1e68ebbecSBarry Smith#!/usr/bin/env python 2e68ebbecSBarry Smith 3e68ebbecSBarry Smith""" 465a891e7SLisandro DalcinPETSc: Portable, Extensible Toolkit for Scientific Computation 565a891e7SLisandro Dalcin============================================================== 665a891e7SLisandro Dalcin 765a891e7SLisandro DalcinThe Portable, Extensible Toolkit for Scientific Computation (PETSc), 865a891e7SLisandro Dalcinis a suite of data structures and routines for the scalable (parallel) 965a891e7SLisandro Dalcinsolution of scientific applications modeled by partial differential 1065a891e7SLisandro Dalcinequations. It employs the Message Passing Interface (MPI) standard for 1165a891e7SLisandro Dalcinall message-passing communication. 12922ada92SLisandro Dalcin 13922ada92SLisandro Dalcin.. tip:: 14922ada92SLisandro Dalcin 15eb1799d5SSatish Balay You can also install `petsc-master`_ with:: 16922ada92SLisandro Dalcin 17eb1799d5SSatish Balay $ pip install petsc==master 18922ada92SLisandro Dalcin 19eb1799d5SSatish Balay .. _petsc-master: https://bitbucket.org/petsc/ 20eb1799d5SSatish Balay petsc/get/master.tar.gz#egg=petsc-master 21e68ebbecSBarry Smith""" 22e68ebbecSBarry Smith 2365a891e7SLisandro Dalcinimport sys, os 2465a891e7SLisandro Dalcinfrom distutils.core import setup 25cb58ab5bSLisandro Dalcinfrom distutils.util import get_platform, split_quoted 26b88f8b63SLisandro Dalcinfrom distutils.spawn import find_executable 2765a891e7SLisandro Dalcinfrom distutils.command.build import build as _build 2865a891e7SLisandro Dalcinif 'setuptools' in sys.modules: 2965a891e7SLisandro Dalcin from setuptools.command.install import install as _install 3065a891e7SLisandro Dalcinelse: 3165a891e7SLisandro Dalcin from distutils.command.install import install as _install 32a32381aeSLisandro Dalcinfrom distutils.command.sdist import sdist as _sdist 3365a891e7SLisandro Dalcinfrom distutils import log 3412c1d45bSMatthew G Knepley 3565a891e7SLisandro Dalcininit_py = """\ 36a32381aeSLisandro Dalcin# Author: PETSc Team 37a597b971SLisandro Dalcin# Contact: petsc-maint@mcs.anl.gov 3865a891e7SLisandro Dalcin 3965a891e7SLisandro Dalcindef get_petsc_dir(): 4065a891e7SLisandro Dalcin import os 4165a891e7SLisandro Dalcin return os.path.dirname(__file__) 4265a891e7SLisandro Dalcin 43a32381aeSLisandro Dalcindef get_config(): 44a32381aeSLisandro Dalcin conf = {} 459fb7a39fSLisandro Dalcin conf['PETSC_DIR'] = get_petsc_dir() 46a32381aeSLisandro Dalcin return conf 4765a891e7SLisandro Dalcin""" 4865a891e7SLisandro Dalcin 4959e0f383SLisandro Dalcinmetadata = { 5059e0f383SLisandro Dalcin 'provides' : ['petsc'], 5159e0f383SLisandro Dalcin 'requires' : [], 5259e0f383SLisandro Dalcin} 5359e0f383SLisandro Dalcin 5465a891e7SLisandro Dalcindef bootstrap(): 55cb58ab5bSLisandro Dalcin # Set PETSC_DIR and PETSC_ARCH 5665a891e7SLisandro Dalcin PETSC_DIR = os.path.abspath(os.getcwd()) 5765a891e7SLisandro Dalcin PETSC_ARCH = get_platform() + '-python' 5865a891e7SLisandro Dalcin os.environ['PETSC_DIR'] = PETSC_DIR 5965a891e7SLisandro Dalcin os.environ['PETSC_ARCH'] = PETSC_ARCH 6065a891e7SLisandro Dalcin sys.path.insert(0, os.path.join(PETSC_DIR, 'config')) 61*05762b81SDavid A Ham sys.path.insert(0, os.path.join(PETSC_DIR, 'conf')) 6259e0f383SLisandro Dalcin # Generate