1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10d382aafbSBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 112981ebdbSBarry Smith in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/ 122981ebdbSBarry Smith does not exist and petscconf.h is in the same directory as the other PETSc include files. 13d382aafbSBarry Smith */ 14d382aafbSBarry Smith #include "petscconf.h" 15d382aafbSBarry Smith #include "petscfix.h" 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith #endif 25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith #define _BSD_SOURCE 2773fca5a0SBarry Smith #endif 28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 29ea0fecefSShri Abhyankar #define _GNU_SOURCE 30ea0fecefSShri Abhyankar #endif 3173fca5a0SBarry Smith #endif 3273fca5a0SBarry Smith 33d382aafbSBarry Smith /* ========================================================================== */ 34d382aafbSBarry Smith /* 352981ebdbSBarry Smith This facilitates using the C version of PETSc from C++ and the 36e2e64c6bSBarry Smith C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 37d382aafbSBarry Smith */ 38d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 39d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 40d382aafbSBarry Smith #endif 411ec50b02SJed Brown 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 49014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 50014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 51014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY) 52014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 53014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 54d382aafbSBarry Smith #else 55014dd563SJed Brown # define PETSC_DLLEXPORT 56014dd563SJed Brown # define PETSC_DLLIMPORT 57014dd563SJed Brown #endif 58014dd563SJed Brown 59014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 60014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 61014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 62014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 63014dd563SJed Brown #endif 64014dd563SJed Brown 65014dd563SJed Brown #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 66014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 67638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C" 68014dd563SJed Brown #else 69014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 70638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF 71d382aafbSBarry Smith #endif 72d382aafbSBarry Smith /* ========================================================================== */ 73d382aafbSBarry Smith /* 74d382aafbSBarry Smith Current PETSc version number and release date. Also listed in 75d382aafbSBarry Smith Web page 76d382aafbSBarry Smith src/docs/tex/manual/intro.tex, 77d382aafbSBarry Smith src/docs/tex/manual/manual.tex. 78d382aafbSBarry Smith src/docs/website/index.html. 79d382aafbSBarry Smith */ 80d382aafbSBarry Smith #include "petscversion.h" 81301d30feSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 82d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1) 83301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 84d382aafbSBarry Smith PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 85301d30feSBarry Smith PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 86d382aafbSBarry Smith #else 87301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 88301d30feSBarry Smith PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 89d382aafbSBarry Smith #endif 90d382aafbSBarry Smith 91d382aafbSBarry Smith /*MC 92d382aafbSBarry Smith PetscGetVersion - Gets the PETSc version information in a string. 93d382aafbSBarry Smith 94d382aafbSBarry Smith Input Parameter: 95d382aafbSBarry Smith . len - length of the string 96d382aafbSBarry Smith 97d382aafbSBarry Smith Output Parameter: 98d382aafbSBarry Smith . version - version string 99d382aafbSBarry Smith 100d382aafbSBarry Smith Level: developer 101d382aafbSBarry Smith 102d382aafbSBarry Smith Usage: 103d382aafbSBarry Smith char version[256]; 104d382aafbSBarry Smith ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 105d382aafbSBarry Smith 106d382aafbSBarry Smith Fortran Note: 107d382aafbSBarry Smith This routine is not supported in Fortran. 108d382aafbSBarry Smith 109d382aafbSBarry Smith .seealso: PetscGetProgramName() 110d382aafbSBarry Smith 111d382aafbSBarry Smith M*/ 112d382aafbSBarry Smith 113d382aafbSBarry Smith /* ========================================================================== */ 114d382aafbSBarry Smith 115d382aafbSBarry Smith /* 116d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 117d382aafbSBarry Smith 118d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 119d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 120d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 121d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 122d382aafbSBarry Smith mpicxx.h directly in their code 123d382aafbSBarry Smith */ 124*fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 125d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 126*fa9e63e2SJed Brown #endif 127*fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 128d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 129*fa9e63e2SJed Brown #endif 130d382aafbSBarry Smith #include "mpi.h" 13165013866SBarry Smith 132d382aafbSBarry Smith /* 1332981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 134d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 135d382aafbSBarry Smith */ 136d382aafbSBarry Smith #include <stdio.h> 137d382aafbSBarry Smith 138d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 139d382aafbSBarry Smith #if !defined(MPIAPI) 140d382aafbSBarry Smith #define MPIAPI 141d382aafbSBarry Smith #endif 142d382aafbSBarry Smith 143b3506946SBarry Smith 144d382aafbSBarry Smith /*MC 145d382aafbSBarry Smith PetscErrorCode - datatype used for return error code from all PETSc functions 146d382aafbSBarry Smith 147d382aafbSBarry Smith Level: beginner 148d382aafbSBarry Smith 149d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ 150d382aafbSBarry Smith M*/ 151d382aafbSBarry Smith typedef int PetscErrorCode; 152d382aafbSBarry Smith 153d382aafbSBarry Smith /*MC 154d382aafbSBarry Smith 155503cfb0cSBarry Smith PetscClassId - A unique id used to identify each PETSc class. 156d382aafbSBarry Smith (internal integer in the data structure used for error 1572981ebdbSBarry Smith checking). These are all computed by an offset from the lowest 1580700a824SBarry Smith one, PETSC_SMALLEST_CLASSID. 159d382aafbSBarry Smith 160d382aafbSBarry Smith Level: advanced 161d382aafbSBarry Smith 1620700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 163d382aafbSBarry Smith M*/ 1640700a824SBarry Smith typedef int PetscClassId; 165d382aafbSBarry Smith 166d382aafbSBarry Smith 167d382aafbSBarry Smith /*MC 168d382aafbSBarry Smith PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 169d382aafbSBarry Smith 170d382aafbSBarry Smith Level: intermediate 171d382aafbSBarry Smith 172d382aafbSBarry Smith Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 1733b2a8c54SBarry Smith standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 174d382aafbSBarry Smith 1753b2a8c54SBarry Smith PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 1762981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 177d382aafbSBarry Smith 1783b2a8c54SBarry Smith PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 1792981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error. 180d382aafbSBarry Smith 181d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt 182d382aafbSBarry Smith 183d382aafbSBarry Smith M*/ 184d382aafbSBarry Smith typedef int PetscMPIInt; 185d382aafbSBarry Smith 186d382aafbSBarry Smith /*MC 187d382aafbSBarry Smith PetscEnum - datatype used to pass enum types within PETSc functions. 188d382aafbSBarry Smith 189d382aafbSBarry Smith Level: intermediate 190d382aafbSBarry Smith 191d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 192d382aafbSBarry Smith M*/ 193d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum; 194d382aafbSBarry Smith 195d382aafbSBarry Smith /*MC 196d382aafbSBarry Smith PetscInt - PETSc type that represents integer - used primarily to 1973b2a8c54SBarry Smith represent size of arrays and indexing into arrays. Its size can be configured with the option 198d382aafbSBarry Smith --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 199d382aafbSBarry Smith 200d382aafbSBarry Smith Level: intermediate 201d382aafbSBarry Smith 202d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 203d382aafbSBarry Smith M*/ 204f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8) 205f505b413SSatish Balay typedef long long Petsc64bitInt; 206f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 207236ed0a3SSatish Balay typedef __int64 Petsc64bitInt; 208236ed0a3SSatish Balay #else 209f505b413SSatish Balay typedef unknown64bit Petsc64bitInt 210236ed0a3SSatish Balay #endif 211d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 212236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt; 213d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT 214d382aafbSBarry Smith #else 215d382aafbSBarry Smith typedef int PetscInt; 216d382aafbSBarry Smith #define MPIU_INT MPI_INT 217d382aafbSBarry Smith #endif 218236ed0a3SSatish Balay 219d382aafbSBarry Smith 220702bc34aSSatish Balay /*MC 221702bc34aSSatish Balay PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 222702bc34aSSatish Balay 223702bc34aSSatish Balay Level: intermediate 224702bc34aSSatish Balay 225702bc34aSSatish Balay Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 226702bc34aSSatish Balay standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 227702bc34aSSatish Balay (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 228702bc34aSSatish Balay 229702bc34aSSatish Balay PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 2302981ebdbSBarry Smith PETSC_ERR_ARG_OUTOFRANGE error. 231702bc34aSSatish Balay 232702bc34aSSatish Balay PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 2332981ebdbSBarry Smith generates a PETSC_ERR_ARG_OUTOFRANGE error 234702bc34aSSatish Balay 2352981ebdbSBarry Smith Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 236702bc34aSSatish Balay if you run ./configure with the option 237702bc34aSSatish Balay --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 2382981ebdbSBarry Smith but you need to also use --known-64-bit-blas-indices. 2392981ebdbSBarry Smith 2402981ebdbSBarry Smith MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 2412981ebdbSBarry Smith 2422981ebdbSBarry Smith Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 243702bc34aSSatish Balay 244702bc34aSSatish Balay External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 245702bc34aSSatish Balay be used with PETSc if you have set PetscBLASInt to long int. 246702bc34aSSatish Balay 247702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt 248702bc34aSSatish Balay 249702bc34aSSatish Balay M*/ 250702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 251702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt; 252702bc34aSSatish Balay #else 253702bc34aSSatish Balay typedef int PetscBLASInt; 254702bc34aSSatish Balay #endif 255702bc34aSSatish Balay 25658b60935SBarry Smith /*EC 25758b60935SBarry Smith 2582981ebdbSBarry Smith PetscPrecision - indicates what precision the object is using. This is currently not used. 25958b60935SBarry Smith 26058b60935SBarry Smith Level: advanced 26158b60935SBarry Smith 26258b60935SBarry Smith .seealso: PetscObjectSetPrecision() 26358b60935SBarry Smith E*/ 26458b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 265014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[]; 26658b60935SBarry Smith 267503cfb0cSBarry Smith /* 268503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 269503cfb0cSBarry Smith */ 270d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 271d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT 272d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 273d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG 274d382aafbSBarry Smith #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 275d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT 276d382aafbSBarry Smith #else 277d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 278d382aafbSBarry Smith #endif 279d382aafbSBarry Smith 280d382aafbSBarry Smith 281d382aafbSBarry Smith /* 282d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 283d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 284d382aafbSBarry Smith */ 285014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 286d382aafbSBarry Smith 287d382aafbSBarry Smith /* 288d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 289d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 290d382aafbSBarry Smith */ 291014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 292d382aafbSBarry Smith 293d382aafbSBarry Smith /*MC 294d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 295d382aafbSBarry Smith 296d382aafbSBarry Smith Synopsis: 297ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 298d382aafbSBarry Smith 299eca87e8dSBarry Smith Not Collective 300eca87e8dSBarry Smith 301d382aafbSBarry Smith Input Parameters: 302d382aafbSBarry Smith . cond - condition or expression 303d382aafbSBarry Smith 304d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 305d382aafbSBarry Smith branch is unlikely. 