1e68ebbecSBarry Smith#!/usr/bin/env python 2e68ebbecSBarry Smith 3e68ebbecSBarry Smith""" 465a891e7SLisandro DalcinPETSc: Portable, Extensible Toolkit for Scientific Computation 565a891e7SLisandro Dalcin============================================================== 665a891e7SLisandro Dalcin 765a891e7SLisandro DalcinThe Portable, Extensible Toolkit for Scientific Computation (PETSc), 865a891e7SLisandro Dalcinis a suite of data structures and routines for the scalable (parallel) 965a891e7SLisandro Dalcinsolution of scientific applications modeled by partial differential 1065a891e7SLisandro Dalcinequations. It employs the Message Passing Interface (MPI) standard for 1165a891e7SLisandro Dalcinall message-passing communication. 12922ada92SLisandro Dalcin 13922ada92SLisandro Dalcin.. tip:: 14922ada92SLisandro Dalcin 15922ada92SLisandro Dalcin You can also install `petsc-dev`_ with:: 16922ada92SLisandro Dalcin 17922ada92SLisandro Dalcin $ pip install petsc==dev 18922ada92SLisandro Dalcin 19922ada92SLisandro Dalcin .. _petsc-dev: http://petsc.cs.iit.edu/petsc/ 20922ada92SLisandro Dalcin petsc-dev/archive/tip.tar.gz#egg=petsc-dev 21e68ebbecSBarry Smith""" 22e68ebbecSBarry Smith 2365a891e7SLisandro Dalcinimport sys, os 2465a891e7SLisandro Dalcinfrom distutils.core import setup 25cb58ab5bSLisandro Dalcinfrom distutils.util import get_platform, split_quoted 26b88f8b63SLisandro Dalcinfrom distutils.spawn import find_executable 2765a891e7SLisandro Dalcinfrom distutils.command.build import build as _build 2865a891e7SLisandro Dalcinif 'setuptools' in sys.modules: 2965a891e7SLisandro Dalcin from setuptools.command.install import install as _install 3065a891e7SLisandro Dalcinelse: 3165a891e7SLisandro Dalcin from distutils.command.install import install as _install 32a32381aeSLisandro Dalcinfrom distutils.command.sdist import sdist as _sdist 3365a891e7SLisandro Dalcinfrom distutils import log 3412c1d45bSMatthew G Knepley 3565a891e7SLisandro Dalcininit_py = """\ 36a32381aeSLisandro Dalcin# Author: PETSc Team 37a597b971SLisandro Dalcin# Contact: petsc-maint@mcs.anl.gov 3865a891e7SLisandro Dalcin 3965a891e7SLisandro Dalcindef get_petsc_dir(): 4065a891e7SLisandro Dalcin import os 4165a891e7SLisandro Dalcin return os.path.dirname(__file__) 4265a891e7SLisandro Dalcin 43a32381aeSLisandro Dalcindef get_config(): 44a32381aeSLisandro Dalcin conf = {} 459fb7a39fSLisandro Dalcin conf['PETSC_DIR'] = get_petsc_dir() 46a32381aeSLisandro Dalcin return conf 4765a891e7SLisandro Dalcin""" 4865a891e7SLisandro Dalcin 4959e0f383SLisandro Dalcinmetadata = { 5059e0f383SLisandro Dalcin 'provides' : ['petsc'], 5159e0f383SLisandro Dalcin 'requires' : [], 5259e0f383SLisandro Dalcin} 5359e0f383SLisandro Dalcin 5465a891e7SLisandro Dalcindef bootstrap(): 55cb58ab5bSLisandro Dalcin # Set PETSC_DIR and PETSC_ARCH 5665a891e7SLisandro Dalcin PETSC_DIR = os.path.abspath(os.getcwd()) 5765a891e7SLisandro Dalcin PETSC_ARCH = get_platform() + '-python' 5865a891e7SLisandro Dalcin os.environ['PETSC_DIR'] = PETSC_DIR 5965a891e7SLisandro Dalcin os.environ['PETSC_ARCH'] = PETSC_ARCH 6065a891e7SLisandro Dalcin sys.path.insert(0, os.path.join(PETSC_DIR, 'config')) 6159e0f383SLisandro Dalcin # Generate package __init__.py file 629fb7a39fSLisandro Dalcin from