package __init__.py file 639fb7a39fSLisandro Dalcin from distutils.dir_util import mkpath 649fb7a39fSLisandro Dalcin pkgdir = os.path.join('config', 'pypi') 650ddf2052SLisandro Dalcin if not os.path.exists(pkgdir): mkpath(pkgdir) 669fb7a39fSLisandro Dalcin pkgfile = os.path.join(pkgdir, '__init__.py') 67922ada92SLisandro Dalcin fh = open(pkgfile, 'wt') 68922ada92SLisandro Dalcin fh.write(init_py) 69922ada92SLisandro Dalcin fh.close() 7059e0f383SLisandro Dalcin # Simple-minded lookup for MPI and mpi4py 7159e0f383SLisandro Dalcin mpi4py = mpicc = None 7259e0f383SLisandro Dalcin try: 7359e0f383SLisandro Dalcin import mpi4py 7459e0f383SLisandro Dalcin conf = mpi4py.get_config() 7559e0f383SLisandro Dalcin mpicc = conf.get('mpicc') 7659e0f383SLisandro Dalcin except ImportError: # mpi4py is not installed 77922ada92SLisandro Dalcin mpi4py = None 7859e0f383SLisandro Dalcin mpicc = os.environ.get('MPICC') or find_executable('mpicc') 791b095333SLisandro Dalcin except AttributeError: # mpi4py is too old 8059e0f383SLisandro Dalcin pass 81922ada92SLisandro Dalcin if ('setuptools' in sys.modules): 82be96eb59SLisandro Dalcin metadata['zip_safe'] = False 83922ada92SLisandro Dalcin if not mpi4py and mpicc: 84922ada92SLisandro Dalcin metadata['install_requires']= ['mpi4py>=1.2.2'] 8565a891e7SLisandro Dalcin 8665a891e7SLisandro Dalcindef config(dry_run=False): 8765a891e7SLisandro Dalcin log.info('PETSc: configure') 8865a891e7SLisandro Dalcin options = [ 8965a891e7SLisandro Dalcin 'PETSC_ARCH='+os.environ['PETSC_ARCH'], 90cb58ab5bSLisandro Dalcin '--with-shared-libraries=1', 9111035aebSLisandro Dalcin '--with-debugging=0', 92922ada92SLisandro Dalcin '--with-c2html=0', # not needed 93922ada92SLisandro Dalcin #'--with-sowing=0', 94922ada92SLisandro Dalcin #'--with-cmake=0', 9565a891e7SLisandro Dalcin ] 9659e0f383SLisandro Dalcin # MPI 9759e0f383SLisandro Dalcin try: 9859e0f383SLisandro Dalcin import mpi4py 9959e0f383SLisandro Dalcin conf = mpi4py.get_config() 10059e0f383SLisandro Dalcin mpicc = conf.get('mpicc') 101cb58ab5bSLisandro Dalcin mpicxx = conf.get('mpicxx') 102cb58ab5bSLisandro Dalcin mpif90 = conf.get('mpif90') 10359e0f383SLisandro Dalcin except (ImportError, AttributeError): 10459e0f383SLisandro Dalcin mpicc = os.environ.get('MPICC') or find_executable('mpicc') 105cb58ab5bSLisandro Dalcin mpicxx = os.environ.get('MPICXX') or find_executable('mpicxx') 106cb58ab5bSLisandro Dalcin mpif90 = os.environ.get('MPIF90') or find_executable('mpif90') 10759e0f383SLisandro Dalcin if mpicc: 10859e0f383SLisandro Dalcin options.append('--with-cc='+mpicc) 109cb58ab5bSLisandro Dalcin if mpicxx: 110cb58ab5bSLisandro Dalcin options.append('--with-cxx='+mpicxx) 111cb58ab5bSLisandro Dalcin if mpif90: 112cb58ab5bSLisandro Dalcin options.append('--with-fc='+mpif90) 11359e0f383SLisandro Dalcin else: 11459e0f383SLisandro Dalcin options.append('--with-mpi=0') 115cb58ab5bSLisandro Dalcin # Extra configure options 116cb58ab5bSLisandro Dalcin config_opts = os.environ.get('PETSC_CONFIGURE_OPTIONS', '') 117cb58ab5bSLisandro Dalcin config_opts = split_quoted(config_opts) 118cb58ab5bSLisandro Dalcin options.extend(config_opts) 119cb58ab5bSLisandro Dalcin log.info('configure options:') 120cb58ab5bSLisandro Dalcin for opt in options: 121cb58ab5bSLisandro