xref: /petsc/include/petscsys.h (revision ea0fecef664917768e192cccff2e6c6a6a1c35c0)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
14d382aafbSBarry Smith #include "petscconf.h"
15d382aafbSBarry Smith #include "petscfix.h"
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28*ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29*ea0fecefSShri Abhyankar #define _GNU_SOURCE
30*ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352981ebdbSBarry Smith    This facilitates using the C version of PETSc from C++ and the
36e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
37d382aafbSBarry Smith */
38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
40d382aafbSBarry Smith #endif
411ec50b02SJed Brown 
421ec50b02SJed Brown #if defined(__cplusplus)
431ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
441ec50b02SJed Brown #else
451ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
461ec50b02SJed Brown #endif
47d382aafbSBarry Smith 
48d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
49da861ed6SJed Brown #define PETSC_EXTERN extern "C"
50d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
51d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
52d382aafbSBarry Smith #else
53da861ed6SJed Brown #define PETSC_EXTERN extern
54d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
55d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
56d382aafbSBarry Smith #endif
57d382aafbSBarry Smith /* ========================================================================== */
58d382aafbSBarry Smith /*
59d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
60d382aafbSBarry Smith     Web page
61d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
62d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
63d382aafbSBarry Smith     src/docs/website/index.html.
64d382aafbSBarry Smith */
65d382aafbSBarry Smith #include "petscversion.h"
66301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
67d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
68301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
69d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
70301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
71d382aafbSBarry Smith #else
72301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
73301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
74d382aafbSBarry Smith #endif
75d382aafbSBarry Smith 
76d382aafbSBarry Smith /*MC
77d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Input Parameter:
80d382aafbSBarry Smith .   len - length of the string
81d382aafbSBarry Smith 
82d382aafbSBarry Smith     Output Parameter:
83d382aafbSBarry Smith .   version - version string
84d382aafbSBarry Smith 
85d382aafbSBarry Smith     Level: developer
86d382aafbSBarry Smith 
87d382aafbSBarry Smith     Usage:
88d382aafbSBarry Smith     char version[256];
89d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
90d382aafbSBarry Smith 
91d382aafbSBarry Smith     Fortran Note:
92d382aafbSBarry Smith     This routine is not supported in Fortran.
93d382aafbSBarry Smith 
94d382aafbSBarry Smith .seealso: PetscGetProgramName()
95d382aafbSBarry Smith 
96d382aafbSBarry Smith M*/
97d382aafbSBarry Smith 
98d382aafbSBarry Smith /* ========================================================================== */
99d382aafbSBarry Smith 
100d382aafbSBarry Smith /*
101d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
102d382aafbSBarry Smith 
103d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
104d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
105d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
106d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
107d382aafbSBarry Smith     mpicxx.h directly in their code
108d382aafbSBarry Smith */
109d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
110d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
111d382aafbSBarry Smith #include "mpi.h"
11265013866SBarry Smith 
113d382aafbSBarry Smith /*
1142981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
115d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
116d382aafbSBarry Smith */
117d382aafbSBarry Smith #include <stdio.h>
118d382aafbSBarry Smith 
119d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
120d382aafbSBarry Smith #if !defined(MPIAPI)
121d382aafbSBarry Smith #define MPIAPI
122d382aafbSBarry Smith #endif
123d382aafbSBarry Smith 
124b3506946SBarry Smith 
125d382aafbSBarry Smith /*MC
126d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
127d382aafbSBarry Smith 
128d382aafbSBarry Smith     Level: beginner
129d382aafbSBarry Smith 
130d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
131d382aafbSBarry Smith M*/
132d382aafbSBarry Smith typedef int PetscErrorCode;
133d382aafbSBarry Smith 
134d382aafbSBarry Smith /*MC
135d382aafbSBarry Smith 
136503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
137d382aafbSBarry Smith          (internal integer in the data structure used for error
1382981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1390700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
140d382aafbSBarry Smith 
141d382aafbSBarry Smith     Level: advanced
142d382aafbSBarry Smith 
1430700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
144d382aafbSBarry Smith M*/
1450700a824SBarry Smith typedef int PetscClassId;
146d382aafbSBarry Smith 
147d382aafbSBarry Smith 
148d382aafbSBarry Smith /*MC
149d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
150d382aafbSBarry Smith 
151d382aafbSBarry Smith     Level: intermediate
152d382aafbSBarry Smith 
153d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1543b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
155d382aafbSBarry Smith 
1563b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
1572981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
158d382aafbSBarry Smith 
1593b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1602981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
161d382aafbSBarry Smith 
162d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
163d382aafbSBarry Smith 
164d382aafbSBarry Smith M*/
165d382aafbSBarry Smith typedef int PetscMPIInt;
166d382aafbSBarry Smith 
167d382aafbSBarry Smith /*MC
168d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
169d382aafbSBarry Smith 
170d382aafbSBarry Smith     Level: intermediate
171d382aafbSBarry Smith 
172d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
173d382aafbSBarry Smith M*/
174d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
175d382aafbSBarry Smith 
176d382aafbSBarry Smith /*MC
177d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1783b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
179d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
180d382aafbSBarry Smith 
181d382aafbSBarry Smith    Level: intermediate
182d382aafbSBarry Smith 
183d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
184d382aafbSBarry Smith M*/
185f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
186f505b413SSatish Balay typedef long long Petsc64bitInt;
187f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
188236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
189236ed0a3SSatish Balay #else
190f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
191236ed0a3SSatish Balay #endif
192d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
193236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
194d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
195d382aafbSBarry Smith #else
196d382aafbSBarry Smith typedef int PetscInt;
197d382aafbSBarry Smith #define MPIU_INT MPI_INT
198d382aafbSBarry Smith #endif
199236ed0a3SSatish Balay 
200d382aafbSBarry Smith 
201702bc34aSSatish Balay /*MC
202702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
203702bc34aSSatish Balay 
204702bc34aSSatish Balay     Level: intermediate
205702bc34aSSatish Balay 
206702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
207702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
208702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
209702bc34aSSatish Balay 
210702bc34aSSatish Balay     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
2112981ebdbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE error.
212702bc34aSSatish Balay 
213702bc34aSSatish Balay     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
2142981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
215702bc34aSSatish Balay 
2162981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
217702bc34aSSatish Balay      if you run ./configure with the option
218702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
2192981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
2202981ebdbSBarry Smith 
2212981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2222981ebdbSBarry Smith 
2232981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
224702bc34aSSatish Balay 
225702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
226702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
227702bc34aSSatish Balay 
228702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
229702bc34aSSatish Balay 
230702bc34aSSatish Balay M*/
231702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
232702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
233702bc34aSSatish Balay #else
234702bc34aSSatish Balay typedef int PetscBLASInt;
235702bc34aSSatish Balay #endif
236702bc34aSSatish Balay 
23758b60935SBarry Smith /*EC
23858b60935SBarry Smith 
2392981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
24058b60935SBarry Smith 
24158b60935SBarry Smith     Level: advanced
24258b60935SBarry Smith 
24358b60935SBarry Smith .seealso: PetscObjectSetPrecision()
24458b60935SBarry Smith E*/
24558b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
24658b60935SBarry Smith extern const char *PetscPrecisions[];
24758b60935SBarry Smith 
248503cfb0cSBarry Smith /*
249503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
250503cfb0cSBarry Smith */
251d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
252d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
253d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
254d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
255d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
256d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
257d382aafbSBarry Smith #else
258d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
259d382aafbSBarry Smith #endif
260d382aafbSBarry Smith 
261d382aafbSBarry Smith 
262d382aafbSBarry Smith /*
263d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
264d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
265d382aafbSBarry Smith */
266d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
267d382aafbSBarry Smith 
268d382aafbSBarry Smith /*
269d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
270d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
271d382aafbSBarry Smith */
272d382aafbSBarry Smith extern FILE* PETSC_STDERR;
273d382aafbSBarry Smith 
274d382aafbSBarry Smith /*MC
275d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
276d382aafbSBarry Smith 
277d382aafbSBarry Smith     Synopsis:
278ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
279d382aafbSBarry Smith 
280eca87e8dSBarry Smith     Not Collective
281eca87e8dSBarry Smith 
282d382aafbSBarry Smith     Input Parameters:
283d382aafbSBarry Smith .   cond - condition or expression
284d382aafbSBarry Smith 
285d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
286d382aafbSBarry Smith     branch is unlikely.
287d382aafbSBarry Smith 
288d382aafbSBarry Smith     Level: advanced
289d382aafbSBarry Smith 
290d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
291d382aafbSBarry Smith M*/
292d382aafbSBarry Smith 
293d382aafbSBarry Smith /*MC
294d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
295d382aafbSBarry Smith 
296d382aafbSBarry Smith     Synopsis:
297ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
298d382aafbSBarry Smith 
299eca87e8dSBarry Smith     Not Collective
300eca87e8dSBarry Smith 
301d382aafbSBarry Smith     Input Parameters:
302d382aafbSBarry Smith .   cond - condition or expression
303d382aafbSBarry Smith 
304d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
305d382aafbSBarry Smith     branch is likely.
