1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 447d993e7Ssuyashtn Portions of this code are under: 547d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 6d382aafbSBarry Smith */ 76524c165SJacob Faibussowitsch #ifndef PETSCSYS_H 826bd1501SBarry Smith #define PETSCSYS_H 93ca90d2dSJacob Faibussowitsch 10d382aafbSBarry Smith /* ========================================================================== */ 11d382aafbSBarry Smith /* 12d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 131c77a0c5SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include that 141c77a0c5SBarry Smith PETSc's makefiles add to the compiler rules. 151c77a0c5SBarry Smith For --prefix installs the directory ${PETSC_ARCH} does not exist and petscconf.h is in the same 161cc8b206SBarry Smith directory as the other PETSc include files. 17d382aafbSBarry Smith */ 182c8e378dSBarry Smith #include <petscconf.h> 191c77a0c5SBarry Smith #include <petscconf_poison.h> 202c8e378dSBarry Smith #include <petscfix.h> 21bde483f2SJacob Faibussowitsch #include <petscmacros.h> 2233bb201bSJacob Faibussowitsch 23ac09b921SBarry Smith /* SUBMANSEC = Sys */ 24ac09b921SBarry Smith 2573fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 2673fca5a0SBarry Smith /* 2773fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2873fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2973fca5a0SBarry Smith */ 30216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 3173fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 3273fca5a0SBarry Smith #endif 33216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 3473fca5a0SBarry Smith #define _BSD_SOURCE 3573fca5a0SBarry Smith #endif 3607f00807SSatish Balay #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 3707f00807SSatish Balay #define _DEFAULT_SOURCE 3807f00807SSatish Balay #endif 39ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 40ea0fecefSShri Abhyankar #define _GNU_SOURCE 41ea0fecefSShri Abhyankar #endif 4273fca5a0SBarry Smith #endif 4373fca5a0SBarry Smith 44df4397b0SStefano Zampini #include <petscsystypes.h> 45df4397b0SStefano Zampini 46d382aafbSBarry Smith /* ========================================================================== */ 47d382aafbSBarry Smith 48d382aafbSBarry Smith /* 49d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 50d382aafbSBarry Smith 51d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 52d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 53d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 54d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 55d382aafbSBarry Smith mpicxx.h directly in their code 56d382aafbSBarry Smith */ 57fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 58d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1 59fa9e63e2SJed Brown #endif 60fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 61d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1 62fa9e63e2SJed Brown #endif 63e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 64e771154cSJed Brown #include <petsc/mpiuni/mpi.h> 65e771154cSJed Brown #else 662c8e378dSBarry Smith #include <mpi.h> 67e771154cSJed Brown #endif 6865013866SBarry Smith 69d382aafbSBarry Smith /* 70a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 71a7886beaSBarry Smith This usually happens because 72a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 73a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 74a7886beaSBarry Smith */ 75a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 766524c165SJacob Faibussowitsch #ifndef MPIUNI_H 77a7886beaSBarry Smith #error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 78a7886beaSBarry Smith #endif 7941f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 8041f4af4cSSatish Balay #if !defined(I_MPI_NUMVERSION) 8141f4af4cSSatish Balay #error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 8241f4af4cSSatish Balay #elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 8341f4af4cSSatish Balay #error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 8441f4af4cSSatish Balay #endif 8541f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 8641f4af4cSSatish Balay #if !defined(MVAPICH2_NUMVERSION) 8741f4af4cSSatish Balay #error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 8841f4af4cSSatish Balay #elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 8941f4af4cSSatish Balay #error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 9041f4af4cSSatish Balay #endif 91a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 9241f4af4cSSatish Balay #if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 93a7886beaSBarry Smith #error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 941c284764SMin RK #elif (MPICH_NUMVERSION / 100000000 != PETSC_HAVE_MPICH_NUMVERSION / 100000000) || (MPICH_NUMVERSION / 100000 < PETSC_HAVE_MPICH_NUMVERSION / 100000) || (MPICH_NUMVERSION / 100000 == PETSC_HAVE_MPICH_NUMVERSION / 100000 && MPICH_NUMVERSION % 100000 / 1000 < PETSC_HAVE_MPICH_NUMVERSION % 100000 / 1000) 95a7886beaSBarry Smith #error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 96a7886beaSBarry Smith #endif 97a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 98a7886beaSBarry Smith #if !defined(OMPI_MAJOR_VERSION) 99a7886beaSBarry Smith #error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 1001c284764SMin RK #elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION < PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_MINOR_VERSION == PETSC_HAVE_OMPI_MINOR_VERSION && OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 101c3ac57cfSSatish Balay #error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 102a7886beaSBarry Smith #endif 103d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 104d97fd468SStefano Zampini #if !defined(MSMPI_VER) 105d97fd468SStefano Zampini #error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 106d97fd468SStefano Zampini #elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 107d97fd468SStefano Zampini #error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 108d97fd468SStefano Zampini #endif 109d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 110d97fd468SStefano Zampini #error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 111a7886beaSBarry Smith #endif 112a7886beaSBarry Smith 113a7886beaSBarry Smith /* 1142981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 115d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 116d382aafbSBarry Smith */ 117d382aafbSBarry Smith #include <stdio.h> 118d382aafbSBarry Smith 119d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 120d382aafbSBarry Smith #if !defined(MPIAPI) 121d382aafbSBarry Smith #define MPIAPI 122d382aafbSBarry Smith #endif 123d382aafbSBarry Smith 12493d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_ENUM PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscEnum); 12593d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_BOOL PETSC_ATTRIBUTE_MPI_TYPE_TAG(PetscBool); 126e28ce29aSPatrick Sanan 127e28ce29aSPatrick Sanan /*MC 12887497f52SBarry Smith MPIU_INT - Portable MPI datatype corresponding to `PetscInt` independent of the precision of `PetscInt` 129e28ce29aSPatrick Sanan 130e28ce29aSPatrick Sanan Notes: 13187497f52SBarry Smith In MPI calls that require an MPI datatype that matches a `PetscInt` or array of `PetscInt` values, pass this value. 132e28ce29aSPatrick Sanan 133e28ce29aSPatrick Sanan Level: beginner 134e28ce29aSPatrick Sanan 135db781477SPatrick Sanan .seealso: `PetscReal`, `PetscScalar`, `PetscComplex`, `PetscInt`, `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 136e28ce29aSPatrick Sanan M*/ 137e28ce29aSPatrick Sanan 1387cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 139b7b8f77aSBarry Smith 140d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 141bd84f1cfSSatish Balay #define MPIU_INT MPIU_INT64 142a05e1a72SSatish Balay #define PetscInt_FMT PetscInt64_FMT 143d382aafbSBarry Smith #else 144d382aafbSBarry Smith #define MPIU_INT MPI_INT 145a05e1a72SSatish Balay #define PetscInt_FMT "d" 146d382aafbSBarry Smith #endif 147d382aafbSBarry Smith 148503cfb0cSBarry Smith /* 149503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 150503cfb0cSBarry Smith */ 15193d501b3SJacob Faibussowitsch PETSC_EXTERN MPI_Datatype MPIU_SIZE_T PETSC_ATTRIBUTE_MPI_TYPE_TAG(size_t); 152d382aafbSBarry Smith 153d382aafbSBarry Smith /* 154d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 155d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 156d382aafbSBarry Smith */ 157014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDOUT; 158d382aafbSBarry Smith 159d382aafbSBarry Smith /* 160d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 161d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 162d382aafbSBarry Smith */ 163014dd563SJed Brown PETSC_EXTERN FILE *PETSC_STDERR; 164d382aafbSBarry Smith 165c8b9133aSSatish Balay /* PetscPragmaSIMD - from CeedPragmaSIMD */ 166c8b9133aSSatish Balay 1675c993f7fSStefano Zampini #if defined(__NEC__) 1685c993f7fSStefano Zampini #define PetscPragmaSIMD _Pragma("_NEC ivdep") 1695c993f7fSStefano Zampini #elif defined(__INTEL_COMPILER) && !defined(_WIN32) 170c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("vector") 1711dba8834SJose E. Roman #elif defined(__GNUC__) && __GNUC__ >= 5 && !defined(__PGI) 172c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("GCC ivdep") 173e5518150SSatish Balay #elif defined(_OPENMP) && _OPENMP >= 201307 174e5518150SSatish Balay #if defined(_MSC_VER) 175160a5775SAli Reza Khaz'ali #define PetscPragmaSIMD __pragma(omp simd) 176e5518150SSatish Balay #else 177e5518150SSatish Balay #define PetscPragmaSIMD _Pragma("omp simd") 178e5518150SSatish Balay #endif 179c8b9133aSSatish Balay #elif defined(PETSC_HAVE_CRAY_VECTOR) 180c8b9133aSSatish Balay #define PetscPragmaSIMD _Pragma("_CRI ivdep") 181c8b9133aSSatish Balay #else 182c8b9133aSSatish Balay #define PetscPragmaSIMD 183c8b9133aSSatish Balay #endif 184c8b9133aSSatish Balay 185d382aafbSBarry Smith /* 186d382aafbSBarry Smith Declare extern C stuff after including external header files 187d382aafbSBarry Smith */ 188d382aafbSBarry Smith 1896a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 19070b3c8c7SBarry Smith 1916edef35eSSatish Balay PETSC_EXTERN PetscBool PETSC_RUNNING_ON_VALGRIND; 1928b49ba18SBarry Smith /* 193390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 1948b49ba18SBarry Smith */ 1958b49ba18SBarry Smith #include <petscmath.h> 1968b49ba18SBarry Smith 1976a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 198d382aafbSBarry Smith 199d382aafbSBarry Smith /*MC 2000298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 201d382aafbSBarry Smith 202d382aafbSBarry Smith Level: beginner 203d382aafbSBarry Smith 204e28ce29aSPatrick Sanan Note: 20587497f52SBarry Smith Accepted by many PETSc functions to not set a parameter and instead use some default 206d382aafbSBarry Smith 20787497f52SBarry Smith Fortran Note: 20887497f52SBarry Smith This macro does not exist in Fortran; you must use `PETSC_NULL_INTEGER`, `PETSC_NULL_DOUBLE_PRECISION` etc 209d382aafbSBarry Smith 210db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_DETERMINE` 211d382aafbSBarry Smith 212d382aafbSBarry Smith M*/ 213*f3fa974cSJacob Faibussowitsch #define PETSC_IGNORE PETSC_NULLPTR 214*f3fa974cSJacob Faibussowitsch #define PETSC_NULL PETSC_DEPRECATED_MACRO("GCC warning \"PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)\"") PETSC_NULLPTR 215c528d872SBarry Smith 216d382aafbSBarry Smith /*MC 217557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 218557d4da8SBarry Smith where you wish PETSc to use the default. 219557d4da8SBarry Smith 220557d4da8SBarry Smith Level: beginner 221557d4da8SBarry Smith 222db781477SPatrick Sanan .seealso: `PETSC_DEFAULT`, `PETSC_IGNORE`, `PETSC_DETERMINE` 223557d4da8SBarry Smith 224557d4da8SBarry Smith M*/ 225557d4da8SBarry Smith 226557d4da8SBarry Smith /*MC 227d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 228d382aafbSBarry Smith where you wish PETSc to compute the required value. 229d382aafbSBarry Smith 230d382aafbSBarry Smith Level: beginner 231d382aafbSBarry Smith 232e28ce29aSPatrick Sanan Developer Note: 23387497f52SBarry Smith I would like to use const `PetscInt` `PETSC_DETERMINE` = `PETSC_DECIDE`; but for 23487497f52SBarry Smith some reason this is not allowed by the standard even though `PETSC_DECIDE` is a constant value. 235557d4da8SBarry Smith 236db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_DEFAULT`, `PETSC_IGNORE`, `VecSetSizes()` 237d382aafbSBarry Smith 238d382aafbSBarry Smith M*/ 239d382aafbSBarry Smith 240d382aafbSBarry Smith /*MC 241557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 242557d4da8SBarry Smith where you wish PETSc to use the default. 243557d4da8SBarry Smith 244557d4da8SBarry Smith Level: beginner 245557d4da8SBarry Smith 24687497f52SBarry Smith Fortran Note: 24787497f52SBarry Smith You need to use `PETSC_DEFAULT_INTEGER` or `PETSC_DEFAULT_REAL`. 248557d4da8SBarry Smith 249db781477SPatrick Sanan .seealso: `PETSC_DECIDE`, `PETSC_IGNORE`, `PETSC_DETERMINE` 250557d4da8SBarry Smith 251557d4da8SBarry Smith M*/ 252*f3fa974cSJacob Faibussowitsch enum { 253*f3fa974cSJacob Faibussowitsch PETSC_DECIDE = -1, 254*f3fa974cSJacob Faibussowitsch PETSC_DETERMINE = PETSC_DECIDE, 255*f3fa974cSJacob Faibussowitsch PETSC_DEFAULT = -2 256*f3fa974cSJacob Faibussowitsch }; 257557d4da8SBarry Smith 258557d4da8SBarry Smith /*MC 25987497f52SBarry Smith PETSC_COMM_WORLD - the equivalent of the `MPI_COMM_WORLD` communicator which represents 260ea8fe74dSBarry Smith all the processes that PETSc knows about. 261d382aafbSBarry Smith 262d382aafbSBarry Smith Level: beginner 263d382aafbSBarry Smith 264e28ce29aSPatrick Sanan Notes: 26587497f52SBarry Smith By default `PETSC_COMM_WORLD` and `MPI_COMM_WORLD` are identical unless you wish to 26687497f52SBarry Smith run PETSc on ONLY a subset of `MPI_COMM_WORLD`. In that case create your new (smaller) 26787497f52SBarry Smith communicator, call it, say comm, and set `PETSC_COMM_WORLD` = comm BEFORE calling 26887497f52SBarry Smith PetscInitialize(), but after `MPI_Init()` has been called. 269a990b902SBarry Smith 27087497f52SBarry Smith The value of `PETSC_COMM_WORLD` should never be USED/accessed before `PetscInitialize()` 271a990b902SBarry Smith is called because it may not have a valid value yet. 272d382aafbSBarry Smith 273db781477SPatrick Sanan .seealso: `PETSC_COMM_SELF` 274d382aafbSBarry Smith 275d382aafbSBarry Smith M*/ 276014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 277d382aafbSBarry Smith 278d382aafbSBarry Smith /*MC 27987497f52SBarry Smith PETSC_COMM_SELF - This is always `MPI_COMM_SELF` 280d382aafbSBarry Smith 281d382aafbSBarry Smith Level: beginner 282d382aafbSBarry Smith 283e28ce29aSPatrick Sanan Notes: 284e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 285a990b902SBarry Smith 286db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD` 287d382aafbSBarry Smith 288d382aafbSBarry Smith M*/ 289d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 290d382aafbSBarry Smith 2916de5d289SStefano Zampini /*MC 2926de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 29387497f52SBarry Smith MPI with `MPI_Init_thread()`. 2946de5d289SStefano Zampini 2956de5d289SStefano Zampini Level: beginner 2966de5d289SStefano Zampini 2976de5d289SStefano Zampini Notes: 29887497f52SBarry Smith By default `PETSC_MPI_THREAD_REQUIRED` equals `MPI_THREAD_FUNNELED`. 2996de5d289SStefano Zampini 300db781477SPatrick Sanan .seealso: `PetscInitialize()` 3016de5d289SStefano Zampini 3026de5d289SStefano Zampini M*/ 3036de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 3046de5d289SStefano Zampini 305d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 3068ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 307014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 308014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 3094cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 310d382aafbSBarry Smith 311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm), PetscErrorCode (*)(MPI_Comm)); 312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm, MPI_Comm *, int *); 313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm *); 31457f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommGetComm(MPI_Comm, MPI_Comm *); 31557f21012SBarry Smith PETSC_EXTERN PetscErrorCode PetscCommRestoreComm(MPI_Comm, MPI_Comm *); 316d382aafbSBarry Smith 31759e55d94SJunchao Zhang #if defined(PETSC_HAVE_KOKKOS) 31859e55d94SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscKokkosInitializeCheck(void); /* Initialize Kokkos if not yet. */ 31959e55d94SJunchao Zhang #endif 32059e55d94SJunchao Zhang 32171438e86SJunchao Zhang #if defined(PETSC_HAVE_NVSHMEM) 32271438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscBeganNvshmem; 32371438e86SJunchao Zhang PETSC_EXTERN PetscBool PetscNvshmemInitialized; 32471438e86SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscNvshmemFinalize(void); 32571438e86SJunchao Zhang #endif 32671438e86SJunchao Zhang 327540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 328540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 329540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool *); 330540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 331540e20f2SPierre Jolivet #endif 332540e20f2SPierre Jolivet 333d382aafbSBarry Smith /*MC 33487497f52SBarry Smith PetscMalloc - Allocates memory, One should use `PetscNew()`, `PetscMalloc1()` or `PetscCalloc1()` usually instead of this 335d382aafbSBarry Smith 336eca87e8dSBarry Smith Synopsis: 337aaa7dc30SBarry Smith #include <petscsys.h> 338eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 339eca87e8dSBarry Smith 340eca87e8dSBarry Smith Not Collective 341eca87e8dSBarry Smith 342d382aafbSBarry Smith Input Parameter: 343d382aafbSBarry Smith . m - number of bytes to allocate 344d382aafbSBarry Smith 345d382aafbSBarry Smith Output Parameter: 346d382aafbSBarry Smith . result - memory allocated 347d382aafbSBarry Smith 348d382aafbSBarry Smith Level: beginner 349d382aafbSBarry Smith 35049d7da52SJed Brown Notes: 35149d7da52SJed Brown Memory is always allocated at least double aligned 352d382aafbSBarry Smith 35387497f52SBarry Smith It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to `PetscFree()`. 