Dalcin log.info(' '*4 + opt) 12259e0f383SLisandro Dalcin # Run PETSc configure 123cb58ab5bSLisandro Dalcin if dry_run: return 124e68ebbecSBarry Smith import configure 12565a891e7SLisandro Dalcin configure.petsc_configure(options) 126e68ebbecSBarry Smith import logger 127e68ebbecSBarry Smith logger.Logger.defaultLog = None 12812c1d45bSMatthew G Knepley 12965a891e7SLisandro Dalcindef build(dry_run=False): 13065a891e7SLisandro Dalcin log.info('PETSc: build') 131367c215cSLisandro Dalcin # Run PETSc build 132cb58ab5bSLisandro Dalcin if dry_run: return 133367c215cSLisandro Dalcin use_builder_py = False 134367c215cSLisandro Dalcin if use_builder_py: 135e68ebbecSBarry Smith import builder 136e68ebbecSBarry Smith builder.PETScMaker().run() 137105e34d4SBarry Smith import logger 138105e34d4SBarry Smith logger.Logger.defaultLog = None 139367c215cSLisandro Dalcin else: 140367c215cSLisandro Dalcin make = find_executable('make') 141367c215cSLisandro Dalcin status = os.system(" ".join( 142367c215cSLisandro Dalcin [make, 'all'] 143367c215cSLisandro Dalcin )) 144367c215cSLisandro Dalcin if status != 0: raise RuntimeError(status) 145e68ebbecSBarry Smith 14665a891e7SLisandro Dalcindef install(dest_dir, prefix=None, dry_run=False): 14765a891e7SLisandro Dalcin log.info('PETSc: install') 14865a891e7SLisandro Dalcin if prefix is None: 14965a891e7SLisandro Dalcin prefix = dest_dir 15065a891e7SLisandro Dalcin options = [ 15165a891e7SLisandro Dalcin '--destDir=' + dest_dir, 1524dee622bSLisandro Dalcin '--prefix=' + prefix, 15365a891e7SLisandro Dalcin ] 154cb58ab5bSLisandro Dalcin log.info('install options:') 155cb58ab5bSLisandro Dalcin for opt in options: 156cb58ab5bSLisandro Dalcin log.info(' '*4 + opt) 15759e0f383SLisandro Dalcin # Run PETSc installer 158cb58ab5bSLisandro Dalcin if dry_run: return 159367c215cSLisandro Dalcin use_install_py = True 160367c215cSLisandro Dalcin if use_install_py: 161105e34d4SBarry Smith import install 16265a891e7SLisandro Dalcin install.Installer(options).run() 16365a891e7SLisandro Dalcin import logger 16465a891e7SLisandro Dalcin logger.Logger.defaultLog = None 165367c215cSLisandro Dalcin else: 166367c215cSLisandro Dalcin make = find_executable('make') 167367c215cSLisandro Dalcin status = os.system(" ".join( 168367c215cSLisandro Dalcin [make, 'install', 'DESTDIR='+dest_dir] 169367c215cSLisandro Dalcin )) 170367c215cSLisandro Dalcin if status != 0: raise RuntimeError(status) 17199468c80SLisandro Dalcin 17299468c80SLisandro Dalcinclass context: 17399468c80SLisandro Dalcin def __init__(self): 17499468c80SLisandro Dalcin self.sys_argv = sys.argv[:] 17599468c80SLisandro Dalcin self.wdir = os.getcwd() 17699468c80SLisandro Dalcin def enter(self): 17799468c80SLisandro Dalcin del sys.argv[1:] 17899468c80SLisandro Dalcin pdir = os.environ['PETSC_DIR'] 17999468c80SLisandro Dalcin os.chdir(pdir) 18099468c80SLisandro Dalcin return self 18199468c80SLisandro Dalcin def exit(self): 18299468c80SLisandro Dalcin sys.argv[:] = self.sys_argv 18399468c80SLisandro Dalcin os.chdir(self.wdir) 184105e34d4SBarry Smith 18565a891e7SLisandro Dalcinclass cmd_build(_build): 18665a891e7SLisandro Dalcin 187a597b971SLisandro Dalcin def initialize_options(self): 188a597b971SLisandro Dalcin _build.initialize_options(self) 