSJacob Faibussowitsch #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX11) 118030f984aSJacob Faibussowitsch # define PETSC_NULLPTR nullptr 119030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR constexpr 120030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT noexcept 121030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) noexcept(cond_) 122030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) func_ = default 123030f984aSJacob Faibussowitsch #else 124030f984aSJacob Faibussowitsch # define PETSC_NULLPTR NULL 125030f984aSJacob Faibussowitsch # define PETSC_CONSTEXPR 126030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT 127030f984aSJacob Faibussowitsch # define PETSC_NOEXCEPT_ARG(cond_) 128030f984aSJacob Faibussowitsch # define PETSC_CXX_DEFAULT(func_) 129030f984aSJacob Faibussowitsch #endif 130030f984aSJacob Faibussowitsch 1310a996781SJunchao Zhang /* C++17 features */ 1320a996781SJunchao Zhang /* We met cases that the host CXX compiler (say mpicxx) supports C++17, but nvcc does not agree, even with -ccbin mpicxx! */ 1330a996781SJunchao Zhang #if defined(__cplusplus) && defined(PETSC_HAVE_CXX_DIALECT_CXX17) && (!defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_CUDA_DIALECT_CXX17)) 134030f984aSJacob Faibussowitsch # define PETSC_NODISCARD [[nodiscard]] 135030f984aSJacob Faibussowitsch #else 136030f984aSJacob Faibussowitsch # define PETSC_NODISCARD 137030f984aSJacob Faibussowitsch #endif 138030f984aSJacob Faibussowitsch 1392c8e378dSBarry Smith #include <petscversion.h> 140a17b96a8SKyle Gerard Felker #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://petsc.org/\n" 141d382aafbSBarry Smith 142d382aafbSBarry Smith /* ========================================================================== */ 143d382aafbSBarry Smith 144d382aafbSBarry Smith /* 145d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 146d382aafbSBarry Smith 147d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 148d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 149d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 150d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 151d382aafbSBarry Smith mpicxx.h directly in their code 152d382aafbSBarry Smith */ 153fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 154d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 155fa9e63e2SJed Brown #endif 156fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 157d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 158fa9e63e2SJed Brown #endif 159e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 160e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 161e771154cSJed Brown #else 1622c8e378dSBarry Smith # include <mpi.h> 163e771154cSJed Brown #endif 16465013866SBarry Smith 1654e1ad211SJed Brown /*MC 1664e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1674e1ad211SJed Brown 1684e1ad211SJed Brown Notes: 1691393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1701393a3abSPatrick Sanan 1714e1ad211SJed Brown Typical usage is within normal code, 1724e1ad211SJed Brown 1734e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1744e1ad211SJed Brown 1754e1ad211SJed Brown but can also be used in the preprocessor, 1764e1ad211SJed Brown 1774e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1784e1ad211SJed Brown $ ... 1794e1ad211SJed Brown $ #else 1804e1ad211SJed Brown 1811393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1824e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1834e1ad211SJed Brown 1841393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1851393a3abSPatrick Sanan 1861393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1871393a3abSPatrick Sanan 1884e1ad211SJed Brown Developer Notes: 1894e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1904e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1914e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1924e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1934e1ad211SJed Brown 1944e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1954e1ad211SJed Brown implementation of variadic macros. 1964e1ad211SJed Brown 1974e1ad211SJed Brown Level: developer 1984e1ad211SJed Brown M*/ 1994e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 2004e1ad211SJed Brown # define PetscDefined_arg_1 shift, 2014e1ad211SJed Brown # define PetscDefined_arg_ shift, 2024e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 2034e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 2044e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 2054e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 2064e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 2074e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 2084e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 2094e1ad211SJed Brown #endif 2104e1ad211SJed Brown 211d382aafbSBarry Smith /* 212a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 213a7886beaSBarry Smith This usually happens because 214a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 215a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 216a7886beaSBarry Smith */ 217a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 218c9b973beSBarry Smith # if !defined(MPIUNI_H) 219a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 220a7886beaSBarry Smith # endif 22141f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 22241f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 22341f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 22441f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 22541f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 22641f4af4cSSatish Balay # endif 22741f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 22841f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 22941f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 23041f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 23141f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 23241f4af4cSSatish Balay # endif 233a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 23441f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 235a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 236ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 237a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 238a7886beaSBarry Smith # endif 239a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 240a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 241a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 242ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 243c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 244a7886beaSBarry Smith # endif 245d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 246d97fd468SStefano Zampini # if !defined(MSMPI_VER) 247d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 248d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 249d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 250d97fd468SStefano Zampini # endif 251d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 252d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 253a7886beaSBarry Smith #endif 254a7886beaSBarry Smith 255a7886beaSBarry Smith /* 2562981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 257d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 258d382aafbSBarry Smith */ 259d382aafbSBarry Smith #include <stdio.h> 260d382aafbSBarry Smith 261d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 262d382aafbSBarry Smith #if !defined(MPIAPI) 263d382aafbSBarry Smith #define MPIAPI 264d382aafbSBarry Smith #endif 265d382aafbSBarry Smith 2661cc8b206SBarry Smith /* 2671cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2681cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2691cc8b206SBarry Smith does not match the actual type of the argument being passed in 2701cc8b206SBarry Smith */ 271c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 272894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 273894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2748ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2758ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 276894dd566SJed Brown # endif 277894dd566SJed Brown #endif 278894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 279894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2808ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2818ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 282894dd566SJed Brown #endif 283b3506946SBarry Smith 2845a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 285df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 286e28ce29aSPatrick Sanan 287e28ce29aSPatrick Sanan /*MC 288e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 289e28ce29aSPatrick Sanan 290e28ce29aSPatrick Sanan Notes: 291e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 292e28ce29aSPatrick Sanan 293e28ce29aSPatrick Sanan Level: beginner 294e28ce29aSPatrick Sanan 295e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 296e28ce29aSPatrick Sanan M*/ 297e28ce29aSPatrick Sanan 29837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 299bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 300a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 301fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 302bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 303a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 304f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 305bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 306a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 307236ed0a3SSatish Balay #else 308bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 309236ed0a3SSatish Balay #endif 310b7b8f77aSBarry Smith 3117cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 312b7b8f77aSBarry Smith 313d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 314bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 315a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 316d382aafbSBarry Smith #else 317d382aafbSBarry Smith # define MPIU_INT MPI_INT 318a05e1a72SSatish Balay # define PetscInt_FMT "d" 319d382aafbSBarry Smith #endif 320d382aafbSBarry Smith 321503cfb0cSBarry Smith /* 322503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 323503cfb0cSBarry Smith */ 324e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 325d382aafbSBarry Smith 326d382aafbSBarry Smith /* 327d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 328d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 329d382aafbSBarry Smith */ 330014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 331d382aafbSBarry Smith 332d382aafbSBarry Smith /* 333d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 334d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 335d382aafbSBarry Smith */ 336014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 337d382aafbSBarry Smith 338d382aafbSBarry Smith /*MC 339d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 340d382aafbSBarry Smith 341d382aafbSBarry Smith Synopsis: 342aaa7dc30SBarry Smith #include <petscsys.h> 343ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 344d382aafbSBarry Smith 345eca87e8dSBarry Smith Not Collective 346eca87e8dSBarry Smith 347d382aafbSBarry Smith Input Parameters: 348d382aafbSBarry Smith . cond - condition or expression 349d382aafbSBarry Smith 350e28ce29aSPatrick Sanan Notes: 351e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 352d382aafbSBarry Smith branch is unlikely. 353d382aafbSBarry Smith 354d382aafbSBarry Smith Level: advanced 355d382aafbSBarry Smith 356cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 357d382aafbSBarry Smith M*/ 358d382aafbSBarry Smith 359d382aafbSBarry Smith /*MC 360d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 361d382aafbSBarry Smith 362d382aafbSBarry Smith Synopsis: 363aaa7dc30SBarry Smith #include <petscsys.h> 36423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 365d382aafbSBarry Smith 366eca87e8dSBarry Smith Not Collective 367eca87e8dSBarry Smith 368d382aafbSBarry Smith Input Parameters: 369d382aafbSBarry Smith . cond - condition or expression 370d382aafbSBarry Smith 371e28ce29aSPatrick Sanan Notes: 372e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 373d382aafbSBarry Smith branch is likely. 374d382aafbSBarry Smith 375d382aafbSBarry Smith Level: advanced 376d382aafbSBarry Smith 377d382aafbSBarry Smith .seealso: PetscUnlikely() 378d382aafbSBarry Smith M*/ 379d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 380d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 381d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 382d382aafbSBarry Smith #else 383cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 384cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 385d382aafbSBarry Smith #endif 386d382aafbSBarry Smith 387cf9c20a2SJed Brown /*MC 388cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 389cf9c20a2SJed Brown 390cf9c20a2SJed Brown Synopsis: 391cf9c20a2SJed Brown #include <petscsys.h> 392cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 393cf9c20a2SJed Brown 394cf9c20a2SJed Brown Not Collective 395cf9c20a2SJed Brown 396cf9c20a2SJed Brown Input Parameters: 397cf9c20a2SJed Brown . cond - condition or expression 398cf9c20a2SJed Brown 399cf9c20a2SJed Brown Notes: 400cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 401cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 402cf9c20a2SJed Brown 403cf9c20a2SJed Brown Level: advanced 404cf9c20a2SJed Brown 405cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 406cf9c20a2SJed Brown M*/ 407cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 408cf9c20a2SJed Brown 409c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 410c8b9133aSSatish Balay 4115c993f7fSStefano Zampini #if defined(__NEC__) 4125c993f7fSStefano Zampini # define PetscPragmaSIMD _Pragma("_NEC ivdep") 4135c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 414c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 4151dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 416c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 417*e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 418*e5518150SSatish Balay # if defined(_MSC_VER) 419160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 420*e5518150SSatish Balay # else 421*e5518150SSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 422*e5518150SSatish Balay # endif 423c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 424c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 425c8b9133aSSatish Balay #else 426c8b9133aSSatish Balay # define PetscPragmaSIMD 427c8b9133aSSatish Balay #endif 428c8b9133aSSatish Balay 429d382aafbSBarry Smith /* 430d382aafbSBarry Smith Declare extern C stuff after including external header files 431d382aafbSBarry Smith */ 432d382aafbSBarry Smith 4336a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 43470b3c8c7SBarry Smith 4356edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 4368b49ba18SBarry Smith /* 437390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4388b49ba18SBarry Smith */ 4398b49ba18SBarry Smith #include <petscmath.h> 4408b49ba18SBarry Smith 4416a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 442d382aafbSBarry Smith 443d382aafbSBarry Smith /*MC 4440298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 445d382aafbSBarry Smith 446d382aafbSBarry Smith Level: beginner 447d382aafbSBarry Smith 448e28ce29aSPatrick Sanan Note: 449e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 450d382aafbSBarry Smith some default 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Fortran Notes: 453e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 454d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 455d382aafbSBarry Smith 456e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 4590298fd71SBarry Smith #define PETSC_IGNORE NULL 460d382aafbSBarry Smith 461c528d872SBarry Smith /* This is deprecated */ 462c528d872SBarry Smith #define PETSC_NULL NULL 463c528d872SBarry Smith 464d382aafbSBarry Smith /*MC 465557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 466557d4da8SBarry Smith where you wish PETSc to use the default. 