306d382aafbSBarry Smith 
307d382aafbSBarry Smith     Level: advanced
308d382aafbSBarry Smith 
309d382aafbSBarry Smith .seealso: PetscUnlikely()
310d382aafbSBarry Smith M*/
311d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
312d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
313d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
314d382aafbSBarry Smith #else
315cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
316cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
317d382aafbSBarry Smith #endif
318d382aafbSBarry Smith 
319d382aafbSBarry Smith /*
320d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
321d382aafbSBarry Smith */
322d382aafbSBarry Smith #include "petscmath.h"
323d382aafbSBarry Smith 
324d382aafbSBarry Smith /*
325d382aafbSBarry Smith     Declare extern C stuff after including external header files
326d382aafbSBarry Smith */
327d382aafbSBarry Smith 
328d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
329d382aafbSBarry Smith 
330d382aafbSBarry Smith /*
331d382aafbSBarry Smith        Basic PETSc constants
332d382aafbSBarry Smith */
333d382aafbSBarry Smith 
334d382aafbSBarry Smith /*E
335ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
336d382aafbSBarry Smith 
337d382aafbSBarry Smith    Level: beginner
338d382aafbSBarry Smith 
339ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
34034e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
34134e82e7dSBarry Smith 
342d382aafbSBarry Smith E*/
343ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
344ace3abfcSBarry Smith extern const char *PetscBools[];
34570b3c8c7SBarry Smith 
34670b3c8c7SBarry Smith /*E
34770b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
34870b3c8c7SBarry Smith 
34970b3c8c7SBarry Smith    Level: beginner
35070b3c8c7SBarry Smith 
35170b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
35270b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
35370b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
35470b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
35570b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
35670b3c8c7SBarry Smith 
35770b3c8c7SBarry Smith E*/
35870b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
35970b3c8c7SBarry Smith extern const char *PetscCopyModes[];
360d382aafbSBarry Smith 
361d382aafbSBarry Smith /*MC
362ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
363d382aafbSBarry Smith 
364d382aafbSBarry Smith     Level: beginner
365d382aafbSBarry Smith 
366d382aafbSBarry Smith     Note: Zero integer
367d382aafbSBarry Smith 
368ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
369d382aafbSBarry Smith M*/
370d382aafbSBarry Smith 
371d382aafbSBarry Smith /*MC
372ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
373d382aafbSBarry Smith 
374d382aafbSBarry Smith     Level: beginner
375d382aafbSBarry Smith 
376d382aafbSBarry Smith     Note: Nonzero integer
377d382aafbSBarry Smith 
378ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
379d382aafbSBarry Smith M*/
380d382aafbSBarry Smith 
381d382aafbSBarry Smith /*MC
382d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
383d382aafbSBarry Smith 
384d382aafbSBarry Smith    Level: beginner
385d382aafbSBarry Smith 
386d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
387d382aafbSBarry Smith           some default
388d382aafbSBarry Smith 
389d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
390503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
391d382aafbSBarry Smith 
39234e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
39334e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
39434e82e7dSBarry Smith 
395d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
396d382aafbSBarry Smith 
397d382aafbSBarry Smith M*/
398d382aafbSBarry Smith #define PETSC_NULL           0
399d382aafbSBarry Smith 
400d382aafbSBarry Smith /*MC
401d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
402d382aafbSBarry Smith 
403d382aafbSBarry Smith    Level: beginner
404d382aafbSBarry Smith 
405d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
406d382aafbSBarry Smith           some default
407d382aafbSBarry Smith 
408d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
409d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
410d382aafbSBarry Smith 
411d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
412d382aafbSBarry Smith 
413d382aafbSBarry Smith M*/
414d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
415d382aafbSBarry Smith 
416d382aafbSBarry Smith /*MC
417557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
418557d4da8SBarry Smith        where you wish PETSc to use the default.
419557d4da8SBarry Smith 
420557d4da8SBarry Smith    Level: beginner
421557d4da8SBarry Smith 
422557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
423557d4da8SBarry Smith 
424557d4da8SBarry Smith M*/
425557d4da8SBarry Smith #define PETSC_DECIDE  -1
426557d4da8SBarry Smith 
427557d4da8SBarry Smith /*MC
428d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
429d382aafbSBarry Smith        where you wish PETSc to compute the required value.
430d382aafbSBarry Smith 
431d382aafbSBarry Smith    Level: beginner
432d382aafbSBarry Smith 
433557d4da8SBarry Smith 
434557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
435557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
436557d4da8SBarry Smith 
437d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
438d382aafbSBarry Smith 
439d382aafbSBarry Smith M*/
440d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
441d382aafbSBarry Smith 
442d382aafbSBarry Smith /*MC
443557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
444557d4da8SBarry Smith        where you wish PETSc to use the default.
445557d4da8SBarry Smith 
446557d4da8SBarry Smith    Level: beginner
447557d4da8SBarry Smith 
448557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
449557d4da8SBarry Smith 
450557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
451557d4da8SBarry Smith 
452557d4da8SBarry Smith M*/
453557d4da8SBarry Smith #define PETSC_DEFAULT  -2
454557d4da8SBarry Smith 
455557d4da8SBarry Smith /*MC
456d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
457d382aafbSBarry Smith            all the processs that PETSc knows about.
458d382aafbSBarry Smith 
459d382aafbSBarry Smith    Level: beginner
460d382aafbSBarry Smith 
461d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
462d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
463d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
464d382aafbSBarry Smith           PetscInitialize()
465d382aafbSBarry Smith 
466d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
467d382aafbSBarry Smith 
468d382aafbSBarry Smith M*/
469d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
470d382aafbSBarry Smith 
471d382aafbSBarry Smith /*MC
472503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
473d382aafbSBarry Smith 
474d382aafbSBarry Smith    Level: beginner
475d382aafbSBarry Smith 
476d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
477d382aafbSBarry Smith 
478d382aafbSBarry Smith M*/
479d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
480d382aafbSBarry Smith 
4817087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
4827087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
4838b5db460SBarry Smith extern  PetscBool  PetscCUSPSynchronize;
484d382aafbSBarry Smith 
4857087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
4867087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
4877087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
488d382aafbSBarry Smith 
489d382aafbSBarry Smith /*MC
490d382aafbSBarry Smith    PetscMalloc - Allocates memory
491d382aafbSBarry Smith 
492eca87e8dSBarry Smith    Synopsis:
493eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
494eca87e8dSBarry Smith 
495eca87e8dSBarry Smith    Not Collective
496eca87e8dSBarry Smith 
497d382aafbSBarry Smith    Input Parameter:
498d382aafbSBarry Smith .  m - number of bytes to allocate
499d382aafbSBarry Smith 
500d382aafbSBarry Smith    Output Parameter:
501d382aafbSBarry Smith .  result - memory allocated
502d382aafbSBarry Smith 
503d382aafbSBarry Smith    Level: beginner
504d382aafbSBarry Smith 
505d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
506d382aafbSBarry Smith 
507d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
508d382aafbSBarry Smith           properly handle not freeing the null pointer.
509d382aafbSBarry Smith 
510d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
511d382aafbSBarry Smith 
512d382aafbSBarry Smith   Concepts: memory allocation
513d382aafbSBarry Smith 
514d382aafbSBarry Smith M*/
5152714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
516d382aafbSBarry Smith 
517d382aafbSBarry Smith /*MC
518503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
519d382aafbSBarry Smith 
520d382aafbSBarry Smith    Synopsis:
521d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
522d382aafbSBarry Smith 
523eca87e8dSBarry Smith    Not Collective
524eca87e8dSBarry Smith 
525eca87e8dSBarry Smith    Input Parameters:
526eca87e8dSBarry Smith .  addr - address to align (any pointer type)
527eca87e8dSBarry Smith 
528d382aafbSBarry Smith    Level: developer
529d382aafbSBarry Smith 
530d382aafbSBarry Smith .seealso: PetscMallocAlign()
531d382aafbSBarry Smith 
532d382aafbSBarry Smith   Concepts: memory allocation
533d382aafbSBarry Smith M*/
534d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
535d382aafbSBarry Smith 
536d382aafbSBarry Smith /*MC
537503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
538d382aafbSBarry Smith 
539eca87e8dSBarry Smith    Synopsis:
540eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
541eca87e8dSBarry Smith 
542eca87e8dSBarry Smith    Not Collective
543eca87e8dSBarry Smith 
544d382aafbSBarry Smith    Input Parameter:
545d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
546d382aafbSBarry Smith .  t1 - type of first memory elements
547d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
548d382aafbSBarry Smith -  t2 - type of second memory elements
549d382aafbSBarry Smith 
550d382aafbSBarry Smith    Output Parameter:
551d382aafbSBarry Smith +  r1 - memory allocated in first chunk
552d382aafbSBarry Smith -  r2 - memory allocated in second chunk
553d382aafbSBarry Smith 
554d382aafbSBarry Smith    Level: developer
555d382aafbSBarry Smith 
556d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
557d382aafbSBarry Smith 
558d382aafbSBarry Smith   Concepts: memory allocation
559d382aafbSBarry Smith 
560d382aafbSBarry Smith M*/
561d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
562d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
563d382aafbSBarry Smith #else
5642981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
565d382aafbSBarry Smith #endif
566d382aafbSBarry Smith 
567d382aafbSBarry Smith /*MC
568503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
569d382aafbSBarry Smith 
570eca87e8dSBarry Smith    Synopsis:
571eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
572eca87e8dSBarry Smith 
573eca87e8dSBarry Smith    Not Collective
574eca87e8dSBarry Smith 
575d382aafbSBarry Smith    Input Parameter:
576d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
577d382aafbSBarry Smith .  t1 - type of first memory elements
578d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
579d382aafbSBarry Smith .  t2 - type of second memory elements
580d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
581d382aafbSBarry Smith -  t3 - type of third memory elements
582d382aafbSBarry Smith 
583d382aafbSBarry Smith    Output Parameter:
584d382aafbSBarry Smith +  r1 - memory allocated in first chunk
585d382aafbSBarry Smith .  r2 - memory allocated in second chunk
