xref: /petsc/src/binding/petsc4py/test/test_mat_aij.py (revision fc98926714bef94ccba523985fb4ce0ed98d5be1)
15808f684SSatish Balayfrom petsc4py import PETSc
25808f684SSatish Balayimport unittest
35808f684SSatish Balay
45808f684SSatish Balayimport numpy as N
55808f684SSatish Balayimport numpy as np
65808f684SSatish Balay
75808f684SSatish Balaydef mkgraph(comm, m, n):
85808f684SSatish Balay    start = m*n * comm.rank
95808f684SSatish Balay    end   = start + m*n
105808f684SSatish Balay    idt = PETSc.IntType
115808f684SSatish Balay    rows = []
125808f684SSatish Balay    for I in range(start, end) :
135808f684SSatish Balay        rows.append([])
145808f684SSatish Balay        adj = rows[-1]
155808f684SSatish Balay        i = I//n; j = I - i*n
165808f684SSatish Balay        if i> 0  : J = I-n; adj.append(J)
175808f684SSatish Balay        if j> 0  : J = I-1; adj.append(J)
185808f684SSatish Balay        adj.append(I)
195808f684SSatish Balay        if j< n-1: J = I+1; adj.append(J)
205808f684SSatish Balay        if i< m-1: J = I+n; adj.append(J)
215808f684SSatish Balay    nods = N.array(range(start, end), dtype=idt)
225808f684SSatish Balay    xadj = N.array([0]*(len(rows)+1), dtype=idt)
235808f684SSatish Balay    xadj[0] = 0
245808f684SSatish Balay    xadj[1:] = N.cumsum([len(r) for r in rows], dtype=idt)
255808f684SSatish Balay    if not rows: adjy = N.array([],dtype=idt)
265808f684SSatish Balay    else:        adjy = N.concatenate(rows).astype(idt)
275808f684SSatish Balay    return nods, xadj, adjy
285808f684SSatish Balay
295808f684SSatish Balay
305808f684SSatish Balayclass BaseTestMatAnyAIJ(object):
315808f684SSatish Balay
325808f684SSatish Balay    COMM  = PETSc.COMM_NULL
335808f684SSatish Balay    TYPE  = None
345808f684SSatish Balay    GRID  = 0, 0
355808f684SSatish Balay    BSIZE = None
365808f684SSatish Balay
375808f684SSatish Balay    def setUp(self):
385808f684SSatish Balay        COMM   = self.COMM
395808f684SSatish Balay        GM, GN = self.GRID
405808f684SSatish Balay        BS     = self.BSIZE
415808f684SSatish Balay        #
425808f684SSatish Balay        try:
435808f684SSatish Balay            rbs, cbs = BS
445808f684SSatish Balay            rbs = rbs or 1
455808f684SSatish Balay            cbs = cbs or 1
465808f684SSatish Balay        except (TypeError, ValueError):
475808f684SSatish Balay            rbs = cbs = BS or 1
485808f684SSatish Balay        sdt = dtype = PETSc.ScalarType
495808f684SSatish Balay        self.rows, self.xadj, self.adjy = mkgraph(COMM, GM, GN)
505808f684SSatish Balay        self.vals = N.array(range(1, 1 + len(self.adjy)*rbs*cbs), dtype=sdt)
515808f684SSatish Balay        self.vals.shape = (-1, rbs, cbs)
525808f684SSatish Balay        #
535808f684SSatish Balay        m, n = GM, GN
545808f684SSatish Balay        rowsz = (m*n*rbs, None)
555808f684SSatish Balay        colsz = (m*n*cbs, None)
565808f684SSatish Balay        A = self.A = PETSc.Mat().create(comm=COMM)
575808f684SSatish Balay        A.setType(self.TYPE)
585808f684SSatish Balay        A.setSizes([rowsz, colsz], BS)
595808f684SSatish Balay
605808f684SSatish Balay    def tearDown(self):
615808f684SSatish Balay        self.A.destroy()
625808f684SSatish Balay        self.A = None
635808f684SSatish Balay
645808f684SSatish Balay    def testSetPreallocNNZ(self):
655808f684SSatish Balay        nnz = [5, 2]
665808f684SSatish Balay        self.A.setPreallocationNNZ(nnz)
675808f684SSatish Balay        self._chk_bs(self.A, self.BSIZE)
685808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
695808f684SSatish Balay        self.A.setOption(opt, True)
705808f684SSatish Balay        ai, aj, av = self._set_values()
715808f684SSatish Balay        self.A.assemble()
725808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
735808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
745808f684SSatish Balay        self.A.setOption(opt, True)
755808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
765808f684SSatish Balay        self.A.assemble()
775808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
785808f684SSatish Balay
795808f684SSatish Balay    def testSetPreallocNNZ_2(self):
805808f684SSatish Balay        _, ai, _, _ =self._get_aijv()
815808f684SSatish Balay        d_nnz = N.diff(ai)
825808f684SSatish Balay        nnz = [d_nnz, 3]
835808f684SSatish Balay        self.A.setPreallocationNNZ(nnz)
845808f684SSatish Balay        self._chk_bs(self.A, self.BSIZE)