189a597b971SLisandro Dalcin PETSC_ARCH = os.environ.get('PETSC_ARCH', '') 190a597b971SLisandro Dalcin self.build_base = os.path.join(PETSC_ARCH, 'build-python') 191a597b971SLisandro Dalcin 19265a891e7SLisandro Dalcin def run(self): 19365a891e7SLisandro Dalcin _build.run(self) 19499468c80SLisandro Dalcin ctx = context().enter() 19565a891e7SLisandro Dalcin try: 19665a891e7SLisandro Dalcin config(self.dry_run) 19765a891e7SLisandro Dalcin build(self.dry_run) 19865a891e7SLisandro Dalcin finally: 19999468c80SLisandro Dalcin ctx.exit() 20065a891e7SLisandro Dalcin 20165a891e7SLisandro Dalcinclass cmd_install(_install): 20265a891e7SLisandro Dalcin 20341716173SLisandro Dalcin def initialize_options(self): 20441716173SLisandro Dalcin _install.initialize_options(self) 20541716173SLisandro Dalcin self.optimize = 1 20641716173SLisandro Dalcin 20765a891e7SLisandro Dalcin def run(self): 20865a891e7SLisandro Dalcin root_dir = self.install_platlib 20965a891e7SLisandro Dalcin dest_dir = os.path.join(root_dir, 'petsc') 21065a891e7SLisandro Dalcin bdist_base = self.get_finalized_command('bdist').bdist_base 21165a891e7SLisandro Dalcin if dest_dir.startswith(bdist_base): 21265a891e7SLisandro Dalcin prefix = dest_dir[len(bdist_base)+1:] 21365a891e7SLisandro Dalcin prefix = prefix[prefix.index(os.path.sep):] 21465a891e7SLisandro Dalcin else: 21565a891e7SLisandro Dalcin prefix = dest_dir 21665a891e7SLisandro Dalcin dest_dir = os.path.abspath(dest_dir) 21765a891e7SLisandro Dalcin prefix = os.path.abspath(prefix) 21899468c80SLisandro Dalcin # 21999468c80SLisandro Dalcin _install.run(self) 22099468c80SLisandro Dalcin ctx = context().enter() 22165a891e7SLisandro Dalcin try: 22265a891e7SLisandro Dalcin install(dest_dir, prefix, self.dry_run) 22365a891e7SLisandro Dalcin finally: 22499468c80SLisandro Dalcin ctx.exit() 22565a891e7SLisandro Dalcin 226a32381aeSLisandro Dalcinclass cmd_sdist(_sdist): 227a32381aeSLisandro Dalcin 228a32381aeSLisandro Dalcin def initialize_options(self): 229a32381aeSLisandro Dalcin _sdist.initialize_options(self) 230a32381aeSLisandro Dalcin self.force_manifest = 1 23199468c80SLisandro Dalcin self.template = os.path.join('config', 'manifest.in') 232a32381aeSLisandro Dalcin 23365a891e7SLisandro Dalcindef version(): 2347d04d9c9SLisandro Dalcin import re 2357d04d9c9SLisandro Dalcin version_re = { 2367d04d9c9SLisandro Dalcin 'major' : re.compile(r"#define\s+PETSC_VERSION_MAJOR\s+(\d+)"), 2377d04d9c9SLisandro Dalcin 'minor' : re.compile(r"#define\s+PETSC_VERSION_MINOR\s+(\d+)"), 2387d04d9c9SLisandro Dalcin 'micro' : re.compile(r"#define\s+PETSC_VERSION_SUBMINOR\s+(\d+)"), 2397d04d9c9SLisandro Dalcin 'patch' : re.compile(r"#define\s+PETSC_VERSION_PATCH\s+(\d+)"), 2407d04d9c9SLisandro Dalcin 'release': re.compile(r"#define\s+PETSC_VERSION_RELEASE\s+(\d+)"), 2417d04d9c9SLisandro Dalcin } 2427d04d9c9SLisandro Dalcin petscversion_h = os.path.join('include','petscversion.h') 2437d04d9c9SLisandro Dalcin data = open(petscversion_h, 'rt').read() 2447d04d9c9SLisandro Dalcin major = int(version_re['major'].search(data).groups()[0]) 2457d04d9c9SLisandro Dalcin minor = int(version_re['minor'].search(data).groups()[0]) 2467d04d9c9SLisandro Dalcin micro = int(version_re['micro'].search(data).groups()[0]) 2477d04d9c9SLisandro Dalcin patch = int(version_re['patch'].search(data).groups()[0]) 2487d04d9c9SLisandro Dalcin release = int(version_re['release'].search(data).groups()[0]) 2497d04d9c9SLisandro Dalcin if release: 2507d04d9c9SLisandro Dalcin v = "%d.