586d382aafbSBarry Smith -  r3 - memory allocated in third chunk
587d382aafbSBarry Smith 
588d382aafbSBarry Smith    Level: developer
589d382aafbSBarry Smith 
590d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
591d382aafbSBarry Smith 
592d382aafbSBarry Smith   Concepts: memory allocation
593d382aafbSBarry Smith 
594d382aafbSBarry Smith M*/
595d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
596d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
597d382aafbSBarry Smith #else
5983b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
599d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
600d382aafbSBarry Smith #endif
601d382aafbSBarry Smith 
602d382aafbSBarry Smith /*MC
603503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
604d382aafbSBarry Smith 
605eca87e8dSBarry Smith    Synopsis:
606eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
607eca87e8dSBarry Smith 
608eca87e8dSBarry Smith    Not Collective
609eca87e8dSBarry Smith 
610d382aafbSBarry Smith    Input Parameter:
611d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
612d382aafbSBarry Smith .  t1 - type of first memory elements
613d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
614d382aafbSBarry Smith .  t2 - type of second memory elements
615d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
616d382aafbSBarry Smith .  t3 - type of third memory elements
617d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
618d382aafbSBarry Smith -  t4 - type of fourth memory elements
619d382aafbSBarry Smith 
620d382aafbSBarry Smith    Output Parameter:
621d382aafbSBarry Smith +  r1 - memory allocated in first chunk
622d382aafbSBarry Smith .  r2 - memory allocated in second chunk
623d382aafbSBarry Smith .  r3 - memory allocated in third chunk
624d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
625d382aafbSBarry Smith 
626d382aafbSBarry Smith    Level: developer
627d382aafbSBarry Smith 
628d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
629d382aafbSBarry Smith 
630d382aafbSBarry Smith   Concepts: memory allocation
631d382aafbSBarry Smith 
632d382aafbSBarry Smith M*/
633d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
634d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
635d382aafbSBarry Smith #else
636d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6373b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
638d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
639d382aafbSBarry Smith #endif
640d382aafbSBarry Smith 
641d382aafbSBarry Smith /*MC
642503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
643d382aafbSBarry Smith 
644eca87e8dSBarry Smith    Synopsis:
645eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
646eca87e8dSBarry Smith 
647eca87e8dSBarry Smith    Not Collective
648eca87e8dSBarry Smith 
649d382aafbSBarry Smith    Input Parameter:
650d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
651d382aafbSBarry Smith .  t1 - type of first memory elements
652d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
653d382aafbSBarry Smith .  t2 - type of second memory elements
654d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
655d382aafbSBarry Smith .  t3 - type of third memory elements
656d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
657d382aafbSBarry Smith .  t4 - type of fourth memory elements
658d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
659d382aafbSBarry Smith -  t5 - type of fifth memory elements
660d382aafbSBarry Smith 
661d382aafbSBarry Smith    Output Parameter:
662d382aafbSBarry Smith +  r1 - memory allocated in first chunk
663d382aafbSBarry Smith .  r2 - memory allocated in second chunk
664d382aafbSBarry Smith .  r3 - memory allocated in third chunk
665d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
666d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
667d382aafbSBarry Smith 
668d382aafbSBarry Smith    Level: developer
669d382aafbSBarry Smith 
670d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
671d382aafbSBarry Smith 
672d382aafbSBarry Smith   Concepts: memory allocation
673d382aafbSBarry Smith 
674d382aafbSBarry Smith M*/
675d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
676d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
677d382aafbSBarry Smith #else
678d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6793b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
680d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
681d382aafbSBarry Smith #endif
682d382aafbSBarry Smith 
683d382aafbSBarry Smith 
684d382aafbSBarry Smith /*MC
685503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
686d382aafbSBarry Smith 
687eca87e8dSBarry Smith    Synopsis:
688eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
689eca87e8dSBarry Smith 
690eca87e8dSBarry Smith    Not Collective
691eca87e8dSBarry Smith 
692d382aafbSBarry Smith    Input Parameter:
693d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
694d382aafbSBarry Smith .  t1 - type of first memory elements
695d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
696d382aafbSBarry Smith .  t2 - type of second memory elements
697d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
698d382aafbSBarry Smith .  t3 - type of third memory elements
699d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
700d382aafbSBarry Smith .  t4 - type of fourth memory elements
701d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
702d382aafbSBarry Smith .  t5 - type of fifth memory elements
703d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
704d382aafbSBarry Smith -  t6 - type of sixth memory elements
705d382aafbSBarry Smith 
706d382aafbSBarry Smith    Output Parameter:
707d382aafbSBarry Smith +  r1 - memory allocated in first chunk
708d382aafbSBarry Smith .  r2 - memory allocated in second chunk
709d382aafbSBarry Smith .  r3 - memory allocated in third chunk
710d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
711d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
712d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
713d382aafbSBarry Smith 
714d382aafbSBarry Smith    Level: developer
715d382aafbSBarry Smith 
716d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
717d382aafbSBarry Smith 
718d382aafbSBarry Smith   Concepts: memory allocation
719d382aafbSBarry Smith 
720d382aafbSBarry Smith M*/
721d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
722d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
723d382aafbSBarry Smith #else
724d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7253b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
726d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
727d382aafbSBarry Smith #endif
728d382aafbSBarry Smith 
729d382aafbSBarry Smith /*MC
730503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
731d382aafbSBarry Smith 
732eca87e8dSBarry Smith    Synopsis:
733eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
734eca87e8dSBarry Smith 
735eca87e8dSBarry Smith    Not Collective
736eca87e8dSBarry Smith 
737d382aafbSBarry Smith    Input Parameter:
738d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
739d382aafbSBarry Smith .  t1 - type of first memory elements
740d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
741d382aafbSBarry Smith .  t2 - type of second memory elements
742d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
743d382aafbSBarry Smith .  t3 - type of third memory elements
744d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
745d382aafbSBarry Smith .  t4 - type of fourth memory elements
746d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
747d382aafbSBarry Smith .  t5 - type of fifth memory elements
748d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
749d382aafbSBarry Smith .  t6 - type of sixth memory elements
750d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
751d382aafbSBarry Smith -  t7 - type of sixth memory elements
752d382aafbSBarry Smith 
753d382aafbSBarry Smith    Output Parameter:
754d382aafbSBarry Smith +  r1 - memory allocated in first chunk
755d382aafbSBarry Smith .  r2 - memory allocated in second chunk
756d382aafbSBarry Smith .  r3 - memory allocated in third chunk
757d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
758d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
759d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
760eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
761d382aafbSBarry Smith 
762d382aafbSBarry Smith    Level: developer
763d382aafbSBarry Smith 
764d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
765d382aafbSBarry Smith 
766d382aafbSBarry Smith   Concepts: memory allocation
767d382aafbSBarry Smith 
768d382aafbSBarry Smith M*/
769d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
770d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
771d382aafbSBarry Smith #else
772d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7733b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
774d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
775d382aafbSBarry Smith #endif
776d382aafbSBarry Smith 
777d382aafbSBarry Smith /*MC
778503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
779d382aafbSBarry Smith 
780eca87e8dSBarry Smith    Synopsis:
781eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
782eca87e8dSBarry Smith 
783eca87e8dSBarry Smith    Not Collective
784eca87e8dSBarry Smith 
785d382aafbSBarry Smith    Input Parameter:
786d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
787d382aafbSBarry Smith 
788d382aafbSBarry Smith    Output Parameter:
789d382aafbSBarry Smith .  result - memory allocated
790d382aafbSBarry Smith 
791d382aafbSBarry Smith    Level: beginner
792d382aafbSBarry Smith 
793ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
794d382aafbSBarry Smith 
795d382aafbSBarry Smith   Concepts: memory allocation
796d382aafbSBarry Smith 
797d382aafbSBarry Smith M*/
798d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
799ad0619ddSBarry Smith 
800ad0619ddSBarry Smith /*MC
801ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
802ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
803ad0619ddSBarry Smith 
804ad0619ddSBarry Smith    Synopsis:
805ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
806ad0619ddSBarry Smith 
807ad0619ddSBarry Smith    Not Collective
808ad0619ddSBarry Smith 
809ad0619ddSBarry Smith    Input Parameter:
810ad0619ddSBarry Smith +  obj - object memory is logged to
811ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
812ad0619ddSBarry Smith 
813ad0619ddSBarry Smith    Output Parameter:
814ad0619ddSBarry Smith .  result - memory allocated
815ad0619ddSBarry Smith 
816ad0619ddSBarry Smith    Level: developer
817ad0619ddSBarry Smith 
818ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
819ad0619ddSBarry Smith 
820ad0619ddSBarry Smith   Concepts: memory allocation
821ad0619ddSBarry Smith 
822ad0619ddSBarry Smith M*/
823d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
824d382aafbSBarry Smith 
825d382aafbSBarry Smith /*MC
826d382aafbSBarry Smith    PetscFree - Frees memory
827d382aafbSBarry Smith 
828eca87e8dSBarry Smith    Synopsis:
829eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
830eca87e8dSBarry Smith 
831eca87e8dSBarry Smith    Not Collective
832eca87e8dSBarry Smith 
833d382aafbSBarry Smith    Input Parameter:
834d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
835d382aafbSBarry Smith 
836d382aafbSBarry Smith    Level: beginner
837d382aafbSBarry Smith 
838d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
839d382aafbSBarry Smith 
840d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
841d382aafbSBarry Smith 
842d382aafbSBarry Smith   Concepts: memory allocation
843d382aafbSBarry Smith 
844d382aafbSBarry Smith M*/