354d382aafbSBarry Smith 355db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 356d382aafbSBarry Smith 357d382aafbSBarry Smith M*/ 358071fcb05SBarry Smith #define PetscMalloc(a, b) ((*PetscTrMalloc)((a), PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 359d382aafbSBarry Smith 360d382aafbSBarry Smith /*MC 361d5b43468SJose E. Roman PetscRealloc - Reallocates memory 3623221ece2SMatthew G. Knepley 3633221ece2SMatthew G. Knepley Synopsis: 3643221ece2SMatthew G. Knepley #include <petscsys.h> 3653221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 3663221ece2SMatthew G. Knepley 3673221ece2SMatthew G. Knepley Not Collective 3683221ece2SMatthew G. Knepley 3693221ece2SMatthew G. Knepley Input Parameters: 3703221ece2SMatthew G. Knepley + m - number of bytes to allocate 37192f119d6SBarry Smith - result - previous memory 3723221ece2SMatthew G. Knepley 3733221ece2SMatthew G. Knepley Output Parameter: 3743221ece2SMatthew G. Knepley . result - new memory allocated 3753221ece2SMatthew G. Knepley 3763221ece2SMatthew G. Knepley Level: developer 3773221ece2SMatthew G. Knepley 3783221ece2SMatthew G. Knepley Notes: 3793221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 3803221ece2SMatthew G. Knepley 381db781477SPatrick Sanan .seealso: `PetscMalloc()`, `PetscFree()`, `PetscNew()` 3823221ece2SMatthew G. Knepley 3833221ece2SMatthew G. Knepley M*/ 3843221ece2SMatthew G. Knepley #define PetscRealloc(a, b) ((*PetscTrRealloc)((a), __LINE__, PETSC_FUNCTION_NAME, __FILE__, (void **)(b))) 3853221ece2SMatthew G. Knepley 3863221ece2SMatthew G. Knepley /*MC 38787497f52SBarry Smith PetscAddrAlign - Rounds up an address to `PETSC_MEMALIGN` alignment 388d382aafbSBarry Smith 389d382aafbSBarry Smith Synopsis: 390aaa7dc30SBarry Smith #include <petscsys.h> 391d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 392d382aafbSBarry Smith 393eca87e8dSBarry Smith Not Collective 394eca87e8dSBarry Smith 395eca87e8dSBarry Smith Input Parameters: 396eca87e8dSBarry Smith . addr - address to align (any pointer type) 397eca87e8dSBarry Smith 398d382aafbSBarry Smith Level: developer 399d382aafbSBarry Smith 400db781477SPatrick Sanan .seealso: `PetscMallocAlign()` 401d382aafbSBarry Smith 402d382aafbSBarry Smith M*/ 403*f3fa974cSJacob Faibussowitsch #define PetscAddrAlign(a) ((void *)((((PETSC_UINTPTR_T)(a)) + (PETSC_MEMALIGN - 1)) & ~(PETSC_MEMALIGN - 1))) 404d382aafbSBarry Smith 405d382aafbSBarry Smith /*MC 40687497f52SBarry Smith PetscCalloc - Allocates a cleared (zeroed) memory region aligned to `PETSC_MEMALIGN` 4078f51dc47SJunchao Zhang 4088f51dc47SJunchao Zhang Synopsis: 4098f51dc47SJunchao Zhang #include <petscsys.h> 4108f51dc47SJunchao Zhang PetscErrorCode PetscCalloc(size_t m,void **result) 4118f51dc47SJunchao Zhang 4128f51dc47SJunchao Zhang Not Collective 4138f51dc47SJunchao Zhang 4148f51dc47SJunchao Zhang Input Parameter: 4158f51dc47SJunchao Zhang . m - number of bytes to allocate 4168f51dc47SJunchao Zhang 4178f51dc47SJunchao Zhang Output Parameter: 4188f51dc47SJunchao Zhang . result - memory allocated 4198f51dc47SJunchao Zhang 4208f51dc47SJunchao Zhang Level: beginner 4218f51dc47SJunchao Zhang 4228f51dc47SJunchao Zhang Notes: 4238f51dc47SJunchao Zhang Memory is always allocated at least double aligned. This macro is useful in allocating memory pointed by void pointers 4248f51dc47SJunchao Zhang 4258f51dc47SJunchao Zhang It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 4268f51dc47SJunchao Zhang 427db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()` 4288f51dc47SJunchao Zhang 4298f51dc47SJunchao Zhang M*/ 430*f3fa974cSJacob Faibussowitsch #define PetscCalloc(m, result) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)m), (result)) 4318f51dc47SJunchao Zhang 4328f51dc47SJunchao Zhang /*MC 43387497f52SBarry Smith PetscMalloc1 - Allocates an array of memory aligned to `PETSC_MEMALIGN` 434d382aafbSBarry Smith 435eca87e8dSBarry Smith Synopsis: 436aaa7dc30SBarry Smith #include <petscsys.h> 437785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 438785e854fSJed Brown 439785e854fSJed Brown Not Collective 440785e854fSJed Brown 441785e854fSJed Brown Input Parameter: 442390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 443785e854fSJed Brown 444785e854fSJed Brown Output Parameter: 4451fe1b817SJunchao Zhang . r1 - memory allocated 446785e854fSJed Brown 447e28ce29aSPatrick Sanan Note: 448e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 44987497f52SBarry Smith multiply the number of elements requested by the `sizeof()` the type. For example use 450390e1bf2SBarry Smith $ PetscInt *id; 451390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 452390e1bf2SBarry Smith not 453390e1bf2SBarry Smith $ PetscInt *id; 454390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 455390e1bf2SBarry Smith 45687497f52SBarry Smith Does not zero the memory allocated, use `PetscCalloc1()` to obtain memory that has been zeroed. 457390e1bf2SBarry Smith 458390e1bf2SBarry Smith Level: beginner 459785e854fSJed Brown 460db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 461785e854fSJed Brown 462785e854fSJed Brown M*/ 463*f3fa974cSJacob Faibussowitsch #define PetscMalloc1(m1, r1) PetscMallocA(1, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 464785e854fSJed Brown 465785e854fSJed Brown /*MC 46687497f52SBarry Smith PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to `PETSC_MEMALIGN` 4671795a4d1SJed Brown 4681795a4d1SJed Brown Synopsis: 469aaa7dc30SBarry Smith #include <petscsys.h> 4701795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 4711795a4d1SJed Brown 4721795a4d1SJed Brown Not Collective 4731795a4d1SJed Brown 4741795a4d1SJed Brown Input Parameter: 4751795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 4761795a4d1SJed Brown 4771795a4d1SJed Brown Output Parameter: 4781fe1b817SJunchao Zhang . r1 - memory allocated 4791795a4d1SJed Brown 480e28ce29aSPatrick Sanan Notes: 48187497f52SBarry Smith See `PetsMalloc1()` for more details on usage. 482390e1bf2SBarry Smith 483390e1bf2SBarry Smith Level: beginner 4841795a4d1SJed Brown 485db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 4861795a4d1SJed Brown 4871795a4d1SJed Brown M*/ 488*f3fa974cSJacob Faibussowitsch #define PetscCalloc1(m1, r1) PetscMallocA(1, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1)) 4891795a4d1SJed Brown 4901795a4d1SJed Brown /*MC 49187497f52SBarry Smith PetscMalloc2 - Allocates 2 arrays of memory both aligned to `PETSC_MEMALIGN` 492d382aafbSBarry Smith 493eca87e8dSBarry Smith Synopsis: 494aaa7dc30SBarry Smith #include <petscsys.h> 495dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 496eca87e8dSBarry Smith 497eca87e8dSBarry Smith Not Collective 498eca87e8dSBarry Smith 499d8d19677SJose E. Roman Input Parameters: 500d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 501dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 502d382aafbSBarry Smith 503d8d19677SJose E. Roman Output Parameters: 504d382aafbSBarry Smith + r1 - memory allocated in first chunk 505d382aafbSBarry Smith - r2 - memory allocated in second chunk 506d382aafbSBarry Smith 507d382aafbSBarry Smith Level: developer 508d382aafbSBarry Smith 509db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc2()` 510d382aafbSBarry Smith 511d382aafbSBarry Smith M*/ 512*f3fa974cSJacob Faibussowitsch #define PetscMalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 513d382aafbSBarry Smith 514d382aafbSBarry Smith /*MC 51587497f52SBarry Smith PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to `PETSC_MEMALIGN` 516d382aafbSBarry Smith 517eca87e8dSBarry Smith Synopsis: 518aaa7dc30SBarry Smith #include <petscsys.h> 5191795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 520eca87e8dSBarry Smith 521eca87e8dSBarry Smith Not Collective 522eca87e8dSBarry Smith 523d8d19677SJose E. Roman Input Parameters: 524d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5251795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5261795a4d1SJed Brown 527d8d19677SJose E. Roman Output Parameters: 5281795a4d1SJed Brown + r1 - memory allocated in first chunk 5291795a4d1SJed Brown - r2 - memory allocated in second chunk 5301795a4d1SJed Brown 5311795a4d1SJed Brown Level: developer 5321795a4d1SJed Brown 533db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc2()` 5341795a4d1SJed Brown 5351795a4d1SJed Brown M*/ 536*f3fa974cSJacob Faibussowitsch #define PetscCalloc2(m1, r1, m2, r2) PetscMallocA(2, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2)) 5371795a4d1SJed Brown 5381795a4d1SJed Brown /*MC 53987497f52SBarry Smith PetscMalloc3 - Allocates 3 arrays of memory, all aligned to `PETSC_MEMALIGN` 540d382aafbSBarry Smith 541d382aafbSBarry Smith Synopsis: 542aaa7dc30SBarry Smith #include <petscsys.h> 543dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 544d382aafbSBarry Smith 545d382aafbSBarry Smith Not Collective 546d382aafbSBarry Smith 547d8d19677SJose E. Roman Input Parameters: 548d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 549d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 550dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 551d382aafbSBarry Smith 552d8d19677SJose E. Roman Output Parameters: 553d382aafbSBarry Smith + r1 - memory allocated in first chunk 554d382aafbSBarry Smith . r2 - memory allocated in second chunk 555d382aafbSBarry Smith - r3 - memory allocated in third chunk 556d382aafbSBarry Smith 557d382aafbSBarry Smith Level: developer 558d382aafbSBarry Smith 559db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc3()`, `PetscFree3()` 560d382aafbSBarry Smith 561d382aafbSBarry Smith M*/ 562*f3fa974cSJacob Faibussowitsch #define PetscMalloc3(m1, r1, m2, r2, m3, r3) \ 563*f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 564d382aafbSBarry Smith 565d382aafbSBarry Smith /*MC 56687497f52SBarry Smith PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 567d382aafbSBarry Smith 568eca87e8dSBarry Smith Synopsis: 569aaa7dc30SBarry Smith #include <petscsys.h> 5701795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 571eca87e8dSBarry Smith 572eca87e8dSBarry Smith Not Collective 573eca87e8dSBarry Smith 574d8d19677SJose E. Roman Input Parameters: 575d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 576d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 5771795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 5781795a4d1SJed Brown 579d8d19677SJose E. Roman Output Parameters: 5801795a4d1SJed Brown + r1 - memory allocated in first chunk 5811795a4d1SJed Brown . r2 - memory allocated in second chunk 5821795a4d1SJed Brown - r3 - memory allocated in third chunk 5831795a4d1SJed Brown 5841795a4d1SJed Brown Level: developer 5851795a4d1SJed Brown 586db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscCalloc2()`, `PetscMalloc3()`, `PetscFree3()` 5871795a4d1SJed Brown 5881795a4d1SJed Brown M*/ 589*f3fa974cSJacob Faibussowitsch #define PetscCalloc3(m1, r1, m2, r2, m3, r3) \ 590*f3fa974cSJacob Faibussowitsch PetscMallocA(3, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3)) 5911795a4d1SJed Brown 5921795a4d1SJed Brown /*MC 59387497f52SBarry Smith PetscMalloc4 - Allocates 4 arrays of memory, all aligned to `PETSC_MEMALIGN` 594d382aafbSBarry Smith 595d382aafbSBarry Smith Synopsis: 596aaa7dc30SBarry Smith #include <petscsys.h> 597dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 598d382aafbSBarry Smith 599d382aafbSBarry Smith Not Collective 600d382aafbSBarry Smith 601d8d19677SJose E. Roman Input Parameters: 602d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 603d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 604d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 605dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 606d382aafbSBarry Smith 607d8d19677SJose E. Roman Output Parameters: 608d382aafbSBarry Smith + r1 - memory allocated in first chunk 609d382aafbSBarry Smith . r2 - memory allocated in second chunk 610d382aafbSBarry Smith . r3 - memory allocated in third chunk 611d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 612d382aafbSBarry Smith 613d382aafbSBarry Smith Level: developer 614d382aafbSBarry Smith 615db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 616d382aafbSBarry Smith 617d382aafbSBarry Smith M*/ 6189371c9d4SSatish Balay #define PetscMalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 619*f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 620d382aafbSBarry Smith 621d382aafbSBarry Smith /*MC 62287497f52SBarry Smith PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 623d382aafbSBarry Smith 624eca87e8dSBarry Smith Synopsis: 625aaa7dc30SBarry Smith #include <petscsys.h> 6261795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 627eca87e8dSBarry Smith 628eca87e8dSBarry Smith Not Collective 629eca87e8dSBarry Smith 630e28ce29aSPatrick Sanan Input Parameters: 631d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 632d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 633d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6341795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 6351795a4d1SJed Brown 636e28ce29aSPatrick Sanan Output Parameters: 6371795a4d1SJed Brown + r1 - memory allocated in first chunk 6381795a4d1SJed Brown . r2 - memory allocated in second chunk 6391795a4d1SJed Brown . r3 - memory allocated in third chunk 6401795a4d1SJed Brown - r4 - memory allocated in fourth chunk 6411795a4d1SJed Brown 6421795a4d1SJed Brown Level: developer 6431795a4d1SJed Brown 644db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc4()`, `PetscFree4()` 6451795a4d1SJed Brown 6461795a4d1SJed Brown M*/ 6479371c9d4SSatish Balay #define PetscCalloc4(m1, r1, m2, r2, m3, r3, m4, r4) \ 648*f3fa974cSJacob Faibussowitsch PetscMallocA(4, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4)) 6491795a4d1SJed Brown 6501795a4d1SJed Brown /*MC 65187497f52SBarry Smith PetscMalloc5 - Allocates 5 arrays of memory, all aligned to `PETSC_MEMALIGN` 652d382aafbSBarry Smith 653d382aafbSBarry Smith Synopsis: 654aaa7dc30SBarry Smith #include <petscsys.h> 655dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 656d382aafbSBarry Smith 657d382aafbSBarry Smith Not Collective 658d382aafbSBarry Smith 659e28ce29aSPatrick Sanan Input Parameters: 660d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 661d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 662d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 663d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 664dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 665d382aafbSBarry Smith 666e28ce29aSPatrick Sanan Output Parameters: 667d382aafbSBarry Smith + r1 - memory allocated in first chunk 668d382aafbSBarry Smith . r2 - memory allocated in second chunk 669d382aafbSBarry Smith . r3 - memory allocated in third chunk 670d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 671d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 672d382aafbSBarry Smith 673d382aafbSBarry Smith Level: developer 674d382aafbSBarry Smith 675db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc5()`, `PetscFree5()` 676d382aafbSBarry Smith 677d382aafbSBarry Smith M*/ 6789371c9d4SSatish Balay #define PetscMalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 679*f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 680d382aafbSBarry Smith 681d382aafbSBarry Smith /*MC 68287497f52SBarry Smith PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 683d382aafbSBarry Smith 684eca87e8dSBarry Smith Synopsis: 685aaa7dc30SBarry Smith #include <petscsys.h> 6861795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 687eca87e8dSBarry Smith 688eca87e8dSBarry Smith Not Collective 689eca87e8dSBarry Smith 690e28ce29aSPatrick Sanan Input Parameters: 691d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 692d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 693d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 694d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 6951795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 6961795a4d1SJed Brown 697e28ce29aSPatrick Sanan Output Parameters: 6981795a4d1SJed Brown + r1 - memory allocated in first chunk 6991795a4d1SJed Brown . r2 - memory allocated in second chunk 7001795a4d1SJed Brown . r3 - memory allocated in third chunk 7011795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7021795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7031795a4d1SJed Brown 7041795a4d1SJed Brown Level: developer 7051795a4d1SJed Brown 706db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc5()`, `PetscFree5()` 7071795a4d1SJed Brown 7081795a4d1SJed Brown M*/ 7099371c9d4SSatish Balay #define PetscCalloc5(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5) \ 710*f3fa974cSJacob Faibussowitsch PetscMallocA(5, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5)) 711d382aafbSBarry Smith 712d382aafbSBarry Smith /*MC 71387497f52SBarry Smith PetscMalloc6 - Allocates 6 arrays of memory, all aligned to `PETSC_MEMALIGN` 714d382aafbSBarry Smith 715d382aafbSBarry Smith Synopsis: 716aaa7dc30SBarry Smith #include <petscsys.h> 717dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 718d382aafbSBarry Smith 719d382aafbSBarry Smith Not Collective 720d382aafbSBarry Smith 721e28ce29aSPatrick Sanan Input Parameters: 722d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 723d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 724d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 725d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 726d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 727dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 728d382aafbSBarry Smith 729e28ce29aSPatrick Sanan Output Parameteasr: 730d382aafbSBarry Smith + r1 - memory allocated in first chunk 731d382aafbSBarry Smith . r2 - memory allocated in second chunk 732d382aafbSBarry Smith . r3 - memory allocated in third chunk 733d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 734d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 735d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 736d382aafbSBarry Smith 737d382aafbSBarry Smith Level: developer 738d382aafbSBarry Smith 739db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc6()`, `PetscFree3()`, `PetscFree4()`, `PetscFree5()`, `PetscFree6()` 740d382aafbSBarry Smith 741d382aafbSBarry Smith M*/ 7429371c9d4SSatish Balay #define PetscMalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 743*f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 744d382aafbSBarry Smith 745d382aafbSBarry Smith /*MC 74687497f52SBarry Smith PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 747d382aafbSBarry Smith 748eca87e8dSBarry Smith Synopsis: 749aaa7dc30SBarry Smith #include <petscsys.h> 7501795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 751eca87e8dSBarry Smith 752eca87e8dSBarry Smith Not Collective 753eca87e8dSBarry Smith 754e28ce29aSPatrick Sanan Input Parameters: 755d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 756d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 757d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 758d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 759d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 7601795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 7611795a4d1SJed Brown 762e28ce29aSPatrick Sanan Output Parameters: 7631795a4d1SJed Brown + r1 - memory allocated in first chunk 