1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1720c24465SJunchao Zhang #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) || defined(PETSC_HAVE_KOKKOS) 1805035670SJunchao Zhang #define PETSC_HAVE_DEVICE 1905035670SJunchao Zhang #endif 2005035670SJunchao Zhang 2173fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2273fca5a0SBarry Smith /* 2373fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2473fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2573fca5a0SBarry Smith */ 26216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2773fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2873fca5a0SBarry Smith # endif 29216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3073fca5a0SBarry Smith # define _BSD_SOURCE 3173fca5a0SBarry Smith # endif 3207f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3307f00807SSatish Balay # define _DEFAULT_SOURCE 3407f00807SSatish Balay # endif 35ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 36ea0fecefSShri Abhyankar # define _GNU_SOURCE 37ea0fecefSShri Abhyankar # endif 3873fca5a0SBarry Smith #endif 3973fca5a0SBarry Smith 40df4397b0SStefano Zampini #include <petscsystypes.h> 41df4397b0SStefano Zampini 42d382aafbSBarry Smith /* ========================================================================== */ 43d382aafbSBarry Smith /* 442c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 45d382aafbSBarry Smith */ 461ec50b02SJed Brown #if defined(__cplusplus) 471ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 481ec50b02SJed Brown #else 491ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 501ec50b02SJed Brown #endif 51d382aafbSBarry Smith 52c5e4d11fSDmitry Karpeev /* ========================================================================== */ 53c5e4d11fSDmitry Karpeev /* 54c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 551cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 561cc8b206SBarry Smith file within an extern "C". 57c5e4d11fSDmitry Karpeev */ 58c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 59c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 60c5e4d11fSDmitry Karpeev #endif 61c5e4d11fSDmitry Karpeev 62ed938b00SJed Brown #if defined(__cplusplus) 63ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 64ed938b00SJed Brown #else 65ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 66ed938b00SJed Brown #endif 67ed938b00SJed Brown 68ed938b00SJed Brown #if defined(__cplusplus) 6958c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 70ed938b00SJed Brown #else 7158c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 72ed938b00SJed Brown #endif 73ed938b00SJed Brown 7458c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7558c433abSLisandro Dalcin 76ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 77014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 78014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7921f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 8126703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 8226703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8326703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8426703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 85014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 86014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 88d382aafbSBarry Smith #else 89014dd563SJed Brown # define PETSC_DLLEXPORT 90014dd563SJed Brown # define PETSC_DLLIMPORT 9121f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 92014dd563SJed Brown #endif 93014dd563SJed Brown 94014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 95014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 96014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 97014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 98014dd563SJed Brown #endif 99014dd563SJed Brown 1001cc8b206SBarry Smith /* 1011cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 1021cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 1031cc8b206SBarry Smith used from C and are always visible in the shared libraries 1041cc8b206SBarry Smith */ 1052c280183SJed Brown #if defined(__cplusplus) 106014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10821f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 109014dd563SJed Brown #else 110014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 111638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1126258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 113d382aafbSBarry Smith #endif 11427710113SBarry Smith 1152c8e378dSBarry Smith #include <petscversion.h> 116a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 117d382aafbSBarry Smith 118d382aafbSBarry Smith /* ========================================================================== */ 119d382aafbSBarry Smith 120d382aafbSBarry Smith /* 121d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 122d382aafbSBarry Smith 123d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 124d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 125d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 126d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 127d382aafbSBarry Smith mpicxx.h directly in their code 128d382aafbSBarry Smith */ 129fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 130d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 131fa9e63e2SJed Brown #endif 132fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 133d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 134fa9e63e2SJed Brown #endif 135e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 136e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 137e771154cSJed Brown #else 1382c8e378dSBarry Smith # include <mpi.h> 139e771154cSJed Brown #endif 14065013866SBarry Smith 1414e1ad211SJed Brown /*MC 1424e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1434e1ad211SJed Brown 1444e1ad211SJed Brown Notes: 1451393a3abSPatrick Sanan The prefix "PETSC_" is added to the argument. 1461393a3abSPatrick Sanan 1474e1ad211SJed Brown Typical usage is within normal code, 1484e1ad211SJed Brown 1494e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1504e1ad211SJed Brown 1514e1ad211SJed Brown but can also be used in the preprocessor, 1524e1ad211SJed Brown 1534e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1544e1ad211SJed Brown $ ... 1554e1ad211SJed Brown $ #else 1564e1ad211SJed Brown 1571393a3abSPatrick Sanan Either way, it evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1), and false if PETSC_USE_DEBUG is undefined. This macro 1584e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1594e1ad211SJed Brown 1601393a3abSPatrick Sanan To avoid prepending "PETSC_", say to add custom checks in user code, one can use e.g. 1611393a3abSPatrick Sanan 1621393a3abSPatrick Sanan $ #define FooDefined(d) PetscDefined_(FOO_ ## d) 1631393a3abSPatrick Sanan 1644e1ad211SJed Brown Developer Notes: 1654e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1664e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1674e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1684e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1694e1ad211SJed Brown 1704e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1714e1ad211SJed Brown implementation of variadic macros. 1724e1ad211SJed Brown 1734e1ad211SJed Brown Level: developer 1744e1ad211SJed Brown M*/ 1754e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1764e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1774e1ad211SJed Brown # define PetscDefined_arg_ shift, 1784e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1794e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1804e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1814e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1824e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1834e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1844e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1854e1ad211SJed Brown #endif 1864e1ad211SJed Brown 187d382aafbSBarry Smith /* 188a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 189a7886beaSBarry Smith This usually happens because 190a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 191a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 192a7886beaSBarry Smith */ 193a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 194c9b973beSBarry Smith # if !defined(MPIUNI_H) 195a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 196a7886beaSBarry Smith # endif 19741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 19841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 19941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 20041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 20141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 20241f4af4cSSatish Balay # endif 20341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 20441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 20541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 20641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 20741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 20841f4af4cSSatish Balay # endif 209a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 21041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 211a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 212ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 213a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 214a7886beaSBarry Smith # endif 215a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 216a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 217a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 218ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 219c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 220a7886beaSBarry Smith # endif 221d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 222d97fd468SStefano Zampini # if !defined(MSMPI_VER) 223d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 224d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 225d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 226d97fd468SStefano Zampini # endif 227d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 228d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 229a7886beaSBarry Smith #endif 230a7886beaSBarry Smith 231a7886beaSBarry Smith /* 2322981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 233d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 234d382aafbSBarry Smith */ 235d382aafbSBarry Smith #include <stdio.h> 236d382aafbSBarry Smith 237d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 238d382aafbSBarry Smith #if !defined(MPIAPI) 239d382aafbSBarry Smith #define MPIAPI 240d382aafbSBarry Smith #endif 241d382aafbSBarry Smith 2421cc8b206SBarry Smith /* 2431cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2441cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2451cc8b206SBarry Smith does not match the actual type of the argument being passed in 2461cc8b206SBarry Smith */ 247c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 248894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 249894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2508ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2518ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 252894dd566SJed Brown # endif 253894dd566SJed Brown #endif 254894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 255894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2568ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2578ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 258894dd566SJed Brown #endif 259b3506946SBarry Smith 2605a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 261df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 262e28ce29aSPatrick Sanan 263e28ce29aSPatrick Sanan /*MC 264e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 265e28ce29aSPatrick Sanan 266e28ce29aSPatrick Sanan Notes: 267e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 268e28ce29aSPatrick Sanan 269e28ce29aSPatrick Sanan Level: beginner 270e28ce29aSPatrick Sanan 271e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 272e28ce29aSPatrick Sanan M*/ 273e28ce29aSPatrick Sanan 27437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 275bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 276a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 277fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 278bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 279a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 280f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 281bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 282a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 283236ed0a3SSatish Balay #else 284bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 285236ed0a3SSatish Balay #endif 286b7b8f77aSBarry Smith 2877cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 288b7b8f77aSBarry Smith 289d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 290bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 291a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 292d382aafbSBarry Smith #else 293d382aafbSBarry Smith # define MPIU_INT MPI_INT 294a05e1a72SSatish Balay # define PetscInt_FMT "d" 295d382aafbSBarry Smith #endif 296d382aafbSBarry Smith 297503cfb0cSBarry Smith /* 298503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 299503cfb0cSBarry Smith */ 300e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 301d382aafbSBarry Smith 302d382aafbSBarry Smith /* 303d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 304d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 305d382aafbSBarry Smith */ 306014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 307d382aafbSBarry Smith 308d382aafbSBarry Smith /* 309d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 310d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 311d382aafbSBarry Smith */ 312014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 313d382aafbSBarry Smith 314d382aafbSBarry Smith /*MC 315d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 316d382aafbSBarry Smith 317d382aafbSBarry Smith Synopsis: 318aaa7dc30SBarry Smith #include <petscsys.h> 319ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 320d382aafbSBarry Smith 321eca87e8dSBarry Smith Not Collective 322eca87e8dSBarry Smith 323d382aafbSBarry Smith Input Parameters: 324d382aafbSBarry Smith . cond - condition or expression 325d382aafbSBarry Smith 326e28ce29aSPatrick Sanan Notes: 327e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 328d382aafbSBarry Smith branch is unlikely. 329d382aafbSBarry Smith 330d382aafbSBarry Smith Level: advanced 331d382aafbSBarry Smith 332cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 333d382aafbSBarry Smith M*/ 334d382aafbSBarry Smith 335d382aafbSBarry Smith /*MC 336d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 337d382aafbSBarry Smith 338d382aafbSBarry Smith Synopsis: 339aaa7dc30SBarry Smith #include <petscsys.h> 34023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 341d382aafbSBarry Smith 342eca87e8dSBarry Smith Not Collective 343eca87e8dSBarry Smith 344d382aafbSBarry Smith Input Parameters: 345d382aafbSBarry Smith . cond - condition or expression 346d382aafbSBarry Smith 347e28ce29aSPatrick Sanan Notes: 348e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 349d382aafbSBarry Smith branch is likely. 