84512537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
846d382aafbSBarry Smith 
847d382aafbSBarry Smith /*MC
848d382aafbSBarry Smith    PetscFreeVoid - Frees memory
849d382aafbSBarry Smith 
850d382aafbSBarry Smith    Synopsis:
851d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
852d382aafbSBarry Smith 
853eca87e8dSBarry Smith    Not Collective
854eca87e8dSBarry Smith 
855eca87e8dSBarry Smith    Input Parameter:
856eca87e8dSBarry Smith .   memory - memory to free
857eca87e8dSBarry Smith 
858d382aafbSBarry Smith    Level: beginner
859d382aafbSBarry Smith 
860d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
861d382aafbSBarry Smith 
862d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
863d382aafbSBarry Smith 
864d382aafbSBarry Smith   Concepts: memory allocation
865d382aafbSBarry Smith 
866d382aafbSBarry Smith M*/
8672714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
868d382aafbSBarry Smith 
869d382aafbSBarry Smith 
870d382aafbSBarry Smith /*MC
871d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
872d382aafbSBarry Smith 
873eca87e8dSBarry Smith    Synopsis:
874eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
875eca87e8dSBarry Smith 
876eca87e8dSBarry Smith    Not Collective
877eca87e8dSBarry Smith 
878d382aafbSBarry Smith    Input Parameter:
879d382aafbSBarry Smith +   memory1 - memory to free
880d382aafbSBarry Smith -   memory2 - 2nd memory to free
881d382aafbSBarry Smith 
882d382aafbSBarry Smith    Level: developer
883d382aafbSBarry Smith 
884d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
885d382aafbSBarry Smith 
886d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
887d382aafbSBarry Smith 
888d382aafbSBarry Smith   Concepts: memory allocation
889d382aafbSBarry Smith 
890d382aafbSBarry Smith M*/
891d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
892d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
893d382aafbSBarry Smith #else
89481dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
895d382aafbSBarry Smith #endif
896d382aafbSBarry Smith 
897d382aafbSBarry Smith /*MC
898d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
899d382aafbSBarry Smith 
900eca87e8dSBarry Smith    Synopsis:
901eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
902eca87e8dSBarry Smith 
903eca87e8dSBarry Smith    Not Collective
904eca87e8dSBarry Smith 
905d382aafbSBarry Smith    Input Parameter:
906d382aafbSBarry Smith +   memory1 - memory to free
907d382aafbSBarry Smith .   memory2 - 2nd memory to free
908d382aafbSBarry Smith -   memory3 - 3rd memory to free
909d382aafbSBarry Smith 
910d382aafbSBarry Smith    Level: developer
911d382aafbSBarry Smith 
912d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
913d382aafbSBarry Smith 
914d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
915d382aafbSBarry Smith 
916d382aafbSBarry Smith   Concepts: memory allocation
917d382aafbSBarry Smith 
918d382aafbSBarry Smith M*/
919d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
920d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
921d382aafbSBarry Smith #else
92281dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
923d382aafbSBarry Smith #endif
924d382aafbSBarry Smith 
925d382aafbSBarry Smith /*MC
926d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
927d382aafbSBarry Smith 
928eca87e8dSBarry Smith    Synopsis:
929eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
930eca87e8dSBarry Smith 
931eca87e8dSBarry Smith    Not Collective
932eca87e8dSBarry Smith 
933d382aafbSBarry Smith    Input Parameter:
934d382aafbSBarry Smith +   m1 - memory to free
935d382aafbSBarry Smith .   m2 - 2nd memory to free
936d382aafbSBarry Smith .   m3 - 3rd memory to free
937d382aafbSBarry Smith -   m4 - 4th memory to free
938d382aafbSBarry Smith 
939d382aafbSBarry Smith    Level: developer
940d382aafbSBarry Smith 
941d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
942d382aafbSBarry Smith 
943d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
944d382aafbSBarry Smith 
945d382aafbSBarry Smith   Concepts: memory allocation
946d382aafbSBarry Smith 
947d382aafbSBarry Smith M*/
948d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
949d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
950d382aafbSBarry Smith #else
95181dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
952d382aafbSBarry Smith #endif
953d382aafbSBarry Smith 
954d382aafbSBarry Smith /*MC
955d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
956d382aafbSBarry Smith 
957eca87e8dSBarry Smith    Synopsis:
958eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
959eca87e8dSBarry Smith 
960eca87e8dSBarry Smith    Not Collective
961eca87e8dSBarry Smith 
962d382aafbSBarry Smith    Input Parameter:
963d382aafbSBarry Smith +   m1 - memory to free
964d382aafbSBarry Smith .   m2 - 2nd memory to free
965d382aafbSBarry Smith .   m3 - 3rd memory to free
966d382aafbSBarry Smith .   m4 - 4th memory to free
967d382aafbSBarry Smith -   m5 - 5th memory to free
968d382aafbSBarry Smith 
969d382aafbSBarry Smith    Level: developer
970d382aafbSBarry Smith 
971d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
972d382aafbSBarry Smith 
973d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
974d382aafbSBarry Smith 
975d382aafbSBarry Smith   Concepts: memory allocation
976d382aafbSBarry Smith 
977d382aafbSBarry Smith M*/
978d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
979d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
980d382aafbSBarry Smith #else
98181dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
982d382aafbSBarry Smith #endif
983d382aafbSBarry Smith 
984d382aafbSBarry Smith 
985d382aafbSBarry Smith /*MC
986d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
987d382aafbSBarry Smith 
988eca87e8dSBarry Smith    Synopsis:
989eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
990eca87e8dSBarry Smith 
991eca87e8dSBarry Smith    Not Collective
992eca87e8dSBarry Smith 
993d382aafbSBarry Smith    Input Parameter:
994d382aafbSBarry Smith +   m1 - memory to free
995d382aafbSBarry Smith .   m2 - 2nd memory to free
996d382aafbSBarry Smith .   m3 - 3rd memory to free
997d382aafbSBarry Smith .   m4 - 4th memory to free
998d382aafbSBarry Smith .   m5 - 5th memory to free
999d382aafbSBarry Smith -   m6 - 6th memory to free
1000d382aafbSBarry Smith 
1001d382aafbSBarry Smith 
1002d382aafbSBarry Smith    Level: developer
1003d382aafbSBarry Smith 
1004d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1005d382aafbSBarry Smith 
1006d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1007d382aafbSBarry Smith 
1008d382aafbSBarry Smith   Concepts: memory allocation
1009d382aafbSBarry Smith 
1010d382aafbSBarry Smith M*/
1011d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1012d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1013d382aafbSBarry Smith #else
101481dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1015d382aafbSBarry Smith #endif
1016d382aafbSBarry Smith 
1017d382aafbSBarry Smith /*MC
1018d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1019d382aafbSBarry Smith 
1020eca87e8dSBarry Smith    Synopsis:
1021eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1022eca87e8dSBarry Smith 
1023eca87e8dSBarry Smith    Not Collective
1024eca87e8dSBarry Smith 
1025d382aafbSBarry Smith    Input Parameter:
1026d382aafbSBarry Smith +   m1 - memory to free
1027d382aafbSBarry Smith .   m2 - 2nd memory to free
1028d382aafbSBarry Smith .   m3 - 3rd memory to free
1029d382aafbSBarry Smith .   m4 - 4th memory to free
1030d382aafbSBarry Smith .   m5 - 5th memory to free
1031d382aafbSBarry Smith .   m6 - 6th memory to free
1032d382aafbSBarry Smith -   m7 - 7th memory to free
1033d382aafbSBarry Smith 
1034d382aafbSBarry Smith 
1035d382aafbSBarry Smith    Level: developer
1036d382aafbSBarry Smith 
1037d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1038d382aafbSBarry Smith 
1039d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1040d382aafbSBarry Smith           PetscMalloc7()
1041d382aafbSBarry Smith 
1042d382aafbSBarry Smith   Concepts: memory allocation
1043d382aafbSBarry Smith 
1044d382aafbSBarry Smith M*/
1045d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1046d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1047d382aafbSBarry Smith #else
104881dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1049d382aafbSBarry Smith #endif
1050d382aafbSBarry Smith 
10517087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
10527087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
10537087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
10547087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith /*
1057a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1058a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1059a5057860SBarry Smith   timing etc.
1060a5057860SBarry Smith */
1061a5057860SBarry Smith typedef double PetscLogDouble;
1062a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1063a5057860SBarry Smith 
1064a5057860SBarry Smith /*
106566d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1066d382aafbSBarry Smith */
10677087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
10687087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
10697087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
10707087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
10717087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
10727087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
10737087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
107418a2528dSJed Brown extern PetscErrorCode    PetscMallocGetDumpLog(PetscBool*);
1075d382aafbSBarry Smith 
1076d382aafbSBarry Smith /*E
1077d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1078d382aafbSBarry Smith 
1079d382aafbSBarry Smith    Level: beginner
1080d382aafbSBarry Smith 
1081d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1082d382aafbSBarry Smith 
1083d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1084d382aafbSBarry Smith           PetscDataTypeGetSize()
1085d382aafbSBarry Smith 
1086d382aafbSBarry Smith E*/
1087d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
108859a34000SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType;
1089d382aafbSBarry Smith extern const char *PetscDataTypes[];
1090d382aafbSBarry Smith 
1091d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1092d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1093d382aafbSBarry Smith #else
1094ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1095d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
109659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
109759a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1098d382aafbSBarry Smith #else
1099d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1100d382aafbSBarry Smith #endif
1101d382aafbSBarry Smith #endif
1102ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1103d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
110459a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
110559a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1106d382aafbSBarry Smith #else
1107d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1108d382aafbSBarry Smith #endif
1109d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1110d382aafbSBarry Smith 
11117087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11127087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11137087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1114d382aafbSBarry Smith 
1115d382aafbSBarry Smith /*
1116d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1117d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1118d382aafbSBarry Smith    functionality and/or error checking.