%d" % (major, minor) 2517d04d9c9SLisandro Dalcin if micro > 0: 2527d04d9c9SLisandro Dalcin v += ".%d" % micro 253247a1238SLisandro Dalcin #if patch > 0: 254247a1238SLisandro Dalcin # v += ".post%d" % patch 2557d04d9c9SLisandro Dalcin else: 25661a717f9SLisandro Dalcin v = "%d.%d.dev%d" % (major, minor+1, 0) 2577d04d9c9SLisandro Dalcin return v 25859e0f383SLisandro Dalcin 25965a891e7SLisandro Dalcindef tarball(): 26050f36069SLisandro Dalcin VERSION = version() 26150f36069SLisandro Dalcin if '.dev' in VERSION: 262a32381aeSLisandro Dalcin return None 2637d562c6eSLisandro Dalcin bits = VERSION.split('.') 2647d562c6eSLisandro Dalcin if len(bits) == 2: bits.append('0') 265247a1238SLisandro Dalcin PETSC_VERSION = '.'.join(bits[:3]) 26650f36069SLisandro Dalcin return ('http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/' 267a9157d91SLisandro Dalcin 'petsc-lite-%s.tar.gz#egg=petsc-%s' % (PETSC_VERSION, VERSION)) 26865a891e7SLisandro Dalcin 26965a891e7SLisandro Dalcindescription = __doc__.split('\n')[1:-1]; del description[1:3] 27065a891e7SLisandro Dalcinclassifiers = """ 27165a891e7SLisandro DalcinLicense :: Public Domain 27265a891e7SLisandro DalcinOperating System :: POSIX 27365a891e7SLisandro DalcinIntended Audience :: Developers 27465a891e7SLisandro DalcinIntended Audience :: Science/Research 27565a891e7SLisandro DalcinProgramming Language :: C 27665a891e7SLisandro DalcinProgramming Language :: C++ 27765a891e7SLisandro DalcinProgramming Language :: Fortran 27865a891e7SLisandro DalcinProgramming Language :: Python 27965a891e7SLisandro DalcinTopic :: Scientific/Engineering 28065a891e7SLisandro DalcinTopic :: Software Development :: Libraries 28165a891e7SLisandro Dalcin""" 28265a891e7SLisandro Dalcin 28365a891e7SLisandro Dalcinbootstrap() 28465a891e7SLisandro Dalcinsetup(name='petsc', 28565a891e7SLisandro Dalcin version=version(), 28665a891e7SLisandro Dalcin description=description.pop(0), 28765a891e7SLisandro Dalcin long_description='\n'.join(description), 28865a891e7SLisandro Dalcin classifiers= classifiers.split('\n')[1:-1], 28965a891e7SLisandro Dalcin keywords = ['PETSc', 'MPI'], 29065a891e7SLisandro Dalcin platforms=['POSIX'], 29165a891e7SLisandro Dalcin license='PETSc', 29265a891e7SLisandro Dalcin 29365a891e7SLisandro Dalcin url='http://www.mcs.anl.gov/petsc/', 29465a891e7SLisandro Dalcin download_url=tarball(), 29565a891e7SLisandro Dalcin 29665a891e7SLisandro Dalcin author='PETSc Team', 29799468c80SLisandro Dalcin author_email='petsc-maint@mcs.anl.gov', 29865a891e7SLisandro Dalcin maintainer='Lisandro Dalcin', 29965a891e7SLisandro Dalcin maintainer_email='dalcinl@gmail.com', 30065a891e7SLisandro Dalcin 30165a891e7SLisandro Dalcin packages = ['petsc'], 3029fb7a39fSLisandro Dalcin package_dir = {'petsc': 'config/pypi'}, 30365a891e7SLisandro Dalcin cmdclass={ 30465a891e7SLisandro Dalcin 'build': cmd_build, 30565a891e7SLisandro Dalcin 'install': cmd_install, 306a32381aeSLisandro Dalcin 'sdist': cmd_sdist, 30765a891e7SLisandro Dalcin }, 30859e0f383SLisandro Dalcin **metadata) 309