350d382aafbSBarry Smith 351d382aafbSBarry Smith Level: advanced 352d382aafbSBarry Smith 353d382aafbSBarry Smith .seealso: PetscUnlikely() 354d382aafbSBarry Smith M*/ 355d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 356d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 357d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 358d382aafbSBarry Smith #else 359cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 360cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 361d382aafbSBarry Smith #endif 362d382aafbSBarry Smith 363cf9c20a2SJed Brown /*MC 364cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 365cf9c20a2SJed Brown 366cf9c20a2SJed Brown Synopsis: 367cf9c20a2SJed Brown #include <petscsys.h> 368cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 369cf9c20a2SJed Brown 370cf9c20a2SJed Brown Not Collective 371cf9c20a2SJed Brown 372cf9c20a2SJed Brown Input Parameters: 373cf9c20a2SJed Brown . cond - condition or expression 374cf9c20a2SJed Brown 375cf9c20a2SJed Brown Notes: 376cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 377cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 378cf9c20a2SJed Brown 379cf9c20a2SJed Brown Level: advanced 380cf9c20a2SJed Brown 381cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 382cf9c20a2SJed Brown M*/ 383cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 384cf9c20a2SJed Brown 385c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 386c8b9133aSSatish Balay 387c8b9133aSSatish Balay #if defined(__INTEL_COMPILER) && !defined(_WIN32) 388c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("vector") 3891dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 390c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("GCC ivdep") 391160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && !defined(_WIN32) 392c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("omp simd") 393160a5775SAli Reza Khaz'ali #elif defined(_OPENMP) && _OPENMP >= 201307 && defined(_WIN32) 394160a5775SAli Reza Khaz'ali # define PetscPragmaSIMD __pragma(omp simd) 395c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 396c8b9133aSSatish Balay # define PetscPragmaSIMD _Pragma("_CRI ivdep") 397c8b9133aSSatish Balay #else 398c8b9133aSSatish Balay # define PetscPragmaSIMD 399c8b9133aSSatish Balay #endif 400c8b9133aSSatish Balay 401d382aafbSBarry Smith /* 402d382aafbSBarry Smith Declare extern C stuff after including external header files 403d382aafbSBarry Smith */ 404d382aafbSBarry Smith 4056a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 40670b3c8c7SBarry Smith 4078b49ba18SBarry Smith /* 408390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 4098b49ba18SBarry Smith */ 4108b49ba18SBarry Smith #include <petscmath.h> 4118b49ba18SBarry Smith 4126a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 413d382aafbSBarry Smith 414d382aafbSBarry Smith /*MC 4150298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 416d382aafbSBarry Smith 417d382aafbSBarry Smith Level: beginner 418d382aafbSBarry Smith 419e28ce29aSPatrick Sanan Note: 420e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 421d382aafbSBarry Smith some default 422d382aafbSBarry Smith 423e28ce29aSPatrick Sanan Fortran Notes: 424e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 425d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 426d382aafbSBarry Smith 427e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 428d382aafbSBarry Smith 429d382aafbSBarry Smith M*/ 4300298fd71SBarry Smith #define PETSC_IGNORE NULL 431d382aafbSBarry Smith 432c528d872SBarry Smith /* This is deprecated */ 433c528d872SBarry Smith #define PETSC_NULL NULL 434c528d872SBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 442557d4da8SBarry Smith 443557d4da8SBarry Smith M*/ 444557d4da8SBarry Smith #define PETSC_DECIDE -1 445557d4da8SBarry Smith 446557d4da8SBarry Smith /*MC 447d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 448d382aafbSBarry Smith where you wish PETSc to compute the required value. 449d382aafbSBarry Smith 450d382aafbSBarry Smith Level: beginner 451d382aafbSBarry Smith 452e28ce29aSPatrick Sanan Developer Note: 453e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 454557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 455557d4da8SBarry Smith 4560298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 457d382aafbSBarry Smith 458d382aafbSBarry Smith M*/ 459d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 460d382aafbSBarry Smith 461d382aafbSBarry Smith /*MC 462557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 463557d4da8SBarry Smith where you wish PETSc to use the default. 464557d4da8SBarry Smith 465557d4da8SBarry Smith Level: beginner 466557d4da8SBarry Smith 467e28ce29aSPatrick Sanan Fortran Notes: 468e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 469557d4da8SBarry Smith 4700298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 471557d4da8SBarry Smith 472557d4da8SBarry Smith M*/ 473557d4da8SBarry Smith #define PETSC_DEFAULT -2 474557d4da8SBarry Smith 475557d4da8SBarry Smith /*MC 476d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 477ea8fe74dSBarry Smith all the processes that PETSc knows about. 478d382aafbSBarry Smith 479d382aafbSBarry Smith Level: beginner 480d382aafbSBarry Smith 481e28ce29aSPatrick Sanan Notes: 482e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 483d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 484d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 485a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 486a990b902SBarry Smith 487a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 488a990b902SBarry Smith is called because it may not have a valid value yet. 489d382aafbSBarry Smith 490d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith M*/ 493014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 494d382aafbSBarry Smith 495d382aafbSBarry Smith /*MC 496503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 497d382aafbSBarry Smith 498d382aafbSBarry Smith Level: beginner 499d382aafbSBarry Smith 500e28ce29aSPatrick Sanan Notes: 501e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 502a990b902SBarry Smith 503d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 504d382aafbSBarry Smith 505d382aafbSBarry Smith M*/ 506d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 507d382aafbSBarry Smith 5086de5d289SStefano Zampini /*MC 5096de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 5106de5d289SStefano Zampini MPI with MPI_Init_thread. 5116de5d289SStefano Zampini 5126de5d289SStefano Zampini Level: beginner 5136de5d289SStefano Zampini 5146de5d289SStefano Zampini Notes: 5156de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 5166de5d289SStefano Zampini 5176de5d289SStefano Zampini .seealso: PetscInitialize() 5186de5d289SStefano Zampini 5196de5d289SStefano Zampini M*/ 5206de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 5216de5d289SStefano Zampini 522d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 5238ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 524014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 525014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5264cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 527d382aafbSBarry Smith 528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 531d382aafbSBarry Smith 5327381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 53305035670SJunchao Zhang PETSC_EXTERN PetscBool PetscCUDASynchronize; 534cae85d06SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm,PetscInt); 5353c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCUDAInitializeCheck(void); 5367381773fSBarry Smith #endif 5377381773fSBarry Smith 53805035670SJunchao Zhang #if defined(PETSC_HAVE_HIP) 53905035670SJunchao Zhang PETSC_EXTERN PetscBool PetscHIPSynchronize; 54005035670SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitialize(MPI_Comm,PetscInt); 5413c7e804fSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscHIPInitializeCheck(void); 54205035670SJunchao Zhang #endif 54305035670SJunchao Zhang 54459e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 54559e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 54659e55d94SJunchao Zhang #endif 54759e55d94SJunchao Zhang 54871438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 54971438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 55071438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 55171438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 55271438e86SJunchao Zhang #endif 55371438e86SJunchao Zhang 554540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 555540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 556540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 557540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 558540e20f2SPierre Jolivet #endif 559540e20f2SPierre Jolivet 560d382aafbSBarry Smith /*MC 56195dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 562d382aafbSBarry Smith 563eca87e8dSBarry Smith Synopsis: 564aaa7dc30SBarry Smith #include <petscsys.h> 565eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 566eca87e8dSBarry Smith 567eca87e8dSBarry Smith Not Collective 568eca87e8dSBarry Smith 569d382aafbSBarry Smith Input Parameter: 570d382aafbSBarry Smith . m - number of bytes to allocate 571d382aafbSBarry Smith 572d382aafbSBarry Smith Output Parameter: 573d382aafbSBarry Smith . result - memory allocated 574d382aafbSBarry Smith 575d382aafbSBarry Smith Level: beginner 576d382aafbSBarry Smith 57749d7da52SJed Brown Notes: 57849d7da52SJed Brown Memory is always allocated at least double aligned 579d382aafbSBarry Smith 58049d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 581d382aafbSBarry Smith 582d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 583d382aafbSBarry Smith 584d382aafbSBarry Smith M*/ 585071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 586d382aafbSBarry Smith 587d382aafbSBarry Smith /*MC 5883221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5893221ece2SMatthew G. Knepley 5903221ece2SMatthew G. Knepley Synopsis: 5913221ece2SMatthew G. Knepley #include <petscsys.h> 5923221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5933221ece2SMatthew G. Knepley 5943221ece2SMatthew G. Knepley Not Collective 5953221ece2SMatthew G. Knepley 5963221ece2SMatthew G. Knepley Input Parameters: 5973221ece2SMatthew G. Knepley + m - number of bytes to allocate 59892f119d6SBarry Smith - result - previous memory 5993221ece2SMatthew G. Knepley 6003221ece2SMatthew G. Knepley Output Parameter: 6013221ece2SMatthew G. Knepley . result - new memory allocated 6023221ece2SMatthew G. Knepley 6033221ece2SMatthew G. Knepley Level: developer 6043221ece2SMatthew G. Knepley 6053221ece2SMatthew G. Knepley Notes: 6063221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 6073221ece2SMatthew G. Knepley 6083221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 6093221ece2SMatthew G. Knepley 6103221ece2SMatthew G. Knepley M*/ 6113221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 6123221ece2SMatthew G. Knepley 6133221ece2SMatthew G. Knepley /*MC 614503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 615d382aafbSBarry Smith 616d382aafbSBarry Smith Synopsis: 617aaa7dc30SBarry Smith #include <petscsys.h> 618d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 619d382aafbSBarry Smith 620eca87e8dSBarry Smith Not Collective 621eca87e8dSBarry Smith 622eca87e8dSBarry Smith Input Parameters: 623eca87e8dSBarry Smith . addr - address to align (any pointer type) 624eca87e8dSBarry Smith 625d382aafbSBarry Smith Level: developer 626d382aafbSBarry Smith 627d382aafbSBarry Smith .seealso: PetscMallocAlign() 628d382aafbSBarry Smith 629d382aafbSBarry Smith M*/ 630d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 631d382aafbSBarry Smith 632d382aafbSBarry Smith /*MC 6338f51dc47SJunchao Zhang PetscCalloc - Allocates a cleared (zeroed) memory region aligned to PETSC_MEMALIGN 6348f51dc47SJunchao Zhang 6358f51dc47SJunchao Zhang Synopsis: 6368f51dc47SJunchao Zhang #include <petscsys.h> 6378f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 6388f51dc47SJunchao Zhang 6398f51dc47SJunchao Zhang Not Collective 6408f51dc47SJunchao Zhang 6418f51dc47SJunchao Zhang Input Parameter: 6428f51dc47SJunchao Zhang . m - number of bytes to allocate 6438f51dc47SJunchao Zhang 6448f51dc47SJunchao Zhang Output Parameter: 6458f51dc47SJunchao Zhang . result - memory allocated 6468f51dc47SJunchao Zhang 6478f51dc47SJunchao Zhang Level: beginner 6488f51dc47SJunchao Zhang 6498f51dc47SJunchao Zhang Notes: 6508f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 6518f51dc47SJunchao Zhang 6528f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 6538f51dc47SJunchao Zhang 6548f51dc47SJunchao Zhang .seealso: PetscFree(), PetscNew() 6558f51dc47SJunchao Zhang 6568f51dc47SJunchao Zhang M*/ 6578f51dc47SJunchao Zhang #define PetscCalloc(m,result) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m),(result)) 6588f51dc47SJunchao Zhang 6598f51dc47SJunchao Zhang /*MC 660785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 661d382aafbSBarry Smith 662eca87e8dSBarry Smith Synopsis: 663aaa7dc30SBarry Smith #include <petscsys.h> 664785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 665785e854fSJed Brown 666785e854fSJed Brown Not Collective 667785e854fSJed Brown 668785e854fSJed Brown Input Parameter: 669390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 670785e854fSJed Brown 671785e854fSJed Brown Output Parameter: 6721fe1b817SJunchao Zhang . r1 - memory allocated 673785e854fSJed Brown 674e28ce29aSPatrick Sanan Note: 675e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 676390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 677390e1bf2SBarry Smith $ PetscInt *id; 678390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 679390e1bf2SBarry Smith not 680390e1bf2SBarry Smith $ PetscInt *id; 681390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 682390e1bf2SBarry Smith 6831fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 684390e1bf2SBarry Smith 685390e1bf2SBarry Smith Level: beginner 686785e854fSJed Brown 6871795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 688785e854fSJed Brown 689785e854fSJed Brown M*/ 6902553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 691785e854fSJed Brown 692785e854fSJed Brown /*MC 6931795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6941795a4d1SJed Brown 6951795a4d1SJed Brown Synopsis: 696aaa7dc30SBarry Smith #include <petscsys.h> 6971795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6981795a4d1SJed Brown 6991795a4d1SJed Brown Not Collective 7001795a4d1SJed Brown 7011795a4d1SJed Brown Input Parameter: 7021795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 7031795a4d1SJed Brown 7041795a4d1SJed Brown Output Parameter: 7051fe1b817SJunchao Zhang . r1 - memory allocated 7061795a4d1SJed Brown 707e28ce29aSPatrick Sanan Notes: 708e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 709390e1bf2SBarry Smith 710390e1bf2SBarry Smith Level: beginner 7111795a4d1SJed Brown 7121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 7131795a4d1SJed Brown 7141795a4d1SJed Brown M*/ 7152553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 7161795a4d1SJed Brown 7171795a4d1SJed Brown /*MC 718dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 719d382aafbSBarry Smith 720eca87e8dSBarry Smith Synopsis: 721aaa7dc30SBarry Smith #include <petscsys.h> 722dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 723eca87e8dSBarry Smith 724eca87e8dSBarry Smith Not Collective 725eca87e8dSBarry Smith 726d382aafbSBarry Smith Input Parameter: 727d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 728dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 729d382aafbSBarry Smith 730d382aafbSBarry Smith Output Parameter: 731d382aafbSBarry Smith + r1 - memory allocated in first chunk 732d382aafbSBarry Smith - r2 - memory allocated in second chunk 733d382aafbSBarry Smith 734d382aafbSBarry Smith Level: developer 735d382aafbSBarry Smith 7361795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 737d382aafbSBarry Smith 738d382aafbSBarry Smith M*/ 7392553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 740d382aafbSBarry Smith 741d382aafbSBarry Smith /*MC 7421795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 743d382aafbSBarry Smith 744eca87e8dSBarry Smith Synopsis: 745aaa7dc30SBarry Smith #include <petscsys.h> 7461795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 747eca87e8dSBarry Smith 748eca87e8dSBarry Smith Not Collective 749eca87e8dSBarry Smith 750d382aafbSBarry Smith Input Parameter: 751d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 7521795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 7531795a4d1SJed Brown 7541795a4d1SJed Brown Output Parameter: 7551795a4d1SJed Brown + r1 - memory allocated in first chunk 7561795a4d1SJed Brown - r2 - memory allocated in second chunk 7571795a4d1SJed Brown 7581795a4d1SJed Brown Level: developer 7591795a4d1SJed Brown 7601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 7611795a4d1SJed Brown 7621795a4d1SJed Brown M*/ 7632553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 7641795a4d1SJed Brown 7651795a4d1SJed Brown /*MC 766dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 767d382aafbSBarry Smith 768d382aafbSBarry Smith Synopsis: 769aaa7dc30SBarry Smith #include <petscsys.h> 770dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 771d382aafbSBarry Smith 772d382aafbSBarry Smith Not Collective 773d382aafbSBarry Smith 774d382aafbSBarry Smith Input Parameter: 775d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 776d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 777dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 778d382aafbSBarry Smith 779d382aafbSBarry Smith Output Parameter: 780d382aafbSBarry Smith + r1 - memory allocated in first chunk 781d382aafbSBarry Smith . r2 - memory allocated in second chunk 782d382aafbSBarry Smith - r3 - memory allocated in third chunk 783d382aafbSBarry Smith 784d382aafbSBarry Smith Level: developer 785d382aafbSBarry Smith 7861795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 787d382aafbSBarry Smith 788d382aafbSBarry Smith M*/ 7892553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 790d382aafbSBarry Smith 791d382aafbSBarry Smith /*MC 7921795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 793d382aafbSBarry Smith 794eca87e8dSBarry Smith Synopsis: 795aaa7dc30SBarry Smith #include <petscsys.h> 7961795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 797eca87e8dSBarry Smith 798eca87e8dSBarry Smith Not Collective 799eca87e8dSBarry Smith 800d382aafbSBarry Smith Input Parameter: 801d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 802d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 8031795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 8041795a4d1SJed Brown 8051795a4d1SJed Brown Output Parameter: 8061795a4d1SJed Brown + r1 - memory allocated in first chunk 8071795a4d1SJed Brown . r2 - memory allocated in second chunk 8081795a4d1SJed Brown - r3 - memory allocated in third chunk 8091795a4d1SJed Brown 8101795a4d1SJed Brown Level: developer 8111795a4d1SJed Brown 8121795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 8131795a4d1SJed Brown 8141795a4d1SJed Brown M*/ 8152553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 8161795a4d1SJed Brown 8171795a4d1SJed Brown /*MC 818dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 819d382aafbSBarry Smith 820d382aafbSBarry Smith Synopsis: 821aaa7dc30SBarry Smith #include <petscsys.h> 822dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 823d382aafbSBarry Smith 824d382aafbSBarry Smith Not Collective 825d382aafbSBarry Smith 826d382aafbSBarry Smith Input Parameter: 827d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 828d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 829d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 830dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 831d382aafbSBarry Smith 832d382aafbSBarry Smith Output Parameter: 833d382aafbSBarry Smith + r1 - memory allocated in first chunk 834d382aafbSBarry Smith . r2 - memory allocated in second chunk 835d382aafbSBarry Smith . r3 - memory allocated in third chunk 836d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 837d382aafbSBarry Smith 838d382aafbSBarry Smith Level: developer 839d382aafbSBarry Smith 8401795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 841d382aafbSBarry Smith 842d382aafbSBarry Smith M*/ 8432553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 844d382aafbSBarry Smith 845d382aafbSBarry Smith /*MC 8461795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 847d382aafbSBarry Smith 848eca87e8dSBarry Smith Synopsis: 849aaa7dc30SBarry Smith #include <petscsys.h> 8501795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 851eca87e8dSBarry Smith 852eca87e8dSBarry Smith Not Collective 853eca87e8dSBarry Smith 854e28ce29aSPatrick Sanan Input Parameters: 855d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 856d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 857d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 8581795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 8591795a4d1SJed Brown 860e28ce29aSPatrick Sanan Output Parameters: 8611795a4d1SJed Brown + r1 - memory allocated in first chunk 8621795a4d1SJed Brown . r2 - memory allocated in second chunk 8631795a4d1SJed Brown . r3 - memory allocated in third chunk 8641795a4d1SJed Brown - r4 - memory allocated in fourth chunk 8651795a4d1SJed Brown 8661795a4d1SJed Brown Level: developer 8671795a4d1SJed Brown 8681795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 8691795a4d1SJed Brown 8701795a4d1SJed Brown M*/ 8712553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8721795a4d1SJed Brown 8731795a4d1SJed Brown /*MC 874dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 875d382aafbSBarry Smith 876d382aafbSBarry Smith Synopsis: 877aaa7dc30SBarry Smith #include <petscsys.h> 878dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 879d382aafbSBarry Smith 880d382aafbSBarry Smith Not Collective 881d382aafbSBarry Smith 882e28ce29aSPatrick Sanan Input Parameters: 883d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 884d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 885d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 886d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 887dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 888d382aafbSBarry Smith 889e28ce29aSPatrick Sanan Output Parameters: 890d382aafbSBarry Smith + r1 - memory allocated in first chunk 891d382aafbSBarry Smith . r2 - memory allocated in second chunk 892d382aafbSBarry Smith . r3 - memory allocated in third chunk 893d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 894d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 895d382aafbSBarry Smith 896d382aafbSBarry Smith Level: developer 897d382aafbSBarry Smith 8981795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 899d382aafbSBarry Smith 900d382aafbSBarry Smith M*/ 9012553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 902d382aafbSBarry Smith 903d382aafbSBarry Smith /*MC 9041795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 905d382aafbSBarry Smith 906eca87e8dSBarry Smith Synopsis: 907aaa7dc30SBarry Smith #include <petscsys.h> 9081795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 909eca87e8dSBarry Smith 910eca87e8dSBarry Smith Not Collective 911eca87e8dSBarry Smith 912e28ce29aSPatrick Sanan Input Parameters: 913d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 914d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 915d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 916d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 9171795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 9181795a4d1SJed Brown 919e28ce29aSPatrick Sanan Output Parameters: 9201795a4d1SJed Brown + r1 - memory allocated in first chunk 9211795a4d1SJed Brown . r2 - memory allocated in second chunk 9221795a4d1SJed Brown . r3 - memory allocated in third chunk 9231795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9241795a4d1SJed Brown - r5 - memory allocated in fifth chunk 9251795a4d1SJed Brown 9261795a4d1SJed Brown Level: developer 9271795a4d1SJed Brown 9281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 9291795a4d1SJed Brown 9301795a4d1SJed Brown M*/ 9312553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 932d382aafbSBarry Smith 933d382aafbSBarry Smith /*MC 934dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 935d382aafbSBarry Smith 936d382aafbSBarry Smith Synopsis: 937aaa7dc30SBarry Smith #include <petscsys.h> 938dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 939d382aafbSBarry Smith 940d382aafbSBarry Smith Not Collective 941d382aafbSBarry Smith 942e28ce29aSPatrick Sanan Input Parameters: 943d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 944d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 945d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 946d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 947d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 948dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 949d382aafbSBarry Smith 950e28ce29aSPatrick Sanan Output Parameteasr: 951d382aafbSBarry Smith + r1 - memory allocated in first chunk 952d382aafbSBarry Smith . r2 - memory allocated in second chunk 953d382aafbSBarry Smith . r3 - memory allocated in third chunk 954d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 955d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 956d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 957d382aafbSBarry Smith 958d382aafbSBarry Smith Level: developer 959d382aafbSBarry Smith 9601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 961d382aafbSBarry Smith 962d382aafbSBarry Smith M*/ 9632553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 964d382aafbSBarry Smith 965d382aafbSBarry Smith /*MC 9661795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 967d382aafbSBarry Smith 968eca87e8dSBarry Smith Synopsis: 969aaa7dc30SBarry Smith #include <petscsys.h> 9701795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 971eca87e8dSBarry Smith 972eca87e8dSBarry Smith Not Collective 973eca87e8dSBarry Smith 974e28ce29aSPatrick Sanan Input Parameters: 975d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 976d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 977d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 978d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 979d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9801795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9811795a4d1SJed Brown 982e28ce29aSPatrick Sanan Output Parameters: 9831795a4d1SJed Brown + r1 - memory allocated in first chunk 9841795a4d1SJed Brown . r2 - memory allocated in second chunk 9851795a4d1SJed Brown . r3 - memory allocated in third chunk 9861795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9871795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9881795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9891795a4d1SJed Brown 9901795a4d1SJed Brown Level: developer 9911795a4d1SJed Brown 9921795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9931795a4d1SJed Brown 9941795a4d1SJed Brown M*/ 9952553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9961795a4d1SJed Brown 9971795a4d1SJed Brown /*MC 998dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 999d382aafbSBarry Smith 1000d382aafbSBarry Smith Synopsis: 1001aaa7dc30SBarry Smith #include <petscsys.h> 1002dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 1003d382aafbSBarry Smith 1004d382aafbSBarry Smith Not Collective 1005d382aafbSBarry Smith 1006e28ce29aSPatrick Sanan Input Parameters: 1007d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 1008d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 1009d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 1010d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 1011d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 1012d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 1013dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 1014d382aafbSBarry Smith 1015e28ce29aSPatrick Sanan Output Parameters: 1016d382aafbSBarry Smith + r1 - memory allocated in first chunk 1017d382aafbSBarry Smith . r2 - memory allocated in second chunk 1018d382aafbSBarry Smith . r3 - memory allocated in third chunk 1019d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 1020d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 1021d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 1022eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith Level: developer 1025d382aafbSBarry Smith 10261795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith M*/ 10292553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 1030d382aafbSBarry Smith 1031d382aafbSBarry Smith /*MC 10321795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 10331795a4d1SJed Brown 10341795a4d1SJed Brown Synopsis: 1035aaa7dc30SBarry Smith #include <petscsys.h> 10361795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 10371795a4d1SJed Brown 10381795a4d1SJed Brown Not Collective 10391795a4d1SJed Brown 1040e28ce29aSPatrick Sanan Input Parameters: 10411795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 10421795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 10431795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 10441795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 10451795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 10461795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 10471795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 10481795a4d1SJed Brown 1049e28ce29aSPatrick Sanan Output Parameters: 10501795a4d1SJed Brown + r1 - memory allocated in first chunk 10511795a4d1SJed Brown . r2 - memory allocated in second chunk 10521795a4d1SJed Brown . r3 - memory allocated in third chunk 10531795a4d1SJed Brown . r4 - memory allocated in fourth chunk 10541795a4d1SJed Brown . r5 - memory allocated in fifth chunk 10551795a4d1SJed Brown . r6 - memory allocated in sixth chunk 10561795a4d1SJed Brown - r7 - memory allocated in seventh chunk 10571795a4d1SJed Brown 10581795a4d1SJed Brown Level: developer 10591795a4d1SJed Brown 10601795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 10611795a4d1SJed Brown 10621795a4d1SJed Brown M*/ 10632553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 10641795a4d1SJed Brown 10651795a4d1SJed Brown /*MC 1066503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 