467557d4da8SBarry Smith 468557d4da8SBarry Smith Level: beginner 469557d4da8SBarry Smith 470e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DECIDE -1 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 477d382aafbSBarry Smith where you wish PETSc to compute the required value. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Developer Note: 482e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 483557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 484557d4da8SBarry Smith 4850298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 486d382aafbSBarry Smith 487d382aafbSBarry Smith M*/ 488d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 489d382aafbSBarry Smith 490d382aafbSBarry Smith /*MC 491557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 492557d4da8SBarry Smith where you wish PETSc to use the default. 493557d4da8SBarry Smith 494557d4da8SBarry Smith Level: beginner 495557d4da8SBarry Smith 496e28ce29aSPatrick Sanan Fortran Notes: 497e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 498557d4da8SBarry Smith 4990298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 500557d4da8SBarry Smith 501557d4da8SBarry Smith M*/ 502557d4da8SBarry Smith #define PETSC_DEFAULT -2 503557d4da8SBarry Smith 504557d4da8SBarry Smith /*MC 505d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 506ea8fe74dSBarry Smith all the processes that PETSc knows about. 507d382aafbSBarry Smith 508d382aafbSBarry Smith Level: beginner 509d382aafbSBarry Smith 510e28ce29aSPatrick Sanan Notes: 511e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 512d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 513d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 514a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 515a990b902SBarry Smith 516a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 517a990b902SBarry Smith is called because it may not have a valid value yet. 518d382aafbSBarry Smith 519d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 520d382aafbSBarry Smith 521d382aafbSBarry Smith M*/ 522014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 523d382aafbSBarry Smith 524d382aafbSBarry Smith /*MC 525503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 526d382aafbSBarry Smith 527d382aafbSBarry Smith Level: beginner 528d382aafbSBarry Smith 529e28ce29aSPatrick Sanan Notes: 530e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 531a990b902SBarry Smith 532d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 533d382aafbSBarry Smith 534d382aafbSBarry Smith M*/ 535d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 536d382aafbSBarry Smith 5376de5d289SStefano Zampini /*MC 5386de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5396de5d289SStefano Zampini MPI with MPI_Init_thread. 5406de5d289SStefano Zampini 5416de5d289SStefano Zampini Level: beginner 5426de5d289SStefano Zampini 5436de5d289SStefano Zampini Notes: 5446de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5456de5d289SStefano Zampini 5466de5d289SStefano Zampini .seealso: PetscInitialize() 5476de5d289SStefano Zampini 5486de5d289SStefano Zampini M*/ 5496de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5506de5d289SStefano Zampini 551d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5528ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 553014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 554014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5554cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 556d382aafbSBarry Smith 557014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 560d382aafbSBarry Smith 5617381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 56205035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 563cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5643c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5657381773fSBarry Smith #endif 5667381773fSBarry Smith 56705035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 56805035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 56905035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5703c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 57105035670SJunchao Zhang #endif 57205035670SJunchao Zhang 57359e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 57459e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 57559e55d94SJunchao Zhang #endif 57659e55d94SJunchao Zhang 57771438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 57871438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 57971438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 58071438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 58171438e86SJunchao Zhang #endif 58271438e86SJunchao Zhang 583540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 584540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 585540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 586540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 587540e20f2SPierre Jolivet #endif 588540e20f2SPierre Jolivet 589d382aafbSBarry Smith /*MC 59095dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 591d382aafbSBarry Smith 592eca87e8dSBarry Smith Synopsis: 593aaa7dc30SBarry Smith #include <petscsys.h> 594eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 595eca87e8dSBarry Smith 596eca87e8dSBarry Smith Not Collective 597eca87e8dSBarry Smith 598d382aafbSBarry Smith Input Parameter: 599d382aafbSBarry Smith . m - number of bytes to allocate 600d382aafbSBarry Smith 601d382aafbSBarry Smith Output Parameter: 602d382aafbSBarry Smith . result - memory allocated 603d382aafbSBarry Smith 604d382aafbSBarry Smith Level: beginner 605d382aafbSBarry Smith 60649d7da52SJed Brown Notes: 60749d7da52SJed Brown Memory is always allocated at least double aligned 608d382aafbSBarry Smith 60949d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 610d382aafbSBarry Smith 611d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 612d382aafbSBarry Smith 613d382aafbSBarry Smith M*/ 614071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 615d382aafbSBarry Smith 616d382aafbSBarry Smith /*MC 6173221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 6183221ece2SMatthew G. Knepley 6193221ece2SMatthew G. Knepley Synopsis: 6203221ece2SMatthew G. Knepley #include <petscsys.h> 6213221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 6223221ece2SMatthew G. Knepley 6233221ece2SMatthew G. Knepley Not Collective 6243221ece2SMatthew G. Knepley 6253221ece2SMatthew G. Knepley Input Parameters: 6263221ece2SMatthew G. Knepley + m - number of bytes to allocate 62792f119d6SBarry Smith - result - previous memory 6283221ece2SMatthew G. Knepley 6293221ece2SMatthew G. Knepley Output Parameter: 6303221ece2SMatthew G. Knepley . result - new memory allocated 6313221ece2SMatthew G. Knepley 6323221ece2SMatthew G. Knepley Level: developer 6333221ece2SMatthew G. Knepley 6343221ece2SMatthew G. Knepley Notes: 6353221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6363221ece2SMatthew G. Knepley 6373221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6383221ece2SMatthew G. Knepley 6393221ece2SMatthew G. Knepley M*/ 6403221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6413221ece2SMatthew G. Knepley 6423221ece2SMatthew G. Knepley /*MC 643503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 644d382aafbSBarry Smith 645d382aafbSBarry Smith Synopsis: 646aaa7dc30SBarry Smith #include <petscsys.h> 647d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 648d382aafbSBarry Smith 649eca87e8dSBarry Smith Not Collective 650eca87e8dSBarry Smith 651eca87e8dSBarry Smith Input Parameters: 652eca87e8dSBarry Smith . addr - address to align (any pointer type) 653eca87e8dSBarry Smith 654d382aafbSBarry Smith Level: developer 655d382aafbSBarry Smith 656d382aafbSBarry Smith .seealso: PetscMallocAlign() 657d382aafbSBarry Smith 658d382aafbSBarry Smith M*/ 659d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 660d382aafbSBarry Smith 661d382aafbSBarry Smith /*MC 6628f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6638f51dc47SJunchao Zhang 6648f51dc47SJunchao Zhang Synopsis: 6658f51dc47SJunchao Zhang #include <petscsys.h> 6668f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6678f51dc47SJunchao Zhang 6688f51dc47SJunchao Zhang Not Collective 6698f51dc47SJunchao Zhang 6708f51dc47SJunchao Zhang Input Parameter: 6718f51dc47SJunchao Zhang . m - number of bytes to allocate 6728f51dc47SJunchao Zhang 6738f51dc47SJunchao Zhang Output Parameter: 6748f51dc47SJunchao Zhang . result - memory allocated 6758f51dc47SJunchao Zhang 6768f51dc47SJunchao Zhang Level: beginner 6778f51dc47SJunchao Zhang 6788f51dc47SJunchao Zhang Notes: 6798f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6808f51dc47SJunchao Zhang 6818f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6828f51dc47SJunchao Zhang 6838f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6848f51dc47SJunchao Zhang 6858f51dc47SJunchao Zhang M*/ 6868f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6878f51dc47SJunchao Zhang 6888f51dc47SJunchao Zhang /*MC 689785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 690d382aafbSBarry Smith 691eca87e8dSBarry Smith Synopsis: 692aaa7dc30SBarry Smith #include <petscsys.h> 693785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 694785e854fSJed Brown 695785e854fSJed Brown Not Collective 696785e854fSJed Brown 697785e854fSJed Brown Input Parameter: 698390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 699785e854fSJed Brown 700785e854fSJed Brown Output Parameter: 7011fe1b817SJunchao Zhang . r1 - memory allocated 702785e854fSJed Brown 703e28ce29aSPatrick Sanan Note: 704e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 705390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 706390e1bf2SBarry Smith $ PetscInt *id; 707390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 708390e1bf2SBarry Smith not 709390e1bf2SBarry Smith $ PetscInt *id; 710390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 711390e1bf2SBarry Smith 7121fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 713390e1bf2SBarry Smith 714390e1bf2SBarry Smith Level: beginner 715785e854fSJed Brown 7161795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 717785e854fSJed Brown 718785e854fSJed Brown M*/ 7192553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 720785e854fSJed Brown 721785e854fSJed Brown /*MC 7221795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 7231795a4d1SJed Brown 7241795a4d1SJed Brown Synopsis: 725aaa7dc30SBarry Smith #include <petscsys.h> 7261795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 7271795a4d1SJed Brown 7281795a4d1SJed Brown Not Collective 7291795a4d1SJed Brown 7301795a4d1SJed Brown Input Parameter: 7311795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7321795a4d1SJed Brown 7331795a4d1SJed Brown Output Parameter: 7341fe1b817SJunchao Zhang . r1 - memory allocated 7351795a4d1SJed Brown 736e28ce29aSPatrick Sanan Notes: 737e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 738390e1bf2SBarry Smith 739390e1bf2SBarry Smith Level: beginner 7401795a4d1SJed Brown 7411795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7421795a4d1SJed Brown 7431795a4d1SJed Brown M*/ 7442553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7451795a4d1SJed Brown 7461795a4d1SJed Brown /*MC 747dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 748d382aafbSBarry Smith 749eca87e8dSBarry Smith Synopsis: 750aaa7dc30SBarry Smith #include <petscsys.h> 751dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 752eca87e8dSBarry Smith 753eca87e8dSBarry Smith Not Collective 754eca87e8dSBarry Smith 755d8d19677SJose E. Roman Input Parameters: 756d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 757dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 758d382aafbSBarry Smith 759d8d19677SJose E. Roman Output Parameters: 760d382aafbSBarry Smith + r1 - memory allocated in first chunk 761d382aafbSBarry Smith - r2 - memory allocated in second chunk 762d382aafbSBarry Smith 763d382aafbSBarry Smith Level: developer 764d382aafbSBarry Smith 7651795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 766d382aafbSBarry Smith 767d382aafbSBarry Smith M*/ 7682553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 769d382aafbSBarry Smith 770d382aafbSBarry Smith /*MC 7711795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 772d382aafbSBarry Smith 773eca87e8dSBarry Smith Synopsis: 774aaa7dc30SBarry Smith #include <petscsys.h> 7751795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 776eca87e8dSBarry Smith 777eca87e8dSBarry Smith Not Collective 778eca87e8dSBarry Smith 779d8d19677SJose E. Roman Input Parameters: 780d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7811795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7821795a4d1SJed Brown 783d8d19677SJose E. Roman Output Parameters: 7841795a4d1SJed Brown + r1 - memory allocated in first chunk 7851795a4d1SJed Brown - r2 - memory allocated in second chunk 7861795a4d1SJed Brown 7871795a4d1SJed Brown Level: developer 7881795a4d1SJed Brown 7891795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7901795a4d1SJed Brown 7911795a4d1SJed Brown M*/ 7922553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7931795a4d1SJed Brown 7941795a4d1SJed Brown /*MC 795dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 796d382aafbSBarry Smith 797d382aafbSBarry Smith Synopsis: 798aaa7dc30SBarry Smith #include <petscsys.h> 799dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 800d382aafbSBarry Smith 801d382aafbSBarry Smith Not Collective 802d382aafbSBarry Smith 803d8d19677SJose E. Roman Input Parameters: 804d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 805d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 806dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 807d382aafbSBarry Smith 808d8d19677SJose E. Roman Output Parameters: 809d382aafbSBarry Smith + r1 - memory allocated in first chunk 810d382aafbSBarry Smith . r2 - memory allocated in second chunk 811d382aafbSBarry Smith - r3 - memory allocated in third chunk 812d382aafbSBarry Smith 813d382aafbSBarry Smith Level: developer 814d382aafbSBarry Smith 8151795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 816d382aafbSBarry Smith 817d382aafbSBarry Smith M*/ 8182553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 819d382aafbSBarry Smith 820d382aafbSBarry Smith /*MC 8211795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 822d382aafbSBarry Smith 823eca87e8dSBarry Smith Synopsis: 824aaa7dc30SBarry Smith #include <petscsys.h> 8251795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 826eca87e8dSBarry Smith 827eca87e8dSBarry Smith Not Collective 828eca87e8dSBarry Smith 829d8d19677SJose E. Roman Input Parameters: 830d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 831d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8321795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8331795a4d1SJed Brown 834d8d19677SJose E. Roman Output Parameters: 8351795a4d1SJed Brown + r1 - memory allocated in first chunk 8361795a4d1SJed Brown . r2 - memory allocated in second chunk 8371795a4d1SJed Brown - r3 - memory allocated in third chunk 8381795a4d1SJed Brown 8391795a4d1SJed Brown Level: developer 8401795a4d1SJed Brown 8411795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8421795a4d1SJed Brown 8431795a4d1SJed Brown M*/ 8442553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8451795a4d1SJed Brown 8461795a4d1SJed Brown /*MC 847dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 848d382aafbSBarry Smith 849d382aafbSBarry Smith Synopsis: 850aaa7dc30SBarry Smith #include <petscsys.h> 851dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 852d382aafbSBarry Smith 853d382aafbSBarry Smith Not Collective 854d382aafbSBarry Smith 855d8d19677SJose E. Roman Input Parameters: 856d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 857d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 858d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 859dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 860d382aafbSBarry Smith 861d8d19677SJose E. Roman Output Parameters: 862d382aafbSBarry Smith + r1 - memory allocated in first chunk 863d382aafbSBarry Smith . r2 - memory allocated in second chunk 864d382aafbSBarry Smith . r3 - memory allocated in third chunk 865d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 866d382aafbSBarry Smith 867d382aafbSBarry Smith Level: developer 868d382aafbSBarry Smith 8691795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 870d382aafbSBarry Smith 871d382aafbSBarry Smith M*/ 8722553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 873d382aafbSBarry Smith 874d382aafbSBarry Smith /*MC 8751795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 876d382aafbSBarry Smith 877eca87e8dSBarry Smith Synopsis: 878aaa7dc30SBarry Smith #include <petscsys.h> 8791795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 880eca87e8dSBarry Smith 881eca87e8dSBarry Smith Not Collective 882eca87e8dSBarry Smith 883e28ce29aSPatrick Sanan Input Parameters: 884d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 885d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 886d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8871795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8881795a4d1SJed Brown 889e28ce29aSPatrick Sanan Output Parameters: 8901795a4d1SJed Brown + r1 - memory allocated in first chunk 8911795a4d1SJed Brown . r2 - memory allocated in second chunk 8921795a4d1SJed Brown . r3 - memory allocated in third chunk 8931795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8941795a4d1SJed Brown 8951795a4d1SJed Brown Level: developer 8961795a4d1SJed Brown 8971795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8981795a4d1SJed Brown 8991795a4d1SJed Brown M*/ 9002553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 9011795a4d1SJed Brown 9021795a4d1SJed Brown /*MC 903dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 904d382aafbSBarry Smith 905d382aafbSBarry Smith Synopsis: 906aaa7dc30SBarry Smith #include <petscsys.h> 907dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 908d382aafbSBarry Smith 909d382aafbSBarry Smith Not Collective 910d382aafbSBarry Smith 911e28ce29aSPatrick Sanan Input Parameters: 912d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 913d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 914d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 915d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 916dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 917d382aafbSBarry Smith 918e28ce29aSPatrick Sanan Output Parameters: 919d382aafbSBarry Smith + r1 - memory allocated in first chunk 920d382aafbSBarry Smith . r2 - memory allocated in second chunk 921d382aafbSBarry Smith . r3 - memory allocated in third chunk 922d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 923d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 924d382aafbSBarry Smith 925d382aafbSBarry Smith Level: developer 926d382aafbSBarry Smith 9271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 928d382aafbSBarry Smith 929d382aafbSBarry Smith M*/ 9302553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 931d382aafbSBarry Smith 932d382aafbSBarry Smith /*MC 9331795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 934d382aafbSBarry Smith 935eca87e8dSBarry Smith Synopsis: 936aaa7dc30SBarry Smith #include <petscsys.h> 9371795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 938eca87e8dSBarry Smith 939eca87e8dSBarry Smith Not Collective 940eca87e8dSBarry Smith 941e28ce29aSPatrick Sanan Input Parameters: 942d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 943d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 944d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 945d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9461795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9471795a4d1SJed Brown 948e28ce29aSPatrick Sanan Output Parameters: 9491795a4d1SJed Brown + r1 - memory allocated in first chunk 9501795a4d1SJed Brown . r2 - memory allocated in second chunk 9511795a4d1SJed Brown . r3 - memory allocated in third chunk 9521795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9531795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9541795a4d1SJed Brown 9551795a4d1SJed Brown Level: developer 9561795a4d1SJed Brown 9571795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9581795a4d1SJed Brown 9591795a4d1SJed Brown M*/ 9602553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 961d382aafbSBarry Smith 962d382aafbSBarry Smith /*MC 963dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 964d382aafbSBarry Smith 965d382aafbSBarry Smith Synopsis: 966aaa7dc30SBarry Smith #include <petscsys.h> 967dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 968d382aafbSBarry Smith 969d382aafbSBarry Smith Not Collective 970d382aafbSBarry Smith 971e28ce29aSPatrick Sanan Input Parameters: 972d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 973d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 974d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 975d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 976d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 977dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 978d382aafbSBarry Smith 979e28ce29aSPatrick Sanan Output Parameteasr: 980d382aafbSBarry Smith + r1 - memory allocated in first chunk 981d382aafbSBarry Smith . r2 - memory allocated in second chunk 982d382aafbSBarry Smith . r3 - memory allocated in third chunk 983d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 984d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 985d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 986d382aafbSBarry Smith 987d382aafbSBarry Smith Level: developer 988d382aafbSBarry Smith 9891795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 990d382aafbSBarry Smith 991d382aafbSBarry Smith M*/ 9922553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 993d382aafbSBarry Smith 994d382aafbSBarry Smith /*MC 9951795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 996d382aafbSBarry Smith 997eca87e8dSBarry Smith Synopsis: 998aaa7dc30SBarry Smith #include <petscsys.h> 9991795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 1000eca87e8dSBarry Smith 1001eca87e8dSBarry Smith Not Collective 1002eca87e8dSBarry Smith 1003e28ce29aSPatrick Sanan Input Parameters: 1004d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1005d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1006d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1007d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1008d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 10091795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 10101795a4d1SJed Brown 1011e28ce29aSPatrick Sanan Output Parameters: 10121795a4d1SJed Brown + r1 - memory allocated in first chunk 10131795a4d1SJed Brown . r2 - memory allocated in second chunk 10141795a4d1SJed Brown . r3 - memory allocated in third chunk 10151795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10161795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10171795a4d1SJed Brown - r6 - memory allocated in sixth chunk 10181795a4d1SJed Brown 10191795a4d1SJed Brown Level: developer 10201795a4d1SJed Brown 10211795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 10221795a4d1SJed Brown 10231795a4d1SJed Brown M*/ 10242553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 10251795a4d1SJed Brown 10261795a4d1SJed Brown /*MC 1027dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 1028d382aafbSBarry Smith 1029d382aafbSBarry Smith Synopsis: 1030aaa7dc30SBarry Smith #include <petscsys.h> 1031dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1032d382aafbSBarry Smith 1033d382aafbSBarry Smith Not Collective 1034d382aafbSBarry Smith 1035e28ce29aSPatrick Sanan Input Parameters: 1036d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1037d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1038d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1039d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1040d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1041d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1042dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1043d382aafbSBarry Smith 1044e28ce29aSPatrick Sanan Output Parameters: 1045d382aafbSBarry Smith + r1 - memory allocated in first chunk 1046d382aafbSBarry Smith . r2 - memory allocated in second chunk 1047d382aafbSBarry Smith . r3 - memory allocated in third chunk 1048d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1049d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1050d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1051eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith Level: developer 1054d382aafbSBarry Smith 10551795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1056d382aafbSBarry Smith 1057d382aafbSBarry Smith M*/ 10582553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1059d382aafbSBarry Smith 1060d382aafbSBarry Smith /*MC 10611795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10621795a4d1SJed Brown 10631795a4d1SJed Brown Synopsis: 1064aaa7dc30SBarry Smith #include <petscsys.h> 10651795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10661795a4d1SJed Brown 10671795a4d1SJed Brown Not Collective 10681795a4d1SJed Brown 1069e28ce29aSPatrick Sanan Input Parameters: 10701795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10711795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10721795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10731795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10741795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10751795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10761795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10771795a4d1SJed Brown 1078e28ce29aSPatrick Sanan Output Parameters: 10791795a4d1SJed Brown + r1 - memory allocated in first chunk 10801795a4d1SJed Brown . r2 - memory allocated in second chunk 10811795a4d1SJed Brown . r3 - memory allocated in third chunk 10821795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10831795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10841795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10851795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10861795a4d1SJed Brown 10871795a4d1SJed Brown Level: developer 10881795a4d1SJed Brown 10891795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10901795a4d1SJed Brown 10911795a4d1SJed Brown M*/ 10922553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10931795a4d1SJed Brown 10941795a4d1SJed Brown /*MC 1095503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1096d382aafbSBarry Smith 1097eca87e8dSBarry Smith Synopsis: 1098aaa7dc30SBarry Smith #include <petscsys.h> 1099b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1100eca87e8dSBarry Smith 1101eca87e8dSBarry Smith Not Collective 1102eca87e8dSBarry Smith 1103d382aafbSBarry Smith Output Parameter: 1104b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1105d382aafbSBarry Smith 1106d382aafbSBarry Smith Level: beginner 1107d382aafbSBarry Smith 1108390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1109d382aafbSBarry Smith 1110d382aafbSBarry Smith M*/ 1111b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1112ad0619ddSBarry Smith 1113ad0619ddSBarry Smith /*MC 1114b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1115ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1116ad0619ddSBarry Smith 1117ad0619ddSBarry Smith Synopsis: 1118aaa7dc30SBarry Smith #include <petscsys.h> 1119b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1120ad0619ddSBarry Smith 1121ad0619ddSBarry Smith Not Collective 1122ad0619ddSBarry Smith 1123ad0619ddSBarry Smith Input Parameter: 1124b00a9115SJed Brown . obj - object memory is logged to 1125ad0619ddSBarry Smith 1126ad0619ddSBarry Smith Output Parameter: 1127b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1128ad0619ddSBarry