7641795a4d1SJed Brown . r2 - memory allocated in second chunk 7651795a4d1SJed Brown . r3 - memory allocated in third chunk 7661795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7671795a4d1SJed Brown . r5 - memory allocated in fifth chunk 7681795a4d1SJed Brown - r6 - memory allocated in sixth chunk 7691795a4d1SJed Brown 7701795a4d1SJed Brown Level: developer 7711795a4d1SJed Brown 772db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc6()`, `PetscFree6()` 7731795a4d1SJed Brown 7741795a4d1SJed Brown M*/ 7759371c9d4SSatish Balay #define PetscCalloc6(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6) \ 776*f3fa974cSJacob Faibussowitsch PetscMallocA(6, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6)) 7771795a4d1SJed Brown 7781795a4d1SJed Brown /*MC 77987497f52SBarry Smith PetscMalloc7 - Allocates 7 arrays of memory, all aligned to `PETSC_MEMALIGN` 780d382aafbSBarry Smith 781d382aafbSBarry Smith Synopsis: 782aaa7dc30SBarry Smith #include <petscsys.h> 783dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 784d382aafbSBarry Smith 785d382aafbSBarry Smith Not Collective 786d382aafbSBarry Smith 787e28ce29aSPatrick Sanan Input Parameters: 788d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 789d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 790d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 791d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 792d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 793d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 794dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 795d382aafbSBarry Smith 796e28ce29aSPatrick Sanan Output Parameters: 797d382aafbSBarry Smith + r1 - memory allocated in first chunk 798d382aafbSBarry Smith . r2 - memory allocated in second chunk 799d382aafbSBarry Smith . r3 - memory allocated in third chunk 800d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 801d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 802d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 803eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 804d382aafbSBarry Smith 805d382aafbSBarry Smith Level: developer 806d382aafbSBarry Smith 807db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscCalloc7()`, `PetscFree7()` 808d382aafbSBarry Smith 809d382aafbSBarry Smith M*/ 8109371c9d4SSatish Balay #define PetscMalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 811*f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_FALSE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 812d382aafbSBarry Smith 813d382aafbSBarry Smith /*MC 81487497f52SBarry Smith PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to `PETSC_MEMALIGN` 8151795a4d1SJed Brown 8161795a4d1SJed Brown Synopsis: 817aaa7dc30SBarry Smith #include <petscsys.h> 8181795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8191795a4d1SJed Brown 8201795a4d1SJed Brown Not Collective 8211795a4d1SJed Brown 822e28ce29aSPatrick Sanan Input Parameters: 8231795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8241795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8251795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8261795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8271795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8281795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8291795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8301795a4d1SJed Brown 831e28ce29aSPatrick Sanan Output Parameters: 8321795a4d1SJed Brown + r1 - memory allocated in first chunk 8331795a4d1SJed Brown . r2 - memory allocated in second chunk 8341795a4d1SJed Brown . r3 - memory allocated in third chunk 8351795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8361795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8371795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8381795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8391795a4d1SJed Brown 8401795a4d1SJed Brown Level: developer 8411795a4d1SJed Brown 842db781477SPatrick Sanan .seealso: `PetscFree()`, `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscMalloc7()`, `PetscFree7()` 8431795a4d1SJed Brown 8441795a4d1SJed Brown M*/ 8459371c9d4SSatish Balay #define PetscCalloc7(m1, r1, m2, r2, m3, r3, m4, r4, m5, r5, m6, r6, m7, r7) \ 846*f3fa974cSJacob Faibussowitsch PetscMallocA(7, PETSC_TRUE, __LINE__, PETSC_FUNCTION_NAME, __FILE__, ((size_t)((size_t)m1) * sizeof(**(r1))), (r1), ((size_t)((size_t)m2) * sizeof(**(r2))), (r2), ((size_t)((size_t)m3) * sizeof(**(r3))), (r3), ((size_t)((size_t)m4) * sizeof(**(r4))), (r4), ((size_t)((size_t)m5) * sizeof(**(r5))), (r5), ((size_t)((size_t)m6) * sizeof(**(r6))), (r6), ((size_t)((size_t)m7) * sizeof(**(r7))), (r7)) 8471795a4d1SJed Brown 8481795a4d1SJed Brown /*MC 84987497f52SBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to `PETSC_MEMALIGN` 850d382aafbSBarry Smith 851eca87e8dSBarry Smith Synopsis: 852aaa7dc30SBarry Smith #include <petscsys.h> 853b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 854eca87e8dSBarry Smith 855eca87e8dSBarry Smith Not Collective 856eca87e8dSBarry Smith 857d382aafbSBarry Smith Output Parameter: 858b00a9115SJed Brown . result - memory allocated, sized to match pointer type 859d382aafbSBarry Smith 860d382aafbSBarry Smith Level: beginner 861d382aafbSBarry Smith 862fea72eb4SStefano Zampini .seealso: `PetscFree()`, `PetscMalloc()`, `PetscCalloc1()`, `PetscMalloc1()` 863d382aafbSBarry Smith 864d382aafbSBarry Smith M*/ 865b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1, (b)) 866ad0619ddSBarry Smith 8674dfa11a4SJacob Faibussowitsch #define PetscNewLog(o, b) PETSC_DEPRECATED_MACRO("GCC warning \"PetscNewLog is deprecated, use PetscNew() instead (since version 3.18)\"") PetscNew((b)) 868d382aafbSBarry Smith 869d382aafbSBarry Smith /*MC 870d382aafbSBarry Smith PetscFree - Frees memory 871d382aafbSBarry Smith 872eca87e8dSBarry Smith Synopsis: 873aaa7dc30SBarry Smith #include <petscsys.h> 874eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 875eca87e8dSBarry Smith 876eca87e8dSBarry Smith Not Collective 877eca87e8dSBarry Smith 878d382aafbSBarry Smith Input Parameter: 8797f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 880d382aafbSBarry Smith 881d382aafbSBarry Smith Level: beginner 882d382aafbSBarry Smith 88349d7da52SJed Brown Notes: 88487497f52SBarry Smith Do not free memory obtained with `PetscMalloc2()`, `PetscCalloc2()` etc, they must be freed with `PetscFree2()` etc. 885390e1bf2SBarry Smith 88687497f52SBarry Smith It is safe to call `PetscFree()` on a NULL pointer. 887d382aafbSBarry Smith 888fea72eb4SStefano Zampini .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc1()`, `PetscCalloc1()` 889d382aafbSBarry Smith 890d382aafbSBarry Smith M*/ 891*f3fa974cSJacob Faibussowitsch #define PetscFree(a) ((*PetscTrFree)((void *)(a), __LINE__, PETSC_FUNCTION_NAME, __FILE__) || ((a) = PETSC_NULLPTR, 0)) 892d382aafbSBarry Smith 893d382aafbSBarry Smith /*MC 89487497f52SBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with `PetscMalloc2()` 895d382aafbSBarry Smith 896eca87e8dSBarry Smith Synopsis: 897aaa7dc30SBarry Smith #include <petscsys.h> 898eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 899eca87e8dSBarry Smith 900eca87e8dSBarry Smith Not Collective 901eca87e8dSBarry Smith 902e28ce29aSPatrick Sanan Input Parameters: 903d382aafbSBarry Smith + memory1 - memory to free 904d382aafbSBarry Smith - memory2 - 2nd memory to free 905d382aafbSBarry Smith 906d382aafbSBarry Smith Level: developer 907d382aafbSBarry Smith 90895452b02SPatrick Sanan Notes: 90987497f52SBarry Smith Memory must have been obtained with `PetscMalloc2()` 910d382aafbSBarry Smith 911db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()` 912d382aafbSBarry Smith 913d382aafbSBarry Smith M*/ 914ba282f50SJed Brown #define PetscFree2(m1, m2) PetscFreeA(2, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2)) 915d382aafbSBarry Smith 916d382aafbSBarry Smith /*MC 91787497f52SBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with `PetscMalloc3()` 918d382aafbSBarry Smith 919eca87e8dSBarry Smith Synopsis: 920aaa7dc30SBarry Smith #include <petscsys.h> 921eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 922eca87e8dSBarry Smith 923eca87e8dSBarry Smith Not Collective 924eca87e8dSBarry Smith 925e28ce29aSPatrick Sanan Input Parameters: 926d382aafbSBarry Smith + memory1 - memory to free 927d382aafbSBarry Smith . memory2 - 2nd memory to free 928d382aafbSBarry Smith - memory3 - 3rd memory to free 929d382aafbSBarry Smith 930d382aafbSBarry Smith Level: developer 931d382aafbSBarry Smith 93295452b02SPatrick Sanan Notes: 93387497f52SBarry Smith Memory must have been obtained with `PetscMalloc3()` 934d382aafbSBarry Smith 935db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()` 936d382aafbSBarry Smith 937d382aafbSBarry Smith M*/ 938ba282f50SJed Brown #define PetscFree3(m1, m2, m3) PetscFreeA(3, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3)) 939d382aafbSBarry Smith 940d382aafbSBarry Smith /*MC 94187497f52SBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with `PetscMalloc4()` 942d382aafbSBarry Smith 943eca87e8dSBarry Smith Synopsis: 944aaa7dc30SBarry Smith #include <petscsys.h> 945eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 946eca87e8dSBarry Smith 947eca87e8dSBarry Smith Not Collective 948eca87e8dSBarry Smith 949e28ce29aSPatrick Sanan Input Parameters: 950d382aafbSBarry Smith + m1 - memory to free 951d382aafbSBarry Smith . m2 - 2nd memory to free 952d382aafbSBarry Smith . m3 - 3rd memory to free 953d382aafbSBarry Smith - m4 - 4th memory to free 954d382aafbSBarry Smith 955d382aafbSBarry Smith Level: developer 956d382aafbSBarry Smith 95795452b02SPatrick Sanan Notes: 95887497f52SBarry Smith Memory must have been obtained with `PetscMalloc4()` 959d382aafbSBarry Smith 960db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()` 961d382aafbSBarry Smith 962d382aafbSBarry Smith M*/ 963ba282f50SJed Brown #define PetscFree4(m1, m2, m3, m4) PetscFreeA(4, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4)) 964d382aafbSBarry Smith 965d382aafbSBarry Smith /*MC 96687497f52SBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with `PetscMalloc5()` 967d382aafbSBarry Smith 968eca87e8dSBarry Smith Synopsis: 969aaa7dc30SBarry Smith #include <petscsys.h> 970eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 971eca87e8dSBarry Smith 972eca87e8dSBarry Smith Not Collective 973eca87e8dSBarry Smith 974e28ce29aSPatrick Sanan Input Parameters: 975d382aafbSBarry Smith + m1 - memory to free 976d382aafbSBarry Smith . m2 - 2nd memory to free 977d382aafbSBarry Smith . m3 - 3rd memory to free 978d382aafbSBarry Smith . m4 - 4th memory to free 979d382aafbSBarry Smith - m5 - 5th memory to free 980d382aafbSBarry Smith 981d382aafbSBarry Smith Level: developer 982d382aafbSBarry Smith 98395452b02SPatrick Sanan Notes: 98487497f52SBarry Smith Memory must have been obtained with `PetscMalloc5()` 985d382aafbSBarry Smith 986db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()` 987d382aafbSBarry Smith 988d382aafbSBarry Smith M*/ 989ba282f50SJed Brown #define PetscFree5(m1, m2, m3, m4, m5) PetscFreeA(5, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5)) 990d382aafbSBarry Smith 991d382aafbSBarry Smith /*MC 99287497f52SBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with `PetscMalloc6()` 993d382aafbSBarry Smith 994eca87e8dSBarry Smith Synopsis: 995aaa7dc30SBarry Smith #include <petscsys.h> 996eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 997eca87e8dSBarry Smith 998eca87e8dSBarry Smith Not Collective 999eca87e8dSBarry Smith 1000e28ce29aSPatrick Sanan Input Parameters: 1001d382aafbSBarry Smith + m1 - memory to free 1002d382aafbSBarry Smith . m2 - 2nd memory to free 1003d382aafbSBarry Smith . m3 - 3rd memory to free 1004d382aafbSBarry Smith . m4 - 4th memory to free 1005d382aafbSBarry Smith . m5 - 5th memory to free 1006d382aafbSBarry Smith - m6 - 6th memory to free 1007d382aafbSBarry Smith 1008d382aafbSBarry Smith Level: developer 1009d382aafbSBarry Smith 101095452b02SPatrick Sanan Notes: 101187497f52SBarry Smith Memory must have been obtained with `PetscMalloc6()` 1012d382aafbSBarry Smith 1013db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()` 1014d382aafbSBarry Smith 1015d382aafbSBarry Smith M*/ 1016ba282f50SJed Brown #define PetscFree6(m1, m2, m3, m4, m5, m6) PetscFreeA(6, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6)) 1017d382aafbSBarry Smith 1018d382aafbSBarry Smith /*MC 101987497f52SBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with `PetscMalloc7()` 1020d382aafbSBarry Smith 1021eca87e8dSBarry Smith Synopsis: 1022aaa7dc30SBarry Smith #include <petscsys.h> 1023eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1024eca87e8dSBarry Smith 1025eca87e8dSBarry Smith Not Collective 1026eca87e8dSBarry Smith 1027e28ce29aSPatrick Sanan Input Parameters: 1028d382aafbSBarry Smith + m1 - memory to free 1029d382aafbSBarry Smith . m2 - 2nd memory to free 1030d382aafbSBarry Smith . m3 - 3rd memory to free 1031d382aafbSBarry Smith . m4 - 4th memory to free 1032d382aafbSBarry Smith . m5 - 5th memory to free 1033d382aafbSBarry Smith . m6 - 6th memory to free 1034d382aafbSBarry Smith - m7 - 7th memory to free 1035d382aafbSBarry Smith 1036d382aafbSBarry Smith Level: developer 1037d382aafbSBarry Smith 103895452b02SPatrick Sanan Notes: 103987497f52SBarry Smith Memory must have been obtained with `PetscMalloc7()` 1040d382aafbSBarry Smith 1041db781477SPatrick Sanan .seealso: `PetscNew()`, `PetscMalloc()`, `PetscMalloc2()`, `PetscFree()`, `PetscMalloc3()`, `PetscMalloc4()`, `PetscMalloc5()`, `PetscMalloc6()`, 1042db781477SPatrick Sanan `PetscMalloc7()` 1043d382aafbSBarry Smith 1044d382aafbSBarry Smith M*/ 1045ba282f50SJed Brown #define PetscFree7(m1, m2, m3, m4, m5, m6, m7) PetscFreeA(7, __LINE__, PETSC_FUNCTION_NAME, __FILE__, &(m1), &(m2), &(m3), &(m4), &(m5), &(m6), &(m7)) 1046d382aafbSBarry Smith 1047ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int, PetscBool, int, const char *, const char *, size_t, void *, ...); 1048ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int, int, const char *, const char *, void *, ...); 1049071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t, PetscBool, int, const char[], const char[], void **); 1050efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void *, int, const char[], const char[]); 10513221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t, int, const char[], const char[], void **); 1052ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 105392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t, PetscBool, int, const char[], const char[], void **), PetscErrorCode (*)(void *, int, const char[], const char[]), PetscErrorCode (*)(size_t, int, const char[], const char[], void **)); 1054014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1055d382aafbSBarry Smith 1056d382aafbSBarry Smith /* 1057c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1058c1706be6SHong Zhang */ 1059c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1060c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 106131f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 106231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 106331f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 106431f06eaaSHong Zhang #endif 106559af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP) 106659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocSetHIPHost(void); 106759af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode PetscMallocResetHIPHost(void); 106859af0bd3SScott Kruger #endif 106959af0bd3SScott Kruger 1070a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 107136763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1072a5057860SBarry Smith 1073a5057860SBarry Smith /* 107466d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1075d382aafbSBarry Smith */ 1076014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 107792f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1078014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1079014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1080e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1081e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int, PetscLogDouble *); 108292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool, PetscBool); 108392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool *, PetscBool *, PetscBool *); 1084efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int, const char[], const char[]); 108592f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 108692f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool *); 1087608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeSet(PetscBool); 1088608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocLogRequestedSizeGet(PetscBool *); 1089d382aafbSBarry Smith 10906a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType, MPI_Datatype *); 1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype, PetscDataType *); 1093014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType, size_t *); 10948e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char *, PetscDataType *, PetscBool *); 1095d382aafbSBarry Smith 1096d382aafbSBarry Smith /* 1097d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1098d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1099d382aafbSBarry Smith functionality and/or error checking. 