1067d382aafbSBarry Smith 1068eca87e8dSBarry Smith Synopsis: 1069aaa7dc30SBarry Smith #include <petscsys.h> 1070b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1071eca87e8dSBarry Smith 1072eca87e8dSBarry Smith Not Collective 1073eca87e8dSBarry Smith 1074d382aafbSBarry Smith Output Parameter: 1075b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1076d382aafbSBarry Smith 1077d382aafbSBarry Smith Level: beginner 1078d382aafbSBarry Smith 1079390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1080d382aafbSBarry Smith 1081d382aafbSBarry Smith M*/ 1082b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1083ad0619ddSBarry Smith 1084ad0619ddSBarry Smith /*MC 1085b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1086ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1087ad0619ddSBarry Smith 1088ad0619ddSBarry Smith Synopsis: 1089aaa7dc30SBarry Smith #include <petscsys.h> 1090b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1091ad0619ddSBarry Smith 1092ad0619ddSBarry Smith Not Collective 1093ad0619ddSBarry Smith 1094ad0619ddSBarry Smith Input Parameter: 1095b00a9115SJed Brown . obj - object memory is logged to 1096ad0619ddSBarry Smith 1097ad0619ddSBarry Smith Output Parameter: 1098b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1099ad0619ddSBarry Smith 1100ad0619ddSBarry Smith Level: developer 1101ad0619ddSBarry Smith 1102390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1103ad0619ddSBarry Smith 1104ad0619ddSBarry Smith M*/ 1105d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1106d382aafbSBarry Smith 1107d382aafbSBarry Smith /*MC 1108d382aafbSBarry Smith PetscFree - Frees memory 1109d382aafbSBarry Smith 1110eca87e8dSBarry Smith Synopsis: 1111aaa7dc30SBarry Smith #include <petscsys.h> 1112eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1113eca87e8dSBarry Smith 1114eca87e8dSBarry Smith Not Collective 1115eca87e8dSBarry Smith 1116d382aafbSBarry Smith Input Parameter: 11177f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1118d382aafbSBarry Smith 1119d382aafbSBarry Smith Level: beginner 1120d382aafbSBarry Smith 112149d7da52SJed Brown Notes: 1122390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1123390e1bf2SBarry Smith 112449d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1125d382aafbSBarry Smith 1126390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith M*/ 1129ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1130d382aafbSBarry Smith 1131d382aafbSBarry Smith /*MC 1132d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1133d382aafbSBarry Smith 1134eca87e8dSBarry Smith Synopsis: 1135aaa7dc30SBarry Smith #include <petscsys.h> 1136eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1137eca87e8dSBarry Smith 1138eca87e8dSBarry Smith Not Collective 1139eca87e8dSBarry Smith 1140e28ce29aSPatrick Sanan Input Parameters: 1141d382aafbSBarry Smith + memory1 - memory to free 1142d382aafbSBarry Smith - memory2 - 2nd memory to free 1143d382aafbSBarry Smith 1144d382aafbSBarry Smith Level: developer 1145d382aafbSBarry Smith 114695452b02SPatrick Sanan Notes: 114795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1150d382aafbSBarry Smith 1151d382aafbSBarry Smith M*/ 1152ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1153d382aafbSBarry Smith 1154d382aafbSBarry Smith /*MC 1155d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1156d382aafbSBarry Smith 1157eca87e8dSBarry Smith Synopsis: 1158aaa7dc30SBarry Smith #include <petscsys.h> 1159eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1160eca87e8dSBarry Smith 1161eca87e8dSBarry Smith Not Collective 1162eca87e8dSBarry Smith 1163e28ce29aSPatrick Sanan Input Parameters: 1164d382aafbSBarry Smith + memory1 - memory to free 1165d382aafbSBarry Smith . memory2 - 2nd memory to free 1166d382aafbSBarry Smith - memory3 - 3rd memory to free 1167d382aafbSBarry Smith 1168d382aafbSBarry Smith Level: developer 1169d382aafbSBarry Smith 117095452b02SPatrick Sanan Notes: 117195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1172d382aafbSBarry Smith 1173d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1174d382aafbSBarry Smith 1175d382aafbSBarry Smith M*/ 1176ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1177d382aafbSBarry Smith 1178d382aafbSBarry Smith /*MC 1179d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1180d382aafbSBarry Smith 1181eca87e8dSBarry Smith Synopsis: 1182aaa7dc30SBarry Smith #include <petscsys.h> 1183eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1184eca87e8dSBarry Smith 1185eca87e8dSBarry Smith Not Collective 1186eca87e8dSBarry Smith 1187e28ce29aSPatrick Sanan Input Parameters: 1188d382aafbSBarry Smith + m1 - memory to free 1189d382aafbSBarry Smith . m2 - 2nd memory to free 1190d382aafbSBarry Smith . m3 - 3rd memory to free 1191d382aafbSBarry Smith - m4 - 4th memory to free 1192d382aafbSBarry Smith 1193d382aafbSBarry Smith Level: developer 1194d382aafbSBarry Smith 119595452b02SPatrick Sanan Notes: 119695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1197d382aafbSBarry Smith 1198d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1199d382aafbSBarry Smith 1200d382aafbSBarry Smith M*/ 1201ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1202d382aafbSBarry Smith 1203d382aafbSBarry Smith /*MC 1204d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1205d382aafbSBarry Smith 1206eca87e8dSBarry Smith Synopsis: 1207aaa7dc30SBarry Smith #include <petscsys.h> 1208eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1209eca87e8dSBarry Smith 1210eca87e8dSBarry Smith Not Collective 1211eca87e8dSBarry Smith 1212e28ce29aSPatrick Sanan Input Parameters: 1213d382aafbSBarry Smith + m1 - memory to free 1214d382aafbSBarry Smith . m2 - 2nd memory to free 1215d382aafbSBarry Smith . m3 - 3rd memory to free 1216d382aafbSBarry Smith . m4 - 4th memory to free 1217d382aafbSBarry Smith - m5 - 5th memory to free 1218d382aafbSBarry Smith 1219d382aafbSBarry Smith Level: developer 1220d382aafbSBarry Smith 122195452b02SPatrick Sanan Notes: 122295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1223d382aafbSBarry Smith 1224d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith M*/ 1227ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1228d382aafbSBarry Smith 1229d382aafbSBarry Smith /*MC 1230d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1231d382aafbSBarry Smith 1232eca87e8dSBarry Smith Synopsis: 1233aaa7dc30SBarry Smith #include <petscsys.h> 1234eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1235eca87e8dSBarry Smith 1236eca87e8dSBarry Smith Not Collective 1237eca87e8dSBarry Smith 1238e28ce29aSPatrick Sanan Input Parameters: 1239d382aafbSBarry Smith + m1 - memory to free 1240d382aafbSBarry Smith . m2 - 2nd memory to free 1241d382aafbSBarry Smith . m3 - 3rd memory to free 1242d382aafbSBarry Smith . m4 - 4th memory to free 1243d382aafbSBarry Smith . m5 - 5th memory to free 1244d382aafbSBarry Smith - m6 - 6th memory to free 1245d382aafbSBarry Smith 1246d382aafbSBarry Smith 1247d382aafbSBarry Smith Level: developer 1248d382aafbSBarry Smith 124995452b02SPatrick Sanan Notes: 125095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1251d382aafbSBarry Smith 1252d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1253d382aafbSBarry Smith 1254d382aafbSBarry Smith M*/ 1255ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1256d382aafbSBarry Smith 1257d382aafbSBarry Smith /*MC 1258d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1259d382aafbSBarry Smith 1260eca87e8dSBarry Smith Synopsis: 1261aaa7dc30SBarry Smith #include <petscsys.h> 1262eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1263eca87e8dSBarry Smith 1264eca87e8dSBarry Smith Not Collective 1265eca87e8dSBarry Smith 1266e28ce29aSPatrick Sanan Input Parameters: 1267d382aafbSBarry Smith + m1 - memory to free 1268d382aafbSBarry Smith . m2 - 2nd memory to free 1269d382aafbSBarry Smith . m3 - 3rd memory to free 1270d382aafbSBarry Smith . m4 - 4th memory to free 1271d382aafbSBarry Smith . m5 - 5th memory to free 1272d382aafbSBarry Smith . m6 - 6th memory to free 1273d382aafbSBarry Smith - m7 - 7th memory to free 1274d382aafbSBarry Smith 1275d382aafbSBarry Smith 1276d382aafbSBarry Smith Level: developer 1277d382aafbSBarry Smith 127895452b02SPatrick Sanan Notes: 127995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1280d382aafbSBarry Smith 1281d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1282d382aafbSBarry Smith PetscMalloc7() 1283d382aafbSBarry Smith 1284d382aafbSBarry Smith M*/ 1285ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1286d382aafbSBarry Smith 1287ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1288ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1289071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1290efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12913221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1292ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 129392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1295d382aafbSBarry Smith 1296d382aafbSBarry Smith /* 1297c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1298c1706be6SHong Zhang */ 1299c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1300c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 130131f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 130231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 130331f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 130431f06eaaSHong Zhang #endif 130559af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 130659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 130759af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 130859af0bd3SScott Kruger #endif 130959af0bd3SScott Kruger 1310c1706be6SHong Zhang 1311a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 131236763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1313a5057860SBarry Smith 1314a5057860SBarry Smith /* 131566d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1316d382aafbSBarry Smith */ 1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 131892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1321e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1322e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 132392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 132492f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1325efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 132692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 132792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1328608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1329608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool*); 1330d382aafbSBarry Smith 13316a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1333014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 13358e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1336d382aafbSBarry Smith 1337d382aafbSBarry Smith /* 1338d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1339d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1340d382aafbSBarry Smith functionality and/or error checking. 1341d382aafbSBarry Smith */ 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1344d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1352a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 13562f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 13612c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 136447340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 13656fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 13666991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 13676991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1369d382aafbSBarry Smith 1370573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1371573b0fb4SBarry Smith 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1375d382aafbSBarry Smith 1376e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1377a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1378a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1379a53986e1SJed Brown 1380d382aafbSBarry Smith /* 1381d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1382d382aafbSBarry Smith */ 1383367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1384570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1385de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1386014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1387014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1388d9822059SBarry Smith #else 1389de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1390d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1391d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1392d9822059SBarry Smith #endif 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1394d382aafbSBarry Smith 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1397eb3f98d2SBarry Smith 139895c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1399d6a4318aSJed Brown 1400639ff905SBarry Smith /* 1401639ff905SBarry Smith Defines PETSc error handling. 1402639ff905SBarry Smith */ 1403639ff905SBarry Smith #include <petscerror.h> 1404d382aafbSBarry Smith 14050700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1406014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1407014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1408014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 140981256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 141081256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 141181256985SMatthew G. Knepley 1412d382aafbSBarry Smith 1413d382aafbSBarry Smith /* 1414d382aafbSBarry Smith Routines that get memory usage information from the OS 1415d382aafbSBarry Smith */ 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1419b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1420d382aafbSBarry Smith 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1422d382aafbSBarry Smith 1423d382aafbSBarry Smith /* 1424d382aafbSBarry Smith Initialization of PETSc 1425d382aafbSBarry Smith */ 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1436d382aafbSBarry Smith 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1438607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1439d382aafbSBarry Smith 1440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1444d382aafbSBarry Smith 1445a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1446a50e088cSMatthew G. Knepley 1447a50e088cSMatthew G. Knepley 1448d382aafbSBarry Smith /* 1449d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 14502981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1451d382aafbSBarry Smith */ 1452638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1453638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1454638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1455d382aafbSBarry Smith 1456d382aafbSBarry Smith /* 1457d382aafbSBarry Smith Functions that can act on any PETSc object. 