306d382aafbSBarry Smith 307d382aafbSBarry Smith Level: advanced 308d382aafbSBarry Smith 309d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 310d382aafbSBarry Smith M*/ 311d382aafbSBarry Smith 312d382aafbSBarry Smith /*MC 313d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 314d382aafbSBarry Smith 315d382aafbSBarry Smith Synopsis: 316ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 317d382aafbSBarry Smith 318eca87e8dSBarry Smith Not Collective 319eca87e8dSBarry Smith 320d382aafbSBarry Smith Input Parameters: 321d382aafbSBarry Smith . cond - condition or expression 322d382aafbSBarry Smith 323d382aafbSBarry Smith Note: This returns the same truth value, it is only a hint to compilers that the resulting 324d382aafbSBarry Smith branch is likely. 325d382aafbSBarry Smith 326d382aafbSBarry Smith Level: advanced 327d382aafbSBarry Smith 328d382aafbSBarry Smith .seealso: PetscUnlikely() 329d382aafbSBarry Smith M*/ 330d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 331d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 332d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 333d382aafbSBarry Smith #else 334cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 335cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 336d382aafbSBarry Smith #endif 337d382aafbSBarry Smith 338d382aafbSBarry Smith /* 339d382aafbSBarry Smith Defines some elementary mathematics functions and constants. 340d382aafbSBarry Smith */ 341d382aafbSBarry Smith #include "petscmath.h" 342d382aafbSBarry Smith 343d382aafbSBarry Smith /* 344d382aafbSBarry Smith Declare extern C stuff after including external header files 345d382aafbSBarry Smith */ 346d382aafbSBarry Smith 347d382aafbSBarry Smith 348d382aafbSBarry Smith /* 349d382aafbSBarry Smith Basic PETSc constants 350d382aafbSBarry Smith */ 351d382aafbSBarry Smith 352d382aafbSBarry Smith /*E 353ace3abfcSBarry Smith PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 354d382aafbSBarry Smith 355d382aafbSBarry Smith Level: beginner 356d382aafbSBarry Smith 357ace3abfcSBarry Smith Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 35834e82e7dSBarry Smith boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 35934e82e7dSBarry Smith 360d382aafbSBarry Smith E*/ 361ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 362014dd563SJed Brown PETSC_EXTERN const char *PetscBools[]; 36370b3c8c7SBarry Smith 36470b3c8c7SBarry Smith /*E 36570b3c8c7SBarry Smith PetscCopyMode - Determines how an array passed to certain functions is copied or retained 36670b3c8c7SBarry Smith 36770b3c8c7SBarry Smith Level: beginner 36870b3c8c7SBarry Smith 36970b3c8c7SBarry Smith $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 37070b3c8c7SBarry Smith $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 37170b3c8c7SBarry Smith $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 37270b3c8c7SBarry Smith $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 37370b3c8c7SBarry Smith the array but the user must delete the array after the object is destroyed. 37470b3c8c7SBarry Smith 37570b3c8c7SBarry Smith E*/ 37670b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 377014dd563SJed Brown PETSC_EXTERN const char *PetscCopyModes[]; 378d382aafbSBarry Smith 379d382aafbSBarry Smith /*MC 380ace3abfcSBarry Smith PETSC_FALSE - False value of PetscBool 381d382aafbSBarry Smith 382d382aafbSBarry Smith Level: beginner 383d382aafbSBarry Smith 384d382aafbSBarry Smith Note: Zero integer 385d382aafbSBarry Smith 386ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE 387d382aafbSBarry Smith M*/ 388d382aafbSBarry Smith 389d382aafbSBarry Smith /*MC 390ace3abfcSBarry Smith PETSC_TRUE - True value of PetscBool 391d382aafbSBarry Smith 392d382aafbSBarry Smith Level: beginner 393d382aafbSBarry Smith 394d382aafbSBarry Smith Note: Nonzero integer 395d382aafbSBarry Smith 396ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE 397d382aafbSBarry Smith M*/ 398d382aafbSBarry Smith 399d382aafbSBarry Smith /*MC 400d382aafbSBarry Smith PETSC_NULL - standard way of passing in a null or array or pointer 401d382aafbSBarry Smith 402d382aafbSBarry Smith Level: beginner 403d382aafbSBarry Smith 404d382aafbSBarry Smith Notes: accepted by many PETSc functions to not set a parameter and instead use 405d382aafbSBarry Smith some default 406d382aafbSBarry Smith 407d382aafbSBarry Smith This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 408503cfb0cSBarry Smith PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 409d382aafbSBarry Smith 41034e82e7dSBarry Smith Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 41134e82e7dSBarry Smith different versions of Unix. It is tricky to insure the correct include file is always included. 41234e82e7dSBarry Smith 413d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 414d382aafbSBarry Smith 415d382aafbSBarry Smith M*/ 416d382aafbSBarry Smith #define PETSC_NULL 0 417d382aafbSBarry Smith 418d382aafbSBarry Smith /*MC 419d382aafbSBarry Smith PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 420d382aafbSBarry Smith 421d382aafbSBarry Smith Level: beginner 422d382aafbSBarry Smith 423d382aafbSBarry Smith Note: accepted by many PETSc functions to not set a parameter and instead use 424d382aafbSBarry Smith some default 425d382aafbSBarry Smith 426d382aafbSBarry Smith Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 427d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 428d382aafbSBarry Smith 429d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 430d382aafbSBarry Smith 431d382aafbSBarry Smith M*/ 432d382aafbSBarry Smith #define PETSC_IGNORE PETSC_NULL 433d382aafbSBarry Smith 434d382aafbSBarry Smith /*MC 435557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 436557d4da8SBarry Smith where you wish PETSc to use the default. 437557d4da8SBarry Smith 438557d4da8SBarry Smith Level: beginner 439557d4da8SBarry Smith 440557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 441557d4da8SBarry Smith 442557d4da8SBarry Smith M*/ 443557d4da8SBarry Smith #define PETSC_DECIDE -1 444557d4da8SBarry Smith 445557d4da8SBarry Smith /*MC 446d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 447d382aafbSBarry Smith where you wish PETSc to compute the required value. 448d382aafbSBarry Smith 449d382aafbSBarry Smith Level: beginner 450d382aafbSBarry Smith 451557d4da8SBarry Smith 452557d4da8SBarry Smith Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 453557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 454557d4da8SBarry Smith 455d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 456d382aafbSBarry Smith 457d382aafbSBarry Smith M*/ 458d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 459d382aafbSBarry Smith 460d382aafbSBarry Smith /*MC 461557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 462557d4da8SBarry Smith where you wish PETSc to use the default. 463557d4da8SBarry Smith 464557d4da8SBarry Smith Level: beginner 465557d4da8SBarry Smith 466557d4da8SBarry Smith Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 467557d4da8SBarry Smith 468557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 469557d4da8SBarry Smith 470557d4da8SBarry Smith M*/ 471557d4da8SBarry Smith #define PETSC_DEFAULT -2 472557d4da8SBarry Smith 473557d4da8SBarry Smith /*MC 474d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 475d382aafbSBarry Smith all the processs that PETSc knows about. 476d382aafbSBarry Smith 477d382aafbSBarry Smith Level: beginner 478d382aafbSBarry Smith 479d382aafbSBarry Smith Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 480d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 481d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 482d382aafbSBarry Smith PetscInitialize() 483d382aafbSBarry Smith 484d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 485d382aafbSBarry Smith 486d382aafbSBarry Smith M*/ 487014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 488d382aafbSBarry Smith 489d382aafbSBarry Smith /*MC 490503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 491d382aafbSBarry Smith 492d382aafbSBarry Smith Level: beginner 493d382aafbSBarry Smith 494d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 495d382aafbSBarry Smith 496d382aafbSBarry Smith M*/ 497d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 498d382aafbSBarry Smith 499014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 500014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 501014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize; 502d382aafbSBarry Smith 503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 506d382aafbSBarry Smith 507d382aafbSBarry Smith /*MC 508d382aafbSBarry Smith PetscMalloc - Allocates memory 509d382aafbSBarry Smith 510eca87e8dSBarry Smith Synopsis: 511eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 512eca87e8dSBarry Smith 513eca87e8dSBarry Smith Not Collective 514eca87e8dSBarry Smith 515d382aafbSBarry Smith Input Parameter: 516d382aafbSBarry Smith . m - number of bytes to allocate 517d382aafbSBarry Smith 518d382aafbSBarry Smith Output Parameter: 519d382aafbSBarry Smith . result - memory allocated 520d382aafbSBarry Smith 521d382aafbSBarry Smith Level: beginner 522d382aafbSBarry Smith 523d382aafbSBarry Smith Notes: Memory is always allocated at least double aligned 524d382aafbSBarry Smith 525d382aafbSBarry Smith If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 526d382aafbSBarry Smith properly handle not freeing the null pointer. 527d382aafbSBarry Smith 528d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 529d382aafbSBarry Smith 530d382aafbSBarry Smith Concepts: memory allocation 531d382aafbSBarry Smith 532d382aafbSBarry Smith M*/ 5332714b66aSJed Brown #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 534d382aafbSBarry Smith 535d382aafbSBarry Smith /*MC 536503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 537d382aafbSBarry Smith 538d382aafbSBarry Smith Synopsis: 539d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 540d382aafbSBarry Smith 541eca87e8dSBarry Smith Not Collective 542eca87e8dSBarry Smith 543eca87e8dSBarry Smith Input Parameters: 544eca87e8dSBarry Smith . addr - address to align (any pointer type) 545eca87e8dSBarry Smith 546d382aafbSBarry Smith Level: developer 547d382aafbSBarry Smith 548d382aafbSBarry Smith .seealso: PetscMallocAlign() 549d382aafbSBarry Smith 550d382aafbSBarry Smith Concepts: memory allocation 551d382aafbSBarry Smith M*/ 552d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 553d382aafbSBarry Smith 554d382aafbSBarry Smith /*MC 555503cfb0cSBarry Smith PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 556d382aafbSBarry Smith 557eca87e8dSBarry Smith Synopsis: 558eca87e8dSBarry Smith PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 559eca87e8dSBarry Smith 560eca87e8dSBarry Smith Not Collective 561eca87e8dSBarry Smith 562d382aafbSBarry Smith Input Parameter: 563d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 564d382aafbSBarry Smith . t1 - type of first memory elements 565d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 566d382aafbSBarry Smith - t2 - type of second memory elements 567d382aafbSBarry Smith 568d382aafbSBarry Smith Output Parameter: 569d382aafbSBarry Smith + r1 - memory allocated in first chunk 570d382aafbSBarry Smith - r2 - memory allocated in second chunk 571d382aafbSBarry Smith 572d382aafbSBarry Smith Level: developer 573d382aafbSBarry Smith 574d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 575d382aafbSBarry Smith 576d382aafbSBarry Smith Concepts: memory allocation 577d382aafbSBarry Smith 578d382aafbSBarry Smith M*/ 579d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 580d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 581d382aafbSBarry Smith #else 5822981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 583d382aafbSBarry Smith #endif 584d382aafbSBarry Smith 585d382aafbSBarry Smith /*MC 586503cfb0cSBarry Smith PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 587d382aafbSBarry Smith 588eca87e8dSBarry Smith Synopsis: 589eca87e8dSBarry Smith PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 590eca87e8dSBarry Smith 591eca87e8dSBarry Smith Not Collective 592eca87e8dSBarry Smith 593d382aafbSBarry Smith Input Parameter: 594d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 595d382aafbSBarry Smith . t1 - type of first memory elements 596d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 597d382aafbSBarry Smith . t2 - type of second memory elements 598d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 599d382aafbSBarry Smith - t3 - type of third memory elements 600d382aafbSBarry Smith 601d382aafbSBarry Smith Output Parameter: 602d382aafbSBarry Smith + r1 - memory allocated in first chunk 