Smith 1129ad0619ddSBarry Smith Level: developer 1130ad0619ddSBarry Smith 1131390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1132ad0619ddSBarry Smith 1133ad0619ddSBarry Smith M*/ 1134d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1135d382aafbSBarry Smith 1136d382aafbSBarry Smith /*MC 1137d382aafbSBarry Smith PetscFree - Frees memory 1138d382aafbSBarry Smith 1139eca87e8dSBarry Smith Synopsis: 1140aaa7dc30SBarry Smith #include <petscsys.h> 1141eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1142eca87e8dSBarry Smith 1143eca87e8dSBarry Smith Not Collective 1144eca87e8dSBarry Smith 1145d382aafbSBarry Smith Input Parameter: 11467f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1147d382aafbSBarry Smith 1148d382aafbSBarry Smith Level: beginner 1149d382aafbSBarry Smith 115049d7da52SJed Brown Notes: 1151390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1152390e1bf2SBarry Smith 115349d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1154d382aafbSBarry Smith 1155390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1156d382aafbSBarry Smith 1157d382aafbSBarry Smith M*/ 1158ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1159d382aafbSBarry Smith 1160d382aafbSBarry Smith /*MC 1161d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1162d382aafbSBarry Smith 1163eca87e8dSBarry Smith Synopsis: 1164aaa7dc30SBarry Smith #include <petscsys.h> 1165eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1166eca87e8dSBarry Smith 1167eca87e8dSBarry Smith Not Collective 1168eca87e8dSBarry Smith 1169e28ce29aSPatrick Sanan Input Parameters: 1170d382aafbSBarry Smith + memory1 - memory to free 1171d382aafbSBarry Smith - memory2 - 2nd memory to free 1172d382aafbSBarry Smith 1173d382aafbSBarry Smith Level: developer 1174d382aafbSBarry Smith 117595452b02SPatrick Sanan Notes: 117695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1179d382aafbSBarry Smith 1180d382aafbSBarry Smith M*/ 1181ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1182d382aafbSBarry Smith 1183d382aafbSBarry Smith /*MC 1184d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1185d382aafbSBarry Smith 1186eca87e8dSBarry Smith Synopsis: 1187aaa7dc30SBarry Smith #include <petscsys.h> 1188eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1189eca87e8dSBarry Smith 1190eca87e8dSBarry Smith Not Collective 1191eca87e8dSBarry Smith 1192e28ce29aSPatrick Sanan Input Parameters: 1193d382aafbSBarry Smith + memory1 - memory to free 1194d382aafbSBarry Smith . memory2 - 2nd memory to free 1195d382aafbSBarry Smith - memory3 - 3rd memory to free 1196d382aafbSBarry Smith 1197d382aafbSBarry Smith Level: developer 1198d382aafbSBarry Smith 119995452b02SPatrick Sanan Notes: 120095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1201d382aafbSBarry Smith 1202d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith M*/ 1205ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1206d382aafbSBarry Smith 1207d382aafbSBarry Smith /*MC 1208d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1209d382aafbSBarry Smith 1210eca87e8dSBarry Smith Synopsis: 1211aaa7dc30SBarry Smith #include <petscsys.h> 1212eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1213eca87e8dSBarry Smith 1214eca87e8dSBarry Smith Not Collective 1215eca87e8dSBarry Smith 1216e28ce29aSPatrick Sanan Input Parameters: 1217d382aafbSBarry Smith + m1 - memory to free 1218d382aafbSBarry Smith . m2 - 2nd memory to free 1219d382aafbSBarry Smith . m3 - 3rd memory to free 1220d382aafbSBarry Smith - m4 - 4th memory to free 1221d382aafbSBarry Smith 1222d382aafbSBarry Smith Level: developer 1223d382aafbSBarry Smith 122495452b02SPatrick Sanan Notes: 122595452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1226d382aafbSBarry Smith 1227d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith M*/ 1230ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1231d382aafbSBarry Smith 1232d382aafbSBarry Smith /*MC 1233d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1234d382aafbSBarry Smith 1235eca87e8dSBarry Smith Synopsis: 1236aaa7dc30SBarry Smith #include <petscsys.h> 1237eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1238eca87e8dSBarry Smith 1239eca87e8dSBarry Smith Not Collective 1240eca87e8dSBarry Smith 1241e28ce29aSPatrick Sanan Input Parameters: 1242d382aafbSBarry Smith + m1 - memory to free 1243d382aafbSBarry Smith . m2 - 2nd memory to free 1244d382aafbSBarry Smith . m3 - 3rd memory to free 1245d382aafbSBarry Smith . m4 - 4th memory to free 1246d382aafbSBarry Smith - m5 - 5th memory to free 1247d382aafbSBarry Smith 1248d382aafbSBarry Smith Level: developer 1249d382aafbSBarry Smith 125095452b02SPatrick Sanan Notes: 125195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1252d382aafbSBarry Smith 1253d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1254d382aafbSBarry Smith 1255d382aafbSBarry Smith M*/ 1256ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1257d382aafbSBarry Smith 1258d382aafbSBarry Smith /*MC 1259d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1260d382aafbSBarry Smith 1261eca87e8dSBarry Smith Synopsis: 1262aaa7dc30SBarry Smith #include <petscsys.h> 1263eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1264eca87e8dSBarry Smith 1265eca87e8dSBarry Smith Not Collective 1266eca87e8dSBarry Smith 1267e28ce29aSPatrick Sanan Input Parameters: 1268d382aafbSBarry Smith + m1 - memory to free 1269d382aafbSBarry Smith . m2 - 2nd memory to free 1270d382aafbSBarry Smith . m3 - 3rd memory to free 1271d382aafbSBarry Smith . m4 - 4th memory to free 1272d382aafbSBarry Smith . m5 - 5th memory to free 1273d382aafbSBarry Smith - m6 - 6th memory to free 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith Level: developer 1276d382aafbSBarry Smith 127795452b02SPatrick Sanan Notes: 127895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1279d382aafbSBarry Smith 1280d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1281d382aafbSBarry Smith 1282d382aafbSBarry Smith M*/ 1283ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1284d382aafbSBarry Smith 1285d382aafbSBarry Smith /*MC 1286d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1287d382aafbSBarry Smith 1288eca87e8dSBarry Smith Synopsis: 1289aaa7dc30SBarry Smith #include <petscsys.h> 1290eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1291eca87e8dSBarry Smith 1292eca87e8dSBarry Smith Not Collective 1293eca87e8dSBarry Smith 1294e28ce29aSPatrick Sanan Input Parameters: 1295d382aafbSBarry Smith + m1 - memory to free 1296d382aafbSBarry Smith . m2 - 2nd memory to free 1297d382aafbSBarry Smith . m3 - 3rd memory to free 1298d382aafbSBarry Smith . m4 - 4th memory to free 1299d382aafbSBarry Smith . m5 - 5th memory to free 1300d382aafbSBarry Smith . m6 - 6th memory to free 1301d382aafbSBarry Smith - m7 - 7th memory to free 1302d382aafbSBarry Smith 1303d382aafbSBarry Smith Level: developer 1304d382aafbSBarry Smith 130595452b02SPatrick Sanan Notes: 130695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1309d382aafbSBarry Smith PetscMalloc7() 1310d382aafbSBarry Smith 1311d382aafbSBarry Smith M*/ 1312ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1313d382aafbSBarry Smith 1314ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1315ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1316071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1317efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 13183221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1319ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 132092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1322d382aafbSBarry Smith 1323d382aafbSBarry Smith /* 1324c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1325c1706be6SHong Zhang */ 1326c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1327c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 132831f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 132931f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 133031f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 133131f06eaaSHong Zhang #endif 133259af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 133359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 133459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 133559af0bd3SScott Kruger #endif 133659af0bd3SScott Kruger 1337a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 133836763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1339a5057860SBarry Smith 1340a5057860SBarry Smith /* 134166d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1342d382aafbSBarry Smith */ 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 134492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1347e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1348e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 134992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 135092f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1351efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 135292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 135392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1354608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1355608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1356d382aafbSBarry Smith 13576a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13618e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1362d382aafbSBarry Smith 1363d382aafbSBarry Smith /* 1364d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1365d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1366d382aafbSBarry Smith functionality and/or error checking. 1367d382aafbSBarry Smith */ 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1370d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1375014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1376014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1378a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1381014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13822f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13872c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 139047340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13916fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13926991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13936991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1395d382aafbSBarry Smith 1396573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1397573b0fb4SBarry Smith 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1401d382aafbSBarry Smith 1402e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1403a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1404a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1405a53986e1SJed Brown 1406d382aafbSBarry Smith /* 1407d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1408d382aafbSBarry Smith */ 1409367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1410570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1411de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1412014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1413014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1414d9822059SBarry Smith #else 1415de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1416d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1417d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1418d9822059SBarry Smith #endif 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1420d382aafbSBarry Smith 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1423eb3f98d2SBarry Smith 142495c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1425d6a4318aSJed Brown 1426639ff905SBarry Smith /* 1427639ff905SBarry Smith Defines PETSc error handling. 1428639ff905SBarry Smith */ 1429639ff905SBarry Smith #include <petscerror.h> 1430d382aafbSBarry Smith 14310700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1432014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1433014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 143581256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 143681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 143781256985SMatthew G. Knepley 1438d382aafbSBarry Smith /* 1439d382aafbSBarry Smith Routines that get memory usage information from the OS 1440d382aafbSBarry Smith */ 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1444b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1445d382aafbSBarry Smith 1446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1447d382aafbSBarry Smith 1448d382aafbSBarry Smith /* 1449d382aafbSBarry Smith Initialization of PETSc 1450d382aafbSBarry Smith */ 1451014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1452014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1453014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1461d382aafbSBarry Smith 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1463607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1464d382aafbSBarry Smith 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1469d382aafbSBarry Smith 1470a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1471a50e088cSMatthew G. Knepley 1472d382aafbSBarry Smith /* 1473d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14742981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1475d382aafbSBarry Smith */ 1476638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1477638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1478638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1479d382aafbSBarry Smith 1480d382aafbSBarry Smith /* 1481d382aafbSBarry Smith Functions that can act on any PETSc object. 