1119d382aafbSBarry Smith */
11207087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11217087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11227087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11237087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11247087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11257087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11267087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11277087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11287087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11297087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11307087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11317087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11327087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11337087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11347087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11357087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11367087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11377087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11387087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
113974722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
11407ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
11417087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11427087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1143d382aafbSBarry Smith 
1144d382aafbSBarry Smith /*S
1145d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1146d382aafbSBarry Smith 
1147d382aafbSBarry Smith   Level: intermediate
1148d382aafbSBarry Smith 
1149d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1150d382aafbSBarry Smith S*/
1151d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1152d382aafbSBarry Smith 
11537087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
11547087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
11558c74ee41SBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken*);
1156d382aafbSBarry Smith 
1157d382aafbSBarry Smith /*
1158d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1159d382aafbSBarry Smith */
11607087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
11612414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1162b0c94c62SJed Brown extern  MPI_Op MPIU_SUM;
11632414b3c7SJed Brown #else
11642414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11652414b3c7SJed Brown #endif
11662414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1167d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1168d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1169d9822059SBarry Smith #else
1170d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1171d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1172d9822059SBarry Smith #endif
11737087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1174d382aafbSBarry Smith 
1175a25532f0SBarry Smith extern PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1176a25532f0SBarry Smith extern PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1177eb3f98d2SBarry Smith 
1178d382aafbSBarry Smith /*S
1179d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1180d382aafbSBarry Smith 
1181d382aafbSBarry Smith    Level: beginner
1182d382aafbSBarry Smith 
11832981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1184d382aafbSBarry Smith 
11851890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1186d382aafbSBarry Smith S*/
1187d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1188d382aafbSBarry Smith 
1189d382aafbSBarry Smith /*S
1190d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1191d382aafbSBarry Smith       by string name
1192d382aafbSBarry Smith 
1193d382aafbSBarry Smith    Level: advanced
1194d382aafbSBarry Smith 
11952981ebdbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy(), PetscOpFlist
1196d382aafbSBarry Smith S*/
1197d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1198d382aafbSBarry Smith 
1199e4d1774bSDmitry Karpeev /*S
1200e4d1774bSDmitry Karpeev      PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries,
1201e4d1774bSDmitry Karpeev                     accessed by string op name together with string argument types.
1202e4d1774bSDmitry Karpeev 
1203e4d1774bSDmitry Karpeev    Level: advanced
1204e4d1774bSDmitry Karpeev 
12052981ebdbSBarry Smith .seealso:  PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy()
1206e4d1774bSDmitry Karpeev S*/
1207e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList;
1208e4d1774bSDmitry Karpeev 
1209d382aafbSBarry Smith /*E
1210d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1211d382aafbSBarry Smith 
1212d382aafbSBarry Smith   Level: beginner
1213d382aafbSBarry Smith 
1214d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1215d382aafbSBarry Smith 
1216d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1217d382aafbSBarry Smith 
1218d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1219d382aafbSBarry Smith 
1220d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1221d382aafbSBarry Smith 
1222d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1225d382aafbSBarry Smith E*/
1226d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1227d382aafbSBarry Smith 
1228d382aafbSBarry Smith #include "petscviewer.h"
1229d382aafbSBarry Smith #include "petscoptions.h"
1230d382aafbSBarry Smith 
12310700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12327087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12337087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12347087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1235d382aafbSBarry Smith 
1236d382aafbSBarry Smith /*
1237d382aafbSBarry Smith    Routines that get memory usage information from the OS
1238d382aafbSBarry Smith */
12397087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12407087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12417087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12427087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1243d382aafbSBarry Smith 
12447087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12457087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12467087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12477087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1248d382aafbSBarry Smith 
1249d382aafbSBarry Smith /*
1250d382aafbSBarry Smith    Initialization of PETSc
1251d382aafbSBarry Smith */
12527087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
12532981ebdbSBarry Smith extern PetscErrorCode  PetscInitializeNoPointers(int,char**,const char[],const char[]);
12547087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
12557087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool *);
12567087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool *);
12577087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
125809573ac7SBarry Smith extern PetscErrorCode  PetscInitializeFortran(void);
12597087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
12607087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
12617087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1262d382aafbSBarry Smith 
12637087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
12647087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1265d382aafbSBarry Smith 
1266d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
126785afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
126885afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
126985afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
127085afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
127185afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
127285afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
127385afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1274d382aafbSBarry Smith 
12757087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
12767087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
12777087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
12785180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1279d382aafbSBarry Smith 
1280d382aafbSBarry Smith /*
1281d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12822981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1283d382aafbSBarry Smith */
1284d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1285d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1286d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1287d382aafbSBarry Smith 
1288d382aafbSBarry Smith /*
1289d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1290d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1291503cfb0cSBarry Smith 
1292503cfb0cSBarry Smith    Level: developer
1293503cfb0cSBarry Smith 
1294503cfb0cSBarry Smith .seealso: PetscUseMethod()
1295d382aafbSBarry Smith */
1296d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1297d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1298d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1299d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1300d382aafbSBarry Smith   }
1301503cfb0cSBarry Smith 
1302503cfb0cSBarry Smith /*
1303503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1304503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1305503cfb0cSBarry Smith 
1306503cfb0cSBarry Smith    Level: developer
1307503cfb0cSBarry Smith 
1308503cfb0cSBarry Smith .seealso: PetscTryMethod()
1309503cfb0cSBarry Smith */
1310d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1311d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1312d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1313d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1314703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1315d382aafbSBarry Smith   }
1316503cfb0cSBarry Smith 
1317d382aafbSBarry Smith /*
1318d382aafbSBarry Smith     Functions that can act on any PETSc object.
1319d382aafbSBarry Smith */
1320fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13217087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13227087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1323609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13247087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13257087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13267087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13277087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13287087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13297087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13307087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13317087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13327087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13337087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13347087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13357087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13367087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13377087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13387087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13396ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13407087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13417087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13427087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13437087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13447087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13457087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13467087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13477087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
134876270f95SDmitry Karpeev extern PetscErrorCode  PetscObjectListGetGlobalNumbering(MPI_Comm, PetscInt,PetscObject*, PetscInt*,PetscInt*);
1349d382aafbSBarry Smith 
1350d382aafbSBarry Smith /*MC
1351d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1352d382aafbSBarry Smith 
1353eca87e8dSBarry Smith     Synopsis:
1354eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1355eca87e8dSBarry Smith 
1356ad4df100SBarry Smith    Logically Collective on PetscObject
1357d382aafbSBarry Smith 
1358d382aafbSBarry Smith    Input Parameters:
1359d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1360d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1361d382aafbSBarry Smith .  name - name associated with the child function
1362d382aafbSBarry Smith .  fname - name of the function
1363d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1364d382aafbSBarry Smith 
1365d382aafbSBarry Smith    Level: advanced
1366d382aafbSBarry Smith 
1367d382aafbSBarry Smith 
1368d382aafbSBarry Smith    Notes:
1369d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1370d382aafbSBarry Smith 
1371d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1372d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1373d382aafbSBarry Smith 
1374d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
137520de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1376d382aafbSBarry Smith    enabled.
1377d382aafbSBarry Smith 
1378d382aafbSBarry Smith    Concepts: objects^composing functions
1379d382aafbSBarry Smith    Concepts: composing functions
1380d382aafbSBarry Smith    Concepts: functions^querying
1381d382aafbSBarry Smith    Concepts: objects^querying
1382d382aafbSBarry Smith    Concepts: querying objects
1383d382aafbSBarry Smith 
1384d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1385d382aafbSBarry Smith M*/
1386d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1387d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1388d382aafbSBarry Smith #else
1389d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1390d382aafbSBarry Smith #endif
1391d382aafbSBarry Smith 
13927087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
13937087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
13947087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
13957087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
13967087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
13977087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
13987087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
13997087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14007087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14017087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14027087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
1403251f4c67SDmitry Karpeev extern PetscErrorCode  PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1404251f4c67SDmitry Karpeev extern PetscErrorCode  PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14057087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14067087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1407d382aafbSBarry Smith 
1408d382aafbSBarry Smith /*
1409d382aafbSBarry Smith     Defines PETSc error handling.
1410d382aafbSBarry Smith */
1411d382aafbSBarry Smith #include "petscerror.h"
1412d382aafbSBarry Smith 
1413d382aafbSBarry Smith /*S
1414503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1415d382aafbSBarry Smith 
14161d0fab5eSBarry Smith    Level: developer
1417d382aafbSBarry Smith 
14181d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14191d0fab5eSBarry Smith 
14202981ebdbSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList
1421d382aafbSBarry Smith S*/
1422d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1423d382aafbSBarry Smith 
1424fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14257087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1426bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14277087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14286ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14297087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1430d382aafbSBarry Smith 
1431d382aafbSBarry Smith /*
1432503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1433d382aafbSBarry Smith   link libraries that will be loaded as needed.
1434d382aafbSBarry Smith */
14357087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14367087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14374b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14387087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1439d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1440d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1441d382aafbSBarry Smith #else
1442d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1443d382aafbSBarry Smith #endif
14447087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14457087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14467087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14477087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1448d382aafbSBarry Smith 
144948703020SDmitry Karpeev /*
145048703020SDmitry Karpeev     Multiple dispatch operation function lists. Lists of names of routines with corresponding
145148703020SDmitry Karpeev     argument type names with function pointers or in dynamic link libraries that will be loaded
145248703020SDmitry Karpeev     as needed.  Search on the op name and argument type names.