603d382aafbSBarry Smith . r2 - memory allocated in second chunk 604d382aafbSBarry Smith - r3 - memory allocated in third chunk 605d382aafbSBarry Smith 606d382aafbSBarry Smith Level: developer 607d382aafbSBarry Smith 608d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 609d382aafbSBarry Smith 610d382aafbSBarry Smith Concepts: memory allocation 611d382aafbSBarry Smith 612d382aafbSBarry Smith M*/ 613d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 614d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 615d382aafbSBarry Smith #else 6163b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 617d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 618d382aafbSBarry Smith #endif 619d382aafbSBarry Smith 620d382aafbSBarry Smith /*MC 621503cfb0cSBarry Smith PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 622d382aafbSBarry Smith 623eca87e8dSBarry Smith Synopsis: 624eca87e8dSBarry Smith PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 625eca87e8dSBarry Smith 626eca87e8dSBarry Smith Not Collective 627eca87e8dSBarry Smith 628d382aafbSBarry Smith Input Parameter: 629d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 630d382aafbSBarry Smith . t1 - type of first memory elements 631d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 632d382aafbSBarry Smith . t2 - type of second memory elements 633d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 634d382aafbSBarry Smith . t3 - type of third memory elements 635d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 636d382aafbSBarry Smith - t4 - type of fourth memory elements 637d382aafbSBarry Smith 638d382aafbSBarry Smith Output Parameter: 639d382aafbSBarry Smith + r1 - memory allocated in first chunk 640d382aafbSBarry Smith . r2 - memory allocated in second chunk 641d382aafbSBarry Smith . r3 - memory allocated in third chunk 642d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 643d382aafbSBarry Smith 644d382aafbSBarry Smith Level: developer 645d382aafbSBarry Smith 646d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 647d382aafbSBarry Smith 648d382aafbSBarry Smith Concepts: memory allocation 649d382aafbSBarry Smith 650d382aafbSBarry Smith M*/ 651d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 652d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 653d382aafbSBarry Smith #else 654d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 6553b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 656d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 657d382aafbSBarry Smith #endif 658d382aafbSBarry Smith 659d382aafbSBarry Smith /*MC 660503cfb0cSBarry Smith PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 661d382aafbSBarry Smith 662eca87e8dSBarry Smith Synopsis: 663eca87e8dSBarry Smith PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 664eca87e8dSBarry Smith 665eca87e8dSBarry Smith Not Collective 666eca87e8dSBarry Smith 667d382aafbSBarry Smith Input Parameter: 668d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 669d382aafbSBarry Smith . t1 - type of first memory elements 670d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 671d382aafbSBarry Smith . t2 - type of second memory elements 672d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 673d382aafbSBarry Smith . t3 - type of third memory elements 674d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 675d382aafbSBarry Smith . t4 - type of fourth memory elements 676d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 677d382aafbSBarry Smith - t5 - type of fifth memory elements 678d382aafbSBarry Smith 679d382aafbSBarry Smith Output Parameter: 680d382aafbSBarry Smith + r1 - memory allocated in first chunk 681d382aafbSBarry Smith . r2 - memory allocated in second chunk 682d382aafbSBarry Smith . r3 - memory allocated in third chunk 683d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 684d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 685d382aafbSBarry Smith 686d382aafbSBarry Smith Level: developer 687d382aafbSBarry Smith 688d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 689d382aafbSBarry Smith 690d382aafbSBarry Smith Concepts: memory allocation 691d382aafbSBarry Smith 692d382aafbSBarry Smith M*/ 693d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 694d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 695d382aafbSBarry Smith #else 696d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 6973b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 698d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 699d382aafbSBarry Smith #endif 700d382aafbSBarry Smith 701d382aafbSBarry Smith 702d382aafbSBarry Smith /*MC 703503cfb0cSBarry Smith PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 704d382aafbSBarry Smith 705eca87e8dSBarry Smith Synopsis: 706eca87e8dSBarry Smith PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 707eca87e8dSBarry Smith 708eca87e8dSBarry Smith Not Collective 709eca87e8dSBarry Smith 710d382aafbSBarry Smith Input Parameter: 711d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 712d382aafbSBarry Smith . t1 - type of first memory elements 713d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 714d382aafbSBarry Smith . t2 - type of second memory elements 715d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 716d382aafbSBarry Smith . t3 - type of third memory elements 717d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 718d382aafbSBarry Smith . t4 - type of fourth memory elements 719d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 720d382aafbSBarry Smith . t5 - type of fifth memory elements 721d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 722d382aafbSBarry Smith - t6 - type of sixth memory elements 723d382aafbSBarry Smith 724d382aafbSBarry Smith Output Parameter: 725d382aafbSBarry Smith + r1 - memory allocated in first chunk 726d382aafbSBarry Smith . r2 - memory allocated in second chunk 727d382aafbSBarry Smith . r3 - memory allocated in third chunk 728d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 729d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 730d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 731d382aafbSBarry Smith 732d382aafbSBarry Smith Level: developer 733d382aafbSBarry Smith 734d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 735d382aafbSBarry Smith 736d382aafbSBarry Smith Concepts: memory allocation 737d382aafbSBarry Smith 738d382aafbSBarry Smith M*/ 739d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 740d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 741d382aafbSBarry Smith #else 742d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 7433b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 744d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 745d382aafbSBarry Smith #endif 746d382aafbSBarry Smith 747d382aafbSBarry Smith /*MC 748503cfb0cSBarry Smith PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 749d382aafbSBarry Smith 750eca87e8dSBarry Smith Synopsis: 751eca87e8dSBarry Smith PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 752eca87e8dSBarry Smith 753eca87e8dSBarry Smith Not Collective 754eca87e8dSBarry Smith 755d382aafbSBarry Smith Input Parameter: 756d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 757d382aafbSBarry Smith . t1 - type of first memory elements 758d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 759d382aafbSBarry Smith . t2 - type of second memory elements 760d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 761d382aafbSBarry Smith . t3 - type of third memory elements 762d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 763d382aafbSBarry Smith . t4 - type of fourth memory elements 764d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 765d382aafbSBarry Smith . t5 - type of fifth memory elements 766d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 767d382aafbSBarry Smith . t6 - type of sixth memory elements 768d382aafbSBarry Smith . m7 - number of elements to allocate in 7th chunk (may be zero) 769d382aafbSBarry Smith - t7 - type of sixth memory elements 770d382aafbSBarry Smith 771d382aafbSBarry Smith Output Parameter: 772d382aafbSBarry Smith + r1 - memory allocated in first chunk 773d382aafbSBarry Smith . r2 - memory allocated in second chunk 774d382aafbSBarry Smith . r3 - memory allocated in third chunk 775d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 776d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 777d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 778eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 779d382aafbSBarry Smith 780d382aafbSBarry Smith Level: developer 781d382aafbSBarry Smith 782d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 783d382aafbSBarry Smith 784d382aafbSBarry Smith Concepts: memory allocation 785d382aafbSBarry Smith 786d382aafbSBarry Smith M*/ 787d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 788d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 789d382aafbSBarry Smith #else 790d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 7913b98c0a2SBarry Smith ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 792d382aafbSBarry Smith || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 793d382aafbSBarry Smith #endif 794d382aafbSBarry Smith 795d382aafbSBarry Smith /*MC 796503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 797d382aafbSBarry Smith 798eca87e8dSBarry Smith Synopsis: 799eca87e8dSBarry Smith PetscErrorCode PetscNew(struct type,((type *))result) 800eca87e8dSBarry Smith 801eca87e8dSBarry Smith Not Collective 802eca87e8dSBarry Smith 803d382aafbSBarry Smith Input Parameter: 804d382aafbSBarry Smith . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 805d382aafbSBarry Smith 806d382aafbSBarry Smith Output Parameter: 807d382aafbSBarry Smith . result - memory allocated 808d382aafbSBarry Smith 809d382aafbSBarry Smith Level: beginner 810d382aafbSBarry Smith 811ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 812d382aafbSBarry Smith 813d382aafbSBarry Smith Concepts: memory allocation 814d382aafbSBarry Smith 815d382aafbSBarry Smith M*/ 816d382aafbSBarry Smith #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 817ad0619ddSBarry Smith 818ad0619ddSBarry Smith /*MC 819ad0619ddSBarry Smith PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 820ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 821ad0619ddSBarry Smith 822ad0619ddSBarry Smith Synopsis: 823ad0619ddSBarry Smith PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 824ad0619ddSBarry Smith 825ad0619ddSBarry Smith Not Collective 826ad0619ddSBarry Smith 827ad0619ddSBarry Smith Input Parameter: 828ad0619ddSBarry Smith + obj - object memory is logged to 829ad0619ddSBarry Smith - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 830ad0619ddSBarry Smith 831ad0619ddSBarry Smith Output Parameter: 832ad0619ddSBarry Smith . result - memory allocated 833ad0619ddSBarry Smith 834ad0619ddSBarry Smith Level: developer 835ad0619ddSBarry Smith 836ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 837ad0619ddSBarry Smith 838ad0619ddSBarry Smith Concepts: memory allocation 839ad0619ddSBarry Smith 840ad0619ddSBarry Smith M*/ 841d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 842d382aafbSBarry Smith 843d382aafbSBarry Smith /*MC 844d382aafbSBarry Smith PetscFree - Frees memory 845d382aafbSBarry Smith 846eca87e8dSBarry Smith Synopsis: 847eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 848eca87e8dSBarry Smith 849eca87e8dSBarry Smith Not Collective 850eca87e8dSBarry Smith 851d382aafbSBarry Smith Input Parameter: 852d382aafbSBarry Smith . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 853d382aafbSBarry Smith 854d382aafbSBarry Smith Level: beginner 855d382aafbSBarry Smith 856d382aafbSBarry Smith Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 857d382aafbSBarry Smith 858d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 859d382aafbSBarry Smith 860d382aafbSBarry Smith Concepts: memory allocation 861d382aafbSBarry Smith 862d382aafbSBarry Smith M*/ 86312537b14SJed Brown #define PetscFree(a) ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0))) 864d382aafbSBarry Smith 865d382aafbSBarry Smith /*MC 866d382aafbSBarry Smith PetscFreeVoid - Frees memory 867d382aafbSBarry Smith 868d382aafbSBarry Smith Synopsis: 869d382aafbSBarry Smith void PetscFreeVoid(void *memory) 870d382aafbSBarry Smith 871eca87e8dSBarry Smith Not Collective 872eca87e8dSBarry Smith 873eca87e8dSBarry Smith Input Parameter: 874eca87e8dSBarry Smith . memory - memory to free 875eca87e8dSBarry Smith 876d382aafbSBarry Smith Level: beginner 877d382aafbSBarry Smith 878d382aafbSBarry Smith Notes: This is different from PetscFree() in that no error code is returned 879d382aafbSBarry Smith 880d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc() 881d382aafbSBarry Smith 882d382aafbSBarry Smith Concepts: memory allocation 883d382aafbSBarry Smith 884d382aafbSBarry Smith M*/ 8852714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 886d382aafbSBarry Smith 887d382aafbSBarry Smith 888d382aafbSBarry Smith /*MC 889d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 890d382aafbSBarry Smith 891eca87e8dSBarry Smith Synopsis: 892eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 893eca87e8dSBarry Smith 894eca87e8dSBarry Smith Not Collective 895eca87e8dSBarry Smith 896d382aafbSBarry Smith Input Parameter: 897d382aafbSBarry Smith + memory1 - memory to free 898d382aafbSBarry Smith - memory2 - 2nd memory to free 899d382aafbSBarry Smith 900d382aafbSBarry Smith Level: developer 901d382aafbSBarry Smith 902d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc2() 903d382aafbSBarry Smith 904d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 905d382aafbSBarry Smith 906d382aafbSBarry Smith Concepts: memory allocation 907d382aafbSBarry Smith 908d382aafbSBarry Smith M*/ 909d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 910d382aafbSBarry Smith #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 911d382aafbSBarry Smith #else 91281dabb53SJed Brown #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 913d382aafbSBarry Smith #endif 914d382aafbSBarry Smith 915d382aafbSBarry Smith /*MC 916d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 917d382aafbSBarry Smith 918eca87e8dSBarry Smith Synopsis: 919eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 920eca87e8dSBarry Smith 921eca87e8dSBarry Smith Not Collective 922eca87e8dSBarry Smith 923d382aafbSBarry Smith Input Parameter: 924d382aafbSBarry Smith + memory1 - memory to free 925d382aafbSBarry Smith . memory2 - 2nd memory to free 926d382aafbSBarry Smith - memory3 - 3rd memory to free 927d382aafbSBarry Smith 928d382aafbSBarry Smith Level: developer 929d382aafbSBarry Smith 930d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc3() 931d382aafbSBarry Smith 932d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 933d382aafbSBarry Smith 934d382aafbSBarry Smith Concepts: memory allocation 935d382aafbSBarry Smith 936d382aafbSBarry Smith M*/ 937d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 938d382aafbSBarry Smith #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 939d382aafbSBarry Smith #else 94081dabb53SJed Brown #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 941d382aafbSBarry Smith #endif 942d382aafbSBarry Smith 943d382aafbSBarry Smith /*MC 944d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 945d382aafbSBarry Smith 946eca87e8dSBarry Smith Synopsis: 947eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 948eca87e8dSBarry Smith 949eca87e8dSBarry Smith Not Collective 950eca87e8dSBarry Smith 951d382aafbSBarry Smith Input Parameter: 952d382aafbSBarry Smith + m1 - memory to free 953d382aafbSBarry Smith . m2 - 2nd memory to free 954d382aafbSBarry Smith . m3 - 3rd memory to free 955d382aafbSBarry Smith - m4 - 4th memory to free 956d382aafbSBarry Smith 957d382aafbSBarry Smith Level: developer 958d382aafbSBarry Smith 959d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc4() 960d382aafbSBarry Smith 961d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 962d382aafbSBarry Smith 963d382aafbSBarry Smith Concepts: memory allocation 964d382aafbSBarry Smith 965d382aafbSBarry Smith M*/ 966d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 967d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 968d382aafbSBarry Smith #else 96981dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 970d382aafbSBarry Smith #endif 971d382aafbSBarry Smith 972d382aafbSBarry Smith /*MC 973d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 974d382aafbSBarry Smith 975eca87e8dSBarry Smith Synopsis: 976eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 977eca87e8dSBarry Smith 978eca87e8dSBarry Smith Not Collective 979eca87e8dSBarry Smith 980d382aafbSBarry Smith Input Parameter: 981d382aafbSBarry Smith + m1 - memory to free 982d382aafbSBarry Smith . m2 - 2nd memory to free 983d382aafbSBarry Smith . m3 - 3rd memory to free 984d382aafbSBarry Smith . m4 - 4th memory to free 985d382aafbSBarry Smith - m5 - 5th memory to free 986d382aafbSBarry Smith 987d382aafbSBarry Smith Level: developer 988d382aafbSBarry Smith 989d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc5() 990d382aafbSBarry Smith 991d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 992d382aafbSBarry Smith 993d382aafbSBarry Smith Concepts: memory allocation 994d382aafbSBarry Smith 995d382aafbSBarry Smith M*/ 996d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 997d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 998d382aafbSBarry Smith #else 99981dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1000d382aafbSBarry Smith #endif 1001d382aafbSBarry Smith 1002d382aafbSBarry Smith 1003d382aafbSBarry Smith /*MC 1004d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1005d382aafbSBarry Smith 1006eca87e8dSBarry Smith Synopsis: 1007eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1008eca87e8dSBarry Smith 1009eca87e8dSBarry Smith Not Collective 1010eca87e8dSBarry Smith 1011d382aafbSBarry Smith Input Parameter: 1012d382aafbSBarry Smith + m1 - memory to free 1013d382aafbSBarry Smith . m2 - 2nd memory to free 1014d382aafbSBarry Smith . m3 - 3rd memory to free 1015d382aafbSBarry Smith . m4 - 4th memory to free 1016d382aafbSBarry Smith . m5 - 5th memory to free 1017d382aafbSBarry Smith - m6 - 6th memory to free 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith 1020d382aafbSBarry Smith Level: developer 1021d382aafbSBarry Smith 1022d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc6() 1023d382aafbSBarry Smith 1024d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1025d382aafbSBarry Smith 1026d382aafbSBarry Smith Concepts: memory allocation 1027d382aafbSBarry Smith 1028d382aafbSBarry Smith M*/ 1029d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1030d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1031d382aafbSBarry Smith #else 103281dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1033d382aafbSBarry Smith #endif 1034d382aafbSBarry Smith 1035d382aafbSBarry Smith /*MC 1036d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1037d382aafbSBarry Smith 1038eca87e8dSBarry Smith Synopsis: 1039eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1040eca87e8dSBarry Smith 1041eca87e8dSBarry Smith Not Collective 1042eca87e8dSBarry Smith 1043d382aafbSBarry Smith Input Parameter: 1044d382aafbSBarry Smith + m1 - memory to free 1045d382aafbSBarry Smith . m2 - 2nd memory to free 1046d382aafbSBarry Smith . m3 - 3rd memory to free 1047d382aafbSBarry Smith . m4 - 4th memory to free 1048d382aafbSBarry Smith . m5 - 5th memory to free 1049d382aafbSBarry Smith . m6 - 6th memory to free 1050d382aafbSBarry Smith - m7 - 7th memory to free 1051d382aafbSBarry Smith 1052d382aafbSBarry Smith 1053d382aafbSBarry Smith Level: developer 1054d382aafbSBarry Smith 1055d382aafbSBarry Smith Notes: Memory must have been obtained with PetscMalloc7() 1056d382aafbSBarry Smith 1057d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1058d382aafbSBarry Smith PetscMalloc7() 1059d382aafbSBarry Smith 1060d382aafbSBarry Smith Concepts: memory allocation 1061d382aafbSBarry Smith 1062d382aafbSBarry Smith M*/ 1063d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1064d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1065d382aafbSBarry Smith #else 106681dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1067d382aafbSBarry Smith #endif 1068d382aafbSBarry Smith 1069014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1070014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1071014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1072014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith /* 1075a5057860SBarry Smith PetscLogDouble variables are used to contain double precision numbers 1076a5057860SBarry Smith that are not used in the numerical computations, but rather in logging, 1077a5057860SBarry Smith timing etc. 1078a5057860SBarry Smith */ 1079a5057860SBarry Smith typedef double PetscLogDouble; 1080a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1081a5057860SBarry Smith 1082a5057860SBarry Smith /* 108366d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1084d382aafbSBarry Smith */ 1085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1086014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1087014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1089014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 1090014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]); 1091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1092014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1093d382aafbSBarry Smith 1094d382aafbSBarry Smith /*E 1095d382aafbSBarry Smith PetscDataType - Used for handling different basic data types. 1096d382aafbSBarry Smith 1097d382aafbSBarry Smith Level: beginner 1098d382aafbSBarry Smith 1099d382aafbSBarry Smith Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1100d382aafbSBarry Smith 1101d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1102d382aafbSBarry Smith PetscDataTypeGetSize() 1103d382aafbSBarry Smith 1104d382aafbSBarry Smith E*/ 1105d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 110659a34000SBarry Smith PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10} PetscDataType; 1107014dd563SJed Brown PETSC_EXTERN const char *PetscDataTypes[]; 1108d382aafbSBarry Smith 1109d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX) 1110d382aafbSBarry Smith #define PETSC_SCALAR PETSC_COMPLEX 1111d382aafbSBarry Smith #else 1112ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1113d382aafbSBarry Smith #define PETSC_SCALAR PETSC_FLOAT 111459a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 111559a34000SBarry Smith #define PETSC_SCALAR PETSC___FLOAT128 1116d382aafbSBarry Smith #else 1117d382aafbSBarry Smith #define PETSC_SCALAR PETSC_DOUBLE 1118d382aafbSBarry Smith #endif 1119d382aafbSBarry Smith #endif 1120ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE) 1121d382aafbSBarry Smith #define PETSC_REAL PETSC_FLOAT 112259a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128) 112359a34000SBarry Smith #define PETSC_REAL PETSC___FLOAT128 1124d382aafbSBarry Smith #else 1125d382aafbSBarry Smith #define PETSC_REAL PETSC_DOUBLE 1126d382aafbSBarry Smith #endif 1127d382aafbSBarry Smith #define PETSC_FORTRANADDR PETSC_LONG 1128d382aafbSBarry Smith 1129014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1130014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /* 1134d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1135d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1136d382aafbSBarry Smith functionality and/or error checking. 1137d382aafbSBarry Smith */ 1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***); 1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1156014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 116047340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11616fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 1162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1163d382aafbSBarry Smith 1164d382aafbSBarry Smith /*S 1165d382aafbSBarry Smith PetscToken - 'Token' used for managing tokenizing strings 1166d382aafbSBarry Smith 1167d382aafbSBarry Smith Level: intermediate 1168d382aafbSBarry Smith 1169d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1170d382aafbSBarry Smith S*/ 1171d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken; 1172d382aafbSBarry Smith 1173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith /* 1178d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1179d382aafbSBarry Smith */ 1180014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op; 11812414b3c7SJed Brown #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1182014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 11832414b3c7SJed Brown #else 11842414b3c7SJed Brown #define MPIU_SUM MPI_SUM 11852414b3c7SJed Brown #endif 11862414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128) 1187014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1188014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1189d9822059SBarry Smith #else 1190d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1191d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1192d9822059SBarry Smith #endif 1193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1194d382aafbSBarry Smith 1195014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1196014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1197eb3f98d2SBarry Smith 1198d382aafbSBarry Smith /*S 1199d382aafbSBarry Smith PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1200d382aafbSBarry Smith 1201d382aafbSBarry Smith Level: beginner 1202d382aafbSBarry Smith 12032981ebdbSBarry Smith Note: This is the base class from which all PETSc objects are derived from. 1204d382aafbSBarry Smith 12051890ba74SBarry Smith .