distutils.dir_util import mkpath 639fb7a39fSLisandro Dalcin pkgdir = os.path.join('config', 'pypi') 640ddf2052SLisandro Dalcin if not os.path.exists(pkgdir): mkpath(pkgdir) 659fb7a39fSLisandro Dalcin pkgfile = os.path.join(pkgdir, '__init__.py') 66922ada92SLisandro Dalcin fh = open(pkgfile, 'wt') 67922ada92SLisandro Dalcin fh.write(init_py) 68922ada92SLisandro Dalcin fh.close() 6959e0f383SLisandro Dalcin # Simple-minded lookup for MPI and mpi4py 7059e0f383SLisandro Dalcin mpi4py = mpicc = None 7159e0f383SLisandro Dalcin try: 7259e0f383SLisandro Dalcin import mpi4py 7359e0f383SLisandro Dalcin conf = mpi4py.get_config() 7459e0f383SLisandro Dalcin mpicc = conf.get('mpicc') 7559e0f383SLisandro Dalcin except ImportError: # mpi4py is not installed 76922ada92SLisandro Dalcin mpi4py = None 7759e0f383SLisandro Dalcin mpicc = os.environ.get('MPICC') or find_executable('mpicc') 781b095333SLisandro Dalcin except AttributeError: # mpi4py is too old 7959e0f383SLisandro Dalcin pass 80922ada92SLisandro Dalcin if ('setuptools' in sys.modules): 81be96eb59SLisandro Dalcin metadata['zip_safe'] = False 82922ada92SLisandro Dalcin if not mpi4py and mpicc: 83922ada92SLisandro Dalcin metadata['install_requires']= ['mpi4py>=1.2.2'] 8465a891e7SLisandro Dalcin 8565a891e7SLisandro Dalcindef config(dry_run=False): 8665a891e7SLisandro Dalcin log.info('PETSc: configure') 8765a891e7SLisandro Dalcin options = [ 8865a891e7SLisandro Dalcin 'PETSC_ARCH='+os.environ['PETSC_ARCH'], 89cb58ab5bSLisandro Dalcin '--with-shared-libraries=1', 9011035aebSLisandro Dalcin '--with-debugging=0', 91922ada92SLisandro Dalcin '--with-c2html=0', # not needed 92922ada92SLisandro Dalcin #'--with-sowing=0', 93922ada92SLisandro Dalcin #'--with-cmake=0', 9465a891e7SLisandro Dalcin ] 9559e0f383SLisandro Dalcin # MPI 9659e0f383SLisandro Dalcin try: 9759e0f383SLisandro Dalcin import mpi4py 9859e0f383SLisandro Dalcin conf = mpi4py.get_config() 9959e0f383SLisandro Dalcin mpicc = conf.get('mpicc') 100cb58ab5bSLisandro Dalcin mpicxx = conf.get('mpicxx') 101cb58ab5bSLisandro Dalcin mpif90 = conf.get('mpif90') 10259e0f383SLisandro Dalcin except (ImportError, AttributeError): 10359e0f383SLisandro Dalcin mpicc = os.environ.get('MPICC') or find_executable('mpicc') 104cb58ab5bSLisandro Dalcin mpicxx = os.environ.get('MPICXX') or find_executable('mpicxx') 105cb58ab5bSLisandro Dalcin mpif90 = os.environ.get('MPIF90') or find_executable('mpif90') 10659e0f383SLisandro Dalcin if mpicc: 10759e0f383SLisandro Dalcin options.append('--with-cc='+mpicc) 108cb58ab5bSLisandro Dalcin if mpicxx: 109cb58ab5bSLisandro Dalcin options.append('--with-cxx='+mpicxx) 110cb58ab5bSLisandro Dalcin if mpif90: 111cb58ab5bSLisandro Dalcin options.append('--with-fc='+mpif90) 11259e0f383SLisandro Dalcin else: 11359e0f383SLisandro Dalcin options.append('--with-mpi=0') 114cb58ab5bSLisandro Dalcin # Extra configure options 115cb58ab5bSLisandro Dalcin config_opts = os.environ.get('PETSC_CONFIGURE_OPTIONS', '') 116cb58ab5bSLisandro Dalcin config_opts = split_quoted(config_opts) 117cb58ab5bSLisandro Dalcin options.extend(config_opts) 118cb58ab5bSLisandro Dalcin log.info('configure options:') 119cb58ab5bSLisandro Dalcin for opt in options: 120cb58ab5bSLisandro Dalcin log.info(' '*4 + opt) 12159e0f383SLisandro