145348703020SDmitry Karpeev */
14542356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]);
145548703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListDestroy(PetscOpFList*);
14562356f84bSDmitry Karpeev extern PetscErrorCode  PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]);
145748703020SDmitry Karpeev extern PetscErrorCode  PetscOpFListView(PetscOpFList,PetscViewer);
14582981ebdbSBarry Smith 
1459d382aafbSBarry Smith /*S
1460d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1461d382aafbSBarry Smith 
1462d382aafbSBarry Smith    Level: advanced
1463d382aafbSBarry Smith 
146420de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1465d382aafbSBarry Smith 
1466d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1467d382aafbSBarry Smith S*/
1468d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1469d44a1e48SBarry Smith extern PetscDLLibrary  PetscDLLibrariesLoaded;
14707087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
14717087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
14727087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
14737087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
14747087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
14757087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
14767087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
1477d382aafbSBarry Smith 
1478d382aafbSBarry Smith /*
1479a5a3d712SDmitry Karpeev   PetscShell support.  Needs to be better documented.
148005846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
148105846914SDmitry Karpeev */
1482a5a3d712SDmitry Karpeev #include "petscshell.h"
148305846914SDmitry Karpeev 
148405846914SDmitry Karpeev /*
1485d382aafbSBarry Smith      Useful utility routines
1486d382aafbSBarry Smith */
14877087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
14887087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
14897087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
14907087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
14917087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
14927087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1493d382aafbSBarry Smith 
1494503cfb0cSBarry Smith /*
1495ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1496503cfb0cSBarry Smith 
1497503cfb0cSBarry Smith     Notes: This is useful in cases like
1498503cfb0cSBarry Smith $     int        *a;
1499ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1500ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1501503cfb0cSBarry Smith */
1502d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1503503cfb0cSBarry Smith 
1504d382aafbSBarry Smith /*
1505d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1506d382aafbSBarry Smith */
1507d382aafbSBarry Smith #include "petscdraw.h"
1508d382aafbSBarry Smith 
1509d382aafbSBarry Smith /*
1510d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1511d382aafbSBarry Smith */
1512b45d2f2cSJed Brown #include "petsc-private/petscimpl.h"
1513503cfb0cSBarry Smith 
1514238ccf28SShri Abhyankar 
1515d382aafbSBarry Smith /*MC
1516d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1517d382aafbSBarry Smith 
1518d382aafbSBarry Smith    Synopsis:
1519d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1520d382aafbSBarry Smith 
1521eca87e8dSBarry Smith     Not Collective
1522eca87e8dSBarry Smith 
1523d382aafbSBarry Smith     Input Parameters:
1524d382aafbSBarry Smith .   format - the usual printf() format string
1525d382aafbSBarry Smith 
1526d382aafbSBarry Smith    Options Database Keys:
1527d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1528d382aafbSBarry Smith          (default) stderr
1529d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1530d382aafbSBarry Smith           error is handled.)
1531d382aafbSBarry Smith 
1532d382aafbSBarry Smith    Notes: Use
1533d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1534d382aafbSBarry Smith $                        error is handled.) and
1535d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1536c9a19010SBarry Smith $        of you can use your own function
1537d382aafbSBarry Smith 
1538d382aafbSBarry Smith           Use
1539d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1540d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1541d382aafbSBarry Smith 
1542d382aafbSBarry Smith           Use
1543d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1544d382aafbSBarry Smith 
1545d382aafbSBarry Smith    Level: developer
1546d382aafbSBarry Smith 
1547d382aafbSBarry Smith     Fortran Note:
1548d382aafbSBarry Smith     This routine is not supported in Fortran.
1549d382aafbSBarry Smith 
1550d382aafbSBarry Smith     Concepts: error messages^printing
1551d382aafbSBarry Smith     Concepts: printing^error messages
1552d382aafbSBarry Smith 
1553c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1554d382aafbSBarry Smith M*/
15557087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1556d382aafbSBarry Smith 
1557d382aafbSBarry Smith /*MC
1558d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1559d382aafbSBarry Smith 
1560d382aafbSBarry Smith    Synopsis:
1561d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1562d382aafbSBarry Smith 
1563eca87e8dSBarry Smith     Not Collective
1564eca87e8dSBarry Smith 
1565d382aafbSBarry Smith     Input Parameters:
1566d382aafbSBarry Smith .   format - the usual printf() format string
1567d382aafbSBarry Smith 
1568d382aafbSBarry Smith    Level: developer
1569d382aafbSBarry Smith 
1570d382aafbSBarry Smith     Fortran Note:
1571d382aafbSBarry Smith     This routine is not supported in Fortran.
1572d382aafbSBarry Smith 
1573d382aafbSBarry Smith     Concepts: help messages^printing
1574d382aafbSBarry Smith     Concepts: printing^help messages
1575d382aafbSBarry Smith 
1576d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1577d382aafbSBarry Smith M*/
15787087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1579d382aafbSBarry Smith 
1580fcfd50ebSBarry Smith /*
1581fcfd50ebSBarry Smith      Defines PETSc profiling.
1582fcfd50ebSBarry Smith */
1583fcfd50ebSBarry Smith #include "petsclog.h"
1584fcfd50ebSBarry Smith 
1585fcfd50ebSBarry Smith /*
1586fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1587fcfd50ebSBarry Smith */
1588fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1589fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1590fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1591fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1592fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1593fcfd50ebSBarry Smith #else
1594fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1595fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1596fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1597fcfd50ebSBarry Smith #endif
1598fcfd50ebSBarry Smith 
1599fcfd50ebSBarry Smith /*
1600fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1601fcfd50ebSBarry Smith */
1602fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1603fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1604fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1605fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1606fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1607fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1608257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1609fcfd50ebSBarry Smith 
1610fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1611fcfd50ebSBarry Smith #include <stdarg.h>
1612fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1613fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1614fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1615fcfd50ebSBarry Smith 
1616fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1617fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1618fcfd50ebSBarry Smith #endif
1619fcfd50ebSBarry Smith 
162009573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
162109573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
162209573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1623d382aafbSBarry Smith 
1624d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16257087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16267087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1627d382aafbSBarry Smith #endif
1628d382aafbSBarry Smith 
16297087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16307087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16317087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16327087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16337087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16347087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16357087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1636d382aafbSBarry Smith 
16377087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1638d382aafbSBarry Smith 
1639d382aafbSBarry Smith /*S
1640d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1641d382aafbSBarry Smith 
1642d382aafbSBarry Smith    Level: advanced
1643d382aafbSBarry Smith 
1644d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1645d382aafbSBarry Smith S*/
16467087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1647d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16487087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16497087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1650fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16517087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16527087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1653d382aafbSBarry Smith 
1654d382aafbSBarry Smith /*
1655d382aafbSBarry Smith    For use in debuggers
1656d382aafbSBarry Smith */
16577087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
16587087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
16597087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
16607087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
16617087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1662d382aafbSBarry Smith 
1663d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1664d382aafbSBarry Smith #include <memory.h>
1665d382aafbSBarry Smith #endif
1666d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1667d382aafbSBarry Smith #include <stdlib.h>
1668d382aafbSBarry Smith #endif
1669d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1670d382aafbSBarry Smith #include <strings.h>
1671d382aafbSBarry Smith #endif
1672d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1673d382aafbSBarry Smith #include <string.h>
1674d382aafbSBarry Smith #endif
16756c7e564aSBarry Smith 
16764a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1677d382aafbSBarry Smith #include <xmmintrin.h>
1678d382aafbSBarry Smith #endif
1679d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1680d382aafbSBarry Smith #include <stdint.h>
1681d382aafbSBarry Smith #endif
1682d382aafbSBarry Smith 
1683fcfd50ebSBarry Smith #undef __FUNCT__
1684fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1685d382aafbSBarry Smith /*@C
1686d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1687d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1688d382aafbSBarry Smith    PetscMemmove() in that case.
1689d382aafbSBarry Smith 
1690d382aafbSBarry Smith    Not Collective
1691d382aafbSBarry Smith 
1692d382aafbSBarry Smith    Input Parameters:
1693d382aafbSBarry Smith +  b - pointer to initial memory space
1694d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1695d382aafbSBarry Smith 
1696d382aafbSBarry Smith    Output Parameter:
1697d382aafbSBarry Smith .  a - pointer to copy space
1698d382aafbSBarry Smith 
1699d382aafbSBarry Smith    Level: intermediate
1700d382aafbSBarry Smith 
1701d382aafbSBarry Smith    Compile Option:
1702d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1703d382aafbSBarry Smith                                   for memory copies on double precision values.
1704d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1705d382aafbSBarry Smith                                   for memory copies on double precision values.
1706d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1707d382aafbSBarry Smith                                   for memory copies on double precision values.
1708d382aafbSBarry Smith 
1709d382aafbSBarry Smith    Note:
1710d382aafbSBarry Smith    This routine is analogous to memcpy().