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1206d382aafbSBarry Smith S*/ 1207d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject; 1208d382aafbSBarry Smith 1209d382aafbSBarry Smith /*S 1210d382aafbSBarry Smith PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1211d382aafbSBarry Smith by string name 1212d382aafbSBarry Smith 1213d382aafbSBarry Smith Level: advanced 1214d382aafbSBarry Smith 12152981ebdbSBarry Smith .seealso: PetscFListAdd(), PetscFListDestroy(), PetscOpFlist 1216d382aafbSBarry Smith S*/ 1217d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList; 1218d382aafbSBarry Smith 1219e4d1774bSDmitry Karpeev /*S 1220e4d1774bSDmitry Karpeev PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries, 1221e4d1774bSDmitry Karpeev accessed by string op name together with string argument types. 1222e4d1774bSDmitry Karpeev 1223e4d1774bSDmitry Karpeev Level: advanced 1224e4d1774bSDmitry Karpeev 12252981ebdbSBarry Smith .seealso: PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy() 1226e4d1774bSDmitry Karpeev S*/ 1227e4d1774bSDmitry Karpeev typedef struct _n_PetscOpFList *PetscOpFList; 1228e4d1774bSDmitry Karpeev 1229d382aafbSBarry Smith /*E 1230d382aafbSBarry Smith PetscFileMode - Access mode for a file. 1231d382aafbSBarry Smith 1232d382aafbSBarry Smith Level: beginner 1233d382aafbSBarry Smith 1234d382aafbSBarry Smith FILE_MODE_READ - open a file at its beginning for reading 1235d382aafbSBarry Smith 1236d382aafbSBarry Smith FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1237d382aafbSBarry Smith 1238d382aafbSBarry Smith FILE_MODE_APPEND - open a file at end for writing 1239d382aafbSBarry Smith 1240d382aafbSBarry Smith FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1241d382aafbSBarry Smith 1242d382aafbSBarry Smith FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1243d382aafbSBarry Smith 1244d382aafbSBarry Smith .seealso: PetscViewerFileSetMode() 1245d382aafbSBarry Smith E*/ 1246d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1247d382aafbSBarry Smith 1248d382aafbSBarry Smith #include "petscviewer.h" 1249d382aafbSBarry Smith #include "petscoptions.h" 1250d382aafbSBarry Smith 12510700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1252014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1253014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith /* 1257d382aafbSBarry Smith Routines that get memory usage information from the OS 1258d382aafbSBarry Smith */ 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1263d382aafbSBarry Smith 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1268d382aafbSBarry Smith 1269d382aafbSBarry Smith /* 1270d382aafbSBarry Smith Initialization of PETSc 1271d382aafbSBarry Smith */ 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1282d382aafbSBarry Smith 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]); 1285d382aafbSBarry Smith 1286014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD; 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt); 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**); 1294d382aafbSBarry Smith 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1299d382aafbSBarry Smith 1300d382aafbSBarry Smith /* 1301d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 13022981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1303d382aafbSBarry Smith */ 1304638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1305638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1306638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1307d382aafbSBarry Smith 1308d382aafbSBarry Smith /* 1309d382aafbSBarry Smith PetscTryMethod - Queries an object for a method, if it exists then calls it. 1310d382aafbSBarry Smith These are intended to be used only inside PETSc functions. 1311503cfb0cSBarry Smith 1312503cfb0cSBarry Smith Level: developer 1313503cfb0cSBarry Smith 1314503cfb0cSBarry Smith .seealso: PetscUseMethod() 1315d382aafbSBarry Smith */ 1316d382aafbSBarry Smith #define PetscTryMethod(obj,A,B,C) \ 1317d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1318d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1319d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1320d382aafbSBarry Smith } 1321503cfb0cSBarry Smith 1322503cfb0cSBarry Smith /* 1323503cfb0cSBarry Smith PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1324503cfb0cSBarry Smith These are intended to be used only inside PETSc functions. 1325503cfb0cSBarry Smith 1326503cfb0cSBarry Smith Level: developer 1327503cfb0cSBarry Smith 1328503cfb0cSBarry Smith .seealso: PetscTryMethod() 1329503cfb0cSBarry Smith */ 1330d382aafbSBarry Smith #define PetscUseMethod(obj,A,B,C) \ 1331d382aafbSBarry Smith 0;{ PetscErrorCode (*f)B, __ierr; \ 1332d382aafbSBarry Smith __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1333d382aafbSBarry Smith if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1334703c66c1SJed Brown else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1335d382aafbSBarry Smith } 1336503cfb0cSBarry Smith 1337d382aafbSBarry Smith /* 1338d382aafbSBarry Smith Functions that can act on any PETSc object. 1339d382aafbSBarry Smith */ 1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 1350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 1366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject); 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1369d382aafbSBarry Smith 1370d382aafbSBarry Smith /*MC 1371d382aafbSBarry Smith PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1372d382aafbSBarry Smith 1373eca87e8dSBarry Smith Synopsis: 1374eca87e8dSBarry Smith PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1375eca87e8dSBarry Smith 1376ad4df100SBarry Smith Logically Collective on PetscObject 1377d382aafbSBarry Smith 1378d382aafbSBarry Smith Input Parameters: 1379d382aafbSBarry Smith + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1380d382aafbSBarry Smith PetscObjectCompose((PetscObject)mat,...); 1381d382aafbSBarry Smith . name - name associated with the child function 1382d382aafbSBarry Smith . fname - name of the function 1383d382aafbSBarry Smith - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1384d382aafbSBarry Smith 1385d382aafbSBarry Smith Level: advanced 1386d382aafbSBarry Smith 1387d382aafbSBarry Smith 1388d382aafbSBarry Smith Notes: 1389d382aafbSBarry Smith To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1390d382aafbSBarry Smith 1391d382aafbSBarry Smith PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1392d382aafbSBarry Smith Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1393d382aafbSBarry Smith 1394d382aafbSBarry Smith The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 139520de1f94SBarry Smith work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1396d382aafbSBarry Smith enabled. 1397d382aafbSBarry Smith 1398d382aafbSBarry Smith Concepts: objects^composing functions 1399d382aafbSBarry Smith Concepts: composing functions 1400d382aafbSBarry Smith Concepts: functions^querying 1401d382aafbSBarry Smith Concepts: objects^querying 1402d382aafbSBarry Smith Concepts: querying objects 1403d382aafbSBarry Smith 1404d382aafbSBarry Smith .seealso: PetscObjectQueryFunction() 1405d382aafbSBarry Smith M*/ 1406d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1407d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1408d382aafbSBarry Smith #else 1409d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1410d382aafbSBarry Smith #endif 1411d382aafbSBarry Smith 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1417014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject); 1418014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject); 1419014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1427d382aafbSBarry Smith 1428d382aafbSBarry Smith /* 1429d382aafbSBarry Smith Defines PETSc error handling. 1430d382aafbSBarry Smith */ 1431d382aafbSBarry Smith #include "petscerror.h" 1432d382aafbSBarry Smith 1433d382aafbSBarry Smith /*S 1434503cfb0cSBarry Smith PetscOList - Linked list of PETSc objects, each accessable by string name 1435d382aafbSBarry Smith 14361d0fab5eSBarry Smith Level: developer 1437d382aafbSBarry Smith 14381d0fab5eSBarry Smith Notes: Used by PetscObjectCompose() and PetscObjectQuery() 14391d0fab5eSBarry Smith 14402981ebdbSBarry Smith .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList 1441d382aafbSBarry Smith S*/ 1442d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList; 1443d382aafbSBarry Smith 1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*); 1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*); 1446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*); 1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject); 1448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]); 1449014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *); 1450d382aafbSBarry Smith 1451d382aafbSBarry Smith /* 1452503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1453d382aafbSBarry Smith link libraries that will be loaded as needed. 1454d382aafbSBarry Smith */ 1455014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1456014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*); 1457014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void)); 1458014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1459d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1460d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1461d382aafbSBarry Smith #else 1462d382aafbSBarry Smith #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1463d382aafbSBarry Smith #endif 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*); 1468d382aafbSBarry Smith 146948703020SDmitry Karpeev /* 147048703020SDmitry Karpeev Multiple dispatch operation function lists. Lists of names of routines with corresponding 147148703020SDmitry Karpeev argument type names with function pointers or in dynamic link libraries that will be loaded 147248703020SDmitry Karpeev as needed. Search on the op name and argument type names. 147348703020SDmitry Karpeev */ 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*); 1476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]); 1477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer); 14782981ebdbSBarry Smith 1479d382aafbSBarry Smith /*S 1480d382aafbSBarry Smith PetscDLLibrary - Linked list of dynamics libraries to search for functions 1481d382aafbSBarry Smith 1482d382aafbSBarry Smith Level: advanced 1483d382aafbSBarry Smith 148420de1f94SBarry Smith --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1485d382aafbSBarry Smith 1486d382aafbSBarry Smith .seealso: PetscDLLibraryOpen() 1487d382aafbSBarry Smith S*/ 1488d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1489014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1497d382aafbSBarry Smith 1498d382aafbSBarry Smith /* 1499a5a3d712SDmitry Karpeev PetscShell support. Needs to be better documented. 150005846914SDmitry Karpeev Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 150105846914SDmitry Karpeev */ 1502a5a3d712SDmitry Karpeev #include "petscshell.h" 150305846914SDmitry Karpeev 150405846914SDmitry Karpeev /* 1505d382aafbSBarry Smith Useful utility routines 1506d382aafbSBarry Smith */ 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1513d382aafbSBarry Smith 1514503cfb0cSBarry Smith /* 1515ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1516503cfb0cSBarry Smith 1517503cfb0cSBarry Smith Notes: This is useful in cases like 1518503cfb0cSBarry Smith $ int *a; 1519ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 1520ace3abfcSBarry Smith where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1521503cfb0cSBarry Smith */ 1522d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1523503cfb0cSBarry Smith 1524d382aafbSBarry Smith /* 1525d382aafbSBarry Smith Defines basic graphics available from PETSc. 1526d382aafbSBarry Smith */ 1527d382aafbSBarry Smith #include "petscdraw.h" 1528d382aafbSBarry Smith 1529d382aafbSBarry Smith /* 1530d382aafbSBarry Smith Defines the base data structures for all PETSc objects 1531d382aafbSBarry Smith */ 1532b45d2f2cSJed Brown #include "petsc-private/petscimpl.h" 1533503cfb0cSBarry Smith 1534238ccf28SShri Abhyankar 1535d382aafbSBarry Smith /*MC 1536d382aafbSBarry Smith PetscErrorPrintf - Prints error messages. 1537d382aafbSBarry Smith 1538d382aafbSBarry Smith Synopsis: 1539d382aafbSBarry Smith PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1540d382aafbSBarry Smith 1541eca87e8dSBarry Smith Not Collective 1542eca87e8dSBarry Smith 1543d382aafbSBarry Smith Input Parameters: 1544d382aafbSBarry Smith . format - the usual printf() format string 1545d382aafbSBarry Smith 1546d382aafbSBarry Smith Options Database Keys: 1547d382aafbSBarry Smith + -error_output_stdout - cause error messages to be printed to stdout instead of the 1548d382aafbSBarry Smith (default) stderr 1549d382aafbSBarry Smith - -error_output_none to turn off all printing of error messages (does not change the way the 1550d382aafbSBarry Smith error is handled.) 