1100d382aafbSBarry Smith */ 1101014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void *, const void *, size_t, PetscBool *); 1102014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[], size_t *); 1103d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[], char, int *, char ***); 1104014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int, char **); 1105014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[], const char[], PetscBool *); 1106014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[], const char[], PetscBool *); 1107014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[], const char[], PetscBool *); 1108014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[], const char[], size_t, PetscBool *); 1109014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[], const char[]); 1110014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[], const char[]); 1111a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[], const char[], size_t); 1112014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[], const char[], size_t); 1113014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[], char, char *[]); 1114014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11152f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1116014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[], char, char *[]); 1117014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[], const char[], char *[]); 1118014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[], const char[], char *[]); 1119014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[], const char[], PetscBool *); 11202c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[], const char[], PetscBool *); 1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[], const char *const *, PetscInt *); 1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[], char *[]); 112347340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const *, char ***); 11246fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char ***); 11256991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt, const char *const *, char ***); 11266991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt, char ***); 1127014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm, const char[], char[], size_t); 1128d382aafbSBarry Smith 1129573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[], const char[], PetscBool *); 1130573b0fb4SBarry Smith 113198e514b7SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[], char, PetscToken *); 1132014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken, char *[]); 1133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken *); 1134d382aafbSBarry Smith 1135e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[], const char[], char, PetscBool *); 113680b92c66SBarry Smith PETSC_EXTERN const char *PetscBasename(const char[]); 1137a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt, const char *const *, const char *, PetscInt *, PetscBool *); 1138a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const *, const char *, PetscEnum *, PetscBool *); 1139a53986e1SJed Brown 1140d382aafbSBarry Smith /* 1141d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1142d382aafbSBarry Smith */ 1143367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1144570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1145de272c7aSSatish Balay PETSC_EXTERN MPI_Op MPIU_SUM; 1146014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1147014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1148d9822059SBarry Smith #else 1149de272c7aSSatish Balay #define MPIU_SUM MPI_SUM 1150d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1151d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1152d9822059SBarry Smith #endif 115362e5d2d2SJDBetteridge PETSC_EXTERN MPI_Op Petsc_Garbage_SetIntersectOp; 115462e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 115562e5d2d2SJDBetteridge 11569e517322SPierre Jolivet #if defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16) 1157613bf2b2SPierre Jolivet /*MC 11589e517322SPierre Jolivet MPIU_SUM___FP16___FLOAT128 - MPI_Op that acts as a replacement for MPI_SUM with 11599e517322SPierre Jolivet custom MPI_Datatype `MPIU___FLOAT128`, `MPIU___COMPLEX128`, and `MPIU___FP16`. 1160613bf2b2SPierre Jolivet 1161613bf2b2SPierre Jolivet Level: advanced 1162613bf2b2SPierre Jolivet 1163613bf2b2SPierre Jolivet Developer Note: 1164613bf2b2SPierre Jolivet This should be unified with `MPIU_SUM` 1165613bf2b2SPierre Jolivet 1166613bf2b2SPierre Jolivet .seealso: `MPIU_REAL`, `MPIU_SCALAR`, `MPIU_COMPLEX` 1167613bf2b2SPierre Jolivet M*/ 11689e517322SPierre Jolivet PETSC_EXTERN MPI_Op MPIU_SUM___FP16___FLOAT128; 1169613bf2b2SPierre Jolivet #endif 1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm, const PetscInt[], PetscInt *, PetscInt *); 1171d382aafbSBarry Smith 117293d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Send(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 117393d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIULong_Recv(void *, PetscInt, MPI_Datatype, PetscMPIInt, PetscMPIInt, MPI_Comm) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(1, 3); 1174eb3f98d2SBarry Smith 117595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1176d6a4318aSJed Brown 1177639ff905SBarry Smith /* 1178639ff905SBarry Smith Defines PETSc error handling. 1179639ff905SBarry Smith */ 1180639ff905SBarry Smith #include <petscerror.h> 1181d382aafbSBarry Smith 1182660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabled; /* code is running in the PETSc test harness CI */ 1183660278c0SBarry Smith PETSC_EXTERN PetscBool PetscCIEnabledPortableErrorOutput; /* error output is stripped to ensure portability of error messages across systems */ 1184660278c0SBarry Smith PETSC_EXTERN const char *PetscCIFilename(const char *); 1185660278c0SBarry Smith PETSC_EXTERN int PetscCILinenumber(int); 1186660278c0SBarry Smith 1187*f3fa974cSJacob Faibussowitsch #define PETSC_SMALLEST_CLASSID ((PetscClassId)1211211) 1188014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1189014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[], PetscClassId *); 119181256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject, PetscObjectId *); 119281256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject, PetscObjectId, PetscBool *); 119381256985SMatthew G. Knepley 1194d382aafbSBarry Smith /* 1195d382aafbSBarry Smith Routines that get memory usage information from the OS 1196d382aafbSBarry Smith */ 1197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1200b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1201d382aafbSBarry Smith 1202014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1203d382aafbSBarry Smith 1204d382aafbSBarry Smith /* 1205d382aafbSBarry Smith Initialization of PETSc 1206d382aafbSBarry Smith */ 1207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int *, char ***, const char[], const char[]); 1208014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int, char **, const char[], const char[]); 1209014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1210014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1211014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1212014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1213014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1214014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int *, char ***); 1215014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1216014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1217d382aafbSBarry Smith 1218014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1219607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1220d382aafbSBarry Smith 1221014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[], const char[]); 1222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1223014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject, const char[]); 1225d382aafbSBarry Smith 1226a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscErrorCode (*)(void), void *, PetscErrorCode (*)(void **), PetscBool *); 1227a50e088cSMatthew G. Knepley 1228d382aafbSBarry Smith /* 1229d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12302981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1231d382aafbSBarry Smith */ 1232638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1233638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1234638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith /* 1237d382aafbSBarry Smith Functions that can act on any PETSc object. 1238d382aafbSBarry Smith */ 1239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject *); 1240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject, MPI_Comm *); 1241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject, PetscClassId *); 1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject, const char *[]); 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject, const char *[]); 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject, const char[]); 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject, const char *[]); 1246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject, PetscInt); 1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject, PetscInt *); 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject, PetscObject, PetscInt); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject, PetscInt *); 1251014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject, PetscMPIInt *); 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject, const char[], PetscObject); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject, const char[]); 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject, const char[], PetscObject *); 1256bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject, const char[], void (*)(void)); 1257*f3fa974cSJacob Faibussowitsch #define PetscObjectComposeFunction(a, b, d) PetscObjectComposeFunction_Private((a), (b), (PetscVoidFunction)(d)) 1258014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 12600eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 12610eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject, PetscObject); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm, PetscMPIInt *); 1263d382aafbSBarry Smith 1264665c2dedSJed Brown #include <petscviewertypes.h> 1265639ff905SBarry Smith #include <petscoptions.h> 1266639ff905SBarry Smith 1267608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceSet(PetscViewer, PetscBool, PetscLogDouble); 1268608c71bfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMallocTraceGet(PetscBool *); 1269608c71bfSMatthew G. Knepley 12700633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm, PetscInt, PetscObject *, PetscInt *, PetscInt *); 12710633abcbSJed Brown 1272c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer, const char[]); 1273dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject, PetscViewer); 1274639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject, PetscViewer); 12750005d66cSJed Brown #define PetscObjectQueryFunction(obj, name, fptr) PetscObjectQueryFunction_Private((obj), (name), (PetscVoidFunction *)(fptr)) 12760005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject, const char[], void (**)(void)); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject, const char[]); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject, const char[]); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject, const char[]); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject, const char *[]); 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject, const char[]); 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1284685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject, PetscObject, const char[]); 1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject, const char[], PetscBool *); 1287013e2dc7SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectObjectTypeCompare(PetscObject, PetscObject, PetscBool *); 12884099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject, const char[], PetscBool *); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1290b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject, PetscBool *, const char[], ...); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1293d382aafbSBarry Smith 1294e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 12957aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1296e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1297e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject, PetscBool); 1298e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1299e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1300e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1301e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1302e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1303e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1304e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 130515681b3cSBarry Smith 1306ec7429eaSBarry Smith #else 13077aab2a10SBarry Smith #define PetscSAWsBlock() 0 1308e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1309e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj, flg) 0 1310e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1311e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1312e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1313e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1314e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1315e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1316e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 131715681b3cSBarry Smith 1318ec7429eaSBarry Smith #endif 1319b90c6cbeSBarry Smith 132082b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[], PetscDLMode, PetscDLHandle *); 132182b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 132282b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle, const char[], void **); 1323258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDLAddr(void (*)(void), char **); 1324258ec3d2SMatthew G. Knepley #ifdef PETSC_HAVE_CXX 1325258ec3d2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscDemangleSymbol(const char *, char **); 1326258ec3d2SMatthew G. Knepley #endif 13277d5d4d99SBarry Smith 1328a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void *, PetscStack **); 1329a64a8e02SBarry Smith 1330dfb7d7afSStefano Zampini PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE *, PetscBool); 1331140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList *); 1332140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList, const char[], PetscObject *); 1333140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList, PetscObject, char **, PetscBool *); 1334140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *, const char[], PetscObject); 1335140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *, const char[]); 1336140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList, PetscObjectList *); 1337d382aafbSBarry Smith 1338d382aafbSBarry Smith /* 1339503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1340d382aafbSBarry Smith link libraries that will be loaded as needed. 1341d382aafbSBarry Smith */ 1342a240a19fSJed Brown 1343a240a19fSJed Brown #define PetscFunctionListAdd(list, name, fptr) PetscFunctionListAdd_Private((list), (name), (PetscVoidFunction)(fptr)) 1344a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList *, const char[], void (*)(void)); 1345140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList *); 13460e6b6b59SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFunctionListClear(PetscFunctionList); 13471c9cd337SJed Brown #define PetscFunctionListFind(list, name, fptr) PetscFunctionListFind_Private((list), (name), (PetscVoidFunction *)(fptr)) 13481c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList, const char[], void (**)(void)); 134944ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm, FILE *, const char[], const char[], const char[], const char[], PetscFunctionList, const char[], const char[]); 1350140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList, PetscFunctionList *); 1351140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList, PetscViewer); 1352140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList, const char ***, int *); 13532e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintNonEmpty(PetscFunctionList); 13542e956fe4SStefano Zampini PETSC_EXTERN PetscErrorCode PetscFunctionListPrintAll(void); 1355d382aafbSBarry Smith 1356014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm, PetscDLLibrary *, const char[]); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm, PetscDLLibrary *, const char[]); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm, PetscDLLibrary *, const char[], const char[], void **); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm, const char[], char *, size_t, PetscBool *); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm, const char[], PetscDLLibrary *); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1364d382aafbSBarry Smith 1365d382aafbSBarry Smith /* 1366d382aafbSBarry Smith Useful utility routines 1367d382aafbSBarry Smith */ 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm, PetscInt *, PetscInt *); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm, PetscInt, PetscInt *, PetscInt *); 1370d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm, PetscInt *, PetscInt *); 1371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm, PetscMPIInt); 1372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm, PetscMPIInt); 1373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE *); 137558b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm, const PetscInt[2], PetscInt[2]); 137658b5cd2aSSatish Balay PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm, const PetscReal[2], PetscReal[2]); 1377d382aafbSBarry Smith 137864ac3b0dSPatrick Sanan /*MC 137987497f52SBarry Smith PetscNot - negates a logical type value and returns result as a `PetscBool` 1380503cfb0cSBarry Smith 138164ac3b0dSPatrick Sanan Level: beginner 138264ac3b0dSPatrick Sanan 1383a1cb98faSBarry Smith Note: 1384a1cb98faSBarry Smith This is useful in cases like 1385a1cb98faSBarry Smith .vb 1386a1cb98faSBarry Smith int *a; 1387a1cb98faSBarry Smith PetscBool flag = PetscNot(a) 1388a1cb98faSBarry Smith .ve 1389a1cb98faSBarry Smith where !a would not return a `PetscBool` because we cannot provide a cast from int to `PetscBool` in C. 1390a1cb98faSBarry Smith 1391a1cb98faSBarry Smith .seealso: `PetscBool`, `PETSC_TRUE`, `PETSC_FALSE` 139264ac3b0dSPatrick Sanan M*/ 1393d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1394503cfb0cSBarry Smith 1395d382aafbSBarry Smith /*MC 1396d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1397d382aafbSBarry Smith 1398cd05f99aSJacob Faibussowitsch Not Collective, only applies on rank 0; No Fortran Support 1399cf53795eSBarry Smith 1400d382aafbSBarry Smith Synopsis: 1401aaa7dc30SBarry Smith #include <petscsys.h> 1402659f7ba0SBarry Smith PetscErrorCode (*PetscHelpPrintf)(MPI_Comm comm, const char format[],args); 1403d382aafbSBarry Smith 1404d382aafbSBarry Smith Input Parameters: 1405659f7ba0SBarry Smith + comm - the MPI communicator over which the help message is printed 1406d382aafbSBarry Smith . format - the usual printf() format string 1407659f7ba0SBarry Smith - args - arguments to be printed 1408d382aafbSBarry Smith 1409d382aafbSBarry Smith Level: developer 1410d382aafbSBarry Smith 1411659f7ba0SBarry Smith Note: 1412659f7ba0SBarry Smith You can change how help messages are printed by replacing the function pointer with a function that does not simply write to stdout. 1413659f7ba0SBarry Smith 1414659f7ba0SBarry Smith To use, write your own function, for example, 1415659f7ba0SBarry Smith $PetscErrorCode mypetschelpprintf(MPI_Comm comm,const char format[],....) 1416659f7ba0SBarry Smith ${ 1417659f7ba0SBarry Smith $ PetscFunctionReturn(0); 1418659f7ba0SBarry Smith $} 1419d5b43468SJose E. Roman then do the assignment 1420659f7ba0SBarry Smith $ PetscHelpPrintf = mypetschelpprintf; 142187497f52SBarry Smith You can do the assignment before `PetscInitialize()`. 