Dalcin # Run PETSc configure 122cb58ab5bSLisandro Dalcin if dry_run: return 123e68ebbecSBarry Smith import configure 12465a891e7SLisandro Dalcin configure.petsc_configure(options) 125e68ebbecSBarry Smith import logger 126e68ebbecSBarry Smith logger.Logger.defaultLog = None 12712c1d45bSMatthew G Knepley 12865a891e7SLisandro Dalcindef build(dry_run=False): 12965a891e7SLisandro Dalcin log.info('PETSc: build') 130*367c215cSLisandro Dalcin # Run PETSc build 131cb58ab5bSLisandro Dalcin if dry_run: return 132*367c215cSLisandro Dalcin use_builder_py = False 133*367c215cSLisandro Dalcin if use_builder_py: 134e68ebbecSBarry Smith import builder 135e68ebbecSBarry Smith builder.PETScMaker().run() 136105e34d4SBarry Smith import logger 137105e34d4SBarry Smith logger.Logger.defaultLog = None 138*367c215cSLisandro Dalcin else: 139*367c215cSLisandro Dalcin make = find_executable('make') 140*367c215cSLisandro Dalcin status = os.system(" ".join( 141*367c215cSLisandro Dalcin [make, 'all'] 142*367c215cSLisandro Dalcin )) 143*367c215cSLisandro Dalcin if status != 0: raise RuntimeError(status) 144e68ebbecSBarry Smith 14565a891e7SLisandro Dalcindef install(dest_dir, prefix=None, dry_run=False): 14665a891e7SLisandro Dalcin log.info('PETSc: install') 14765a891e7SLisandro Dalcin if prefix is None: 14865a891e7SLisandro Dalcin prefix = dest_dir 14965a891e7SLisandro Dalcin options = [ 15065a891e7SLisandro Dalcin '--destDir=' + dest_dir, 1514dee622bSLisandro Dalcin '--prefix=' + prefix, 15265a891e7SLisandro Dalcin ] 153cb58ab5bSLisandro Dalcin log.info('install options:') 154cb58ab5bSLisandro Dalcin for opt in options: 155cb58ab5bSLisandro Dalcin log.info(' '*4 + opt) 15659e0f383SLisandro Dalcin # Run PETSc installer 157cb58ab5bSLisandro Dalcin if dry_run: return 158*367c215cSLisandro Dalcin use_install_py = True 159*367c215cSLisandro Dalcin if use_install_py: 160105e34d4SBarry Smith import install 16165a891e7SLisandro Dalcin install.Installer(options).run() 16265a891e7SLisandro Dalcin import logger 16365a891e7SLisandro Dalcin logger.Logger.defaultLog = None 164*367c215cSLisandro Dalcin else: 165*367c215cSLisandro Dalcin make = find_executable('make') 166*367c215cSLisandro Dalcin status = os.system(" ".join( 167*367c215cSLisandro Dalcin [make, 'install', 'DESTDIR='+dest_dir] 168*367c215cSLisandro Dalcin )) 169*367c215cSLisandro Dalcin if status != 0: raise RuntimeError(status) 17099468c80SLisandro Dalcin 17199468c80SLisandro Dalcinclass context: 17299468c80SLisandro Dalcin def __init__(self): 17399468c80SLisandro Dalcin self.sys_argv = sys.argv[:] 17499468c80SLisandro Dalcin self.wdir = os.getcwd() 17599468c80SLisandro Dalcin def enter(self): 17699468c80SLisandro Dalcin del sys.argv[1:] 17799468c80SLisandro Dalcin pdir = os.environ['PETSC_DIR'] 17899468c80SLisandro Dalcin os.chdir(pdir) 17999468c80SLisandro Dalcin return self 18099468c80SLisandro Dalcin def exit(self): 18199468c80SLisandro Dalcin sys.argv[:] = self.sys_argv 18299468c80SLisandro Dalcin os.chdir(self.wdir) 183105e34d4SBarry Smith 18465a891e7SLisandro Dalcinclass cmd_build(_build): 18565a891e7SLisandro Dalcin 186a597b971SLisandro Dalcin def initialize_options(self): 187a597b971SLisandro Dalcin _build.initialize_options(self) 188a597b971SLisandro Dalcin