1711d382aafbSBarry Smith 
1712503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1713503cfb0cSBarry Smith 
1714d382aafbSBarry Smith   Concepts: memory^copying
1715d382aafbSBarry Smith   Concepts: copying^memory
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith .seealso: PetscMemmove()
1718d382aafbSBarry Smith 
1719d382aafbSBarry Smith @*/
17207087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1721d382aafbSBarry Smith {
1722d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1723d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1724d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1725a7e36092SMatthew G Knepley   PetscFunctionBegin;
1726e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1727e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1728a7e36092SMatthew G Knepley #else
1729d382aafbSBarry Smith   PetscFunctionBegin;
1730a7e36092SMatthew G Knepley #endif
1731d382aafbSBarry Smith   if (a != b) {
1732d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1733e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1734d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1735d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1736d382aafbSBarry Smith #endif
1737d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1738d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1739d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1740d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1741d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1742d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1743d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1744d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1745d382aafbSBarry Smith #else
1746d382aafbSBarry Smith       size_t      i;
1747d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1748d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1749d382aafbSBarry Smith #endif
1750d382aafbSBarry Smith     } else {
1751d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1752d382aafbSBarry Smith     }
1753d382aafbSBarry Smith #else
1754d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1755d382aafbSBarry Smith #endif
1756d382aafbSBarry Smith   }
1757d382aafbSBarry Smith   PetscFunctionReturn(0);
1758d382aafbSBarry Smith }
1759d382aafbSBarry Smith 
1760d382aafbSBarry Smith /*@C
1761d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1762d382aafbSBarry Smith 
1763d382aafbSBarry Smith    Not Collective
1764d382aafbSBarry Smith 
1765d382aafbSBarry Smith    Input Parameters:
1766d382aafbSBarry Smith +  a - pointer to beginning memory location
1767d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1768d382aafbSBarry Smith 
1769d382aafbSBarry Smith    Level: intermediate
1770d382aafbSBarry Smith 
1771d382aafbSBarry Smith    Compile Option:
1772d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1773d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1774d382aafbSBarry Smith 
1775503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1776503cfb0cSBarry Smith 
1777d382aafbSBarry Smith    Concepts: memory^zeroing
1778d382aafbSBarry Smith    Concepts: zeroing^memory
1779d382aafbSBarry Smith 
1780d382aafbSBarry Smith .seealso: PetscMemcpy()
1781d382aafbSBarry Smith @*/
17827087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1783d382aafbSBarry Smith {
1784d382aafbSBarry Smith   if (n > 0) {
1785d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1786e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1787d382aafbSBarry Smith #endif
1788d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1789d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1790d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1791d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1792d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1793d382aafbSBarry Smith     } else {
1794d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1795d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1796d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1797d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1798d382aafbSBarry Smith     } else {
1799d382aafbSBarry Smith #endif
1800d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1801d382aafbSBarry Smith       bzero((char *)a,n);
1802d382aafbSBarry Smith #else
1803d382aafbSBarry Smith       memset((char*)a,0,n);
1804d382aafbSBarry Smith #endif
1805d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1806d382aafbSBarry Smith     }
1807d382aafbSBarry Smith #endif
1808d382aafbSBarry Smith   }
1809d382aafbSBarry Smith   return 0;
1810d382aafbSBarry Smith }
1811d382aafbSBarry Smith 
1812d382aafbSBarry Smith /*MC
1813d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1814d382aafbSBarry Smith 
1815eca87e8dSBarry Smith    Synopsis:
1816eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1817eca87e8dSBarry Smith 
1818d382aafbSBarry Smith    Not Collective
1819d382aafbSBarry Smith 
1820d382aafbSBarry Smith    Input Parameters:
1821d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1822d382aafbSBarry Smith .  n - number of elements to fetch
1823d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
182450d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1825d382aafbSBarry Smith 
1826d382aafbSBarry Smith    Level: developer
1827d382aafbSBarry Smith 
1828d382aafbSBarry Smith    Notes:
1829d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1830d382aafbSBarry Smith 
183150d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
183250d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
183350d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
183463cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
183563cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
183663cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1837d382aafbSBarry Smith 
1838d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1839d382aafbSBarry Smith    address).
1840d382aafbSBarry Smith 
1841d382aafbSBarry Smith    Concepts: memory
1842d382aafbSBarry Smith M*/
1843d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1844d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1845d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1846d382aafbSBarry Smith   } while (0)
1847d382aafbSBarry Smith 
1848d382aafbSBarry Smith /*
1849e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1850d382aafbSBarry Smith */
1851d382aafbSBarry Smith #include "petscmatlab.h"
1852d382aafbSBarry Smith 
1853d382aafbSBarry Smith /*
1854d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1855d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1856d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1857d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1858e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1859d382aafbSBarry Smith */
1860d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1861d382aafbSBarry Smith 
1862d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1863d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1864d382aafbSBarry Smith #endif
1865d382aafbSBarry Smith 
18665a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18675a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1868d382aafbSBarry Smith #endif
1869d382aafbSBarry Smith 
1870d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1871d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1872d382aafbSBarry Smith #endif
1873d382aafbSBarry Smith 
1874d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1875d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1876d382aafbSBarry Smith #endif
1877d382aafbSBarry Smith 
1878d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1879d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1880d382aafbSBarry Smith #endif
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1884d382aafbSBarry Smith #endif
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1887d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1888d382aafbSBarry Smith #endif
1889d382aafbSBarry Smith 
1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1892d382aafbSBarry Smith #endif
1893d382aafbSBarry Smith 
1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1896d382aafbSBarry Smith #endif
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1900d382aafbSBarry Smith #endif
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1904d382aafbSBarry Smith #endif
1905d382aafbSBarry Smith 
1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1908d382aafbSBarry Smith #endif
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1912d382aafbSBarry Smith #endif
1913d382aafbSBarry Smith 
1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1916d382aafbSBarry Smith #endif
1917d382aafbSBarry Smith 
1918d382aafbSBarry Smith #endif
1919d382aafbSBarry Smith 
1920d382aafbSBarry Smith /*
1921d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1922d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1923d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1924d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1925d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1926d382aafbSBarry Smith */
1927d382aafbSBarry Smith #if defined(__cplusplus)
1928da861ed6SJed Brown #define PETSC_EXTERN_C extern "C"
1929d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1930d382aafbSBarry Smith #define EXTERN_C_END }
1931d382aafbSBarry Smith #else
1932da861ed6SJed Brown #define PETSC_EXTERN_C
1933d382aafbSBarry Smith #define EXTERN_C_BEGIN
1934d382aafbSBarry Smith #define EXTERN_C_END
1935d382aafbSBarry Smith #endif
1936d382aafbSBarry Smith 
1937d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith /*MC
1940d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1941d382aafbSBarry Smith         communication
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith    Level: beginner
1944d382aafbSBarry Smith 
1945d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1948d382aafbSBarry Smith M*/
1949d382aafbSBarry Smith 
1950d382aafbSBarry Smith /*MC
1951d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1952d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1953d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith 
1956d382aafbSBarry Smith    Level: beginner
1957d382aafbSBarry Smith 
1958d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1959d382aafbSBarry Smith M*/
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith /*MC
1962d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith    Level: beginner
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1967d382aafbSBarry Smith M*/
1968d382aafbSBarry Smith 
1969d382aafbSBarry Smith /*MC
1970d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1971d382aafbSBarry Smith    Level: beginner
1972d382aafbSBarry Smith 
1973d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1974d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1975d382aafbSBarry Smith 
1976d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1977d382aafbSBarry Smith M*/
1978d382aafbSBarry Smith 
1979d382aafbSBarry Smith /*MC
1980d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith    Level: beginner
1983d382aafbSBarry Smith 
1984d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1985d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1986d382aafbSBarry Smith 
1987d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1988d382aafbSBarry Smith M*/
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith /*MC
1991d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1992d382aafbSBarry Smith 
1993d382aafbSBarry Smith    Level: beginner
1994d382aafbSBarry Smith 
1995d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1996d382aafbSBarry Smith           pass this value
1997d382aafbSBarry Smith 
1998d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
1999d382aafbSBarry Smith M*/
2000d382aafbSBarry Smith 
2001d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2002d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2003d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2004d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2005d382aafbSBarry Smith #else
2006d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2007d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2008d382aafbSBarry Smith #endif
2009d382aafbSBarry Smith #endif
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2012d382aafbSBarry Smith 
2013d382aafbSBarry Smith /* Limit MPI to 32-bits */
2014d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2015d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2016d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2017d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2018d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2019d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2020d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2021d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2022d382aafbSBarry Smith 
2023d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2024e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2025e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2026eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2027eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2028d382aafbSBarry Smith 
2029d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2030e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2031eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2032d382aafbSBarry Smith #else
2033d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2034d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2035d382aafbSBarry Smith #endif
2036d382aafbSBarry Smith 
2037d382aafbSBarry Smith #else
2038d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2039d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2040d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2041d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2042d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2043d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2044d382aafbSBarry Smith #endif
2045d382aafbSBarry Smith 
2046d382aafbSBarry Smith /*
20472981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2048d382aafbSBarry Smith */
2049d382aafbSBarry Smith #if defined(hz)
2050d382aafbSBarry Smith #undef hz
2051d382aafbSBarry Smith #endif
2052d382aafbSBarry Smith 
2053d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2054d382aafbSBarry Smith 
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2057d382aafbSBarry Smith #include <limits.h>
2058d382aafbSBarry Smith #endif
2059d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2060d382aafbSBarry Smith #include <sys/param.h>
2061d382aafbSBarry Smith #endif
2062d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2063d382aafbSBarry Smith #include <sys/types.h>
2064d382aafbSBarry Smith #endif
2065d382aafbSBarry Smith #if defined(MAXPATHLEN)
2066d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2067d382aafbSBarry Smith #elif defined(MAX_PATH)
2068d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2069d382aafbSBarry Smith #elif defined(_MAX_PATH)
2070d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2071d382aafbSBarry Smith #else
2072d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2073d382aafbSBarry Smith #endif
2074d382aafbSBarry Smith 
2075d382aafbSBarry Smith /* Special support for C++ */
2076d382aafbSBarry Smith #include "petscsys.hh"
20776c7e564aSBarry Smith 
2078d382aafbSBarry Smith /*MC
2079d382aafbSBarry Smith 
2080d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2081d382aafbSBarry Smith 
2082d382aafbSBarry Smith $    1) classic Fortran 77 style
2083d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2084d382aafbSBarry Smith $       XXX variablename
2085d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2086d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2087d382aafbSBarry Smith $
2088d382aafbSBarry Smith $    2) classic Fortran 90 style
2089d1716517SSatish Balay $#include "finclude/petscXXX.h"
2090d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2091d382aafbSBarry Smith $       XXX variablename
2092d382aafbSBarry Smith $
2093d382aafbSBarry Smith $    3) Using Fortran modules
2094d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2095d382aafbSBarry Smith $         use petscXXXX
2096d382aafbSBarry Smith $       XXX variablename
2097d382aafbSBarry Smith $
2098d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2099d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2100d382aafbSBarry Smith $         use petscXXXX
2101d382aafbSBarry Smith $       type(XXX) variablename
2102e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2103d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2104d382aafbSBarry Smith 
2105d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2106d382aafbSBarry Smith 
2107d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2108d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2109d382aafbSBarry Smith $        integer variablename
2110d382aafbSBarry Smith $
2111d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2112d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2113d382aafbSBarry Smith 
2114d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2115d382aafbSBarry Smith for only a few PETSc functions.