1422659f7ba0SBarry Smith 142387497f52SBarry Smith The default routine used is called `PetscHelpPrintfDefault()`. 1424d382aafbSBarry Smith 1425db781477SPatrick Sanan .seealso: `PetscFPrintf()`, `PetscSynchronizedPrintf()`, `PetscErrorPrintf()` 1426d382aafbSBarry Smith M*/ 14273ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1428d382aafbSBarry Smith 1429fcfd50ebSBarry Smith /* 1430fcfd50ebSBarry Smith Defines PETSc profiling. 1431fcfd50ebSBarry Smith */ 14322c8e378dSBarry Smith #include <petsclog.h> 1433fcfd50ebSBarry Smith 1434fcfd50ebSBarry Smith /* 1435fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1436fcfd50ebSBarry Smith */ 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[], char[]); 1438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm, const char[], const char[], FILE **); 1439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm, FILE *); 14403ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14413ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14423ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintf(char *, size_t, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14433ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char *, size_t, const char[], size_t *, ...) PETSC_ATTRIBUTE_FORMAT(3, 5); 14441b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[], size_t, const char *, PetscInt, const PetscReal[]); 1445fcfd50ebSBarry Smith 14463ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14473ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char[], ...) PETSC_ATTRIBUTE_FORMAT(1, 2); 14483ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 1449d382aafbSBarry Smith 1450d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char *, size_t *); 1451d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char *, char *); 1452d781fa04SBarry Smith 1453d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm, const char[], const char[], const char[], FILE **); 1455016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm, FILE *); 145674ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1457d382aafbSBarry Smith #endif 1458d382aafbSBarry Smith 14593ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm, const char[], ...) PETSC_ATTRIBUTE_FORMAT(2, 3); 14603ca90d2dSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm, FILE *, const char[], ...) PETSC_ATTRIBUTE_FORMAT(3, 4); 14610ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm, FILE *); 1462014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm, FILE *, size_t, char[]); 1463014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm, const char[], const char[], FILE **); 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm, const char[], const char[], FILE **); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char *[]); 1466d382aafbSBarry Smith 1467014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer, void **); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer, void *); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer *); 1471014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm, PetscContainer *); 1472014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void *)); 1473b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void *); 1474d382aafbSBarry Smith 1475d382aafbSBarry Smith /* 1476d382aafbSBarry Smith For use in debuggers 1477d382aafbSBarry Smith */ 1478014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1479014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt, const PetscInt[], PetscViewer); 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt, const PetscReal[], PetscViewer); 1482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt, const PetscScalar[], PetscViewer); 1483d382aafbSBarry Smith 1484a663daf8SBarry Smith #include <stddef.h> 1485a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1486d382aafbSBarry Smith #include <stdlib.h> 14876c7e564aSBarry Smith 14884a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1489d382aafbSBarry Smith #include <xmmintrin.h> 1490d382aafbSBarry Smith #endif 1491d382aafbSBarry Smith 1492d382aafbSBarry Smith /*@C 1493580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1494580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 149587497f52SBarry Smith take place correctly. Use `PetscMemcpy()` if the locations do not overlap 1496580bdb30SBarry Smith 1497580bdb30SBarry Smith Not Collective 1498580bdb30SBarry Smith 1499580bdb30SBarry Smith Input Parameters: 1500580bdb30SBarry Smith + b - pointer to initial memory space 1501580bdb30SBarry Smith . a - pointer to copy space 1502580bdb30SBarry Smith - n - length (in bytes) of space to copy 1503580bdb30SBarry Smith 1504580bdb30SBarry Smith Level: intermediate 1505580bdb30SBarry Smith 150687497f52SBarry Smith Notes: 150787497f52SBarry Smith `PetscArraymove()` is preferred 1508580bdb30SBarry Smith 150987497f52SBarry Smith This routine is analogous to `memmove()`. 151087497f52SBarry Smith 151187497f52SBarry Smith Developers Note: 151287497f52SBarry Smith This is inlined for performance 1513580bdb30SBarry Smith 1514db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscStrallocpy()`, 1515db781477SPatrick Sanan `PetscArraymove()` 1516580bdb30SBarry Smith @*/ 1517d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemmove(void *a, const void *b, size_t n) 1518d71ae5a4SJacob Faibussowitsch { 1519580bdb30SBarry Smith PetscFunctionBegin; 1520*f3fa974cSJacob Faibussowitsch if (PetscUnlikely((n == 0) || (a == b))) PetscFunctionReturn(0); 1521*f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes to null pointer (Argument #1)", n); 1522*f3fa974cSJacob Faibussowitsch PetscAssert(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes from a null pointer (Argument #2)", n); 1523*f3fa974cSJacob Faibussowitsch #if PetscDefined(HAVE_MEMMOVE) 1524*f3fa974cSJacob Faibussowitsch memmove((char *)a, (const char *)b, n); 1525*f3fa974cSJacob Faibussowitsch #else 1526580bdb30SBarry Smith if (a < b) { 1527*f3fa974cSJacob Faibussowitsch if (a <= b - n) { 1528*f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1529*f3fa974cSJacob Faibussowitsch } else { 1530*f3fa974cSJacob Faibussowitsch const size_t ptr_diff = (size_t)(b - a); 1531*f3fa974cSJacob Faibussowitsch 1532*f3fa974cSJacob Faibussowitsch memcpy(a, b, ptr_diff); 1533*f3fa974cSJacob Faibussowitsch PetscCall(PetscMemmove((void *)b, b + ptr_diff, n - ptr_diff)); 1534580bdb30SBarry Smith } 1535580bdb30SBarry Smith } else { 1536*f3fa974cSJacob Faibussowitsch if (b <= a - n) { 1537*f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1538*f3fa974cSJacob Faibussowitsch } else { 1539*f3fa974cSJacob Faibussowitsch const size_t ptr_diff = (size_t)(a - b); 1540*f3fa974cSJacob Faibussowitsch 1541*f3fa974cSJacob Faibussowitsch memcpy((void *)(b + n), b + (n - ptr_diff), ptr_diff); 1542*f3fa974cSJacob Faibussowitsch PetscCall(PetscMemmove(a, b, n - ptr_diff)); 1543580bdb30SBarry Smith } 1544580bdb30SBarry Smith } 1545580bdb30SBarry Smith #endif 1546580bdb30SBarry Smith PetscFunctionReturn(0); 1547580bdb30SBarry Smith } 1548580bdb30SBarry Smith 1549d382aafbSBarry Smith /*@C 1550d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1551d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 155287497f52SBarry Smith `PetscMemmove()` in that case. 1553d382aafbSBarry Smith 1554d382aafbSBarry Smith Not Collective 1555d382aafbSBarry Smith 1556d382aafbSBarry Smith Input Parameters: 1557d382aafbSBarry Smith + b - pointer to initial memory space 1558d382aafbSBarry Smith - n - length (in bytes) of space to copy 1559d382aafbSBarry Smith 1560d382aafbSBarry Smith Output Parameter: 1561d382aafbSBarry Smith . a - pointer to copy space 1562d382aafbSBarry Smith 1563d382aafbSBarry Smith Level: intermediate 1564d382aafbSBarry Smith 1565d382aafbSBarry Smith Compile Option: 156687497f52SBarry Smith `PETSC_PREFER_DCOPY_FOR_MEMCPY` will cause the BLAS dcopy() routine to be used 1567d382aafbSBarry Smith for memory copies on double precision values. 156887497f52SBarry Smith `PETSC_PREFER_COPY_FOR_MEMCPY` will cause C code to be used 1569d382aafbSBarry Smith for memory copies on double precision values. 157087497f52SBarry Smith `PETSC_PREFER_FORTRAN_FORMEMCPY` will cause Fortran code to be used 1571d382aafbSBarry Smith for memory copies on double precision values. 1572d382aafbSBarry Smith 157387497f52SBarry Smith Notes: 157487497f52SBarry Smith Prefer `PetscArraycpy()` 157587497f52SBarry Smith 157687497f52SBarry Smith This routine is analogous to `memcpy()`. 157787497f52SBarry Smith 15781fd49c25SBarry Smith Not available from Fortran 15791fd49c25SBarry Smith 158087497f52SBarry Smith Developer Note: 158187497f52SBarry Smith This is inlined for fastest performance 1582f5f57ec0SBarry Smith 1583db781477SPatrick Sanan .seealso: `PetscMemzero()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1584d382aafbSBarry Smith @*/ 1585d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemcpy(void *a, const void *b, size_t n) 1586d71ae5a4SJacob Faibussowitsch { 1587*f3fa974cSJacob Faibussowitsch const PETSC_UINTPTR_T al = (PETSC_UINTPTR_T)a; 1588*f3fa974cSJacob Faibussowitsch const PETSC_UINTPTR_T bl = (PETSC_UINTPTR_T)b; 1589*f3fa974cSJacob Faibussowitsch 1590a7e36092SMatthew G Knepley PetscFunctionBegin; 1591*f3fa974cSJacob Faibussowitsch if (PetscUnlikely((n == 0) || (a == b))) PetscFunctionReturn(0); 1592*f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes to a null pointer (Argument #1)", n); 1593*f3fa974cSJacob Faibussowitsch PetscAssert(b, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to copy %zu bytes from a null pointer (Argument #2)", n); 1594*f3fa974cSJacob Faibussowitsch PetscAssert(!(((al > bl) && (al - bl) < n) || (bl - al) < n), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Memory regions overlap: either use PetscMemmove()\nor make sure your copy regions and lengths are correct.\nLength (bytes) %zu first address %" PRIxPTR " second address %" PRIxPTR, n, al, bl); 1595*f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_DCOPY_FOR_MEMCPY) || PetscDefined(PREFER_COPY_FOR_MEMCPY) || PetscDefined(PREFER_FORTRAN_FORMEMCPY)) { 1596*f3fa974cSJacob Faibussowitsch if (!(al % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1597*f3fa974cSJacob Faibussowitsch const size_t scalar_len = n / sizeof(PetscScalar); 1598*f3fa974cSJacob Faibussowitsch const PetscScalar *x = (PetscScalar *)b; 1599*f3fa974cSJacob Faibussowitsch PetscScalar *y = (PetscScalar *)a; 1600*f3fa974cSJacob Faibussowitsch 1601*f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_DCOPY_FOR_MEMCPY) 1602*f3fa974cSJacob Faibussowitsch { 1603*f3fa974cSJacob Faibussowitsch const PetscBLASInt one = 1; 1604*f3fa974cSJacob Faibussowitsch PetscBLASInt blen; 1605*f3fa974cSJacob Faibussowitsch 1606*f3fa974cSJacob Faibussowitsch PetscCall(PetscBLASIntCast(scalar_len, &blen)); 1607*f3fa974cSJacob Faibussowitsch PetscCallBLAS("BLAScopy", BLAScopy_(&blen, x, &one, y, &one)); 16089a202e32SJacob Faibussowitsch } 1609*f3fa974cSJacob Faibussowitsch #elif PetscDefined(PREFER_FORTRAN_FORMEMCPY) 1610*f3fa974cSJacob Faibussowitsch fortrancopy_(&scalar_len, x, y); 1611a7e36092SMatthew G Knepley #else 1612*f3fa974cSJacob Faibussowitsch for (size_t i = 0; i < scalar_len; i++) y[i] = x[i]; 1613a7e36092SMatthew G Knepley #endif 1614*f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1615d382aafbSBarry Smith } 1616d382aafbSBarry Smith } 1617*f3fa974cSJacob Faibussowitsch memcpy(a, b, n); 1618d382aafbSBarry Smith PetscFunctionReturn(0); 1619d382aafbSBarry Smith } 1620d382aafbSBarry Smith 1621d382aafbSBarry Smith /*@C 1622d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1623d382aafbSBarry Smith 1624d382aafbSBarry Smith Not Collective 1625d382aafbSBarry Smith 1626d382aafbSBarry Smith Input Parameters: 1627d382aafbSBarry Smith + a - pointer to beginning memory location 1628d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1629d382aafbSBarry Smith 1630d382aafbSBarry Smith Level: intermediate 1631d382aafbSBarry Smith 1632d382aafbSBarry Smith Compile Option: 163387497f52SBarry Smith `PETSC_PREFER_BZERO` - on certain machines (the IBM RS6000) the bzero() routine happens 1634d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1635d382aafbSBarry Smith 163687497f52SBarry Smith Notes: 16371fd49c25SBarry Smith Not available from Fortran 16381fd49c25SBarry Smith 163987497f52SBarry Smith Prefer `PetscArrayzero()` 164087497f52SBarry Smith 164187497f52SBarry Smith Developer Note: 164287497f52SBarry Smith This is inlined for fastest performance 1643503cfb0cSBarry Smith 1644db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()` 1645d382aafbSBarry Smith @*/ 1646d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMemzero(void *a, size_t n) 1647d71ae5a4SJacob Faibussowitsch { 1648*f3fa974cSJacob Faibussowitsch PetscFunctionBegin; 1649*f3fa974cSJacob Faibussowitsch if (PetscUnlikely(n == 0)) PetscFunctionReturn(0); 1650*f3fa974cSJacob Faibussowitsch PetscAssert(a, PETSC_COMM_SELF, PETSC_ERR_ARG_NULL, "Trying to zero %zu bytes at a null pointer", n); 1651*f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_ZERO_FOR_MEMZERO) || PetscDefined(PREFER_FORTRAN_FOR_MEMZERO)) { 1652*f3fa974cSJacob Faibussowitsch if (!(((PETSC_UINTPTR_T)a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1653*f3fa974cSJacob Faibussowitsch const size_t scalar_len = n / sizeof(PetscScalar); 1654d382aafbSBarry Smith PetscScalar *x = (PetscScalar *)a; 1655*f3fa974cSJacob Faibussowitsch 1656*f3fa974cSJacob Faibussowitsch if (PetscDefined(PREFER_ZERO_FOR_MEMZERO)) { 1657*f3fa974cSJacob Faibussowitsch for (size_t i = 0; i < scalar_len; ++i) x[i] = 0; 1658d382aafbSBarry Smith } else { 1659*f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_FORTRAN_FOR_MEMZERO) 1660*f3fa974cSJacob Faibussowitsch fortranzero_(&scalar_len, x); 1661d382aafbSBarry Smith #else 1662*f3fa974cSJacob Faibussowitsch (void)scalar_len; 1663*f3fa974cSJacob Faibussowitsch (void)x; 1664d382aafbSBarry Smith #endif 1665d382aafbSBarry Smith } 1666*f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1667*f3fa974cSJacob Faibussowitsch } 1668*f3fa974cSJacob Faibussowitsch } 1669*f3fa974cSJacob Faibussowitsch #if PetscDefined(PREFER_BZERO) 1670*f3fa974cSJacob Faibussowitsch bzero(a, n); 1671*f3fa974cSJacob Faibussowitsch #else 1672*f3fa974cSJacob Faibussowitsch memset(a, 0, n); 1673*f3fa974cSJacob Faibussowitsch #endif 1674*f3fa974cSJacob Faibussowitsch PetscFunctionReturn(0); 1675d382aafbSBarry Smith } 1676d382aafbSBarry Smith 1677d382aafbSBarry Smith /*MC 1678580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1679580bdb30SBarry Smith 1680580bdb30SBarry Smith Synopsis: 1681580bdb30SBarry Smith #include <petscsys.h> 1682580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1683580bdb30SBarry Smith 1684580bdb30SBarry Smith Not Collective 1685580bdb30SBarry Smith 1686580bdb30SBarry Smith Input Parameters: 1687580bdb30SBarry Smith + str1 - First array 1688580bdb30SBarry Smith . str2 - Second array 1689580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1690580bdb30SBarry Smith 1691580bdb30SBarry Smith Output Parameters: 169287497f52SBarry Smith . e - `PETSC_TRUE` if equal else `PETSC_FALSE`. 1693580bdb30SBarry Smith 1694580bdb30SBarry Smith Level: intermediate 1695580bdb30SBarry Smith 169687497f52SBarry Smith Notes: 169787497f52SBarry Smith This routine is a preferred replacement to `PetscMemcmp()` 169887497f52SBarry Smith 1699580bdb30SBarry Smith The arrays must be of the same type 1700580bdb30SBarry Smith 1701db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, 1702db781477SPatrick Sanan `PetscArraymove()` 1703580bdb30SBarry Smith M*/ 1704*f3fa974cSJacob Faibussowitsch #define PetscArraycmp(str1, str2, cnt, e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp((str1), (str2), (size_t)(cnt) * sizeof(*(str1)), (e))) 1705580bdb30SBarry Smith 17068f8f2f0dSBarry Smith /*MC 170787497f52SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use `PetscArraycpy()` when the arrays 1708580bdb30SBarry Smith do not overlap 1709580bdb30SBarry Smith 1710580bdb30SBarry Smith Synopsis: 1711580bdb30SBarry Smith #include <petscsys.h> 1712580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1713580bdb30SBarry Smith 1714580bdb30SBarry Smith Not Collective 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith Input Parameters: 1717580bdb30SBarry Smith + str1 - First array 1718580bdb30SBarry Smith . str2 - Second array 1719580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1720580bdb30SBarry Smith 1721580bdb30SBarry Smith Level: intermediate 1722580bdb30SBarry Smith 172387497f52SBarry Smith Notes: 172487497f52SBarry Smith This routine is a preferred replacement to `PetscMemmove()` 172587497f52SBarry Smith 1726580bdb30SBarry Smith The arrays must be of the same type 1727580bdb30SBarry Smith 1728db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1729580bdb30SBarry Smith M*/ 1730*f3fa974cSJacob Faibussowitsch #define PetscArraymove(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove((str1), (str2), (size_t)(cnt) * sizeof(*(str1)))) 1731580bdb30SBarry Smith 17328f8f2f0dSBarry Smith /*MC 1733580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1734580bdb30SBarry Smith 1735580bdb30SBarry Smith Synopsis: 1736580bdb30SBarry Smith #include <petscsys.h> 1737580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1738580bdb30SBarry Smith 1739580bdb30SBarry Smith Not Collective 1740580bdb30SBarry Smith 1741580bdb30SBarry Smith Input Parameters: 1742de25709eSStefano Zampini + str1 - First array (destination) 1743de25709eSStefano Zampini . str2 - Second array (source) 1744580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1745580bdb30SBarry Smith 1746580bdb30SBarry Smith Level: intermediate 1747580bdb30SBarry Smith 174887497f52SBarry Smith Notes: 174987497f52SBarry Smith This routine is a preferred replacement to `PetscMemcpy()` 175087497f52SBarry Smith 1751580bdb30SBarry Smith The arrays must be of the same type 1752580bdb30SBarry Smith 1753db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscArrayzero()`, `PetscMemzero()`, `PetscArraymove()`, `PetscMemmove()`, `PetscArraycmp()`, `PetscStrallocpy()` 1754580bdb30SBarry Smith M*/ 1755*f3fa974cSJacob Faibussowitsch #define PetscArraycpy(str1, str2, cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy((str1), (str2), (size_t)(cnt) * sizeof(*(str1)))) 1756580bdb30SBarry Smith 17578f8f2f0dSBarry Smith /*MC 1758580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1759580bdb30SBarry Smith 1760580bdb30SBarry Smith Synopsis: 1761580bdb30SBarry Smith #include <petscsys.h> 1762580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1763580bdb30SBarry Smith 1764580bdb30SBarry Smith Not Collective 1765580bdb30SBarry Smith 1766580bdb30SBarry Smith Input Parameters: 1767580bdb30SBarry Smith + str1 - array 1768580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1769580bdb30SBarry Smith 1770580bdb30SBarry Smith Level: intermediate 1771580bdb30SBarry Smith 1772580bdb30SBarry Smith Note: 177387497f52SBarry Smith This routine is a preferred replacement to `PetscMemzero()` 1774580bdb30SBarry Smith 1775db781477SPatrick Sanan .seealso: `PetscMemcpy()`, `PetscMemcmp()`, `PetscMemzero()`, `PetscArraycmp()`, `PetscArraycpy()`, `PetscMemmove()`, `PetscStrallocpy()`, `PetscArraymove()` 1776580bdb30SBarry Smith M*/ 1777*f3fa974cSJacob Faibussowitsch #define PetscArrayzero(str1, cnt) PetscMemzero((str1), (size_t)(cnt) * sizeof(*(str1))) 1778580bdb30SBarry Smith 1779447bcd8fSJacob Faibussowitsch #if defined(PETSC_CLANG_STATIC_ANALYZER) 1780447bcd8fSJacob Faibussowitsch #define PetscPrefetchBlock(a, b, c, d) 1781447bcd8fSJacob Faibussowitsch #else 1782d382aafbSBarry Smith /*MC 1783d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1784d382aafbSBarry Smith 1785eca87e8dSBarry Smith Synopsis: 1786aaa7dc30SBarry Smith #include <petscsys.h> 1787eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1788eca87e8dSBarry Smith 1789d382aafbSBarry Smith Not Collective 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith Input Parameters: 1792d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1793d382aafbSBarry Smith . n - number of elements to fetch 1794d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 179550d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1796d382aafbSBarry Smith 1797d382aafbSBarry Smith Level: developer 1798d382aafbSBarry Smith 1799d382aafbSBarry Smith Notes: 1800d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1801d382aafbSBarry Smith 180250d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 180350d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 180487497f52SBarry Smith + `PETSC_PREFETCH_HINT_NTA` - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 180587497f52SBarry Smith . `PETSC_PREFETCH_HINT_T0` - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 180687497f52SBarry Smith . `PETSC_PREFETCH_HINT_T1` - Fetch to level 2 and higher (not L1). 