PETSC_ARCH = os.environ.get('PETSC_ARCH', '') 189a597b971SLisandro Dalcin self.build_base = os.path.join(PETSC_ARCH, 'build-python') 190a597b971SLisandro Dalcin 19165a891e7SLisandro Dalcin def run(self): 19265a891e7SLisandro Dalcin _build.run(self) 19399468c80SLisandro Dalcin ctx = context().enter() 19465a891e7SLisandro Dalcin try: 19565a891e7SLisandro Dalcin config(self.dry_run) 19665a891e7SLisandro Dalcin build(self.dry_run) 19765a891e7SLisandro Dalcin finally: 19899468c80SLisandro Dalcin ctx.exit() 19965a891e7SLisandro Dalcin 20065a891e7SLisandro Dalcinclass cmd_install(_install): 20165a891e7SLisandro Dalcin 20241716173SLisandro Dalcin def initialize_options(self): 20341716173SLisandro Dalcin _install.initialize_options(self) 20441716173SLisandro Dalcin self.optimize = 1 20541716173SLisandro Dalcin 20665a891e7SLisandro Dalcin def run(self): 20765a891e7SLisandro Dalcin root_dir = self.install_platlib 20865a891e7SLisandro Dalcin dest_dir = os.path.join(root_dir, 'petsc') 20965a891e7SLisandro Dalcin bdist_base = self.get_finalized_command('bdist').bdist_base 21065a891e7SLisandro Dalcin if dest_dir.startswith(bdist_base): 21165a891e7SLisandro Dalcin prefix = dest_dir[len(bdist_base)+1:] 21265a891e7SLisandro Dalcin prefix = prefix[prefix.index(os.path.sep):] 21365a891e7SLisandro Dalcin else: 21465a891e7SLisandro Dalcin prefix = dest_dir 21565a891e7SLisandro Dalcin dest_dir = os.path.abspath(dest_dir) 21665a891e7SLisandro Dalcin prefix = os.path.abspath(prefix) 21799468c80SLisandro Dalcin # 21899468c80SLisandro Dalcin _install.run(self) 21999468c80SLisandro Dalcin ctx = context().enter() 22065a891e7SLisandro Dalcin try: 22165a891e7SLisandro Dalcin install(dest_dir, prefix, self.dry_run) 22265a891e7SLisandro Dalcin finally: 22399468c80SLisandro Dalcin ctx.exit() 22465a891e7SLisandro Dalcin 225a32381aeSLisandro Dalcinclass cmd_sdist(_sdist): 226a32381aeSLisandro Dalcin 227a32381aeSLisandro Dalcin def initialize_options(self): 228a32381aeSLisandro Dalcin _sdist.initialize_options(self) 229a32381aeSLisandro Dalcin self.force_manifest = 1 23099468c80SLisandro Dalcin self.template = os.path.join('config', 'manifest.in') 231a32381aeSLisandro Dalcin 23265a891e7SLisandro Dalcindef version(): 2337d04d9c9SLisandro Dalcin import re 2347d04d9c9SLisandro Dalcin version_re = { 2357d04d9c9SLisandro Dalcin 'major' : re.compile(r"#define\s+PETSC_VERSION_MAJOR\s+(\d+)"), 2367d04d9c9SLisandro Dalcin 'minor' : re.compile(r"#define\s+PETSC_VERSION_MINOR\s+(\d+)"), 2377d04d9c9SLisandro Dalcin 'micro' : re.compile(r"#define\s+PETSC_VERSION_SUBMINOR\s+(\d+)"), 2387d04d9c9SLisandro Dalcin 'patch' : re.compile(r"#define\s+PETSC_VERSION_PATCH\s+(\d+)"), 2397d04d9c9SLisandro Dalcin 'release': re.compile(r"#define\s+PETSC_VERSION_RELEASE\s+(\d+)"), 2407d04d9c9SLisandro Dalcin } 2417d04d9c9SLisandro Dalcin petscversion_h = os.path.join('include','petscversion.h') 2427d04d9c9SLisandro Dalcin data = open(petscversion_h, 'rt').read() 2437d04d9c9SLisandro Dalcin major = int(version_re['major'].search(data).groups()[0]) 2447d04d9c9SLisandro Dalcin minor = int(version_re['minor'].search(data).groups()[0]) 2457d04d9c9SLisandro Dalcin micro = int(version_re['micro'].search(data).groups()[0]) 2467d04d9c9SLisandro Dalcin patch = int(version_re['patch'].search(data).groups()[0]) 2477d04d9c9SLisandro Dalcin release = int(version_re['release'].search(data).groups()[0]) 2487d04d9c9SLisandro Dalcin if release: 2497d04d9c9SLisandro Dalcin v = "%d.