2116d382aafbSBarry Smith 
2117d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2118d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2119d382aafbSBarry Smith you cannot have something like
2120d382aafbSBarry Smith $      PetscInt row,col
2121d382aafbSBarry Smith $      PetscScalar val
2122d382aafbSBarry Smith $        ...
2123d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2124d382aafbSBarry Smith You must instead have
2125d382aafbSBarry Smith $      PetscInt row(1),col(1)
2126d382aafbSBarry Smith $      PetscScalar val(1)
2127d382aafbSBarry Smith $        ...
2128d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2129d382aafbSBarry Smith 
2130d382aafbSBarry Smith 
2131d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2132d382aafbSBarry Smith 
2133d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2134d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2135d382aafbSBarry Smith 
2136d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2137d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2138d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2139d382aafbSBarry Smith 
2140d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2141e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2142d382aafbSBarry Smith 
2143d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2144d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2145d382aafbSBarry Smith 
2146d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2147d382aafbSBarry Smith      automatically by "make allfortranstubs".
2148d382aafbSBarry Smith 
2149e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2150d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2151d382aafbSBarry Smith      include their predecessors
2152d382aafbSBarry Smith 
2153d382aafbSBarry Smith     Level: beginner
2154d382aafbSBarry Smith 
2155d382aafbSBarry Smith M*/
2156d382aafbSBarry Smith 
21577087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
21587087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
21597087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
21607087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
21617087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
21627087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2163d382aafbSBarry Smith 
21647087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
21657087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
21667087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
21677087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
21687087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2169d7aa01a8SHong Zhang extern PetscErrorCode  PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
21707087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
21717087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
21727087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
21737087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
21747087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
21757087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
21767087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
21779b67c4b3SDmitry Karpeev extern PetscErrorCode  PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2178d382aafbSBarry Smith 
21797087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
21807087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2181d382aafbSBarry Smith 
218276bdecfbSBarry Smith /*J
2183d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2184d382aafbSBarry Smith        with an optional dynamic library name, for example
2185d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2186d382aafbSBarry Smith 
2187d382aafbSBarry Smith    Level: beginner
2188d382aafbSBarry Smith 
2189e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2190d382aafbSBarry Smith    with the option --download-sprng
2191d382aafbSBarry Smith 
2192d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
219376bdecfbSBarry Smith J*/
2194d382aafbSBarry Smith #define PetscRandomType char*
2195d382aafbSBarry Smith #define PETSCRAND       "rand"
2196d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2197d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2198d382aafbSBarry Smith 
2199d382aafbSBarry Smith /* Logging support */
22007087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2201d382aafbSBarry Smith 
22027087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2203d382aafbSBarry Smith 
2204d382aafbSBarry Smith /*S
2205d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2206d382aafbSBarry Smith 
2207d382aafbSBarry Smith    Level: intermediate
2208d382aafbSBarry Smith 
2209d382aafbSBarry Smith   Concepts: random numbers
2210d382aafbSBarry Smith 
2211d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2212d382aafbSBarry Smith S*/
2213d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2214d382aafbSBarry Smith 
2215d382aafbSBarry Smith /* Dynamic creation and loading functions */
2216d382aafbSBarry Smith extern PetscFList PetscRandomList;
2217ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2218d382aafbSBarry Smith 
22197087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22207087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22217087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22227087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22237087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22247087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22257087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22267087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2227d382aafbSBarry Smith 
2228d382aafbSBarry Smith /*MC
2229d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2230d382aafbSBarry Smith 
2231d382aafbSBarry Smith   Synopsis:
22321890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2233d382aafbSBarry Smith 
2234d382aafbSBarry Smith   Not Collective
2235d382aafbSBarry Smith 
2236d382aafbSBarry Smith   Input Parameters:
2237d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2238d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2239d382aafbSBarry Smith . func_name   - The name of routine to create method context
2240d382aafbSBarry Smith - create_func - The creation routine itself
2241d382aafbSBarry Smith 
2242d382aafbSBarry Smith   Notes:
2243d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2244d382aafbSBarry Smith 
2245d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2246d382aafbSBarry Smith 
2247d382aafbSBarry Smith   Sample usage:
2248d382aafbSBarry Smith .vb
2249d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2250d382aafbSBarry Smith .ve
2251d382aafbSBarry Smith 
2252d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2253d382aafbSBarry Smith .vb
2254d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2255d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2256d382aafbSBarry Smith .ve
2257d382aafbSBarry Smith    or at runtime via the option
2258d382aafbSBarry Smith .vb
2259d382aafbSBarry Smith     -random_type my_random_name
2260d382aafbSBarry Smith .ve
2261d382aafbSBarry Smith 
2262d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2263d382aafbSBarry Smith 
2264d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2265d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2266d382aafbSBarry Smith 
2267d382aafbSBarry Smith   Level: advanced
2268d382aafbSBarry Smith 
2269d382aafbSBarry Smith .keywords: PetscRandom, register
2270d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2271d382aafbSBarry Smith M*/
2272d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2273d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2274d382aafbSBarry Smith #else
2275d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2276d382aafbSBarry Smith #endif
2277d382aafbSBarry Smith 
22787087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
22797087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
22807087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
22817087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
22827087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
22837087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
22847087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
22857087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2286fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2287d382aafbSBarry Smith 
22887087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
22897087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
22907087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
22917087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
22927087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
22937087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
22947087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2295d382aafbSBarry Smith 
22967087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
22977087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
22987087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
22997087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23007087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23017087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23027087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23037087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23047087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23057087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23067087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23077087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23087087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2309d382aafbSBarry Smith 
2310d382aafbSBarry Smith /*
2311d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2312d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2313d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2314d382aafbSBarry Smith   PetscBinarySeek().
2315d382aafbSBarry Smith */
2316d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2317d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2318d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2319d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2320d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2321d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2322d382aafbSBarry Smith 
2323d382aafbSBarry Smith /*E
2324d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2325d382aafbSBarry Smith 
2326d382aafbSBarry Smith   Level: advanced
2327d382aafbSBarry Smith 
2328d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2329d382aafbSBarry Smith E*/
2330d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23317087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23327087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
233346090da6SBarry Smith extern PetscErrorCode  PetscByteSwap(void *,PetscDataType,PetscInt);
2334d382aafbSBarry Smith 
23357087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23367087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23377087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23387c764164SBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(const char*);
23397087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23407087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2341d382aafbSBarry Smith 
23427087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23437087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23447087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23457087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23467087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2347d382aafbSBarry Smith 
23487087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2349d382aafbSBarry Smith 
2350d382aafbSBarry Smith /*E
2351d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2352d382aafbSBarry Smith 
2353d382aafbSBarry Smith   Level: beginner
2354d382aafbSBarry Smith 
2355d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2356d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2357d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2358d382aafbSBarry Smith E*/
235911f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2360d382aafbSBarry Smith 
2361d382aafbSBarry Smith /*MC
2362d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2363d382aafbSBarry Smith 
2364d382aafbSBarry Smith     Level: beginner
2365d382aafbSBarry Smith 
2366d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2367eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2368eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2369d382aafbSBarry Smith 
2370d382aafbSBarry Smith M*/
2371d382aafbSBarry Smith 
2372d382aafbSBarry Smith /*MC
2373d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2374d382aafbSBarry Smith                 value into that location
2375d382aafbSBarry Smith 
2376d382aafbSBarry Smith     Level: beginner
2377d382aafbSBarry Smith 
2378d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2379eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2380eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith M*/
2383d382aafbSBarry Smith 
2384d382aafbSBarry Smith /*MC
2385d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2386d382aafbSBarry Smith 
2387d382aafbSBarry Smith     Level: beginner
2388d382aafbSBarry Smith 
2389d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2390d382aafbSBarry Smith 
2391d382aafbSBarry Smith M*/
2392d382aafbSBarry Smith 
2393d382aafbSBarry Smith /*S
2394d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2395d382aafbSBarry Smith 
2396d382aafbSBarry Smith    Level: advanced
2397d382aafbSBarry Smith 
2398d382aafbSBarry Smith    Concepts: communicator, create
2399d382aafbSBarry Smith S*/
2400d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2401d382aafbSBarry Smith 
2402d382aafbSBarry Smith struct _n_PetscSubcomm {
2403d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2404d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2405d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2406d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2407d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2408d382aafbSBarry Smith };
2409d382aafbSBarry Smith 
2410638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2411638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2412638faf0bSHong Zhang 
24137087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2414fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24157087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24167c764164SBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
24177087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2418d382aafbSBarry Smith 
241982a7e548SBarry Smith #include <petscctable.h>
242082a7e548SBarry Smith 
2421d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24226c7e564aSBarry Smith 
24239e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24249e03d832SJed Brown #undef __FUNCT__
24259e03d832SJed Brown #define __FUNCT__ "User provided function"
24269e03d832SJed Brown 
2427d382aafbSBarry Smith #endif
2428