1482d382aafbSBarry Smith */ 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1501bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1502bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 15050eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 15060eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1508d382aafbSBarry Smith 1509665c2dedSJed Brown #include <petscviewertypes.h> 1510639ff905SBarry Smith #include <petscoptions.h> 1511639ff905SBarry Smith 1512608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1513608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1514608c71bfSMatthew G. Knepley 15150633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 15160633abcbSJed Brown 1517c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1518dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1519639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 15200005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 15210005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1529685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15324099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1534b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1535014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1537d382aafbSBarry Smith 1538e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15397aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1540e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1541e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1542e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1543e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1544e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1545e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1546e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1547e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1548e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 154915681b3cSBarry Smith 1550ec7429eaSBarry Smith #else 15517aab2a10SBarry Smith #define PetscSAWsBlock() 0 1552e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1553e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1554e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1555e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1556e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1557e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1558e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1559e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1560e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 156115681b3cSBarry Smith 1562ec7429eaSBarry Smith #endif 1563b90c6cbeSBarry Smith 156482b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 156582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 156682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1567258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1568258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1569258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1570258ec3d2SMatthew G. Knepley #endif 15717d5d4d99SBarry Smith 15725fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1573a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15745fe58b6fSBarry Smith #endif 15757eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1576a64a8e02SBarry Smith 1577140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1578140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1579140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1580140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1581140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1582140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1583d382aafbSBarry Smith 1584d382aafbSBarry Smith /* 1585503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1586d382aafbSBarry Smith link libraries that will be loaded as needed. 1587d382aafbSBarry Smith */ 1588a240a19fSJed Brown 1589a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1590a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1591140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15921c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15931c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 159444ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1595140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1596140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1597140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1598d382aafbSBarry Smith 1599014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1600014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1601014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1607d382aafbSBarry Smith 1608d382aafbSBarry Smith /* 1609d382aafbSBarry Smith Useful utility routines 1610d382aafbSBarry Smith */ 1611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1613d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1617014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1618dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1619dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1620d382aafbSBarry Smith 162164ac3b0dSPatrick Sanan /*MC 1622ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1623503cfb0cSBarry Smith 1624e28ce29aSPatrick Sanan Notes: 1625e28ce29aSPatrick Sanan This is useful in cases like 1626503cfb0cSBarry Smith $ int *a; 1627ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16281cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 162964ac3b0dSPatrick Sanan 163064ac3b0dSPatrick Sanan Level: beginner 163164ac3b0dSPatrick Sanan 163264ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 163364ac3b0dSPatrick Sanan M*/ 1634d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1635503cfb0cSBarry Smith 1636d382aafbSBarry Smith /*MC 1637d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1638d382aafbSBarry Smith 1639d382aafbSBarry Smith Synopsis: 1640aaa7dc30SBarry Smith #include <petscsys.h> 1641659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1642d382aafbSBarry Smith 1643659f7ba0SBarry Smith Collective on comm 1644eca87e8dSBarry Smith 1645d382aafbSBarry Smith Input Parameters: 1646659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1647d382aafbSBarry Smith . format - the usual printf() format string 1648659f7ba0SBarry Smith - args - arguments to be printed 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith Level: developer 1651d382aafbSBarry Smith 1652d382aafbSBarry Smith Fortran Note: 1653d382aafbSBarry Smith This routine is not supported in Fortran. 1654d382aafbSBarry Smith 1655659f7ba0SBarry Smith Note: 1656659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1657659f7ba0SBarry Smith 1658659f7ba0SBarry Smith To use, write your own function, for example, 1659659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1660659f7ba0SBarry Smith ${ 1661659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1662659f7ba0SBarry Smith $} 1663659f7ba0SBarry Smith then do the assigment 1664659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1665659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1666659f7ba0SBarry Smith 1667659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1668d382aafbSBarry Smith 1669d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1670d382aafbSBarry Smith M*/ 1671014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1672d382aafbSBarry Smith 1673fcfd50ebSBarry Smith /* 1674fcfd50ebSBarry Smith Defines PETSc profiling. 1675fcfd50ebSBarry Smith */ 16762c8e378dSBarry Smith #include <petsclog.h> 1677fcfd50ebSBarry Smith 1678fcfd50ebSBarry Smith /* 1679fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1680fcfd50ebSBarry Smith */ 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1683014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1684014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16881b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1689fcfd50ebSBarry Smith 1690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1693d382aafbSBarry Smith 1694d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1695d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1696d781fa04SBarry Smith 1697d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1699016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 170074ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1701d382aafbSBarry Smith #endif 1702d382aafbSBarry Smith 1703014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1704014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 17050ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1706014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1707014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1708014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1709014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1710d382aafbSBarry Smith 1711014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1712014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1713014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1714014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1715014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1716014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1717b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1718d382aafbSBarry Smith 1719d382aafbSBarry Smith /* 1720d382aafbSBarry Smith For use in debuggers 1721d382aafbSBarry Smith */ 1722014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1723014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1724014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1725014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1726014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1727d382aafbSBarry Smith 1728a663daf8SBarry Smith #include <stddef.h> 1729a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1730d382aafbSBarry Smith #include <stdlib.h> 17316c7e564aSBarry Smith 17324a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1733d382aafbSBarry Smith #include <xmmintrin.h> 1734d382aafbSBarry Smith #endif 1735d382aafbSBarry Smith 1736d382aafbSBarry Smith /*@C 1737580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1738580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1739580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1740580bdb30SBarry Smith 1741580bdb30SBarry Smith Not Collective 1742580bdb30SBarry Smith 1743580bdb30SBarry Smith Input Parameters: 1744580bdb30SBarry Smith + b - pointer to initial memory space 1745580bdb30SBarry Smith . a - pointer to copy space 1746580bdb30SBarry Smith - n - length (in bytes) of space to copy 1747580bdb30SBarry Smith 1748580bdb30SBarry Smith Level: intermediate 1749580bdb30SBarry Smith 1750580bdb30SBarry Smith Note: 1751857a15f1SBarry Smith PetscArraymove() is preferred 1752580bdb30SBarry Smith This routine is analogous to memmove(). 1753580bdb30SBarry Smith 1754580bdb30SBarry Smith Developers Note: This is inlined for performance 1755580bdb30SBarry Smith 1756580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1757580bdb30SBarry Smith PetscArraymove() 1758580bdb30SBarry Smith @*/ 1759580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1760580bdb30SBarry Smith { 1761580bdb30SBarry Smith PetscFunctionBegin; 1762580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1763580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1764580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1765580bdb30SBarry Smith if (a < b) { 1766580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1767580bdb30SBarry Smith else { 1768580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1769580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1770580bdb30SBarry Smith } 1771580bdb30SBarry Smith } else { 1772580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1773580bdb30SBarry Smith else { 1774580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1775580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1776580bdb30SBarry Smith } 1777580bdb30SBarry Smith } 1778580bdb30SBarry Smith #else 1779580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1780580bdb30SBarry Smith #endif 1781580bdb30SBarry Smith PetscFunctionReturn(0); 1782580bdb30SBarry Smith } 1783580bdb30SBarry Smith 1784d382aafbSBarry Smith /*@C 1785d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1786d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1787d382aafbSBarry Smith PetscMemmove() in that case. 1788d382aafbSBarry Smith 1789d382aafbSBarry Smith Not Collective 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith Input Parameters: 1792d382aafbSBarry Smith + b - pointer to initial memory space 1793d382aafbSBarry Smith - n - length (in bytes) of space to copy 1794d382aafbSBarry Smith 1795d382aafbSBarry Smith Output Parameter: 1796d382aafbSBarry Smith . a - pointer to copy space 1797d382aafbSBarry Smith 1798d382aafbSBarry Smith Level: intermediate 1799d382aafbSBarry Smith 1800d382aafbSBarry Smith Compile Option: 1801d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1802d382aafbSBarry Smith for memory copies on double precision values. 1803d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1804d382aafbSBarry Smith for memory copies on double precision values. 1805d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1806d382aafbSBarry Smith for memory copies on double precision values. 1807d382aafbSBarry Smith 1808d382aafbSBarry Smith Note: 1809580bdb30SBarry Smith Prefer PetscArraycpy() 1810d382aafbSBarry Smith This routine is analogous to memcpy(). 18111fd49c25SBarry Smith Not available from Fortran 18121fd49c25SBarry Smith 1813f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1814f5f57ec0SBarry Smith 1815580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1816d382aafbSBarry Smith 1817d382aafbSBarry Smith @*/ 18187087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1819d382aafbSBarry Smith { 1820d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1821c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1822c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1823a7e36092SMatthew G Knepley PetscFunctionBegin; 1824e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1825e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1826a7e36092SMatthew G Knepley #else 1827d382aafbSBarry Smith PetscFunctionBegin; 1828a7e36092SMatthew G Knepley #endif 1829a47a537aSLisandro Dalcin if (a != b && n > 0) { 1830d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1831e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1832d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1833d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1834d382aafbSBarry Smith #endif 1835d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1836c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1837d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1838d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1839c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1840c5df96a5SBarry Smith PetscErrorCode ierr; 1841c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18428b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1843d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1844d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1845d382aafbSBarry Smith #else 1846d382aafbSBarry Smith size_t i; 1847d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1848d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1849d382aafbSBarry Smith #endif 1850d382aafbSBarry Smith } else { 1851d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1852d382aafbSBarry Smith } 1853d382aafbSBarry Smith #else 1854d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1855d382aafbSBarry Smith #endif 1856d382aafbSBarry Smith } 1857d382aafbSBarry Smith PetscFunctionReturn(0); 1858d382aafbSBarry Smith } 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith /*@C 1861d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1862d382aafbSBarry Smith 1863d382aafbSBarry Smith Not Collective 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith Input Parameters: 1866d382aafbSBarry Smith + a - pointer to beginning memory location 1867d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith Level: intermediate 1870d382aafbSBarry Smith 1871d382aafbSBarry Smith Compile Option: 1872d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1873d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1874d382aafbSBarry Smith 18751fd49c25SBarry Smith Not available from Fortran 1876857a15f1SBarry Smith Prefer PetscArrayzero() 18771fd49c25SBarry Smith 1878503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1879503cfb0cSBarry Smith 1880580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1881d382aafbSBarry Smith @*/ 18827087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1883d382aafbSBarry Smith { 1884d382aafbSBarry Smith if (n > 0) { 1885d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 188618703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1887d382aafbSBarry Smith #endif 1888d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1889d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1890d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1891d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1892d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1893d382aafbSBarry Smith } else { 1894d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1895d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1896d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1897d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1898d382aafbSBarry Smith } else { 1899d382aafbSBarry Smith #endif 1900d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1901d382aafbSBarry Smith bzero((char *)a,n); 1902d382aafbSBarry Smith #else 1903d382aafbSBarry Smith memset((char*)a,0,n); 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1906d382aafbSBarry Smith } 1907d382aafbSBarry Smith #endif 1908d382aafbSBarry Smith } 1909d382aafbSBarry Smith return 0; 1910d382aafbSBarry Smith } 1911d382aafbSBarry Smith 1912d382aafbSBarry Smith /*MC 1913580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1914580bdb30SBarry Smith 1915580bdb30SBarry Smith Synopsis: 1916580bdb30SBarry Smith #include <petscsys.h> 1917580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1918580bdb30SBarry Smith 1919580bdb30SBarry Smith Not Collective 1920580bdb30SBarry Smith 1921580bdb30SBarry Smith Input Parameters: 1922580bdb30SBarry Smith + str1 - First array 1923580bdb30SBarry Smith . str2 - Second array 1924580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1925580bdb30SBarry Smith 1926580bdb30SBarry Smith Output Parameters: 1927580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1928580bdb30SBarry Smith 1929580bdb30SBarry Smith Level: intermediate 1930580bdb30SBarry Smith 1931580bdb30SBarry Smith Note: 1932857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1933580bdb30SBarry Smith The arrays must be of the same type 1934580bdb30SBarry Smith 1935580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1936580bdb30SBarry Smith PetscArraymove() 1937580bdb30SBarry Smith M*/ 19389e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1939580bdb30SBarry Smith 19408f8f2f0dSBarry Smith /*MC 1941580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1942580bdb30SBarry Smith do not overlap 1943580bdb30SBarry Smith 1944580bdb30SBarry Smith Synopsis: 1945580bdb30SBarry Smith #include <petscsys.h> 1946580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1947580bdb30SBarry Smith 1948580bdb30SBarry Smith Not Collective 1949580bdb30SBarry Smith 1950580bdb30SBarry Smith Input Parameters: 1951580bdb30SBarry Smith + str1 - First array 1952580bdb30SBarry Smith . str2 - Second array 1953580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1954580bdb30SBarry Smith 1955580bdb30SBarry Smith Level: intermediate 1956580bdb30SBarry Smith 1957580bdb30SBarry Smith Note: 1958857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1959580bdb30SBarry Smith The arrays must be of the same type 1960580bdb30SBarry Smith 1961580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1962580bdb30SBarry Smith M*/ 19639e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1964580bdb30SBarry Smith 19658f8f2f0dSBarry Smith /*MC 1966580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1967580bdb30SBarry Smith 1968580bdb30SBarry Smith Synopsis: 1969580bdb30SBarry Smith #include <petscsys.h> 1970580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1971580bdb30SBarry Smith 1972580bdb30SBarry Smith Not Collective 1973580bdb30SBarry Smith 1974580bdb30SBarry Smith Input Parameters: 1975de25709eSStefano Zampini + str1 - First array (destination) 1976de25709eSStefano Zampini . str2 - Second array (source) 1977580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1978580bdb30SBarry Smith 1979580bdb30SBarry Smith Level: intermediate 1980580bdb30SBarry Smith 1981580bdb30SBarry Smith Note: 1982857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1983580bdb30SBarry Smith The arrays must be of the same type 1984580bdb30SBarry Smith 1985580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1986580bdb30SBarry Smith M*/ 19879e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1988580bdb30SBarry Smith 19898f8f2f0dSBarry Smith /*MC 1990580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1991580bdb30SBarry Smith 1992580bdb30SBarry Smith Synopsis: 1993580bdb30SBarry Smith #include <petscsys.h> 1994580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1995580bdb30SBarry Smith 1996580bdb30SBarry Smith Not Collective 1997580bdb30SBarry Smith 1998580bdb30SBarry Smith Input Parameters: 1999580bdb30SBarry Smith + str1 - array 2000580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 2001580bdb30SBarry Smith 2002580bdb30SBarry Smith Level: intermediate 2003580bdb30SBarry Smith 2004580bdb30SBarry Smith Note: 2005857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 2006580bdb30SBarry Smith 2007580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 2008580bdb30SBarry Smith M*/ 20099e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 2010580bdb30SBarry Smith 2011d382aafbSBarry Smith /*MC 2012d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 2013d382aafbSBarry Smith 2014eca87e8dSBarry Smith Synopsis: 2015aaa7dc30SBarry Smith #include <petscsys.h> 2016eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 2017eca87e8dSBarry Smith 2018d382aafbSBarry Smith Not Collective 2019d382aafbSBarry Smith 2020d382aafbSBarry Smith Input Parameters: 2021d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 2022d382aafbSBarry Smith . n - number of elements to fetch 2023d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 202450d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 2025d382aafbSBarry Smith 2026d382aafbSBarry Smith Level: developer 2027d382aafbSBarry Smith 2028d382aafbSBarry Smith Notes: 2029d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2030d382aafbSBarry Smith 203150d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 203250d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 203350d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 203463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 203563cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 203663cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2037d382aafbSBarry Smith 2038d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2039d382aafbSBarry Smith address). 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith M*/ 2042d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2043d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2044d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2045d382aafbSBarry Smith } while (0) 2046d382aafbSBarry Smith 2047d382aafbSBarry Smith /* 2048d382aafbSBarry Smith Determine if some of the kernel computation routines use 2049d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2050d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2051d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2052e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2053d382aafbSBarry Smith */ 2054d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2055d382aafbSBarry Smith 2056d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2057d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2058d382aafbSBarry Smith #endif 2059d382aafbSBarry Smith 20605a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20615a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2062d382aafbSBarry Smith #endif 2063d382aafbSBarry Smith 2064d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2065d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2066d382aafbSBarry Smith #endif 2067d382aafbSBarry Smith 2068d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2069d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2070d382aafbSBarry Smith #endif 2071d382aafbSBarry Smith 2072d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2073d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2074d382aafbSBarry Smith #endif 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2077d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2078d382aafbSBarry Smith #endif 2079d382aafbSBarry Smith 2080d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2081d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2082d382aafbSBarry Smith #endif 2083d382aafbSBarry Smith 2084d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2085d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2086d382aafbSBarry Smith #endif 2087d382aafbSBarry Smith 2088d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2089d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2090d382aafbSBarry Smith #endif 2091d382aafbSBarry Smith 2092d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2093d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2094d382aafbSBarry Smith #endif 2095d382aafbSBarry Smith 2096d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2097d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2098d382aafbSBarry Smith #endif 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2101d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2102d382aafbSBarry Smith #endif 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2105d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2106d382aafbSBarry Smith #endif 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2109d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2110d382aafbSBarry Smith #endif 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith #endif 2113d382aafbSBarry Smith 2114d382aafbSBarry Smith /* 2115d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2116d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2117d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2118d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2119d382aafbSBarry Smith ugly extern "C" {} wrappers. 2120d382aafbSBarry Smith */ 2121d382aafbSBarry Smith #if defined(__cplusplus) 2122d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2123d382aafbSBarry Smith # define EXTERN_C_END } 2124d382aafbSBarry Smith #else 2125d382aafbSBarry Smith # define EXTERN_C_BEGIN 2126d382aafbSBarry Smith # define EXTERN_C_END 2127d382aafbSBarry Smith #endif 2128d382aafbSBarry Smith 2129d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2130d382aafbSBarry Smith 2131d382aafbSBarry Smith /*MC 2132d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2133d382aafbSBarry Smith communication 2134d382aafbSBarry Smith 2135d382aafbSBarry Smith Level: beginner 2136d382aafbSBarry Smith 2137d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2138d382aafbSBarry Smith 2139d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2140d382aafbSBarry Smith M*/ 2141d382aafbSBarry Smith 2142d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2143014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2144014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2145c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2146c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2147c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2148c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2149d382aafbSBarry Smith #endif 2150d382aafbSBarry Smith 2151d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2152d382aafbSBarry Smith 2153d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2154d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2155d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2156d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2157d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2158d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2159eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2160d382aafbSBarry Smith 216161b0d812SBarry Smith /*@C 2162c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2163c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2164c73702f5SBarry Smith 2165c73702f5SBarry Smith Not Collective 2166c73702f5SBarry Smith 2167c73702f5SBarry Smith Input Parameter: 2168c73702f5SBarry Smith . a - the PetscInt64 value 2169c73702f5SBarry Smith 2170c73702f5SBarry Smith Output Parameter: 2171c73702f5SBarry Smith . b - the resulting PetscInt value 2172c73702f5SBarry Smith 2173c73702f5SBarry Smith Level: advanced 2174c73702f5SBarry Smith 2175c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2176c73702f5SBarry Smith 2177c73702f5SBarry Smith Not available from Fortran 2178c73702f5SBarry Smith 217961778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2180c73702f5SBarry Smith @*/ 2181c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2182c73702f5SBarry Smith { 2183c73702f5SBarry Smith PetscFunctionBegin; 2184c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2185e9e21dffSJose E. Roman if (a > PETSC_MAX_INT) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for PetscInt, you may need to ./configure using --with-64-bit-indices",a); } 2186c73702f5SBarry Smith #endif 2187c73702f5SBarry Smith *b = (PetscInt)(a); 2188c73702f5SBarry Smith PetscFunctionReturn(0); 2189c73702f5SBarry Smith } 2190c73702f5SBarry Smith 2191c73702f5SBarry Smith /*@C 219261b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 219361b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 219461b0d812SBarry Smith 219561b0d812SBarry Smith Not Collective 219661b0d812SBarry Smith 219761b0d812SBarry Smith Input Parameter: 219861b0d812SBarry Smith . a - the PetscInt value 219961b0d812SBarry Smith 220061b0d812SBarry Smith Output