1458d382aafbSBarry Smith */ 1459014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1460014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1461014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1477bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1478bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14810eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14820eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1484d382aafbSBarry Smith 1485665c2dedSJed Brown #include <petscviewertypes.h> 1486639ff905SBarry Smith #include <petscoptions.h> 1487639ff905SBarry Smith 1488608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer,PetscBool,PetscLogDouble); 1489608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool*); 1490608c71bfSMatthew G. Knepley 14910633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14920633abcbSJed Brown 1493c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1494dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1495639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14960005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14970005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1505685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 15084099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1510b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1513d382aafbSBarry Smith 1514e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 15157aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1516e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1517e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1518e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1519e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1520e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1521e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1522e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1523e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1524e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 152515681b3cSBarry Smith 1526ec7429eaSBarry Smith #else 15277aab2a10SBarry Smith #define PetscSAWsBlock() 0 1528e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1529e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1530e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1531e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1532e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1533e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1534e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1535e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1536e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 153715681b3cSBarry Smith 1538ec7429eaSBarry Smith #endif 1539b90c6cbeSBarry Smith 154082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 154182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 154282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1543184ce1a2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), const char **); 15447d5d4d99SBarry Smith 15455fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1546a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 15475fe58b6fSBarry Smith #endif 15487eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1549a64a8e02SBarry Smith 1550140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1551140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1552140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1553140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1554140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1555140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1556d382aafbSBarry Smith 1557d382aafbSBarry Smith /* 1558503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1559d382aafbSBarry Smith link libraries that will be loaded as needed. 1560d382aafbSBarry Smith */ 1561a240a19fSJed Brown 1562a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1563a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1564140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 15651c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 15661c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 156744ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1568140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1569140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1570140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1571d382aafbSBarry Smith 1572014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1577014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1578014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1580d382aafbSBarry Smith 1581d382aafbSBarry Smith /* 1582d382aafbSBarry Smith Useful utility routines 1583d382aafbSBarry Smith */ 1584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1586d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1591dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[2],PetscInt[2]); 1592dd438433SSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[2],PetscReal[2]); 1593d382aafbSBarry Smith 159464ac3b0dSPatrick Sanan /*MC 1595ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1596503cfb0cSBarry Smith 1597e28ce29aSPatrick Sanan Notes: 1598e28ce29aSPatrick Sanan This is useful in cases like 1599503cfb0cSBarry Smith $ int *a; 1600ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 16011cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 160264ac3b0dSPatrick Sanan 160364ac3b0dSPatrick Sanan Level: beginner 160464ac3b0dSPatrick Sanan 160564ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 160664ac3b0dSPatrick Sanan M*/ 1607d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1608503cfb0cSBarry Smith 1609d382aafbSBarry Smith /*MC 1610d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1611d382aafbSBarry Smith 1612d382aafbSBarry Smith Synopsis: 1613aaa7dc30SBarry Smith #include <petscsys.h> 1614659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1615d382aafbSBarry Smith 1616659f7ba0SBarry Smith Collective on comm 1617eca87e8dSBarry Smith 1618d382aafbSBarry Smith Input Parameters: 1619659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1620d382aafbSBarry Smith . format - the usual printf() format string 1621659f7ba0SBarry Smith - args - arguments to be printed 1622d382aafbSBarry Smith 1623d382aafbSBarry Smith Level: developer 1624d382aafbSBarry Smith 1625d382aafbSBarry Smith Fortran Note: 1626d382aafbSBarry Smith This routine is not supported in Fortran. 1627d382aafbSBarry Smith 1628659f7ba0SBarry Smith Note: 1629659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1630659f7ba0SBarry Smith 1631659f7ba0SBarry Smith To use, write your own function, for example, 1632659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1633659f7ba0SBarry Smith ${ 1634659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1635659f7ba0SBarry Smith $} 1636659f7ba0SBarry Smith then do the assigment 1637659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 1638659f7ba0SBarry Smith You can do the assignment before PetscInitialize(). 1639659f7ba0SBarry Smith 1640659f7ba0SBarry Smith The default routine used is called PetscHelpPrintfDefault(). 1641d382aafbSBarry Smith 1642d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1643d382aafbSBarry Smith M*/ 1644014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1645d382aafbSBarry Smith 1646fcfd50ebSBarry Smith /* 1647fcfd50ebSBarry Smith Defines PETSc profiling. 1648fcfd50ebSBarry Smith */ 16492c8e378dSBarry Smith #include <petsclog.h> 1650fcfd50ebSBarry Smith 1651fcfd50ebSBarry Smith /* 1652fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1653fcfd50ebSBarry Smith */ 1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1656014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1658014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1659014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1660014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 16611b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1662fcfd50ebSBarry Smith 1663014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1664014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1665014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1666d382aafbSBarry Smith 1667d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1668d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1669d781fa04SBarry Smith 1670d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1671014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1672016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 167374ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1674d382aafbSBarry Smith #endif 1675d382aafbSBarry Smith 1676014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1677014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 16780ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1682014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1683d382aafbSBarry Smith 1684014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1685014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1686014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1687014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1688014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1689014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1690b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1691d382aafbSBarry Smith 1692d382aafbSBarry Smith /* 1693d382aafbSBarry Smith For use in debuggers 1694d382aafbSBarry Smith */ 1695014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1696014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1697014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1698014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1699014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1700d382aafbSBarry Smith 1701a663daf8SBarry Smith #include <stddef.h> 1702a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1703d382aafbSBarry Smith #include <stdlib.h> 17046c7e564aSBarry Smith 17054a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1706d382aafbSBarry Smith #include <xmmintrin.h> 1707d382aafbSBarry Smith #endif 1708d382aafbSBarry Smith 1709d382aafbSBarry Smith /*@C 1710580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1711580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1712580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1713580bdb30SBarry Smith 1714580bdb30SBarry Smith Not Collective 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith Input Parameters: 1717580bdb30SBarry Smith + b - pointer to initial memory space 1718580bdb30SBarry Smith . a - pointer to copy space 1719580bdb30SBarry Smith - n - length (in bytes) of space to copy 1720580bdb30SBarry Smith 1721580bdb30SBarry Smith Level: intermediate 1722580bdb30SBarry Smith 1723580bdb30SBarry Smith Note: 1724857a15f1SBarry Smith PetscArraymove() is preferred 1725580bdb30SBarry Smith This routine is analogous to memmove(). 1726580bdb30SBarry Smith 1727580bdb30SBarry Smith Developers Note: This is inlined for performance 1728580bdb30SBarry Smith 1729580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1730580bdb30SBarry Smith PetscArraymove() 1731580bdb30SBarry Smith @*/ 1732580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1733580bdb30SBarry Smith { 1734580bdb30SBarry Smith PetscFunctionBegin; 1735580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1736580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1737580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1738580bdb30SBarry Smith if (a < b) { 1739580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1740580bdb30SBarry Smith else { 1741580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1742580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1743580bdb30SBarry Smith } 1744580bdb30SBarry Smith } else { 1745580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1746580bdb30SBarry Smith else { 1747580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1748580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1749580bdb30SBarry Smith } 1750580bdb30SBarry Smith } 1751580bdb30SBarry Smith #else 1752580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1753580bdb30SBarry Smith #endif 1754580bdb30SBarry Smith PetscFunctionReturn(0); 1755580bdb30SBarry Smith } 1756580bdb30SBarry Smith 1757d382aafbSBarry Smith /*@C 1758d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1759d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1760d382aafbSBarry Smith PetscMemmove() in that case. 1761d382aafbSBarry Smith 1762d382aafbSBarry Smith Not Collective 1763d382aafbSBarry Smith 1764d382aafbSBarry Smith Input Parameters: 1765d382aafbSBarry Smith + b - pointer to initial memory space 1766d382aafbSBarry Smith - n - length (in bytes) of space to copy 1767d382aafbSBarry Smith 1768d382aafbSBarry Smith Output Parameter: 1769d382aafbSBarry Smith . a - pointer to copy space 1770d382aafbSBarry Smith 1771d382aafbSBarry Smith Level: intermediate 1772d382aafbSBarry Smith 1773d382aafbSBarry Smith Compile Option: 1774d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1775d382aafbSBarry Smith for memory copies on double precision values. 1776d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1777d382aafbSBarry Smith for memory copies on double precision values. 1778d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1779d382aafbSBarry Smith for memory copies on double precision values. 1780d382aafbSBarry Smith 1781d382aafbSBarry Smith Note: 1782580bdb30SBarry Smith Prefer PetscArraycpy() 1783d382aafbSBarry Smith This routine is analogous to memcpy(). 