1551d382aafbSBarry Smith 1552d382aafbSBarry Smith Notes: Use 1553d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1554d382aafbSBarry Smith $ error is handled.) and 1555d382aafbSBarry Smith $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1556c9a19010SBarry Smith $ of you can use your own function 1557d382aafbSBarry Smith 1558d382aafbSBarry Smith Use 1559d382aafbSBarry Smith PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1560d382aafbSBarry Smith PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1561d382aafbSBarry Smith 1562d382aafbSBarry Smith Use 1563d382aafbSBarry Smith PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1564d382aafbSBarry Smith 1565d382aafbSBarry Smith Level: developer 1566d382aafbSBarry Smith 1567d382aafbSBarry Smith Fortran Note: 1568d382aafbSBarry Smith This routine is not supported in Fortran. 1569d382aafbSBarry Smith 1570d382aafbSBarry Smith Concepts: error messages^printing 1571d382aafbSBarry Smith Concepts: printing^error messages 1572d382aafbSBarry Smith 1573c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1574d382aafbSBarry Smith M*/ 1575014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1576d382aafbSBarry Smith 1577d382aafbSBarry Smith /*MC 1578d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Synopsis: 1581d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1582d382aafbSBarry Smith 1583eca87e8dSBarry Smith Not Collective 1584eca87e8dSBarry Smith 1585d382aafbSBarry Smith Input Parameters: 1586d382aafbSBarry Smith . format - the usual printf() format string 1587d382aafbSBarry Smith 1588d382aafbSBarry Smith Level: developer 1589d382aafbSBarry Smith 1590d382aafbSBarry Smith Fortran Note: 1591d382aafbSBarry Smith This routine is not supported in Fortran. 1592d382aafbSBarry Smith 1593d382aafbSBarry Smith Concepts: help messages^printing 1594d382aafbSBarry Smith Concepts: printing^help messages 1595d382aafbSBarry Smith 1596d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1597d382aafbSBarry Smith M*/ 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1599d382aafbSBarry Smith 1600fcfd50ebSBarry Smith /* 1601fcfd50ebSBarry Smith Defines PETSc profiling. 1602fcfd50ebSBarry Smith */ 1603fcfd50ebSBarry Smith #include "petsclog.h" 1604fcfd50ebSBarry Smith 1605fcfd50ebSBarry Smith /* 1606fcfd50ebSBarry Smith For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1607fcfd50ebSBarry Smith */ 1608fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS) 1609014dd563SJed Brown PETSC_EXTERN PetscBool PetscAMSPublishAll; 1610fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1611fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1612fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1613fcfd50ebSBarry Smith #else 1614fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj) 0 1615fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) 0 1616fcfd50ebSBarry Smith #define PetscObjectDepublish(obj) 0 1617fcfd50ebSBarry Smith #endif 1618fcfd50ebSBarry Smith 1619fcfd50ebSBarry Smith /* 1620fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1621fcfd50ebSBarry Smith */ 1622014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1623014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1624014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1625014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1626014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1627014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1628014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1629fcfd50ebSBarry Smith 1630fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/ 1631fcfd50ebSBarry Smith #include <stdarg.h> 1632014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1633014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1634014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1635fcfd50ebSBarry Smith 1636fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE) 1637014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1638fcfd50ebSBarry Smith #endif 1639fcfd50ebSBarry Smith 1640014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1641014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1642014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1643d382aafbSBarry Smith 1644d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1645014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1646014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 1647d382aafbSBarry Smith #endif 1648d382aafbSBarry Smith 1649014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1650014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 1651014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm); 1652014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1653014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1654014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1655014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1656d382aafbSBarry Smith 1657014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1658d382aafbSBarry Smith 1659d382aafbSBarry Smith /*S 1660d382aafbSBarry Smith PetscContainer - Simple PETSc object that contains a pointer to any required data 1661d382aafbSBarry Smith 1662d382aafbSBarry Smith Level: advanced 1663d382aafbSBarry Smith 1664d382aafbSBarry Smith .seealso: PetscObject, PetscContainerCreate() 1665d382aafbSBarry Smith S*/ 1666014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1667d382aafbSBarry Smith typedef struct _p_PetscContainer* PetscContainer; 1668014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1669014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1670014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1671014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1672014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1673d382aafbSBarry Smith 1674d382aafbSBarry Smith /* 1675d382aafbSBarry Smith For use in debuggers 1676d382aafbSBarry Smith */ 1677014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1678014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1679014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1680014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1681014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1682d382aafbSBarry Smith 1683d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H) 1684d382aafbSBarry Smith #include <memory.h> 1685d382aafbSBarry Smith #endif 1686d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1687d382aafbSBarry Smith #include <stdlib.h> 1688d382aafbSBarry Smith #endif 1689d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H) 1690d382aafbSBarry Smith #include <strings.h> 1691d382aafbSBarry Smith #endif 1692d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H) 1693d382aafbSBarry Smith #include <string.h> 1694d382aafbSBarry Smith #endif 16956c7e564aSBarry Smith 16964a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1697d382aafbSBarry Smith #include <xmmintrin.h> 1698d382aafbSBarry Smith #endif 1699d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H) 1700d382aafbSBarry Smith #include <stdint.h> 1701d382aafbSBarry Smith #endif 1702d382aafbSBarry Smith 1703fcfd50ebSBarry Smith #undef __FUNCT__ 1704fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy" 1705d382aafbSBarry Smith /*@C 1706d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1707d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1708d382aafbSBarry Smith PetscMemmove() in that case. 1709d382aafbSBarry Smith 1710d382aafbSBarry Smith Not Collective 1711d382aafbSBarry Smith 1712d382aafbSBarry Smith Input Parameters: 1713d382aafbSBarry Smith + b - pointer to initial memory space 1714d382aafbSBarry Smith - n - length (in bytes) of space to copy 1715d382aafbSBarry Smith 1716d382aafbSBarry Smith Output Parameter: 1717d382aafbSBarry Smith . a - pointer to copy space 1718d382aafbSBarry Smith 1719d382aafbSBarry Smith Level: intermediate 1720d382aafbSBarry Smith 1721d382aafbSBarry Smith Compile Option: 1722d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1723d382aafbSBarry Smith for memory copies on double precision values. 1724d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1725d382aafbSBarry Smith for memory copies on double precision values. 1726d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1727d382aafbSBarry Smith for memory copies on double precision values. 1728d382aafbSBarry Smith 1729d382aafbSBarry Smith Note: 1730d382aafbSBarry Smith This routine is analogous to memcpy(). 1731d382aafbSBarry Smith 1732503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1733503cfb0cSBarry Smith 1734d382aafbSBarry Smith Concepts: memory^copying 1735d382aafbSBarry Smith Concepts: copying^memory 1736d382aafbSBarry Smith 1737d382aafbSBarry Smith .seealso: PetscMemmove() 1738d382aafbSBarry Smith 1739d382aafbSBarry Smith @*/ 17407087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1741d382aafbSBarry Smith { 1742d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1743d382aafbSBarry Smith unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1744d382aafbSBarry Smith unsigned long nl = (unsigned long) n; 1745a7e36092SMatthew G Knepley PetscFunctionBegin; 1746e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1747e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1748a7e36092SMatthew G Knepley #else 1749d382aafbSBarry Smith PetscFunctionBegin; 1750a7e36092SMatthew G Knepley #endif 1751d382aafbSBarry Smith if (a != b) { 1752d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1753e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1754d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1755d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1756d382aafbSBarry Smith #endif 1757d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1758d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1759d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1760d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1761d382aafbSBarry Smith PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1762d382aafbSBarry Smith BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1763d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1764d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1765d382aafbSBarry Smith #else 1766d382aafbSBarry Smith size_t i; 1767d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1768d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1769d382aafbSBarry Smith #endif 1770d382aafbSBarry Smith } else { 1771d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1772d382aafbSBarry Smith } 1773d382aafbSBarry Smith #else 1774d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1775d382aafbSBarry Smith #endif 1776d382aafbSBarry Smith } 1777d382aafbSBarry Smith PetscFunctionReturn(0); 1778d382aafbSBarry Smith } 1779d382aafbSBarry Smith 1780d382aafbSBarry Smith /*@C 1781d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1782d382aafbSBarry Smith 1783d382aafbSBarry Smith Not Collective 1784d382aafbSBarry Smith 1785d382aafbSBarry Smith Input Parameters: 1786d382aafbSBarry Smith + a - pointer to beginning memory location 1787d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1788d382aafbSBarry Smith 1789d382aafbSBarry Smith Level: intermediate 1790d382aafbSBarry Smith 1791d382aafbSBarry Smith Compile Option: 1792d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1793d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1794d382aafbSBarry Smith 1795503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1796503cfb0cSBarry Smith 1797d382aafbSBarry Smith Concepts: memory^zeroing 1798d382aafbSBarry Smith Concepts: zeroing^memory 1799d382aafbSBarry Smith 1800d382aafbSBarry Smith .seealso: PetscMemcpy() 1801d382aafbSBarry Smith @*/ 18027087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1803d382aafbSBarry Smith { 1804d382aafbSBarry Smith if (n > 0) { 1805d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1806e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1807d382aafbSBarry Smith #endif 1808d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1809d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1810d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1811d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1812d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1813d382aafbSBarry Smith } else { 1814d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1815d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1816d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1817d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1818d382aafbSBarry Smith } else { 1819d382aafbSBarry Smith #endif 1820d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1821d382aafbSBarry Smith bzero((char *)a,n); 1822d382aafbSBarry Smith #else 1823d382aafbSBarry Smith memset((char*)a,0,n); 1824d382aafbSBarry Smith #endif 1825d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1826d382aafbSBarry Smith } 1827d382aafbSBarry Smith #endif 1828d382aafbSBarry Smith } 1829d382aafbSBarry Smith return 0; 1830d382aafbSBarry Smith } 1831d382aafbSBarry Smith 1832d382aafbSBarry Smith /*MC 1833d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1834d382aafbSBarry Smith 1835eca87e8dSBarry Smith Synopsis: 1836eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1837eca87e8dSBarry Smith 1838d382aafbSBarry Smith Not Collective 1839d382aafbSBarry Smith 1840d382aafbSBarry Smith Input Parameters: 1841d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1842d382aafbSBarry Smith . n - number of elements to fetch 1843d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 184450d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1845d382aafbSBarry Smith 1846d382aafbSBarry Smith Level: developer 1847d382aafbSBarry Smith 1848d382aafbSBarry Smith Notes: 1849d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1850d382aafbSBarry Smith 185150d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 185250d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 185350d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 185463cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 185563cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 185663cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1857d382aafbSBarry Smith 1858d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1859d382aafbSBarry Smith address). 