180787497f52SBarry Smith - `PETSC_PREFETCH_HINT_T2` - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1808d382aafbSBarry Smith 1809d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1810d382aafbSBarry Smith address). 1811d382aafbSBarry Smith 1812d382aafbSBarry Smith M*/ 18139371c9d4SSatish Balay #define PetscPrefetchBlock(a, n, rw, t) \ 18149371c9d4SSatish Balay do { \ 1815d382aafbSBarry Smith const char *_p = (const char *)(a), *_end = (const char *)((a) + (n)); \ 1816d382aafbSBarry Smith for (; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p, (rw), (t)); \ 1817d382aafbSBarry Smith } while (0) 1818447bcd8fSJacob Faibussowitsch #endif 1819d382aafbSBarry Smith /* 1820d382aafbSBarry Smith Determine if some of the kernel computation routines use 1821d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1822d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1823d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1824e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1825d382aafbSBarry Smith */ 1826d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1827d382aafbSBarry Smith 1828d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1829d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1830d382aafbSBarry Smith #endif 1831d382aafbSBarry Smith 18325a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18335a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1834d382aafbSBarry Smith #endif 1835d382aafbSBarry Smith 1836d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1837d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1838d382aafbSBarry Smith #endif 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1841d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1842d382aafbSBarry Smith #endif 1843d382aafbSBarry Smith 1844d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1845d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1846d382aafbSBarry Smith #endif 1847d382aafbSBarry Smith 1848d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1849d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1850d382aafbSBarry Smith #endif 1851d382aafbSBarry Smith 1852d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1853d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1854d382aafbSBarry Smith #endif 1855d382aafbSBarry Smith 1856d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1857d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1858d382aafbSBarry Smith #endif 1859d382aafbSBarry Smith 1860d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1861d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1862d382aafbSBarry Smith #endif 1863d382aafbSBarry Smith 1864d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1865d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1866d382aafbSBarry Smith #endif 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1869d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1870d382aafbSBarry Smith #endif 1871d382aafbSBarry Smith 1872d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1873d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1874d382aafbSBarry Smith #endif 1875d382aafbSBarry Smith 1876d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1877d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1878d382aafbSBarry Smith #endif 1879d382aafbSBarry Smith 1880d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1881d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1882d382aafbSBarry Smith #endif 1883d382aafbSBarry Smith 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 1886d382aafbSBarry Smith /* 1887d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1888d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1889d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1890d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1891d382aafbSBarry Smith ugly extern "C" {} wrappers. 1892d382aafbSBarry Smith */ 1893d382aafbSBarry Smith #if defined(__cplusplus) 1894d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1895d382aafbSBarry Smith #define EXTERN_C_END } 1896d382aafbSBarry Smith #else 1897d382aafbSBarry Smith #define EXTERN_C_BEGIN 1898d382aafbSBarry Smith #define EXTERN_C_END 1899d382aafbSBarry Smith #endif 1900d382aafbSBarry Smith 1901d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1902d382aafbSBarry Smith 1903d382aafbSBarry Smith /*MC 1904d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1905d382aafbSBarry Smith communication 1906d382aafbSBarry Smith 1907d382aafbSBarry Smith Level: beginner 1908d382aafbSBarry Smith 1909d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1910d382aafbSBarry Smith 1911db781477SPatrick Sanan .seealso: `PETSC_COMM_WORLD`, `PETSC_COMM_SELF` 1912d382aafbSBarry Smith M*/ 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 191593d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 191693d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(2, 4); 191793d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 191893d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 191993d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 192093d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File, MPI_Offset, void *, PetscMPIInt, MPI_Datatype, MPI_Status *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(3, 5); 1921d382aafbSBarry Smith #endif 1922d382aafbSBarry Smith 1923*f3fa974cSJacob Faibussowitsch enum { 1924d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1925*f3fa974cSJacob Faibussowitsch PETSC_MPI_INT_MAX = 2147483647, 1926*f3fa974cSJacob Faibussowitsch PETSC_MPI_INT_MIN = -2147483647, 1927d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1928*f3fa974cSJacob Faibussowitsch PETSC_BLAS_INT_MAX = 2147483647, 1929*f3fa974cSJacob Faibussowitsch PETSC_BLAS_INT_MIN = -2147483647, 1930*f3fa974cSJacob Faibussowitsch PETSC_CUBLAS_INT_MAX = 2147483647, 1931*f3fa974cSJacob Faibussowitsch PETSC_HIPBLAS_INT_MAX = 2147483647 1932*f3fa974cSJacob Faibussowitsch }; 1933d382aafbSBarry Smith 193461b0d812SBarry Smith /*@C 193587497f52SBarry Smith PetscIntCast - casts a `PetscInt64` (which is 64 bits in size) to a `PetscInt` (which may be 32 bits in size), generates an 193687497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1937c73702f5SBarry Smith 1938c73702f5SBarry Smith Not Collective 1939c73702f5SBarry Smith 1940c73702f5SBarry Smith Input Parameter: 194187497f52SBarry Smith . a - the `PetscInt64` value 1942c73702f5SBarry Smith 1943c73702f5SBarry Smith Output Parameter: 194487497f52SBarry Smith . b - the resulting `PetscInt` value 1945c73702f5SBarry Smith 1946c73702f5SBarry Smith Level: advanced 1947c73702f5SBarry Smith 194887497f52SBarry Smith Notes: 194987497f52SBarry Smith If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make `PetscInt` use 64 bit ints 1950c73702f5SBarry Smith 1951c73702f5SBarry Smith Not available from Fortran 1952c73702f5SBarry Smith 1953db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()` 1954c73702f5SBarry Smith @*/ 1955d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntCast(PetscInt64 a, PetscInt *b) 1956d71ae5a4SJacob Faibussowitsch { 1957c73702f5SBarry Smith PetscFunctionBegin; 19583ca90d2dSJacob Faibussowitsch *b = 0; 1959*f3fa974cSJacob Faibussowitsch // if using 64-bit indices already then this comparison is tautologically true 1960*f3fa974cSJacob Faibussowitsch PetscCheck(a < PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt64_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1961*f3fa974cSJacob Faibussowitsch *b = (PetscInt)a; 1962c73702f5SBarry Smith PetscFunctionReturn(0); 1963c73702f5SBarry Smith } 1964c73702f5SBarry Smith 1965c73702f5SBarry Smith /*@C 196687497f52SBarry Smith PetscCountCast - casts a `PetscCount` to a `PetscInt` (which may be 32 bits in size), generates an 196787497f52SBarry Smith error if the `PetscInt` is not large enough to hold the number. 1968981bb840SJunchao Zhang 1969981bb840SJunchao Zhang Not Collective 1970981bb840SJunchao Zhang 1971981bb840SJunchao Zhang Input Parameter: 197287497f52SBarry Smith . a - the `PetscCount` value 1973981bb840SJunchao Zhang 1974981bb840SJunchao Zhang Output Parameter: 197587497f52SBarry Smith . b - the resulting `PetscInt` value 1976981bb840SJunchao Zhang 1977981bb840SJunchao Zhang Level: advanced 1978981bb840SJunchao Zhang 1979981bb840SJunchao Zhang Notes: 1980981bb840SJunchao Zhang If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1981981bb840SJunchao Zhang 1982981bb840SJunchao Zhang Not available from Fortran 1983981bb840SJunchao Zhang 1984db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscBLASIntCast()`, `PetscIntMultError()`, `PetscIntSumError()`, `PetscIntCast()` 1985981bb840SJunchao Zhang @*/ 1986d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCountCast(PetscCount a, PetscInt *b) 1987d71ae5a4SJacob Faibussowitsch { 1988981bb840SJunchao Zhang PetscFunctionBegin; 1989981bb840SJunchao Zhang *b = 0; 1990*f3fa974cSJacob Faibussowitsch PetscCheck(sizeof(PetscCount) <= sizeof(PetscInt) || a <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscCount_FMT " is too big for PetscInt, you may need to ./configure using --with-64-bit-indices", a); 1991*f3fa974cSJacob Faibussowitsch *b = (PetscInt)a; 1992981bb840SJunchao Zhang PetscFunctionReturn(0); 1993981bb840SJunchao Zhang } 1994981bb840SJunchao Zhang 1995981bb840SJunchao Zhang /*@C 199687497f52SBarry Smith PetscBLASIntCast - casts a `PetscInt` (which may be 64 bits in size) to a `PetscBLASInt` (which may be 32 bits in size), generates an 199787497f52SBarry Smith error if the `PetscBLASInt` is not large enough to hold the number. 199861b0d812SBarry Smith 199961b0d812SBarry Smith Not Collective 200061b0d812SBarry Smith 200161b0d812SBarry Smith Input Parameter: 200287497f52SBarry Smith . a - the `PetscInt` value 200361b0d812SBarry Smith 200461b0d812SBarry Smith Output Parameter: 200587497f52SBarry Smith . b - the resulting `PetscBLASInt` value 200661b0d812SBarry Smith 200761b0d812SBarry Smith Level: advanced 200861b0d812SBarry Smith 20090bc7d38cSBarry Smith Notes: 20101fd49c25SBarry Smith Not available from Fortran 201187497f52SBarry Smith 2012f0b7f91aSBarry Smith Errors if the integer is negative since PETSc calls to BLAS/LAPACK never need to cast negative integer inputs 20131fd49c25SBarry Smith 2014db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscMPIIntCast()`, `PetscIntCast()`, `PetscCountCast()` 201561b0d812SBarry Smith @*/ 2016d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscBLASIntCast(PetscInt a, PetscBLASInt *b) 2017d71ae5a4SJacob Faibussowitsch { 2018c5df96a5SBarry Smith PetscFunctionBegin; 201954c59aa7SJacob Faibussowitsch *b = 0; 202054c59aa7SJacob Faibussowitsch if (PetscDefined(USE_64BIT_INDICES) && !PetscDefined(HAVE_64BIT_BLAS_INDICES)) { 202154c59aa7SJacob Faibussowitsch PetscCheck(a <= PETSC_BLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for BLAS/LAPACK, which is restricted to 32 bit integers. Either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-blas-indices for the case you are running", a); 202254c59aa7SJacob Faibussowitsch } 202354c59aa7SJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer to BLAS/LAPACK routine"); 2024*f3fa974cSJacob Faibussowitsch *b = (PetscBLASInt)a; 2025c5df96a5SBarry Smith PetscFunctionReturn(0); 2026c5df96a5SBarry Smith } 2027c5df96a5SBarry Smith 202861b0d812SBarry Smith /*@C 202987497f52SBarry Smith PetscCuBLASIntCast - like `PetscBLASIntCast()`, but for `PetscCuBLASInt`. 2030eee0c0a6SToby Isaac 2031eee0c0a6SToby Isaac Not Collective 2032eee0c0a6SToby Isaac 2033eee0c0a6SToby Isaac Input Parameter: 203487497f52SBarry Smith . a - the `PetscInt` value 2035eee0c0a6SToby Isaac 2036eee0c0a6SToby Isaac Output Parameter: 203787497f52SBarry Smith . b - the resulting `PetscCuBLASInt` value 2038eee0c0a6SToby Isaac 2039eee0c0a6SToby Isaac Level: advanced 2040eee0c0a6SToby Isaac 2041eee0c0a6SToby Isaac Notes: 2042eee0c0a6SToby Isaac Errors if the integer is negative since PETSc calls to cuBLAS and friends never need to cast negative integer inputs 2043eee0c0a6SToby Isaac 2044db781477SPatrick Sanan .seealso: `PetscCuBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 2045eee0c0a6SToby Isaac @*/ 2046d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCuBLASIntCast(PetscInt a, PetscCuBLASInt *b) 2047d71ae5a4SJacob Faibussowitsch { 2048eee0c0a6SToby Isaac PetscFunctionBegin; 204954c59aa7SJacob Faibussowitsch *b = 0; 2050*f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_CUBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for cuBLAS, which is restricted to 32 bit integers.", a); 2051*f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to cuBLAS routine", a); 2052*f3fa974cSJacob Faibussowitsch *b = (PetscCuBLASInt)a; 2053eee0c0a6SToby Isaac PetscFunctionReturn(0); 2054eee0c0a6SToby Isaac } 2055eee0c0a6SToby Isaac 2056eee0c0a6SToby Isaac /*@C 205747d993e7Ssuyashtn PetscHipBLASIntCast - like `PetscBLASIntCast()`, but for `PetscHipBLASInt`. 205847d993e7Ssuyashtn 205947d993e7Ssuyashtn Not Collective 206047d993e7Ssuyashtn 206147d993e7Ssuyashtn Input Parameter: 206247d993e7Ssuyashtn . a - the `PetscInt` value 206347d993e7Ssuyashtn 206447d993e7Ssuyashtn Output Parameter: 206547d993e7Ssuyashtn . b - the resulting `PetscHipBLASInt` value 206647d993e7Ssuyashtn 206747d993e7Ssuyashtn Level: advanced 206847d993e7Ssuyashtn 206947d993e7Ssuyashtn Notes: 207047d993e7Ssuyashtn Errors if the integer is negative since PETSc calls to hipBLAS and friends never need to cast negative integer inputs 207147d993e7Ssuyashtn 207247d993e7Ssuyashtn .seealso: `PetscHipBLASInt`, `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscMPIIntCast()`, `PetscIntCast()` 207347d993e7Ssuyashtn @*/ 207447d993e7Ssuyashtn static inline PetscErrorCode PetscHipBLASIntCast(PetscInt a, PetscHipBLASInt *b) 207547d993e7Ssuyashtn { 207647d993e7Ssuyashtn PetscFunctionBegin; 207747d993e7Ssuyashtn *b = 0; 2078*f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_HIPBLAS_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for hipBLAS, which is restricted to 32 bit integers.", a); 2079*f3fa974cSJacob Faibussowitsch PetscCheck(a >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Passing negative integer %" PetscInt_FMT "to hipBLAS routine", a); 2080*f3fa974cSJacob Faibussowitsch *b = (PetscHipBLASInt)a; 208147d993e7Ssuyashtn PetscFunctionReturn(0); 208247d993e7Ssuyashtn } 208347d993e7Ssuyashtn 208447d993e7Ssuyashtn /*@C 208547d993e7Ssuyashtn PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 208647d993e7Ssuyashtn error if the PetscMPIInt is not large enough to hold the number. 208761b0d812SBarry Smith 208861b0d812SBarry Smith Not Collective 208961b0d812SBarry Smith 209061b0d812SBarry Smith Input Parameter: 209187497f52SBarry Smith . a - the `PetscInt` value 209261b0d812SBarry Smith 209361b0d812SBarry Smith Output Parameter: 209487497f52SBarry Smith . b - the resulting `PetscMPIInt` value 209561b0d812SBarry Smith 209661b0d812SBarry Smith Level: advanced 209761b0d812SBarry Smith 20981fd49c25SBarry Smith Not available from Fortran 20991fd49c25SBarry Smith 2100db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntCast()` 210161b0d812SBarry Smith @*/ 2102d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscMPIIntCast(PetscInt a, PetscMPIInt *b) 2103d71ae5a4SJacob Faibussowitsch { 21044dc2109aSBarry Smith PetscFunctionBegin; 210554c59aa7SJacob Faibussowitsch *b = 0; 2106*f3fa974cSJacob Faibussowitsch PetscCheck(a <= PETSC_MPI_INT_MAX, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "%" PetscInt_FMT " is too big for MPI buffer length. Maximum supported value is %d", a, PETSC_MPI_INT_MAX); 2107*f3fa974cSJacob Faibussowitsch *b = (PetscMPIInt)a; 21084dc2109aSBarry Smith PetscFunctionReturn(0); 21094dc2109aSBarry Smith } 21104dc2109aSBarry Smith 2111*f3fa974cSJacob Faibussowitsch #define PetscInt64Mult(a, b) (((PetscInt64)(a)) * ((PetscInt64)(b))) 21122f18eb33SBarry Smith 21132f18eb33SBarry Smith /*@C 2114*f3fa974cSJacob Faibussowitsch PetscRealIntMultTruncate - Computes the product of a positive `PetscReal` and a positive 2115*f3fa974cSJacob Faibussowitsch `PetscInt` and truncates the value to slightly less than the maximal possible value. 21162f18eb33SBarry Smith 2117*f3fa974cSJacob Faibussowitsch Not Collective, Not available from Fortran 21182f18eb33SBarry Smith 2119d8d19677SJose E. Roman Input Parameters: 2120*f3fa974cSJacob Faibussowitsch + a - The `PetscReal` value 2121*f3fa974cSJacob Faibussowitsch - b - The `PetscInt` value 21222f18eb33SBarry Smith 2123*f3fa974cSJacob Faibussowitsch Notes: 2124*f3fa974cSJacob Faibussowitsch Returns the result as a `PetscInt` value. 