17841fd49c25SBarry Smith Not available from Fortran 17851fd49c25SBarry Smith 1786f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1787f5f57ec0SBarry Smith 1788580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1789d382aafbSBarry Smith 1790d382aafbSBarry Smith @*/ 17917087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1792d382aafbSBarry Smith { 1793d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1794c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1795c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1796a7e36092SMatthew G Knepley PetscFunctionBegin; 1797e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1798e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1799a7e36092SMatthew G Knepley #else 1800d382aafbSBarry Smith PetscFunctionBegin; 1801a7e36092SMatthew G Knepley #endif 1802a47a537aSLisandro Dalcin if (a != b && n > 0) { 1803d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1804e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1805d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1806d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1807d382aafbSBarry Smith #endif 1808d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1809c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1810d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1811d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1812c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1813c5df96a5SBarry Smith PetscErrorCode ierr; 1814c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 18158b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1816d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1817d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1818d382aafbSBarry Smith #else 1819d382aafbSBarry Smith size_t i; 1820d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1821d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1822d382aafbSBarry Smith #endif 1823d382aafbSBarry Smith } else { 1824d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1825d382aafbSBarry Smith } 1826d382aafbSBarry Smith #else 1827d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1828d382aafbSBarry Smith #endif 1829d382aafbSBarry Smith } 1830d382aafbSBarry Smith PetscFunctionReturn(0); 1831d382aafbSBarry Smith } 1832d382aafbSBarry Smith 1833d382aafbSBarry Smith /*@C 1834d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith Not Collective 1837d382aafbSBarry Smith 1838d382aafbSBarry Smith Input Parameters: 1839d382aafbSBarry Smith + a - pointer to beginning memory location 1840d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1841d382aafbSBarry Smith 1842d382aafbSBarry Smith Level: intermediate 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith Compile Option: 1845d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1846d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1847d382aafbSBarry Smith 18481fd49c25SBarry Smith Not available from Fortran 1849857a15f1SBarry Smith Prefer PetscArrayzero() 18501fd49c25SBarry Smith 1851503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1852503cfb0cSBarry Smith 1853580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1854d382aafbSBarry Smith @*/ 18557087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1856d382aafbSBarry Smith { 1857d382aafbSBarry Smith if (n > 0) { 1858d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 185918703db9SJunchao Zhang if (!a) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer with %zu bytes",n); 1860d382aafbSBarry Smith #endif 1861d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1862d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1863d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1864d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1865d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1866d382aafbSBarry Smith } else { 1867d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1868d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1869d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1870d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1871d382aafbSBarry Smith } else { 1872d382aafbSBarry Smith #endif 1873d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1874d382aafbSBarry Smith bzero((char *)a,n); 1875d382aafbSBarry Smith #else 1876d382aafbSBarry Smith memset((char*)a,0,n); 1877d382aafbSBarry Smith #endif 1878d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1879d382aafbSBarry Smith } 1880d382aafbSBarry Smith #endif 1881d382aafbSBarry Smith } 1882d382aafbSBarry Smith return 0; 1883d382aafbSBarry Smith } 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith /*MC 1886580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1887580bdb30SBarry Smith 1888580bdb30SBarry Smith Synopsis: 1889580bdb30SBarry Smith #include <petscsys.h> 1890580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1891580bdb30SBarry Smith 1892580bdb30SBarry Smith Not Collective 1893580bdb30SBarry Smith 1894580bdb30SBarry Smith Input Parameters: 1895580bdb30SBarry Smith + str1 - First array 1896580bdb30SBarry Smith . str2 - Second array 1897580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1898580bdb30SBarry Smith 1899580bdb30SBarry Smith Output Parameters: 1900580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1901580bdb30SBarry Smith 1902580bdb30SBarry Smith Level: intermediate 1903580bdb30SBarry Smith 1904580bdb30SBarry Smith Note: 1905857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1906580bdb30SBarry Smith The arrays must be of the same type 1907580bdb30SBarry Smith 1908580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1909580bdb30SBarry Smith PetscArraymove() 1910580bdb30SBarry Smith M*/ 19119e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1912580bdb30SBarry Smith 19138f8f2f0dSBarry Smith /*MC 1914580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1915580bdb30SBarry Smith do not overlap 1916580bdb30SBarry Smith 1917580bdb30SBarry Smith Synopsis: 1918580bdb30SBarry Smith #include <petscsys.h> 1919580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1920580bdb30SBarry Smith 1921580bdb30SBarry Smith Not Collective 1922580bdb30SBarry Smith 1923580bdb30SBarry Smith Input Parameters: 1924580bdb30SBarry Smith + str1 - First array 1925580bdb30SBarry Smith . str2 - Second array 1926580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1927580bdb30SBarry Smith 1928580bdb30SBarry Smith Level: intermediate 1929580bdb30SBarry Smith 1930580bdb30SBarry Smith Note: 1931857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1932580bdb30SBarry Smith The arrays must be of the same type 1933580bdb30SBarry Smith 1934580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1935580bdb30SBarry Smith M*/ 19369e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1937580bdb30SBarry Smith 19388f8f2f0dSBarry Smith /*MC 1939580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1940580bdb30SBarry Smith 1941580bdb30SBarry Smith Synopsis: 1942580bdb30SBarry Smith #include <petscsys.h> 1943580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1944580bdb30SBarry Smith 1945580bdb30SBarry Smith Not Collective 1946580bdb30SBarry Smith 1947580bdb30SBarry Smith Input Parameters: 1948de25709eSStefano Zampini + str1 - First array (destination) 1949de25709eSStefano Zampini . str2 - Second array (source) 1950580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1951580bdb30SBarry Smith 1952580bdb30SBarry Smith Level: intermediate 1953580bdb30SBarry Smith 1954580bdb30SBarry Smith Note: 1955857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1956580bdb30SBarry Smith The arrays must be of the same type 1957580bdb30SBarry Smith 1958580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1959580bdb30SBarry Smith M*/ 19609e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1961580bdb30SBarry Smith 19628f8f2f0dSBarry Smith /*MC 1963580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1964580bdb30SBarry Smith 1965580bdb30SBarry Smith Synopsis: 1966580bdb30SBarry Smith #include <petscsys.h> 1967580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1968580bdb30SBarry Smith 1969580bdb30SBarry Smith Not Collective 1970580bdb30SBarry Smith 1971580bdb30SBarry Smith Input Parameters: 1972580bdb30SBarry Smith + str1 - array 1973580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1974580bdb30SBarry Smith 1975580bdb30SBarry Smith Level: intermediate 1976580bdb30SBarry Smith 1977580bdb30SBarry Smith Note: 1978857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1979580bdb30SBarry Smith 1980580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1981580bdb30SBarry Smith M*/ 19829e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1983580bdb30SBarry Smith 1984d382aafbSBarry Smith /*MC 1985d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1986d382aafbSBarry Smith 1987eca87e8dSBarry Smith Synopsis: 1988aaa7dc30SBarry Smith #include <petscsys.h> 1989eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1990eca87e8dSBarry Smith 1991d382aafbSBarry Smith Not Collective 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith Input Parameters: 1994d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1995d382aafbSBarry Smith . n - number of elements to fetch 1996d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 199750d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1998d382aafbSBarry Smith 1999d382aafbSBarry Smith Level: developer 2000d382aafbSBarry Smith 2001d382aafbSBarry Smith Notes: 2002d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 2003d382aafbSBarry Smith 200450d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 200550d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 200650d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 200763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 200863cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 200963cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 2012d382aafbSBarry Smith address). 2013d382aafbSBarry Smith 2014d382aafbSBarry Smith M*/ 2015d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 2016d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 2017d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 2018d382aafbSBarry Smith } while (0) 2019d382aafbSBarry Smith 2020d382aafbSBarry Smith /* 2021d382aafbSBarry Smith Determine if some of the kernel computation routines use 2022d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 2023d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 2024d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 2025e2e64c6bSBarry Smith should be used with ./configure to turn these on. 2026d382aafbSBarry Smith */ 2027d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 2028d382aafbSBarry Smith 2029d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 2030d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 2031d382aafbSBarry Smith #endif 2032d382aafbSBarry Smith 20335a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 20345a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 2035d382aafbSBarry Smith #endif 2036d382aafbSBarry Smith 2037d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 2038d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 2039d382aafbSBarry Smith #endif 2040d382aafbSBarry Smith 2041d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 2042d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 2043d382aafbSBarry Smith #endif 2044d382aafbSBarry Smith 2045d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 2046d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 2047d382aafbSBarry Smith #endif 2048d382aafbSBarry Smith 2049d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 2050d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 2051d382aafbSBarry Smith #endif 2052d382aafbSBarry Smith 2053d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 2054d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 2055d382aafbSBarry Smith #endif 2056d382aafbSBarry Smith 2057d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 2058d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 2059d382aafbSBarry Smith #endif 2060d382aafbSBarry Smith 2061d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 2062d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 2063d382aafbSBarry Smith #endif 2064d382aafbSBarry Smith 2065d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 2066d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 2067d382aafbSBarry Smith #endif 2068d382aafbSBarry Smith 2069d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 2070d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 2071d382aafbSBarry Smith #endif 2072d382aafbSBarry Smith 2073d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 2074d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 2075d382aafbSBarry Smith #endif 2076d382aafbSBarry Smith 2077d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 2078d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 2079d382aafbSBarry Smith #endif 2080d382aafbSBarry Smith 2081d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 2082d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 2083d382aafbSBarry Smith #endif 2084d382aafbSBarry Smith 2085d382aafbSBarry Smith #endif 2086d382aafbSBarry Smith 2087d382aafbSBarry Smith /* 2088d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 2089d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 2090d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2091d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2092d382aafbSBarry Smith ugly extern "C" {} wrappers. 2093d382aafbSBarry Smith */ 2094d382aafbSBarry Smith #if defined(__cplusplus) 2095d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2096d382aafbSBarry Smith # define EXTERN_C_END } 2097d382aafbSBarry Smith #else 2098d382aafbSBarry Smith # define EXTERN_C_BEGIN 2099d382aafbSBarry Smith # define EXTERN_C_END 2100d382aafbSBarry Smith #endif 2101d382aafbSBarry Smith 2102d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2103d382aafbSBarry Smith 2104d382aafbSBarry Smith /*MC 2105d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2106d382aafbSBarry Smith communication 2107d382aafbSBarry Smith 2108d382aafbSBarry Smith Level: beginner 2109d382aafbSBarry Smith 2110d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2111d382aafbSBarry Smith 2112d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2113d382aafbSBarry Smith M*/ 2114d382aafbSBarry Smith 2115d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2116014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2117014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2118c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2119c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2120c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2121c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2122d382aafbSBarry Smith #endif 2123d382aafbSBarry Smith 2124d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2125d382aafbSBarry Smith 2126d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2127d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2128d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2129d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2130d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2131d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2132*eee0c0a6SToby Isaac #define PETSC_CUBLAS_INT_MAX 2147483647 2133d382aafbSBarry Smith 213461b0d812SBarry Smith /*@C 2135c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2136c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2137c73702f5SBarry Smith 2138c73702f5SBarry Smith Not Collective 2139c73702f5SBarry Smith 2140c73702f5SBarry Smith Input Parameter: 2141c73702f5SBarry Smith . a - the PetscInt64 value 2142c73702f5SBarry Smith 2143c73702f5SBarry Smith Output Parameter: 2144c73702f5SBarry Smith . b - the resulting PetscInt value 2145c73702f5SBarry Smith 2146c73702f5SBarry Smith Level: advanced 2147c73702f5SBarry Smith 2148c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2149c73702f5SBarry Smith 2150c73702f5SBarry Smith Not available from Fortran 2151c73702f5SBarry Smith 215261778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast(), PetscIntMultError(), PetscIntSumError() 2153c73702f5SBarry Smith @*/ 2154c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2155c73702f5SBarry Smith { 2156c73702f5SBarry Smith PetscFunctionBegin; 2157c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2158c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2159c73702f5SBarry Smith #endif 2160c73702f5SBarry Smith *b = (PetscInt)(a); 2161c73702f5SBarry Smith PetscFunctionReturn(0); 2162c73702f5SBarry Smith } 2163c73702f5SBarry Smith 2164c73702f5SBarry Smith /*@C 216561b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 216661b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 216761b0d812SBarry Smith 216861b0d812SBarry Smith Not Collective 216961b0d812SBarry Smith 217061b0d812SBarry Smith Input Parameter: 217161b0d812SBarry Smith . a - the PetscInt value 217261b0d812SBarry Smith 217361b0d812SBarry Smith Output Parameter: 217461b0d812SBarry Smith . b - the resulting PetscBLASInt value 217561b0d812SBarry Smith 217661b0d812SBarry Smith Level: advanced 217761b0d812SBarry Smith 21780bc7d38cSBarry Smith Notes: 21791fd49c25SBarry Smith Not available from Fortran 2180f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 21811fd49c25SBarry Smith 2182c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 218361b0d812SBarry Smith @*/ 2184c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2185c5df96a5SBarry Smith { 2186c5df96a5SBarry Smith PetscFunctionBegin; 2187c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 218873f49a0bSSatish Balay *b = 0; 218961778c46SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with -with-64-bit-blas-indices for the case you are running"); 2190c5df96a5SBarry Smith #endif 21910bc7d38cSBarry Smith if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to BLAS/LAPACK routine"); 2192c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2193c5df96a5SBarry Smith PetscFunctionReturn(0); 2194c5df96a5SBarry Smith } 2195c5df96a5SBarry Smith 219661b0d812SBarry Smith /*@C 2197*eee0c0a6SToby Isaac PetscCuBLASIntCast - like PetscBLASIntCast(), but for PetscCuBLASInt. 