Parameter: 220161b0d812SBarry Smith . b - the resulting PetscBLASInt value 220261b0d812SBarry Smith 220361b0d812SBarry Smith Level: advanced 220461b0d812SBarry Smith 22050bc7d38cSBarry Smith Notes: 22061fd49c25SBarry Smith Not available from Fortran 2207f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 22081fd49c25SBarry Smith 2209c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 221061b0d812SBarry Smith @*/ 2211c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2212c5df96a5SBarry Smith { 2213c5df96a5SBarry Smith PetscFunctionBegin; 2214c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 2215e9e21dffSJose E. Roman if (a > PETSC_BLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running",a); } 2216c5df96a5SBarry Smith #endif 2217e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); } 2218c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2219c5df96a5SBarry Smith PetscFunctionReturn(0); 2220c5df96a5SBarry Smith } 2221c5df96a5SBarry Smith 222261b0d812SBarry Smith /*@C 2223eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2224eee0c0a6SToby Isaac 2225eee0c0a6SToby Isaac Not Collective 2226eee0c0a6SToby Isaac 2227eee0c0a6SToby Isaac Input Parameter: 2228eee0c0a6SToby Isaac . a - the PetscInt value 2229eee0c0a6SToby Isaac 2230eee0c0a6SToby Isaac Output Parameter: 2231eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2232eee0c0a6SToby Isaac 2233eee0c0a6SToby Isaac Level: advanced 2234eee0c0a6SToby Isaac 2235eee0c0a6SToby Isaac Notes: 2236eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2237eee0c0a6SToby Isaac 2238eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2239eee0c0a6SToby Isaac @*/ 2240ae77d22fSJunchao Zhang PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscCuBLASInt *b) 2241eee0c0a6SToby Isaac { 2242eee0c0a6SToby Isaac PetscFunctionBegin; 2243eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2244e9e21dffSJose E. Roman if (a > PETSC_CUBLAS_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for cuBLAS, which is restricted to 32 bit integers.",a); } 2245eee0c0a6SToby Isaac #endif 2246e9e21dffSJose E. Roman if (a < 0) { *b = 0; SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); } 2247eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2248eee0c0a6SToby Isaac PetscFunctionReturn(0); 2249eee0c0a6SToby Isaac } 2250eee0c0a6SToby Isaac 2251eee0c0a6SToby Isaac /*@C 225261b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 225361b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 225461b0d812SBarry Smith 225561b0d812SBarry Smith Not Collective 225661b0d812SBarry Smith 225761b0d812SBarry Smith Input Parameter: 225861b0d812SBarry Smith . a - the PetscInt value 225961b0d812SBarry Smith 226061b0d812SBarry Smith Output Parameter: 226161b0d812SBarry Smith . b - the resulting PetscMPIInt value 226261b0d812SBarry Smith 226361b0d812SBarry Smith Level: advanced 226461b0d812SBarry Smith 22651fd49c25SBarry Smith Not available from Fortran 22661fd49c25SBarry Smith 2267c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 226861b0d812SBarry Smith @*/ 22694dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22704dc2109aSBarry Smith { 22714dc2109aSBarry Smith PetscFunctionBegin; 22724dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2273e9e21dffSJose E. Roman if (a > PETSC_MPI_INT_MAX) { *b = 0; SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"%D is too big for MPI buffer length. We currently only support 32 bit integers",a); } 22744dc2109aSBarry Smith #endif 2275c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22764dc2109aSBarry Smith PetscFunctionReturn(0); 22774dc2109aSBarry Smith } 22784dc2109aSBarry Smith 2279bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22802f18eb33SBarry Smith 22812f18eb33SBarry Smith /*@C 22822f18eb33SBarry Smith 22832f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22842f18eb33SBarry Smith 22852f18eb33SBarry Smith Not Collective 22862f18eb33SBarry Smith 2287d8d19677SJose E. Roman Input Parameters: 22882f18eb33SBarry Smith + a - the PetscReal value 22892f18eb33SBarry Smith - b - the second value 22902f18eb33SBarry Smith 2291390e1bf2SBarry Smith Returns: 2292390e1bf2SBarry Smith the result as a PetscInt value 22932f18eb33SBarry Smith 2294bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22952f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22962f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22972f18eb33SBarry Smith 2298e28ce29aSPatrick Sanan Developers Note: 2299e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23002f18eb33SBarry Smith 23012f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23022f18eb33SBarry Smith 23031fd49c25SBarry Smith Not available from Fortran 23041fd49c25SBarry Smith 23052f18eb33SBarry Smith Level: advanced 23062f18eb33SBarry Smith 230761778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23082f18eb33SBarry Smith @*/ 23092f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 23102f18eb33SBarry Smith { 2311bafee8b4SSatish Balay PetscInt64 r; 23122f18eb33SBarry Smith 2313bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 23142f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23152f18eb33SBarry Smith return (PetscInt) r; 23162f18eb33SBarry Smith } 23172f18eb33SBarry Smith 23182f18eb33SBarry Smith /*@C 23192f18eb33SBarry Smith 23202f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 23212f18eb33SBarry Smith 23222f18eb33SBarry Smith Not Collective 23232f18eb33SBarry Smith 2324d8d19677SJose E. Roman Input Parameters: 23252f18eb33SBarry Smith + a - the PetscInt value 23262f18eb33SBarry Smith - b - the second value 23272f18eb33SBarry Smith 2328390e1bf2SBarry Smith Returns: 2329390e1bf2SBarry Smith the result as a PetscInt value 23302f18eb33SBarry Smith 2331bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23322f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23332f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23342f18eb33SBarry Smith 23351fd49c25SBarry Smith Not available from Fortran 23361fd49c25SBarry Smith 23372f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23382f18eb33SBarry Smith 23392f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23402f18eb33SBarry Smith 23412f18eb33SBarry Smith Level: advanced 23422f18eb33SBarry Smith 234361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23442f18eb33SBarry Smith @*/ 23452f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23462f18eb33SBarry Smith { 2347bafee8b4SSatish Balay PetscInt64 r; 23482f18eb33SBarry Smith 2349bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23502f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23512f18eb33SBarry Smith return (PetscInt) r; 23522f18eb33SBarry Smith } 23532f18eb33SBarry Smith 2354f91af8c7SBarry Smith /*@C 2355f91af8c7SBarry Smith 2356f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2357f91af8c7SBarry Smith 2358f91af8c7SBarry Smith Not Collective 2359f91af8c7SBarry Smith 2360d8d19677SJose E. Roman Input Parameters: 2361f91af8c7SBarry Smith + a - the PetscInt value 2362f91af8c7SBarry Smith - b - the second value 2363f91af8c7SBarry Smith 2364390e1bf2SBarry Smith Returns: 2365390e1bf2SBarry Smith the result as a PetscInt value 2366f91af8c7SBarry Smith 2367bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2368f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2369f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2370f91af8c7SBarry Smith 2371f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2372f91af8c7SBarry Smith 2373f5f57ec0SBarry Smith Not available from Fortran 2374f5f57ec0SBarry Smith 2375f91af8c7SBarry Smith Level: advanced 2376f91af8c7SBarry Smith 237761778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2378f91af8c7SBarry Smith @*/ 2379f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2380f91af8c7SBarry Smith { 2381bafee8b4SSatish Balay PetscInt64 r; 2382f91af8c7SBarry Smith 2383bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2384f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2385f91af8c7SBarry Smith return (PetscInt) r; 2386f91af8c7SBarry Smith } 2387f91af8c7SBarry Smith 23882f18eb33SBarry Smith /*@C 23892f18eb33SBarry Smith 23902f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23912f18eb33SBarry Smith 23922f18eb33SBarry Smith Not Collective 23932f18eb33SBarry Smith 2394d8d19677SJose E. Roman Input Parameters: 23952f18eb33SBarry Smith + a - the PetscInt value 23962f18eb33SBarry Smith - b - the second value 23972f18eb33SBarry Smith 2398d8d19677SJose E. Roman Output Parameter: 2399390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 24002f18eb33SBarry Smith 2401bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 24022f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 24032f18eb33SBarry Smith 2404f5f57ec0SBarry Smith Not available from Fortran 2405f5f57ec0SBarry Smith 2406220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 24072f18eb33SBarry Smith 24082f18eb33SBarry Smith Level: advanced 24092f18eb33SBarry Smith 2410220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 24112f18eb33SBarry Smith @*/ 24122f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 24132f18eb33SBarry Smith { 2414bafee8b4SSatish Balay PetscInt64 r; 24152f18eb33SBarry Smith 24162f18eb33SBarry Smith PetscFunctionBegin; 2417bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 24182f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 241961778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 24202f18eb33SBarry Smith #endif 2421f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2422f91af8c7SBarry Smith PetscFunctionReturn(0); 2423f91af8c7SBarry Smith } 2424f91af8c7SBarry Smith 2425f91af8c7SBarry Smith /*@C 2426f91af8c7SBarry Smith 2427fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2428f91af8c7SBarry Smith 2429f91af8c7SBarry Smith Not Collective 2430f91af8c7SBarry Smith 2431d8d19677SJose E. Roman Input Parameters: 2432f91af8c7SBarry Smith + a - the PetscInt value 2433f91af8c7SBarry Smith - b - the second value 2434f91af8c7SBarry Smith 2435d8d19677SJose E. Roman Output Parameter: 2436390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2437f91af8c7SBarry Smith 2438bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2439f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2440f91af8c7SBarry Smith 2441f5f57ec0SBarry Smith Not available from Fortran 2442f5f57ec0SBarry Smith 2443f91af8c7SBarry Smith Level: advanced 2444f91af8c7SBarry Smith 244561778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2446f91af8c7SBarry Smith @*/ 2447f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2448f91af8c7SBarry Smith { 2449bafee8b4SSatish Balay PetscInt64 r; 2450f91af8c7SBarry Smith 2451f91af8c7SBarry Smith PetscFunctionBegin; 2452bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2453f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 245461778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2455f91af8c7SBarry Smith #endif 2456f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24572f18eb33SBarry Smith PetscFunctionReturn(0); 24582f18eb33SBarry Smith } 2459c5df96a5SBarry Smith 2460d382aafbSBarry Smith /* 24612981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2462d382aafbSBarry Smith */ 2463d382aafbSBarry Smith #if defined(hz) 2464d382aafbSBarry Smith # undef hz 2465d382aafbSBarry Smith #endif 2466d382aafbSBarry Smith 246715a5570dSLisandro Dalcin #include <limits.h> 246815a5570dSLisandro Dalcin 246915a5570dSLisandro Dalcin /* The number of bits in a byte */ 247015a5570dSLisandro Dalcin 247115a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 247215a5570dSLisandro Dalcin 2473d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2474d382aafbSBarry Smith # include <sys/types.h> 2475d382aafbSBarry Smith #endif 2476d382aafbSBarry Smith 2477d382aafbSBarry Smith /*MC 2478d382aafbSBarry Smith 247966d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 248066d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 248166d79e26SBarry Smith 248266d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 248366d79e26SBarry Smith 248466d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 248566d79e26SBarry Smith 248666d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 248766d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 248866d79e26SBarry Smith 248966d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 249066d79e26SBarry Smith 249166d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 249266d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 249366d79e26SBarry Smith version number (x.y.z). 