21252f18eb33SBarry Smith 2126*f3fa974cSJacob Faibussowitsch Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64`. 2127*f3fa974cSJacob Faibussowitsch Use `PetscIntMultTruncate()` to compute the product of two positive `PetscInt` and truncate 2128*f3fa974cSJacob Faibussowitsch to fit a `PetscInt`. 2129*f3fa974cSJacob Faibussowitsch Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an 2130*f3fa974cSJacob Faibussowitsch error if the result will not fit in a `PetscInt`. 21312f18eb33SBarry Smith 2132e28ce29aSPatrick Sanan Developers Note: 2133*f3fa974cSJacob Faibussowitsch We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but 2134*f3fa974cSJacob Faibussowitsch requires many more checks. 21352f18eb33SBarry Smith 2136*f3fa974cSJacob Faibussowitsch This is used where we compute approximate sizes for workspace and need to insure the 2137*f3fa974cSJacob Faibussowitsch workspace is index-able. 21381fd49c25SBarry Smith 21392f18eb33SBarry Smith Level: advanced 21402f18eb33SBarry Smith 2141*f3fa974cSJacob Faibussowitsch .seealso: `PetscReal`, `PetscInt`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21422f18eb33SBarry Smith @*/ 2143d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscRealIntMultTruncate(PetscReal a, PetscInt b) 2144d71ae5a4SJacob Faibussowitsch { 21455f80ce2aSJacob Faibussowitsch PetscInt64 r = (PetscInt64)(a * (PetscReal)b); 21462f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21472f18eb33SBarry Smith return (PetscInt)r; 21482f18eb33SBarry Smith } 21492f18eb33SBarry Smith 21502f18eb33SBarry Smith /*@C 21512f18eb33SBarry Smith 215287497f52SBarry Smith PetscIntMultTruncate - Computes the product of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 21532f18eb33SBarry Smith 21542f18eb33SBarry Smith Not Collective 21552f18eb33SBarry Smith 2156d8d19677SJose E. Roman Input Parameters: 21572f18eb33SBarry Smith + a - the PetscInt value 21582f18eb33SBarry Smith - b - the second value 21592f18eb33SBarry Smith 2160390e1bf2SBarry Smith Returns: 216187497f52SBarry Smith the result as a `PetscInt` value 21622f18eb33SBarry Smith 216387497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 216487497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 216587497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 21662f18eb33SBarry Smith 21671fd49c25SBarry Smith Not available from Fortran 21681fd49c25SBarry Smith 216987497f52SBarry Smith Developers Note: 217087497f52SBarry Smith We currently assume that `PetscInt` addition can never overflow, this is obviously wrong but requires many more checks. 21712f18eb33SBarry Smith 21722f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21732f18eb33SBarry Smith 21742f18eb33SBarry Smith Level: advanced 21752f18eb33SBarry Smith 2176db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()`, `PetscIntSumError()` 21772f18eb33SBarry Smith @*/ 2178d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntMultTruncate(PetscInt a, PetscInt b) 2179d71ae5a4SJacob Faibussowitsch { 21805f80ce2aSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 21812f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21822f18eb33SBarry Smith return (PetscInt)r; 21832f18eb33SBarry Smith } 21842f18eb33SBarry Smith 2185f91af8c7SBarry Smith /*@C 2186f91af8c7SBarry Smith 218787497f52SBarry Smith PetscIntSumTruncate - Computes the sum of two positive `PetscInt` and truncates the value to slightly less than the maximal possible value 2188f91af8c7SBarry Smith 2189f91af8c7SBarry Smith Not Collective 2190f91af8c7SBarry Smith 2191d8d19677SJose E. Roman Input Parameters: 219287497f52SBarry Smith + a - the `PetscInt` value 2193f91af8c7SBarry Smith - b - the second value 2194f91af8c7SBarry Smith 2195390e1bf2SBarry Smith Returns: 219687497f52SBarry Smith the result as a `PetscInt` value 2197f91af8c7SBarry Smith 219887497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` as a `PetscInt64` 219987497f52SBarry Smith Use `PetscRealIntMultTruncate()` to compute the product of a `PetscReal` and a `PetscInt` and truncate to fit a `PetscInt` 220087497f52SBarry Smith Use `PetscIntMultError()` to compute the product of two `PetscInt` if you wish to generate an error if the result will not fit in a `PetscInt` 2201f91af8c7SBarry Smith 2202f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2203f91af8c7SBarry Smith 2204f5f57ec0SBarry Smith Not available from Fortran 2205f5f57ec0SBarry Smith 2206f91af8c7SBarry Smith Level: advanced 2207f91af8c7SBarry Smith 2208db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2209f91af8c7SBarry Smith @*/ 2210d71ae5a4SJacob Faibussowitsch static inline PetscInt PetscIntSumTruncate(PetscInt a, PetscInt b) 2211d71ae5a4SJacob Faibussowitsch { 22125f80ce2aSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2213f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2214f91af8c7SBarry Smith return (PetscInt)r; 2215f91af8c7SBarry Smith } 2216f91af8c7SBarry Smith 22172f18eb33SBarry Smith /*@C 22182f18eb33SBarry Smith 221987497f52SBarry Smith PetscIntMultError - Computes the product of two positive `PetscInt` and generates an error with overflow. 22202f18eb33SBarry Smith 22212f18eb33SBarry Smith Not Collective 22222f18eb33SBarry Smith 2223d8d19677SJose E. Roman Input Parameters: 222487497f52SBarry Smith + a - the `PetscInt` value 22252f18eb33SBarry Smith - b - the second value 22262f18eb33SBarry Smith 2227d8d19677SJose E. Roman Output Parameter: 222887497f52SBarry Smith . result - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 22292f18eb33SBarry Smith 223087497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two `PetscInt` and store in a `PetscInt64` 223187497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 22322f18eb33SBarry Smith 2233f5f57ec0SBarry Smith Not available from Fortran 2234f5f57ec0SBarry Smith 223587497f52SBarry Smith Developers Note: 223687497f52SBarry Smith We currently assume that `PetscInt` addition does not overflow, this is obviously wrong but requires many more checks. 22372f18eb33SBarry Smith 22382f18eb33SBarry Smith Level: advanced 22392f18eb33SBarry Smith 2240db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscIntMult64()`, `PetscIntSumError()` 22412f18eb33SBarry Smith @*/ 2242d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntMultError(PetscInt a, PetscInt b, PetscInt *result) 2243d71ae5a4SJacob Faibussowitsch { 2244*f3fa974cSJacob Faibussowitsch PetscInt64 r = PetscInt64Mult(a, b); 22452f18eb33SBarry Smith 22462f18eb33SBarry Smith PetscFunctionBegin; 2247*f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 2248*f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Product of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2249*f3fa974cSJacob Faibussowitsch } 2250f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 2251f91af8c7SBarry Smith PetscFunctionReturn(0); 2252f91af8c7SBarry Smith } 2253f91af8c7SBarry Smith 2254f91af8c7SBarry Smith /*@C 2255f91af8c7SBarry Smith 225687497f52SBarry Smith PetscIntSumError - Computes the sum of two positive `PetscInt` and generates an error with overflow. 2257f91af8c7SBarry Smith 2258f91af8c7SBarry Smith Not Collective 2259f91af8c7SBarry Smith 2260d8d19677SJose E. Roman Input Parameters: 226187497f52SBarry Smith + a - the `PetscInt` value 2262f91af8c7SBarry Smith - b - the second value 2263f91af8c7SBarry Smith 2264d8d19677SJose E. Roman Output Parameter: 226587497f52SBarry Smith . c - the result as a `PetscInt` value, or NULL if you do not want the result, you just want to check if it overflows 2266f91af8c7SBarry Smith 226787497f52SBarry Smith Use `PetscInt64Mult()` to compute the product of two 32 bit PetscInt and store in a `PetscInt64` 226887497f52SBarry Smith Use `PetscIntMultTruncate()` to compute the product of two `PetscInt` and truncate it to fit in a `PetscInt` 2269f91af8c7SBarry Smith 2270f5f57ec0SBarry Smith Not available from Fortran 2271f5f57ec0SBarry Smith 2272f91af8c7SBarry Smith Level: advanced 2273f91af8c7SBarry Smith 2274db781477SPatrick Sanan .seealso: `PetscBLASInt`, `PetscMPIInt`, `PetscInt`, `PetscBLASIntCast()`, `PetscInt64Mult()`, `PetscIntMultError()` 2275f91af8c7SBarry Smith @*/ 2276d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscIntSumError(PetscInt a, PetscInt b, PetscInt *result) 2277d71ae5a4SJacob Faibussowitsch { 2278*f3fa974cSJacob Faibussowitsch PetscInt64 r = ((PetscInt64)a) + ((PetscInt64)b); 2279f91af8c7SBarry Smith 2280f91af8c7SBarry Smith PetscFunctionBegin; 2281*f3fa974cSJacob Faibussowitsch if (!PetscDefined(USE_64BIT_INDICES)) { 2282*f3fa974cSJacob Faibussowitsch PetscCheck(r <= PETSC_MAX_INT, PETSC_COMM_SELF, PETSC_ERR_SUP, "Sum of two integers %" PetscInt_FMT " %" PetscInt_FMT " overflow, either you have an invalidly large integer error in your code or you must ./configure PETSc with --with-64-bit-indices for the case you are running", a, b); 2283*f3fa974cSJacob Faibussowitsch } 2284f91af8c7SBarry Smith if (result) *result = (PetscInt)r; 22852f18eb33SBarry Smith PetscFunctionReturn(0); 22862f18eb33SBarry Smith } 2287c5df96a5SBarry Smith 2288d382aafbSBarry Smith /* 22892981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2290d382aafbSBarry Smith */ 2291d382aafbSBarry Smith #if defined(hz) 2292d382aafbSBarry Smith #undef hz 2293d382aafbSBarry Smith #endif 2294d382aafbSBarry Smith 229515a5570dSLisandro Dalcin #include <limits.h> 229615a5570dSLisandro Dalcin 229715a5570dSLisandro Dalcin /* The number of bits in a byte */ 229815a5570dSLisandro Dalcin 229915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 230015a5570dSLisandro Dalcin 2301d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2302d382aafbSBarry Smith #include <sys/types.h> 2303d382aafbSBarry Smith #endif 2304d382aafbSBarry Smith 2305d382aafbSBarry Smith /*MC 2306d382aafbSBarry Smith 230766d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 230866d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 230966d79e26SBarry Smith 23106274ba02SSatish Balay The current PETSc version and the API for accessing it are defined in <A HREF="PETSC_DOC_OUT_ROOT_PLACEHOLDER/include/petscversion.h.html">include/petscverson.html</A> 231166d79e26SBarry Smith 231266d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 231366d79e26SBarry Smith 231466d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 231566d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 231666d79e26SBarry Smith 231766d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 231866d79e26SBarry Smith 231966d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 232066d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 232166d79e26SBarry Smith version number (x.y.z). 232266d79e26SBarry Smith 232387497f52SBarry Smith `PETSC_RELEASE_DATE` is the date the x.y version was released (i.e. the version before any patch releases) 232466d79e26SBarry Smith 232587497f52SBarry Smith `PETSC_VERSION_DATE` is the date the x.y.z version was released 232666d79e26SBarry Smith 232787497f52SBarry Smith `PETSC_VERSION_GIT` is the last git commit to the repository given in the form vx.y.z-wwwww 232866d79e26SBarry Smith 232987497f52SBarry Smith `PETSC_VERSION_DATE_GIT` is the date of the last git commit to the repository 233066d79e26SBarry Smith 233187497f52SBarry Smith `PETSC_VERSION_()` is deprecated and will eventually be removed. 233266d79e26SBarry Smith 2333cbc12506SBarry Smith Level: intermediate 233466d79e26SBarry Smith 233566d79e26SBarry Smith M*/ 233666d79e26SBarry Smith 2337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[], size_t); 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[], size_t); 2339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[], size_t); 2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[], size_t); 2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[], size_t); 234327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 23445f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt *, PetscInt *, PetscInt *, PetscInt *); 2345d382aafbSBarry Smith 23466a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt, const PetscInt[], PetscBool *); 234762e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortedInt64(PetscInt, const PetscInt64[], PetscBool *); 23486a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt, const PetscMPIInt[], PetscBool *); 23496a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt, const PetscReal[], PetscBool *); 2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt, PetscInt[]); 235162e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortInt64(PetscInt, PetscInt64[]); 235262e5d2d2SJDBetteridge PETSC_EXTERN PetscErrorCode PetscSortCount(PetscInt, PetscCount[]); 2353ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt, PetscInt[]); 235422ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt *, PetscInt[]); 2355b6a18d21SVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt *, PetscInt[]); 2357f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt, const PetscInt[], PetscBool *); 235860e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt *); 2359d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt *); 2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt, const PetscInt[], PetscInt[]); 2361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt, const char *[], PetscInt[]); 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt, PetscInt[], PetscInt[]); 2363981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithCountArray(PetscCount, PetscInt[], PetscCount[]); 23646c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt, PetscInt[], PetscInt[], PetscInt[]); 2365981bb840SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortIntWithIntCountArrayPair(PetscCount, PetscInt[], PetscInt[], PetscCount[]); 236617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt, PetscMPIInt[]); 236717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt *, PetscMPIInt[]); 2368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt, PetscMPIInt[], PetscMPIInt[]); 23695569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt, PetscMPIInt[], PetscInt[]); 2370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt, PetscInt[], PetscScalar[]); 237117df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt, PetscInt[], void *, size_t, void *); 2372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt, PetscReal[]); 237339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2374014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt, const PetscReal[], PetscInt[]); 2375745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt *, PetscReal[]); 237639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal, PetscInt, const PetscReal[], PetscReal, PetscInt *); 2377014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt, PetscInt, PetscScalar[], PetscInt[]); 2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt, PetscInt, PetscReal[], PetscInt[]); 2379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt, const PetscBool[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **, PetscInt **, PetscInt **); 23806c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt, const PetscInt[], const PetscInt[], PetscInt, const PetscInt[], const PetscInt[], PetscInt *, PetscInt **, PetscInt **); 23816c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscInt *, PetscInt **); 2382e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt, const PetscMPIInt[], PetscInt, const PetscMPIInt[], PetscInt *, PetscMPIInt **); 2383ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2384ce605777SToby Isaac 23854d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSort(PetscInt, void *, size_t, int (*)(const void *, const void *, void *), void *); 2386676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrdered(PetscInt, PetscInt[]); 2387676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrdered(PetscInt, PetscMPIInt[]); 2388676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrdered(PetscInt, PetscReal[]); 23894d3610e3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscTimSortWithArray(PetscInt, void *, size_t, void *, size_t, int (*)(const void *, const void *, void *), void *); 2390676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscIntSortSemiOrderedWithArray(PetscInt, PetscInt[], PetscInt[]); 2391676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscMPIIntSortSemiOrderedWithArray(PetscInt, PetscMPIInt[], PetscMPIInt[]); 2392676f2a66SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscRealSortSemiOrderedWithArrayInt(PetscInt, PetscReal[], PetscInt[]); 2393676f2a66SJacob Faibussowitsch 2394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[], size_t); 2396d382aafbSBarry Smith 239776bdecfbSBarry Smith /*J 2398d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2399d382aafbSBarry Smith 2400d382aafbSBarry Smith Level: beginner 2401d382aafbSBarry Smith 2402e28ce29aSPatrick Sanan Notes: 240387497f52SBarry Smith To use `PETSCSPRNG` or `PETSCRANDOM123` you must have ./configure PETSc 240425ccb61fSToby Isaac with the option --download-sprng or --download-random123 2405d382aafbSBarry Smith 2406db781477SPatrick Sanan .seealso: `PetscRandomSetType()`, `PetscRandom`, `PetscRandomCreate()` 240776bdecfbSBarry Smith J*/ 240819fd82e9SBarry Smith typedef const char *PetscRandomType; 2409d382aafbSBarry Smith #define PETSCRAND "rand" 2410d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2411d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2412c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 241325ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2414808ba619SStefano Zampini #define PETSCCURAND "curand" 2415d382aafbSBarry Smith 2416d382aafbSBarry Smith /* Logging support */ 2417014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2418d382aafbSBarry Smith 2419607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2420d382aafbSBarry Smith 2421d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2422140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2423d382aafbSBarry Smith 2424bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[], PetscErrorCode (*)(PetscRandom)); 242519fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 242719fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType *); 2428fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom, PetscObject, const char[]); 2429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom, PetscViewer); 2430d382aafbSBarry Smith 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm, PetscRandom *); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom, PetscScalar *); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom, PetscReal *); 2434808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValues(PetscRandom, PetscInt, PetscScalar *); 2435808ba619SStefano Zampini PETSC_EXTERN PetscErrorCode PetscRandomGetValuesReal(PetscRandom, PetscInt, PetscReal *); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom, PetscScalar *, PetscScalar *); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom, PetscScalar, PetscScalar); 2438014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom, unsigned long); 2439014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom, unsigned long *); 2440014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2441014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom *); 2442d382aafbSBarry Smith 2443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[], char[], size_t); 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[], char[], size_t); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[], size_t); 2446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[], char[]); 2447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[], size_t); 2448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[], char, PetscBool *); 2449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[], char, PetscBool *); 245097540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24518a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 245297540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2453d382aafbSBarry Smith 2454d71ae5a4SJacob Faibussowitsch static inline PetscBool PetscBinaryBigEndian(void) 2455d71ae5a4SJacob Faibussowitsch { 24569371c9d4SSatish Balay long _petsc_v = 1; 24579371c9d4SSatish Balay return ((char *)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE; 24589371c9d4SSatish Balay } 245930815ce0SLisandro Dalcin 24609860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int, void *, PetscInt, PetscInt *, PetscDataType); 24619860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm, int, void *, PetscInt, PetscInt *, PetscDataType); 2462f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int, const void *, PetscInt, PetscDataType); 2463f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm, int, const void *, PetscInt, PetscDataType); 2464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[], PetscFileMode, int *); 2465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm, PetscBool *); 2467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm, PetscBool *); 2468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm, char[], size_t); 2469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm, const char[], char[], size_t, PetscBool *); 2470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm, const char[], char[], size_t, PetscBool *); 2471c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2472e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[], int, int *); 2473c891a504SStefano Zampini #endif 2474d382aafbSBarry Smith 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int, off_t, PetscBinarySeekType, off_t *); 2476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm, int, off_t, PetscBinarySeekType, off_t *); 2477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *, PetscDataType, PetscInt); 2478d382aafbSBarry Smith 2479014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[], PetscBool); 2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char *); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 24852a2a2941SBarry Smith PETSC_EXTERN PetscErrorCode PetscWaitOnError(void); 2486d382aafbSBarry Smith 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt *); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **); 2489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscMPIInt **, PetscMPIInt **, PetscMPIInt **); 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscInt ***, MPI_Request **); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm, PetscMPIInt, PetscMPIInt, const PetscMPIInt[], const PetscMPIInt[], PetscScalar ***, MPI_Request **); 249293d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt *, const void *, PetscMPIInt *, PetscMPIInt **, void *) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 249393d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 249493d501b3SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm, PetscMPIInt, MPI_Datatype, PetscMPIInt, const PetscMPIInt[], const void *, PetscMPIInt *, PetscMPIInt **, void *, PetscMPIInt, MPI_Request **, MPI_Request **, PetscErrorCode (*send)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, PetscMPIInt, void *, MPI_Request[], void *), PetscErrorCode (*recv)(MPI_Comm, const PetscMPIInt[], PetscMPIInt, void *, MPI_Request[], void *), void *ctx) PETSC_ATTRIBUTE_MPI_POINTER_WITH_TYPE(6, 3); 2495d382aafbSBarry Smith 24966145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24976145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm, PetscBuildTwoSidedType); 24986145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm, PetscBuildTwoSidedType *); 24996145cd65SJed Brown 2500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm, PetscBool *, PetscBool *); 2501d382aafbSBarry Smith 2502ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2503ce94432eSBarry Smith 250445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 250545487dadSJed Brown 2506d382aafbSBarry Smith struct _n_PetscSubcomm { 2507d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2508d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2509306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 251045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 251145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2512708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 251345487dadSJed Brown PetscSubcommType type; 2514e5acf8a4SHong Zhang char *subcommprefix; 2515d382aafbSBarry Smith }; 2516d382aafbSBarry Smith 2517d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommParent(PetscSubcomm scomm) 2518d71ae5a4SJacob Faibussowitsch { 25199371c9d4SSatish Balay return scomm->parent; 25209371c9d4SSatish Balay } 2521d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommChild(PetscSubcomm scomm) 2522d71ae5a4SJacob Faibussowitsch { 25239371c9d4SSatish Balay return scomm->child; 25249371c9d4SSatish Balay } 2525d71ae5a4SJacob Faibussowitsch static inline MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) 2526d71ae5a4SJacob Faibussowitsch { 25279371c9d4SSatish Balay return scomm->dupparent; 25289371c9d4SSatish Balay } 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm, PetscSubcomm *); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm *); 2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm, PetscInt); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm, PetscSubcommType); 253365d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm, PetscMPIInt, PetscMPIInt); 2534053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm, PetscViewer); 2535f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2536e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm, const char[]); 2537a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm, MPI_Comm *); 2538a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm, MPI_Comm *); 2539a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm, MPI_Comm *); 2540d382aafbSBarry Smith 25419962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt, PetscHeap *); 25429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap, PetscInt, PetscInt); 25439962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap, PetscInt *, PetscInt *); 25449962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap, PetscInt *, PetscInt *); 25459962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap, PetscInt, PetscInt); 25469962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25479962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap *); 25489962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap, PetscViewer); 25499962606eSBarry Smith 25505e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25515f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm, PetscShmComm *); 25525f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25535f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm, PetscMPIInt, PetscMPIInt *); 25545f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm, MPI_Comm *); 25555e71baefSBarry Smith 2556a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2557a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm, PetscInt, PetscOmpCtrl *); 2558a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl, MPI_Comm *, MPI_Comm *, PetscBool *); 2559a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl *); 2560a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2561a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2562a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2563a32e93adSJunchao Zhang 256413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t, size_t, PetscSegBuffer *); 25650f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer *); 256613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer, size_t, void *); 2567137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer, void *); 2568137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer, void *); 2569137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer, void *); 257013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer, size_t *); 257113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer, size_t); 25720f453b92SJed Brown 2573471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2574471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2575471ecdacSJed Brown * possible. */ 2576d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg, size_t count, PetscInt *PETSC_RESTRICT *slot) 2577d71ae5a4SJacob Faibussowitsch { 25789371c9d4SSatish Balay return PetscSegBufferGet(seg, count, (void **)slot); 25799371c9d4SSatish Balay } 2580d382aafbSBarry Smith 25819de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 25829de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted *); 25839de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted *); 25849de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted, const char *, const char *, PetscBool *); 25859de0f6ecSBarry Smith 2586ace2fbaeSBarry Smith #include <stdarg.h> 2587ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char *, size_t, const char[], size_t *, va_list); 2588ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE *, const char[], va_list); 2589ace2fbaeSBarry Smith 2590268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2591fbfcfee5SBarry Smith 25921f817a21SBarry Smith /*@C 25931f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 25941f817a21SBarry Smith 259587497f52SBarry Smith Not Collective - only what is registered on rank 0 of `PETSC_COMM_WORLD` will be printed 25961f817a21SBarry Smith 25971f817a21SBarry Smith Input Parameters: 259835cb6cd3SPierre Jolivet + cite - the bibtex item, formatted to displayed on multiple lines nicely 259987497f52SBarry Smith - set - a boolean variable initially set to `PETSC_FALSE`; this is used to insure only a single registration of the citation 26001f817a21SBarry Smith 26013c7db156SBarry Smith Options Database: Key 26023c7db156SBarry Smith . -citations [filename] - print out the bibtex entries for the given computation 26033c7db156SBarry Smith 2604850545d0SSatish Balay Level: intermediate 2605850545d0SSatish Balay 26063c7db156SBarry Smith Fortran Note: 2607f5f57ec0SBarry Smith Not available from Fortran 2608f5f57ec0SBarry Smith 26091f817a21SBarry Smith @*/ 2610d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode PetscCitationsRegister(const char cit[], PetscBool *set) 2611d71ae5a4SJacob Faibussowitsch { 2612dff31646SBarry Smith size_t len; 2613dff31646SBarry Smith char *vstring; 2614dff31646SBarry Smith 26151f817a21SBarry Smith PetscFunctionBegin; 26168d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 26179566063dSJacob Faibussowitsch PetscCall(PetscStrlen(cit, &len)); 26189566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(PetscCitationsList, len, &vstring)); 26199566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(vstring, cit, len)); 2620dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26211f817a21SBarry Smith PetscFunctionReturn(0); 2622dff31646SBarry Smith } 2623dff31646SBarry Smith 2624d8174014SToby Isaac PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Google has discontinued its URL shortener service") PetscErrorCode PetscURLShorten(const char[], char[], size_t c); 2625fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm, char[], char[], size_t); 2626fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm, const char[], char[], size_t); 2627f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm, const char[], const char[]); 2628fe278a28SBarry Smith 2629f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm, char[], char[], size_t); 2630f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm, const char[], char[], char[], size_t); 2631b967cddfSBarry Smith 26329f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm, const char[], char[], size_t); 26339f4d3c52SBarry Smith 263404102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm, const char[], const char[], PetscBool *); 2635763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm, const char[], const char[], PetscBool *); 2636dff31646SBarry Smith 263768e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[], const char[], char[], size_t, PetscBool *); 26385dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[], const char[], const char[], size_t); 2639d382aafbSBarry Smith 2640b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2641d71ae5a4SJacob Faibussowitsch static inline unsigned int PetscStrHash(const char *str) 2642d71ae5a4SJacob Faibussowitsch { 2643df05ca09SBarry Smith unsigned int c, hash = 5381; 2644df05ca09SBarry Smith 2645503e1a2cSLisandro Dalcin while ((c = (unsigned int)*str++)) hash = ((hash << 5) + hash) + c; /* hash * 33 + c */ 2646df05ca09SBarry Smith return hash; 2647df05ca09SBarry Smith } 264877a5e07dSBarry Smith 264977a5e07dSBarry Smith /*MC 265087497f52SBarry Smith MPIU_Allreduce - a PETSc replacement for `MPI_Allreduce()` that tries to determine if the call from all the MPI ranks occur from the 265187497f52SBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI ranks follow different code paths 265287497f52SBarry Smith resulting in inconsistent and incorrect calls to `MPI_Allreduce()`. 265377a5e07dSBarry Smith 2654d083f849SBarry Smith Collective 265577a5e07dSBarry Smith 265677a5e07dSBarry Smith Synopsis: 265777a5e07dSBarry Smith #include <petscsys.h> 265877a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 265977a5e07dSBarry Smith 266077a5e07dSBarry Smith Input Parameters: 2661df05ca09SBarry Smith + a - pointer to the input data to be reduced 2662df05ca09SBarry Smith . c - the number of MPI data items in a and b 266387497f52SBarry Smith . d - the MPI datatype, for example `MPI_INT` 266487497f52SBarry Smith . e - the MPI operation, for example `MPI_SUM` 2665df05ca09SBarry Smith - fcomm - the MPI communicator on which the operation occurs 266677a5e07dSBarry Smith 266777a5e07dSBarry Smith Output Parameter: 2668df05ca09SBarry Smith . b - the reduced values 266977a5e07dSBarry Smith 2670e28ce29aSPatrick Sanan Notes: 267187497f52SBarry Smith In optimized mode this directly calls `MPI_Allreduce()` 267277a5e07dSBarry Smith 2673df05ca09SBarry Smith This is defined as a macro that can return error codes internally so it cannot be used in a subroutine that returns void. 2674df05ca09SBarry Smith 267587497f52SBarry Smith The error code this returns should be checked with `PetscCall()` even though it looks like an MPI function because it always returns PETSc error codes 2676df05ca09SBarry Smith 267777a5e07dSBarry Smith Level: developer 267877a5e07dSBarry Smith 2679db781477SPatrick Sanan .seealso: `MPI_Allreduce()` 268077a5e07dSBarry Smith M*/ 26819371c9d4SSatish Balay #define MPIU_Allreduce(a, b, c, d, e, fcomm) \ 26829371c9d4SSatish Balay PetscMacroReturnStandard(PetscMPIInt a_b1[6], a_b2[6]; int _mpiu_allreduce_c_int = (int)c; a_b1[0] = -(PetscMPIInt)__LINE__; a_b1[1] = -a_b1[0]; a_b1[2] = -(PetscMPIInt)PetscStrHash(PETSC_FUNCTION_NAME); a_b1[3] = -a_b1[2]; a_b1[4] = -(PetscMPIInt)(c); a_b1[5] = -a_b1[4]; PetscCallMPI(MPI_Allreduce(a_b1, a_b2, 6, MPI_INT, MPI_MAX, fcomm)); PetscCheck(-a_b2[0] == a_b2[1], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (code lines) on different processors"); PetscCheck(-a_b2[2] == a_b2[3], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called in different locations (functions) on different processors"); PetscCheck(-a_b2[4] == a_b2[5], PETSC_COMM_SELF, PETSC_ERR_PLIB, "MPI_Allreduce() called with different counts %d on different processors", _mpiu_allreduce_c_int); PetscCallMPI(MPI_Allreduce((a), (b), (c), d, e, (fcomm)));) 2683b2566f29SBarry Smith #else 2684*f3fa974cSJacob Faibussowitsch #define MPIU_Allreduce(a, b, c, d, e, fcomm) PetscMacroReturnStandard(PetscCallMPI(MPI_Allreduce((a), (b), (c), (d), (e), (fcomm)))) 2685b2566f29SBarry Smith #endif 2686b2566f29SBarry Smith 2687b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 26888198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint, PetscMPIInt, MPI_Info, MPI_Comm, void *, MPI_Win *); 26898198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win, PetscMPIInt, MPI_Aint *, PetscMPIInt *, void *); 26902f065d89SBarry Smith #endif 26918198064fSBarry Smith 2692cd88fca5SStefano Zampini /* this is a vile hack */ 2693cd88fca5SStefano Zampini #if defined(PETSC_HAVE_NECMPI) 26949371c9d4SSatish Balay #if !defined(PETSC_NECMPI_VERSION_MAJOR) || !defined(PETSC_NECMPI_VERSION_MINOR) || PETSC_NECMPI_VERSION_MAJOR < 2 || (PETSC_NECMPI_VERSION_MAJOR == 2 && PETSC_NECMPI_VERSION_MINOR < 18) 2695cd88fca5SStefano Zampini #define MPI_Type_free(a) (*(a) = MPI_DATATYPE_NULL, 0); 2696cd88fca5SStefano Zampini #endif 2697961fb248SStefano Zampini #endif 2698cd88fca5SStefano Zampini 269912801b39SBarry Smith /* 270060fbe2beSVaclav Hapla List of external packages and queries on it 270160fbe2beSVaclav Hapla */ 270260fbe2beSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscHasExternalPackage(const char[], PetscBool *); 270360fbe2beSVaclav Hapla 2704a52b435bSMark Adams /* 2705a52b435bSMark Adams OpenMP support 2706a52b435bSMark Adams */ 2707a52b435bSMark Adams #if defined(_OPENMP) 2708a52b435bSMark Adams #define PetscPragmaOMP(...) _Pragma(PetscStringize(omp __VA_ARGS__)) 2709a52b435bSMark Adams #else // no OpenMP so no threads 2710a52b435bSMark Adams #define PetscPragmaOMP(...) 2711a52b435bSMark Adams #endif 2712a52b435bSMark Adams 2713f1f2ae84SBarry Smith /* this cannot go here because it may be in a different shared library */ 2714f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerBegin(void); 2715f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPIServerEnd(void); 2716f1f2ae84SBarry Smith PETSC_EXTERN PetscErrorCode PCMPICommsDestroy(void); 2717d382aafbSBarry Smith #endif 2718