%d" % (major, minor) 2507d04d9c9SLisandro Dalcin if micro > 0: 2517d04d9c9SLisandro Dalcin v += ".%d" % micro 2527d04d9c9SLisandro Dalcin if patch > 0: 253bd6472b3SLisandro Dalcin v += ".%d" % patch 2547d04d9c9SLisandro Dalcin else: 25561a717f9SLisandro Dalcin v = "%d.%d.dev%d" % (major, minor+1, 0) 2567d04d9c9SLisandro Dalcin return v 25759e0f383SLisandro Dalcin 25865a891e7SLisandro Dalcindef tarball(): 25950f36069SLisandro Dalcin VERSION = version() 26050f36069SLisandro Dalcin if '.dev' in VERSION: 261a32381aeSLisandro Dalcin return None 2627d562c6eSLisandro Dalcin bits = VERSION.split('.') 2637d562c6eSLisandro Dalcin if len(bits) == 2: bits.append('0') 264a9157d91SLisandro Dalcin PETSC_VERSION = '.'.join(bits[:-1]) + '-p' + bits[-1] 26550f36069SLisandro Dalcin return ('http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/' 266a9157d91SLisandro Dalcin 'petsc-lite-%s.tar.gz#egg=petsc-%s' % (PETSC_VERSION, VERSION)) 26765a891e7SLisandro Dalcin 26865a891e7SLisandro Dalcindescription = __doc__.split('\n')[1:-1]; del description[1:3] 26965a891e7SLisandro Dalcinclassifiers = """ 27065a891e7SLisandro DalcinLicense :: Public Domain 27165a891e7SLisandro DalcinOperating System :: POSIX 27265a891e7SLisandro DalcinIntended Audience :: Developers 27365a891e7SLisandro DalcinIntended Audience :: Science/Research 27465a891e7SLisandro DalcinProgramming Language :: C 27565a891e7SLisandro DalcinProgramming Language :: C++ 27665a891e7SLisandro DalcinProgramming Language :: Fortran 27765a891e7SLisandro DalcinProgramming Language :: Python 27865a891e7SLisandro DalcinTopic :: Scientific/Engineering 27965a891e7SLisandro DalcinTopic :: Software Development :: Libraries 28065a891e7SLisandro Dalcin""" 28165a891e7SLisandro Dalcin 28265a891e7SLisandro Dalcinbootstrap() 28365a891e7SLisandro Dalcinsetup(name='petsc', 28465a891e7SLisandro Dalcin version=version(), 28565a891e7SLisandro Dalcin description=description.pop(0), 28665a891e7SLisandro Dalcin long_description='\n'.join(description), 28765a891e7SLisandro Dalcin classifiers= classifiers.split('\n')[1:-1], 28865a891e7SLisandro Dalcin keywords = ['PETSc', 'MPI'], 28965a891e7SLisandro Dalcin platforms=['POSIX'], 29065a891e7SLisandro Dalcin license='PETSc', 29165a891e7SLisandro Dalcin 29265a891e7SLisandro Dalcin url='http://www.mcs.anl.gov/petsc/', 29365a891e7SLisandro Dalcin download_url=tarball(), 29465a891e7SLisandro Dalcin 29565a891e7SLisandro Dalcin author='PETSc Team', 29699468c80SLisandro Dalcin author_email='petsc-maint@mcs.anl.gov', 29765a891e7SLisandro Dalcin maintainer='Lisandro Dalcin', 29865a891e7SLisandro Dalcin maintainer_email='dalcinl@gmail.com', 29965a891e7SLisandro Dalcin 30065a891e7SLisandro Dalcin packages = ['petsc'], 3019fb7a39fSLisandro Dalcin package_dir = {'petsc': 'config/pypi'}, 30265a891e7SLisandro Dalcin cmdclass={ 30365a891e7SLisandro Dalcin 'build': cmd_build, 30465a891e7SLisandro Dalcin 'install': cmd_install, 305a32381aeSLisandro Dalcin 'sdist': cmd_sdist, 30665a891e7SLisandro Dalcin }, 30759e0f383SLisandro Dalcin **metadata) 308