1860d382aafbSBarry Smith 1861d382aafbSBarry Smith Concepts: memory 1862d382aafbSBarry Smith M*/ 1863d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1864d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1865d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1866d382aafbSBarry Smith } while (0) 1867d382aafbSBarry Smith 1868d382aafbSBarry Smith /* 1869e3c5b3baSBarry Smith Allows accessing MATLAB Engine 1870d382aafbSBarry Smith */ 1871d382aafbSBarry Smith #include "petscmatlab.h" 1872d382aafbSBarry Smith 1873d382aafbSBarry Smith /* 1874d382aafbSBarry Smith Determine if some of the kernel computation routines use 1875d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1876d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1877d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1878e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1879d382aafbSBarry Smith */ 1880d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1881d382aafbSBarry Smith 1882d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1883d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1884d382aafbSBarry Smith #endif 1885d382aafbSBarry Smith 18865a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18875a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1888d382aafbSBarry Smith #endif 1889d382aafbSBarry Smith 1890d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1891d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1892d382aafbSBarry Smith #endif 1893d382aafbSBarry Smith 1894d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1895d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1896d382aafbSBarry Smith #endif 1897d382aafbSBarry Smith 1898d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1899d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1900d382aafbSBarry Smith #endif 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1903d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1904d382aafbSBarry Smith #endif 1905d382aafbSBarry Smith 1906d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1907d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1908d382aafbSBarry Smith #endif 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1911d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1912d382aafbSBarry Smith #endif 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1915d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1916d382aafbSBarry Smith #endif 1917d382aafbSBarry Smith 1918d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1919d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1920d382aafbSBarry Smith #endif 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1923d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1924d382aafbSBarry Smith #endif 1925d382aafbSBarry Smith 1926d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1927d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1928d382aafbSBarry Smith #endif 1929d382aafbSBarry Smith 1930d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1931d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1932d382aafbSBarry Smith #endif 1933d382aafbSBarry Smith 1934d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1935d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1936d382aafbSBarry Smith #endif 1937d382aafbSBarry Smith 1938d382aafbSBarry Smith #endif 1939d382aafbSBarry Smith 1940d382aafbSBarry Smith /* 1941d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1942d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1943d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1944d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1945d382aafbSBarry Smith ugly extern "C" {} wrappers. 1946d382aafbSBarry Smith */ 1947d382aafbSBarry Smith #if defined(__cplusplus) 1948014dd563SJed Brown #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC 1949d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" { 1950d382aafbSBarry Smith #define EXTERN_C_END } 1951d382aafbSBarry Smith #else 1952014dd563SJed Brown #define PETSC_EXTERN_C PETSC_EXTERN 1953d382aafbSBarry Smith #define EXTERN_C_BEGIN 1954d382aafbSBarry Smith #define EXTERN_C_END 1955d382aafbSBarry Smith #endif 1956d382aafbSBarry Smith 1957d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1958d382aafbSBarry Smith 1959d382aafbSBarry Smith /*MC 1960d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1961d382aafbSBarry Smith communication 1962d382aafbSBarry Smith 1963d382aafbSBarry Smith Level: beginner 1964d382aafbSBarry Smith 1965d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1966d382aafbSBarry Smith 1967d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1968d382aafbSBarry Smith M*/ 1969d382aafbSBarry Smith 1970d382aafbSBarry Smith /*MC 1971d382aafbSBarry Smith PetscScalar - PETSc type that represents either a double precision real number, a double precision 1972d382aafbSBarry Smith complex number, a single precision real number, a long double or an int - if the code is configured 1973d382aafbSBarry Smith with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1974d382aafbSBarry Smith 1975d382aafbSBarry Smith 1976d382aafbSBarry Smith Level: beginner 1977d382aafbSBarry Smith 1978d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1979d382aafbSBarry Smith M*/ 1980d382aafbSBarry Smith 1981d382aafbSBarry Smith /*MC 1982d382aafbSBarry Smith PetscReal - PETSc type that represents a real number version of PetscScalar 1983d382aafbSBarry Smith 1984d382aafbSBarry Smith Level: beginner 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar 1987d382aafbSBarry Smith M*/ 1988d382aafbSBarry Smith 1989d382aafbSBarry Smith /*MC 1990d382aafbSBarry Smith PassiveScalar - PETSc type that represents a PetscScalar 1991d382aafbSBarry Smith Level: beginner 1992d382aafbSBarry Smith 1993d382aafbSBarry Smith This is the same as a PetscScalar except in code that is automatically differentiated it is 1994d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar 1997d382aafbSBarry Smith M*/ 1998d382aafbSBarry Smith 1999d382aafbSBarry Smith /*MC 2000d382aafbSBarry Smith PassiveReal - PETSc type that represents a PetscReal 2001d382aafbSBarry Smith 2002d382aafbSBarry Smith Level: beginner 2003d382aafbSBarry Smith 2004d382aafbSBarry Smith This is the same as a PetscReal except in code that is automatically differentiated it is 2005d382aafbSBarry Smith treated as a constant (not an indendent or dependent variable) 2006d382aafbSBarry Smith 2007d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar 2008d382aafbSBarry Smith M*/ 2009d382aafbSBarry Smith 2010d382aafbSBarry Smith /*MC 2011d382aafbSBarry Smith MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith Level: beginner 2014d382aafbSBarry Smith 2015d382aafbSBarry Smith Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2016d382aafbSBarry Smith pass this value 2017d382aafbSBarry Smith 2018d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2019d382aafbSBarry Smith M*/ 2020d382aafbSBarry Smith 2021d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2022d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN) 2023014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2024014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2025d382aafbSBarry Smith #else 2026d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2027d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2028d382aafbSBarry Smith #endif 2029d382aafbSBarry Smith #endif 2030d382aafbSBarry Smith 2031d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2032d382aafbSBarry Smith 2033d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2034d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2035d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2036d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2037d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2038d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2039d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2040d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX 2147483647 2041d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647 2042d382aafbSBarry Smith 2043d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 2044e32f2f54SBarry Smith #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2045e32f2f54SBarry Smith #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2046eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a) 2047eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a) 2048d382aafbSBarry Smith 2049d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4) 2050e32f2f54SBarry Smith #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2051eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a) 2052d382aafbSBarry Smith #else 2053d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2054d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2055d382aafbSBarry Smith #endif 2056d382aafbSBarry Smith 2057d382aafbSBarry Smith #else 2058d382aafbSBarry Smith #define PetscMPIIntCheck(a) 2059d382aafbSBarry Smith #define PetscBLASIntCheck(a) 2060d382aafbSBarry Smith #define PetscHDF5IntCheck(a) 2061d382aafbSBarry Smith #define PetscMPIIntCast(a) a 2062d382aafbSBarry Smith #define PetscBLASIntCast(a) a 2063d382aafbSBarry Smith #define PetscHDF5IntCast(a) a 2064d382aafbSBarry Smith #endif 2065d382aafbSBarry Smith 2066d382aafbSBarry Smith /* 20672981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2068d382aafbSBarry Smith */ 2069d382aafbSBarry Smith #if defined(hz) 2070d382aafbSBarry Smith #undef hz 2071d382aafbSBarry Smith #endif 2072d382aafbSBarry Smith 2073d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2074d382aafbSBarry Smith 2075d382aafbSBarry Smith 2076d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H) 2077d382aafbSBarry Smith #include <limits.h> 2078d382aafbSBarry Smith #endif 2079d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2080d382aafbSBarry Smith #include <sys/param.h> 2081d382aafbSBarry Smith #endif 2082d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2083d382aafbSBarry Smith #include <sys/types.h> 2084d382aafbSBarry Smith #endif 2085d382aafbSBarry Smith #if defined(MAXPATHLEN) 2086d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2087d382aafbSBarry Smith #elif defined(MAX_PATH) 2088d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2089d382aafbSBarry Smith #elif defined(_MAX_PATH) 2090d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2091d382aafbSBarry Smith #else 2092d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2093d382aafbSBarry Smith #endif 2094d382aafbSBarry Smith 2095d382aafbSBarry Smith /* Special support for C++ */ 2096d382aafbSBarry Smith #include "petscsys.hh" 20976c7e564aSBarry Smith 2098d382aafbSBarry Smith /*MC 2099d382aafbSBarry Smith 2100d382aafbSBarry Smith UsingFortran - Fortran can be used with PETSc in four distinct approaches 2101d382aafbSBarry Smith 2102d382aafbSBarry Smith $ 1) classic Fortran 77 style 2103d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2104d382aafbSBarry Smith $ XXX variablename 2105d382aafbSBarry Smith $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2106d382aafbSBarry Smith $ which end in F90; such as VecGetArrayF90() 2107d382aafbSBarry Smith $ 2108d382aafbSBarry Smith $ 2) classic Fortran 90 style 2109d1716517SSatish Balay $#include "finclude/petscXXX.h" 2110d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2111d382aafbSBarry Smith $ XXX variablename 2112d382aafbSBarry Smith $ 2113d382aafbSBarry Smith $ 3) Using Fortran modules 2114d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2115d382aafbSBarry Smith $ use petscXXXX 2116d382aafbSBarry Smith $ XXX variablename 2117d382aafbSBarry Smith $ 2118d382aafbSBarry Smith $ 4) Use Fortran modules and Fortran data types for PETSc types 2119d1716517SSatish Balay $#include "finclude/petscXXXdef.h" 2120d382aafbSBarry Smith $ use petscXXXX 2121d382aafbSBarry Smith $ type(XXX) variablename 2122e2e64c6bSBarry Smith $ To use this approach you must ./configure PETSc with the additional 2123d382aafbSBarry Smith $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2124d382aafbSBarry Smith 2125d382aafbSBarry Smith Finally if you absolutely do not want to use any #include you can use either 2126d382aafbSBarry Smith 2127d382aafbSBarry Smith $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2128d382aafbSBarry Smith $ and you must declare the variables as integer, for example 2129d382aafbSBarry Smith $ integer variablename 2130d382aafbSBarry Smith $ 2131d382aafbSBarry Smith $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2132d382aafbSBarry Smith $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2133d382aafbSBarry Smith 2134d382aafbSBarry Smith We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2135d382aafbSBarry Smith for only a few PETSc functions. 