2198*eee0c0a6SToby Isaac 2199*eee0c0a6SToby Isaac Not Collective 2200*eee0c0a6SToby Isaac 2201*eee0c0a6SToby Isaac Input Parameter: 2202*eee0c0a6SToby Isaac . a - the PetscInt value 2203*eee0c0a6SToby Isaac 2204*eee0c0a6SToby Isaac Output Parameter: 2205*eee0c0a6SToby Isaac . b - the resulting PetscCuBLASInt value 2206*eee0c0a6SToby Isaac 2207*eee0c0a6SToby Isaac Level: advanced 2208*eee0c0a6SToby Isaac 2209*eee0c0a6SToby Isaac Notes: 2210*eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2211*eee0c0a6SToby Isaac 2212*eee0c0a6SToby Isaac .seealso: PetscCuBLASInt, PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscMPIIntCast(), PetscIntCast() 2213*eee0c0a6SToby Isaac @*/ 2214*eee0c0a6SToby Isaac PETSC_STATIC_INLINE PetscErrorCode PetscCuBLASIntCast(PetscInt a,PetscBLASInt *b) 2215*eee0c0a6SToby Isaac { 2216*eee0c0a6SToby Isaac PetscFunctionBegin; 2217*eee0c0a6SToby Isaac #if defined(PETSC_USE_64BIT_INDICES) 2218*eee0c0a6SToby Isaac *b = 0; 2219*eee0c0a6SToby Isaac if ((a) > PETSC_CUBLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array is too long for cuBLAS, which is restricted to 32 bit integers."); 2220*eee0c0a6SToby Isaac #endif 2221*eee0c0a6SToby Isaac if (a < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Passing negative integer to cuBLAS routine"); 2222*eee0c0a6SToby Isaac *b = (PetscCuBLASInt)(a); 2223*eee0c0a6SToby Isaac PetscFunctionReturn(0); 2224*eee0c0a6SToby Isaac } 2225*eee0c0a6SToby Isaac 2226*eee0c0a6SToby Isaac /*@C 222761b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 222861b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 222961b0d812SBarry Smith 223061b0d812SBarry Smith Not Collective 223161b0d812SBarry Smith 223261b0d812SBarry Smith Input Parameter: 223361b0d812SBarry Smith . a - the PetscInt value 223461b0d812SBarry Smith 223561b0d812SBarry Smith Output Parameter: 223661b0d812SBarry Smith . b - the resulting PetscMPIInt value 223761b0d812SBarry Smith 223861b0d812SBarry Smith Level: advanced 223961b0d812SBarry Smith 22401fd49c25SBarry Smith Not available from Fortran 22411fd49c25SBarry Smith 2242c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 224361b0d812SBarry Smith @*/ 22444dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 22454dc2109aSBarry Smith { 22464dc2109aSBarry Smith PetscFunctionBegin; 22474dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 224873f49a0bSSatish Balay *b = 0; 224961778c46SBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI, which is restricted to 32 bit integers"); 22504dc2109aSBarry Smith #endif 2251c73702f5SBarry Smith *b = (PetscMPIInt)(a); 22524dc2109aSBarry Smith PetscFunctionReturn(0); 22534dc2109aSBarry Smith } 22544dc2109aSBarry Smith 2255bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 22562f18eb33SBarry Smith 22572f18eb33SBarry Smith /*@C 22582f18eb33SBarry Smith 22592f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 22602f18eb33SBarry Smith 22612f18eb33SBarry Smith Not Collective 22622f18eb33SBarry Smith 22632f18eb33SBarry Smith Input Parameter: 22642f18eb33SBarry Smith + a - the PetscReal value 22652f18eb33SBarry Smith - b - the second value 22662f18eb33SBarry Smith 2267390e1bf2SBarry Smith Returns: 2268390e1bf2SBarry Smith the result as a PetscInt value 22692f18eb33SBarry Smith 2270bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 22712f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 22722f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 22732f18eb33SBarry Smith 2274e28ce29aSPatrick Sanan Developers Note: 2275e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 22762f18eb33SBarry Smith 22772f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 22782f18eb33SBarry Smith 22791fd49c25SBarry Smith Not available from Fortran 22801fd49c25SBarry Smith 22812f18eb33SBarry Smith Level: advanced 22822f18eb33SBarry Smith 228361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 22842f18eb33SBarry Smith @*/ 22852f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 22862f18eb33SBarry Smith { 2287bafee8b4SSatish Balay PetscInt64 r; 22882f18eb33SBarry Smith 2289bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 22902f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22912f18eb33SBarry Smith return (PetscInt) r; 22922f18eb33SBarry Smith } 22932f18eb33SBarry Smith 22942f18eb33SBarry Smith /*@C 22952f18eb33SBarry Smith 22962f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 22972f18eb33SBarry Smith 22982f18eb33SBarry Smith Not Collective 22992f18eb33SBarry Smith 23002f18eb33SBarry Smith Input Parameter: 23012f18eb33SBarry Smith + a - the PetscInt value 23022f18eb33SBarry Smith - b - the second value 23032f18eb33SBarry Smith 2304390e1bf2SBarry Smith Returns: 2305390e1bf2SBarry Smith the result as a PetscInt value 23062f18eb33SBarry Smith 2307bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 23082f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 23092f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 23102f18eb33SBarry Smith 23111fd49c25SBarry Smith Not available from Fortran 23121fd49c25SBarry Smith 23132f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 23142f18eb33SBarry Smith 23152f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 23162f18eb33SBarry Smith 23172f18eb33SBarry Smith Level: advanced 23182f18eb33SBarry Smith 231961778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError(), PetscIntSumError() 23202f18eb33SBarry Smith @*/ 23212f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 23222f18eb33SBarry Smith { 2323bafee8b4SSatish Balay PetscInt64 r; 23242f18eb33SBarry Smith 2325bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23262f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 23272f18eb33SBarry Smith return (PetscInt) r; 23282f18eb33SBarry Smith } 23292f18eb33SBarry Smith 2330f91af8c7SBarry Smith /*@C 2331f91af8c7SBarry Smith 2332f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2333f91af8c7SBarry Smith 2334f91af8c7SBarry Smith Not Collective 2335f91af8c7SBarry Smith 2336f91af8c7SBarry Smith Input Parameter: 2337f91af8c7SBarry Smith + a - the PetscInt value 2338f91af8c7SBarry Smith - b - the second value 2339f91af8c7SBarry Smith 2340390e1bf2SBarry Smith Returns: 2341390e1bf2SBarry Smith the result as a PetscInt value 2342f91af8c7SBarry Smith 2343bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2344f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2345f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2346f91af8c7SBarry Smith 2347f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2348f91af8c7SBarry Smith 2349f5f57ec0SBarry Smith Not available from Fortran 2350f5f57ec0SBarry Smith 2351f91af8c7SBarry Smith Level: advanced 2352f91af8c7SBarry Smith 235361778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2354f91af8c7SBarry Smith @*/ 2355f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2356f91af8c7SBarry Smith { 2357bafee8b4SSatish Balay PetscInt64 r; 2358f91af8c7SBarry Smith 2359bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2360f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2361f91af8c7SBarry Smith return (PetscInt) r; 2362f91af8c7SBarry Smith } 2363f91af8c7SBarry Smith 23642f18eb33SBarry Smith /*@C 23652f18eb33SBarry Smith 23662f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 23672f18eb33SBarry Smith 23682f18eb33SBarry Smith Not Collective 23692f18eb33SBarry Smith 23702f18eb33SBarry Smith Input Parameter: 23712f18eb33SBarry Smith + a - the PetscInt value 23722f18eb33SBarry Smith - b - the second value 23732f18eb33SBarry Smith 23742f18eb33SBarry Smith Output Parameter:ma 2375390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 23762f18eb33SBarry Smith 2377bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 23782f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 23792f18eb33SBarry Smith 2380f5f57ec0SBarry Smith Not available from Fortran 2381f5f57ec0SBarry Smith 2382220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 23832f18eb33SBarry Smith 23842f18eb33SBarry Smith Level: advanced 23852f18eb33SBarry Smith 2386220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 23872f18eb33SBarry Smith @*/ 23882f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 23892f18eb33SBarry Smith { 2390bafee8b4SSatish Balay PetscInt64 r; 23912f18eb33SBarry Smith 23922f18eb33SBarry Smith PetscFunctionBegin; 2393bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 23942f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 239561778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 23962f18eb33SBarry Smith #endif 2397f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2398f91af8c7SBarry Smith PetscFunctionReturn(0); 2399f91af8c7SBarry Smith } 2400f91af8c7SBarry Smith 2401f91af8c7SBarry Smith /*@C 2402f91af8c7SBarry Smith 2403fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2404f91af8c7SBarry Smith 2405f91af8c7SBarry Smith Not Collective 2406f91af8c7SBarry Smith 2407f91af8c7SBarry Smith Input Parameter: 2408f91af8c7SBarry Smith + a - the PetscInt value 2409f91af8c7SBarry Smith - b - the second value 2410f91af8c7SBarry Smith 2411f91af8c7SBarry Smith Output Parameter:ma 2412390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2413f91af8c7SBarry Smith 2414bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2415f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2416f91af8c7SBarry Smith 2417f5f57ec0SBarry Smith Not available from Fortran 2418f5f57ec0SBarry Smith 2419f91af8c7SBarry Smith Level: advanced 2420f91af8c7SBarry Smith 242161778c46SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult(), PetscIntMultError() 2422f91af8c7SBarry Smith @*/ 2423f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2424f91af8c7SBarry Smith { 2425bafee8b4SSatish Balay PetscInt64 r; 2426f91af8c7SBarry Smith 2427f91af8c7SBarry Smith PetscFunctionBegin; 2428bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2429f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 243061778c46SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integers %d %d overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2431f91af8c7SBarry Smith #endif 2432f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 24332f18eb33SBarry Smith PetscFunctionReturn(0); 24342f18eb33SBarry Smith } 2435c5df96a5SBarry Smith 2436d382aafbSBarry Smith /* 24372981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2438d382aafbSBarry Smith */ 2439d382aafbSBarry Smith #if defined(hz) 2440d382aafbSBarry Smith # undef hz 2441d382aafbSBarry Smith #endif 2442d382aafbSBarry Smith 244315a5570dSLisandro Dalcin #include <limits.h> 244415a5570dSLisandro Dalcin 244515a5570dSLisandro Dalcin /* The number of bits in a byte */ 244615a5570dSLisandro Dalcin 244715a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 244815a5570dSLisandro Dalcin 2449d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2450d382aafbSBarry Smith # include <sys/types.h> 2451d382aafbSBarry Smith #endif 2452d382aafbSBarry Smith 2453d382aafbSBarry Smith /*MC 2454d382aafbSBarry Smith 245566d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 245666d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 245766d79e26SBarry Smith 245866d79e26SBarry Smith 245966d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 246066d79e26SBarry Smith 246166d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 246266d79e26SBarry Smith 246366d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 246466d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 246566d79e26SBarry Smith 246666d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 246766d79e26SBarry Smith 246866d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 246966d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 247066d79e26SBarry Smith version number (x.y.z). 247166d79e26SBarry Smith 247266d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 247366d79e26SBarry Smith 247466d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 247566d79e26SBarry Smith 247666d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 247766d79e26SBarry Smith 247866d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 247966d79e26SBarry Smith 248066d79e26SBarry Smith Level: intermediate 248166d79e26SBarry Smith 248266d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 248366d79e26SBarry Smith 248466d79e26SBarry Smith M*/ 248566d79e26SBarry Smith 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 249227710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24935f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2494d382aafbSBarry Smith 24956a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24966a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24976a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2499ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 250022ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2502f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 250360e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2504d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 25086c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 250917d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 251017d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 25125569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 251417df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 251639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2517014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2518745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 251939f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 25236c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 25246c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2525e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2526ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2527ce605777SToby Isaac 25284d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt,void*,size_t,int(*)(const void*,const void*,void*),void*); 2529676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt,PetscInt[]); 2530676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt,PetscMPIInt[]); 2531676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt,PetscReal[]); 25324d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt,void*,size_t,void*,size_t,int(*)(const void*,const void*,void*),void*); 2533676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt,PetscInt[],PetscInt[]); 