249466d79e26SBarry Smith 249566d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 249666d79e26SBarry Smith 249766d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 249866d79e26SBarry Smith 249966d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 250066d79e26SBarry Smith 250166d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 250266d79e26SBarry Smith 250366d79e26SBarry Smith Level: intermediate 250466d79e26SBarry Smith 250566d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 250666d79e26SBarry Smith 250766d79e26SBarry Smith M*/ 250866d79e26SBarry Smith 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 251527710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 25165f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2517d382aafbSBarry Smith 25186a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 25196a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 25206a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2522ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 252322ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2525f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 252660e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2527d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25316c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 253217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 253317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25355569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 253717df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 253939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2540014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2541745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 254239f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2543014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2544014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2545014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25466c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25476c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2548e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2549ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2550ce605777SToby Isaac 25514d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2552676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2553676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2554676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25554d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2556676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2557676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2558676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2559676f2a66SJacob Faibussowitsch 2560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2561014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2562d382aafbSBarry Smith 256376bdecfbSBarry Smith /*J 2564d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2565d382aafbSBarry Smith 2566d382aafbSBarry Smith Level: beginner 2567d382aafbSBarry Smith 2568e28ce29aSPatrick Sanan Notes: 2569e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 257025ccb61fSToby Isaac with the option --download-sprng or --download-random123 2571d382aafbSBarry Smith 25728f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 257376bdecfbSBarry Smith J*/ 257419fd82e9SBarry Smith typedef const char* PetscRandomType; 2575d382aafbSBarry Smith #define PETSCRAND "rand" 2576d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2577d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2578c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 257925ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2580808ba619SStefano Zampini #define PETSCCURAND "curand" 2581d382aafbSBarry Smith 2582d382aafbSBarry Smith /* Logging support */ 2583014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2584d382aafbSBarry Smith 2585607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2586d382aafbSBarry Smith 2587d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2588140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2589d382aafbSBarry Smith 2590bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 259119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 259319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2594fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2596d382aafbSBarry Smith 2597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2599014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2600808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2601808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2602014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2608d382aafbSBarry Smith 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2610014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2611014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2612014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2613014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 261697540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 26178a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 261897540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2619d382aafbSBarry Smith 262030815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 262130815ce0SLisandro Dalcin 26229860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26239860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2624f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2625f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2631014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2633c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2634e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2635c891a504SStefano Zampini #endif 2636d382aafbSBarry Smith 2637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2638014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2639014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2640d382aafbSBarry Smith 2641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2643014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2644014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26472a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2648d382aafbSBarry Smith 2649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2654cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2655cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2656d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2657d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2658d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2659d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26606afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26616afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26626afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26636afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26646afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2665d382aafbSBarry Smith 26666145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26676145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26686145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26696145cd65SJed Brown 2670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2671d382aafbSBarry Smith 2672ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2673ce94432eSBarry Smith 267445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 267545487dadSJed Brown 2676d382aafbSBarry Smith struct _n_PetscSubcomm { 2677d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2678d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2679306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 268045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 268145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2682708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 268345487dadSJed Brown PetscSubcommType type; 2684e5acf8a4SHong Zhang char *subcommprefix; 2685d382aafbSBarry Smith }; 2686d382aafbSBarry Smith 2687c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2688306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 268936be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2690014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2691014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 269465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2695053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2696f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2697e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2698a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2699a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2700a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2701d382aafbSBarry Smith 27029962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 27039962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 27049962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 27059962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 27069962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 27079962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 27089962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 27099962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 27109962606eSBarry Smith 27115e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 27125f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 27135f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27145f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 27155f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 27165e71baefSBarry Smith 2717a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2718a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2719a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2720a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2721a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2722a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2723a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2724a32e93adSJunchao Zhang 272513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27260f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 272713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2728137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2729137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2730137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 273113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 273213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27330f453b92SJed Brown 2734471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2735471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2736471ecdacSJed Brown * possible. */ 27376a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2738d382aafbSBarry Smith 27399de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27409de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27419de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27429de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27439de0f6ecSBarry Smith 2744ace2fbaeSBarry Smith #include <stdarg.h> 2745ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2746ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2747ace2fbaeSBarry Smith 2748268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2749fbfcfee5SBarry Smith 27501f817a21SBarry Smith /*@C 27511f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27521f817a21SBarry Smith 27531f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27541f817a21SBarry Smith 27551f817a21SBarry Smith Input Parameters: 27561f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27571f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27581f817a21SBarry Smith 2759850545d0SSatish Balay Level: intermediate 2760850545d0SSatish Balay 2761f5f57ec0SBarry Smith Not available from Fortran 2762f5f57ec0SBarry Smith 27631f817a21SBarry Smith Options Database: 2764063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27651f817a21SBarry Smith @*/ 2766dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2767dff31646SBarry Smith { 2768dff31646SBarry Smith size_t len; 2769dff31646SBarry Smith char *vstring; 2770dff31646SBarry Smith PetscErrorCode ierr; 2771dff31646SBarry Smith 27721f817a21SBarry Smith PetscFunctionBegin; 27738d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2774dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 277535005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2776580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2777dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27781f817a21SBarry Smith PetscFunctionReturn(0); 2779dff31646SBarry Smith } 2780dff31646SBarry Smith 2781b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2782fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2783fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2784f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2785fe278a28SBarry Smith 2786f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2787f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2788b967cddfSBarry Smith 27899f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27909f4d3c52SBarry Smith 279104102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2792763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2793dff31646SBarry Smith 279468e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27955dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2796d382aafbSBarry Smith 2797b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2798503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2799df05ca09SBarry Smith { 2800df05ca09SBarry Smith unsigned int c,hash = 5381; 2801df05ca09SBarry Smith 2802503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2803df05ca09SBarry Smith return hash; 2804df05ca09SBarry Smith } 280577a5e07dSBarry Smith 280677a5e07dSBarry Smith /*MC 280777a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 280877a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 280977a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 281077a5e07dSBarry Smith 2811d083f849SBarry Smith Collective 281277a5e07dSBarry Smith 281377a5e07dSBarry Smith Synopsis: 281477a5e07dSBarry Smith #include <petscsys.h> 281577a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 281677a5e07dSBarry Smith 281777a5e07dSBarry Smith Input Parameters: 2818df05ca09SBarry Smith + a - pointer to the input data to be reduced 2819df05ca09SBarry Smith . c - the number of MPI data items in a and b 2820df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2821df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2822df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 282377a5e07dSBarry Smith 282477a5e07dSBarry Smith Output Parameter: 2825df05ca09SBarry Smith . b - the reduced values 282677a5e07dSBarry Smith 2827e28ce29aSPatrick Sanan Notes: 2828e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 282977a5e07dSBarry Smith 2830df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2831df05ca09SBarry Smith 2832df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2833df05ca09SBarry Smith 283477a5e07dSBarry Smith Level: developer 283577a5e07dSBarry Smith 283677a5e07dSBarry Smith .seealso: MPI_Allreduce() 283777a5e07dSBarry Smith M*/ 2838df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2839df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2840df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2841df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2842df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2843df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2844df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2845df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2846df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2847df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2848df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2849df05ca09SBarry Smith } while (0) 2850b2566f29SBarry Smith #else 2851df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2852b2566f29SBarry Smith #endif 2853b2566f29SBarry Smith 2854b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28558198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28568198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28572f065d89SBarry Smith #endif 28588198064fSBarry Smith 2859cd88fca5SStefano Zampini /* this is a vile hack */ 2860cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 2861cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL,0); 2862cd88fca5SStefano Zampini #endif 2863cd88fca5SStefano Zampini 286412801b39SBarry Smith /* 286560fbe2beSVaclav Hapla List of external packages and queries on it 286660fbe2beSVaclav Hapla */ 286760fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 286860fbe2beSVaclav Hapla 2869d382aafbSBarry Smith #endif 2870