2136d382aafbSBarry Smith 2137d382aafbSBarry Smith Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2138d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2139d382aafbSBarry Smith you cannot have something like 2140d382aafbSBarry Smith $ PetscInt row,col 2141d382aafbSBarry Smith $ PetscScalar val 2142d382aafbSBarry Smith $ ... 2143d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2144d382aafbSBarry Smith You must instead have 2145d382aafbSBarry Smith $ PetscInt row(1),col(1) 2146d382aafbSBarry Smith $ PetscScalar val(1) 2147d382aafbSBarry Smith $ ... 2148d382aafbSBarry Smith $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2149d382aafbSBarry Smith 2150d382aafbSBarry Smith 2151d382aafbSBarry Smith See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2152d382aafbSBarry Smith 2153d382aafbSBarry Smith Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2154d382aafbSBarry Smith automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2155d382aafbSBarry Smith 2156d382aafbSBarry Smith The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2157d382aafbSBarry Smith their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2158d382aafbSBarry Smith finclude/petscvec.h does NOT automatically include finclude/petscis.h 2159d382aafbSBarry Smith 2160d382aafbSBarry Smith The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2161e2e64c6bSBarry Smith Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2162d382aafbSBarry Smith 2163d382aafbSBarry Smith The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2164d382aafbSBarry Smith the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2165d382aafbSBarry Smith 2166d382aafbSBarry Smith The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2167d382aafbSBarry Smith automatically by "make allfortranstubs". 2168d382aafbSBarry Smith 2169e2e64c6bSBarry Smith The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2170d382aafbSBarry Smith was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2171d382aafbSBarry Smith include their predecessors 2172d382aafbSBarry Smith 2173d382aafbSBarry Smith Level: beginner 2174d382aafbSBarry Smith 2175d382aafbSBarry Smith M*/ 2176d382aafbSBarry Smith 2177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 2183d382aafbSBarry Smith 2184014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2188014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 2190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 2198d382aafbSBarry Smith 2199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2201d382aafbSBarry Smith 220276bdecfbSBarry Smith /*J 2203d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2204d382aafbSBarry Smith with an optional dynamic library name, for example 2205d382aafbSBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2206d382aafbSBarry Smith 2207d382aafbSBarry Smith Level: beginner 2208d382aafbSBarry Smith 2209e2e64c6bSBarry Smith Notes: to use the SPRNG you must have ./configure PETSc 2210d382aafbSBarry Smith with the option --download-sprng 2211d382aafbSBarry Smith 2212d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom 221376bdecfbSBarry Smith J*/ 2214d382aafbSBarry Smith #define PetscRandomType char* 2215d382aafbSBarry Smith #define PETSCRAND "rand" 2216d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2217d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2218d382aafbSBarry Smith 2219d382aafbSBarry Smith /* Logging support */ 2220014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2221d382aafbSBarry Smith 2222014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]); 2223d382aafbSBarry Smith 2224d382aafbSBarry Smith /*S 2225d382aafbSBarry Smith PetscRandom - Abstract PETSc object that manages generating random numbers 2226d382aafbSBarry Smith 2227d382aafbSBarry Smith Level: intermediate 2228d382aafbSBarry Smith 2229d382aafbSBarry Smith Concepts: random numbers 2230d382aafbSBarry Smith 2231d382aafbSBarry Smith .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2232d382aafbSBarry Smith S*/ 2233d382aafbSBarry Smith typedef struct _p_PetscRandom* PetscRandom; 2234d382aafbSBarry Smith 2235d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2236014dd563SJed Brown PETSC_EXTERN PetscFList PetscRandomList; 2237014dd563SJed Brown PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled; 2238d382aafbSBarry Smith 2239014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []); 2240014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2241014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void); 2242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType); 2243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 2244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*); 2245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*); 2246014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2247d382aafbSBarry Smith 2248d382aafbSBarry Smith /*MC 2249d382aafbSBarry Smith PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2250d382aafbSBarry Smith 2251d382aafbSBarry Smith Synopsis: 22521890ba74SBarry Smith PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2253d382aafbSBarry Smith 2254d382aafbSBarry Smith Not Collective 2255d382aafbSBarry Smith 2256d382aafbSBarry Smith Input Parameters: 2257d382aafbSBarry Smith + name - The name of a new user-defined creation routine 2258d382aafbSBarry Smith . path - The path (either absolute or relative) of the library containing this routine 2259d382aafbSBarry Smith . func_name - The name of routine to create method context 2260d382aafbSBarry Smith - create_func - The creation routine itself 2261d382aafbSBarry Smith 2262d382aafbSBarry Smith Notes: 2263d382aafbSBarry Smith PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2264d382aafbSBarry Smith 2265d382aafbSBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2266d382aafbSBarry Smith 2267d382aafbSBarry Smith Sample usage: 2268d382aafbSBarry Smith .vb 2269d382aafbSBarry Smith PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2270d382aafbSBarry Smith .ve 2271d382aafbSBarry Smith 2272d382aafbSBarry Smith Then, your random type can be chosen with the procedural interface via 2273d382aafbSBarry Smith .vb 2274d382aafbSBarry Smith PetscRandomCreate(MPI_Comm, PetscRandom *); 2275d382aafbSBarry Smith PetscRandomSetType(PetscRandom,"my_random_name"); 2276d382aafbSBarry Smith .ve 2277d382aafbSBarry Smith or at runtime via the option 2278d382aafbSBarry Smith .vb 2279d382aafbSBarry Smith -random_type my_random_name 2280d382aafbSBarry Smith .ve 2281d382aafbSBarry Smith 2282d382aafbSBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2283d382aafbSBarry Smith 2284d382aafbSBarry Smith For an example of the code needed to interface your own random number generator see 2285d382aafbSBarry Smith src/sys/random/impls/rand/rand.c 2286d382aafbSBarry Smith 2287d382aafbSBarry Smith Level: advanced 2288d382aafbSBarry Smith 2289d382aafbSBarry Smith .keywords: PetscRandom, register 2290d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2291d382aafbSBarry Smith M*/ 2292d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2293d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2294d382aafbSBarry Smith #else 2295d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2296d382aafbSBarry Smith #endif 2297d382aafbSBarry Smith 2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2307d382aafbSBarry Smith 2308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2315d382aafbSBarry Smith 2316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2321014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*); 2328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int); 2329d382aafbSBarry Smith 2330d382aafbSBarry Smith /* 2331d382aafbSBarry Smith In binary files variables are stored using the following lengths, 2332d382aafbSBarry Smith regardless of how they are stored in memory on any one particular 2333d382aafbSBarry Smith machine. Use these rather then sizeof() in computing sizes for 2334d382aafbSBarry Smith PetscBinarySeek(). 2335d382aafbSBarry Smith */ 2336d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE (32/8) 2337d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE (32/8) 2338d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE (8/8) 2339d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE (16/8) 2340d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2341d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2342d382aafbSBarry Smith 2343d382aafbSBarry Smith /*E 2344d382aafbSBarry Smith PetscBinarySeekType - argument to PetscBinarySeek() 2345d382aafbSBarry Smith 2346d382aafbSBarry Smith Level: advanced 2347d382aafbSBarry Smith 2348d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2349d382aafbSBarry Smith E*/ 2350d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2354d382aafbSBarry Smith 2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2361d382aafbSBarry Smith 2362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2363014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2366014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2367d382aafbSBarry Smith 2368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2369d382aafbSBarry Smith 2370d382aafbSBarry Smith /*E 2371d382aafbSBarry Smith InsertMode - Whether entries are inserted or added into vectors or matrices 2372d382aafbSBarry Smith 2373d382aafbSBarry Smith Level: beginner 2374d382aafbSBarry Smith 2375d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2376d382aafbSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2377d382aafbSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2378d382aafbSBarry Smith E*/ 237911f088b5SMatthew G Knepley typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode; 2380d382aafbSBarry Smith 2381d382aafbSBarry Smith /*MC 2382d382aafbSBarry Smith INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2383d382aafbSBarry Smith 2384d382aafbSBarry Smith Level: beginner 2385d382aafbSBarry Smith 2386d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2387eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2388eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2389d382aafbSBarry Smith 2390d382aafbSBarry Smith M*/ 2391d382aafbSBarry Smith 2392d382aafbSBarry Smith /*MC 2393d382aafbSBarry Smith ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2394d382aafbSBarry Smith value into that location 2395d382aafbSBarry Smith 2396d382aafbSBarry Smith Level: beginner 2397d382aafbSBarry Smith 2398d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2399eca87e8dSBarry Smith VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2400eca87e8dSBarry Smith MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2401d382aafbSBarry Smith 2402d382aafbSBarry Smith M*/ 2403d382aafbSBarry Smith 2404d382aafbSBarry Smith /*MC 2405d382aafbSBarry Smith MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2406d382aafbSBarry Smith 2407d382aafbSBarry Smith Level: beginner 2408d382aafbSBarry Smith 2409d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2410d382aafbSBarry Smith 2411d382aafbSBarry Smith M*/ 2412d382aafbSBarry Smith 2413d382aafbSBarry Smith /*S 2414d382aafbSBarry Smith PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2415d382aafbSBarry Smith 2416d382aafbSBarry Smith Level: advanced 2417d382aafbSBarry Smith 2418d382aafbSBarry Smith Concepts: communicator, create 2419d382aafbSBarry Smith S*/ 2420d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm; 2421d382aafbSBarry Smith 2422d382aafbSBarry Smith struct _n_PetscSubcomm { 2423d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2424d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2425d382aafbSBarry Smith MPI_Comm comm; /* this communicator */ 2426d382aafbSBarry Smith PetscInt n; /* num of subcommunicators under the parent communicator */ 2427d382aafbSBarry Smith PetscInt color; /* color of processors belong to this communicator */ 2428d382aafbSBarry Smith }; 2429d382aafbSBarry Smith 2430638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2431014dd563SJed Brown PETSC_EXTERN const char *PetscSubcommTypes[]; 2432638faf0bSHong Zhang 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2438d382aafbSBarry Smith 243982a7e548SBarry Smith #include <petscctable.h> 244082a7e548SBarry Smith 24416c7e564aSBarry Smith 24429e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */ 24439e03d832SJed Brown #undef __FUNCT__ 24449e03d832SJed Brown #define __FUNCT__ "User provided function" 24459e03d832SJed Brown 2446d382aafbSBarry Smith #endif 2447