2534676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt,PetscMPIInt[],PetscMPIInt[]); 2535676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2536676f2a66SJacob Faibussowitsch 2537014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2538014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2539d382aafbSBarry Smith 254076bdecfbSBarry Smith /*J 2541d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2542d382aafbSBarry Smith 2543d382aafbSBarry Smith Level: beginner 2544d382aafbSBarry Smith 2545e28ce29aSPatrick Sanan Notes: 2546e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 254725ccb61fSToby Isaac with the option --download-sprng or --download-random123 2548d382aafbSBarry Smith 25498f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 255076bdecfbSBarry Smith J*/ 255119fd82e9SBarry Smith typedef const char* PetscRandomType; 2552d382aafbSBarry Smith #define PETSCRAND "rand" 2553d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2554d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2555c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 255625ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2557808ba619SStefano Zampini #define PETSCCURAND "curand" 2558d382aafbSBarry Smith 2559d382aafbSBarry Smith /* Logging support */ 2560014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2561d382aafbSBarry Smith 2562607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2563d382aafbSBarry Smith 2564d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2565140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2566d382aafbSBarry Smith 2567bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 256819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom,PetscRandomType); 2569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 257019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom,PetscRandomType*); 2571fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2573d382aafbSBarry Smith 2574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2575014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2576014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2577808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom,PetscInt,PetscScalar*); 2578808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom,PetscInt,PetscReal*); 2579014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2581014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2582014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2583014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2584014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2585d382aafbSBarry Smith 2586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2587014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2592014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 259397540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 25948a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 259597540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2596d382aafbSBarry Smith 259730815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 259830815ce0SLisandro Dalcin 25999860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 26009860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2601f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2602f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2603014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2604014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2605014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2609014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2610c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2611e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2612c891a504SStefano Zampini #endif 2613d382aafbSBarry Smith 2614014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2615014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2616014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2617d382aafbSBarry Smith 2618014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2619014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool); 2620014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2621014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 26242a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2625d382aafbSBarry Smith 2626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2629014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2630014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2631cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2632cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2633d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2634d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2635d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2636d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 26376afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 26386afbe7ddSJed Brown MPI_Request**,MPI_Request**, 26396afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 26406afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 26416afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2642d382aafbSBarry Smith 26436145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 26446145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 26456145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 26466145cd65SJed Brown 2647014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2648d382aafbSBarry Smith 2649ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2650ce94432eSBarry Smith 265145487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 265245487dadSJed Brown 2653d382aafbSBarry Smith struct _n_PetscSubcomm { 2654d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2655d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2656306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 265745487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 265845487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2659708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 266045487dadSJed Brown PetscSubcommType type; 2661e5acf8a4SHong Zhang char *subcommprefix; 2662d382aafbSBarry Smith }; 2663d382aafbSBarry Smith 2664c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2665306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 266636be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2667014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 267165d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2672053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2673f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2674e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2675a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2676a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2677a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2678d382aafbSBarry Smith 26799962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 26809962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 26819962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 26829962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 26839962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 26849962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 26859962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 26869962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 26879962606eSBarry Smith 26885e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 26895f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 26905f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26915f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 26925f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 26935e71baefSBarry Smith 2694a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2695a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2696a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2697a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2698a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2699a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2700a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2701a32e93adSJunchao Zhang 270213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 27030f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 270413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2705137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2706137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2707137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 270813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 270913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 27100f453b92SJed Brown 27115e71baefSBarry Smith 2712471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2713471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2714471ecdacSJed Brown * possible. */ 27156a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2716d382aafbSBarry Smith 27179de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 27189de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 27199de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 27209de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 27219de0f6ecSBarry Smith 2722ace2fbaeSBarry Smith #include <stdarg.h> 2723ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2724ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2725ace2fbaeSBarry Smith 2726268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2727fbfcfee5SBarry Smith 27281f817a21SBarry Smith /*@C 27291f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 27301f817a21SBarry Smith 27311f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 27321f817a21SBarry Smith 27331f817a21SBarry Smith Input Parameters: 27341f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 27351f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 27361f817a21SBarry Smith 2737850545d0SSatish Balay Level: intermediate 2738850545d0SSatish Balay 2739f5f57ec0SBarry Smith Not available from Fortran 2740f5f57ec0SBarry Smith 27411f817a21SBarry Smith Options Database: 2742063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 27431f817a21SBarry Smith @*/ 2744dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2745dff31646SBarry Smith { 2746dff31646SBarry Smith size_t len; 2747dff31646SBarry Smith char *vstring; 2748dff31646SBarry Smith PetscErrorCode ierr; 2749dff31646SBarry Smith 27501f817a21SBarry Smith PetscFunctionBegin; 27518d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2752dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 275335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2754580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2755dff31646SBarry Smith if (set) *set = PETSC_TRUE; 27561f817a21SBarry Smith PetscFunctionReturn(0); 2757dff31646SBarry Smith } 2758dff31646SBarry Smith 2759b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2760fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2761fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2762f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2763fe278a28SBarry Smith 2764f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2765f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2766b967cddfSBarry Smith 27679f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 27689f4d3c52SBarry Smith 276904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2770763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2771dff31646SBarry Smith 277268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 27735dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2774d382aafbSBarry Smith 2775b2566f29SBarry Smith 2776b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2777503e1a2cSLisandro Dalcin PETSC_STATIC_INLINE unsigned int PetscStrHash(const char *str) 2778df05ca09SBarry Smith { 2779df05ca09SBarry Smith unsigned int c,hash = 5381; 2780df05ca09SBarry Smith 2781503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2782df05ca09SBarry Smith return hash; 2783df05ca09SBarry Smith } 278477a5e07dSBarry Smith 278577a5e07dSBarry Smith /*MC 278677a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 278777a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 278877a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 278977a5e07dSBarry Smith 2790d083f849SBarry Smith Collective 279177a5e07dSBarry Smith 279277a5e07dSBarry Smith Synopsis: 279377a5e07dSBarry Smith #include <petscsys.h> 279477a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 279577a5e07dSBarry Smith 279677a5e07dSBarry Smith Input Parameters: 2797df05ca09SBarry Smith + a - pointer to the input data to be reduced 2798df05ca09SBarry Smith . c - the number of MPI data items in a and b 2799df05ca09SBarry Smith . d - the MPI datatype, for example MPI_INT 2800df05ca09SBarry Smith . e - the MPI operation, for example MPI_SUM 2801df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 280277a5e07dSBarry Smith 280377a5e07dSBarry Smith Output Parameter: 2804df05ca09SBarry Smith . b - the reduced values 280577a5e07dSBarry Smith 2806e28ce29aSPatrick Sanan Notes: 2807e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 280877a5e07dSBarry Smith 2809df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2810df05ca09SBarry Smith 2811df05ca09SBarry Smith The error code this returns should be checked with CHKERRMPI() 2812df05ca09SBarry Smith 281377a5e07dSBarry Smith Level: developer 281477a5e07dSBarry Smith 281577a5e07dSBarry Smith .seealso: MPI_Allreduce() 281677a5e07dSBarry Smith M*/ 2817df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_SUCCESS; do {\ 2818df05ca09SBarry Smith PetscErrorCode _4_ierr; \ 2819df05ca09SBarry Smith PetscMPIInt a_b1[6],a_b2[6];\ 2820df05ca09SBarry Smith a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0];\ 2821df05ca09SBarry Smith a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2];\ 2822df05ca09SBarry Smith a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4];\ 2823df05ca09SBarry Smith _4_ierr = MPI_Allreduce(a_b1,a_b2,6,MPI_INT,MPI_MAX,fcomm);CHKERRMPI(_4_ierr);\ 2824df05ca09SBarry Smith if (-a_b2[0] != a_b2[1]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (code lines) on different processors");\ 2825df05ca09SBarry Smith if (-a_b2[2] != a_b2[3]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called in different locations (functions) on different processors");\ 2826df05ca09SBarry Smith if (-a_b2[4] != a_b2[5]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"MPI_Allreduce() called with different counts %d on different processors",c);\ 2827df05ca09SBarry Smith _4_ierr = MPI_Allreduce((a),(b),(c),d,e,(fcomm));CHKERRMPI(_4_ierr);\ 2828df05ca09SBarry Smith } while (0) 2829b2566f29SBarry Smith #else 2830df05ca09SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce((a),(b),(c),d,e,(fcomm)) 2831b2566f29SBarry Smith #endif 2832b2566f29SBarry Smith 2833b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 28348198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 28358198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 28362f065d89SBarry Smith #endif 28378198064fSBarry Smith 283812801b39SBarry Smith /* 283960fbe2beSVaclav Hapla List of external packages and queries on it 284060fbe2beSVaclav Hapla */ 284160fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[],PetscBool*); 284260fbe2beSVaclav Hapla 2843d382aafbSBarry Smith #endif 2844