855808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
865808f684SSatish Balay        self.A.setOption(opt, True)
875808f684SSatish Balay        ai, aj, av = self._set_values()
885808f684SSatish Balay        self.A.assemble()
895808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
905808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
915808f684SSatish Balay        self.A.setOption(opt, True)
925808f684SSatish Balay        ai, aj, av =self._set_values_ijv()
935808f684SSatish Balay        self.A.assemble()
945808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
955808f684SSatish Balay
965808f684SSatish Balay    def testSetPreallocCSR(self):
97*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
985808f684SSatish Balay        _, ai, aj, _ = self._get_aijv()
995808f684SSatish Balay        csr = [ai, aj]
1005808f684SSatish Balay        self.A.setPreallocationCSR(csr)
1015808f684SSatish Balay        self._chk_bs(self.A, self.BSIZE)
1025808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1035808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
1045808f684SSatish Balay        self.A.setOption(opt, True)
1055808f684SSatish Balay        self._set_values()
1065808f684SSatish Balay        self.A.assemble()
1075808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1085808f684SSatish Balay        self._set_values_ijv()
1095808f684SSatish Balay        self.A.assemble()
1105808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1115808f684SSatish Balay
1125808f684SSatish Balay    def testSetPreallocCSR_2(self):
113*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
1145808f684SSatish Balay        _, ai, aj, av =self._get_aijv()
1155808f684SSatish Balay        csr = [ai, aj, av]
1165808f684SSatish Balay        self.A.setPreallocationCSR(csr)
1175808f684SSatish Balay        self._chk_bs(self.A, self.BSIZE)
1185808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1195808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
1205808f684SSatish Balay        self.A.setOption(opt, True)
1215808f684SSatish Balay        self._set_values()
1225808f684SSatish Balay        self.A.assemble()
1235808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1245808f684SSatish Balay        self._set_values_ijv()
1255808f684SSatish Balay        self.A.assemble()
1265808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1275808f684SSatish Balay
1285808f684SSatish Balay    def testSetValues(self):
1295808f684SSatish Balay        self._preallocate()
1305808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
1315808f684SSatish Balay        self.A.setOption(opt, True)
1325808f684SSatish Balay        ai, aj, av = self._set_values()
1335808f684SSatish Balay        self.A.assemble()
1345808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1355808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
1365808f684SSatish Balay        self.A.setOption(opt, True)
1375808f684SSatish Balay        ai, aj, av = self._set_values()
1385808f684SSatish Balay        self.A.assemble()
1395808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1405808f684SSatish Balay
1415808f684SSatish Balay    def testSetValuesIJV(self):
1425808f684SSatish Balay        self._preallocate()
1435808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
1445808f684SSatish Balay        self.A.setOption(opt, True)
1455808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
1465808f684SSatish Balay        self.A.assemble()
1475808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1485808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
1495808f684SSatish Balay        self.A.setOption(opt, True)
1505808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
1515808f684SSatish Balay        self.A.assemble()
1525808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
1535808f684SSatish Balay
1545808f684SSatish Balay    def testGetValuesCSR(self):
155*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
1565808f684SSatish Balay        self._preallocate()
1575808f684SSatish Balay        self._set_values_ijv()
1585808f684SSatish Balay        A = self.A
1595808f684SSatish Balay        A.assemble()
1605808f684SSatish Balay        if 'sbaij' in A.getType():
1615808f684SSatish Balay            opt = PETSc.Mat.Option.GETROW_UPPERTRIANGULAR
1625808f684SSatish Balay            self.A.setOption(opt, True)
1635808f684SSatish Balay        ai, aj, av = A.getValuesCSR()
1645808f684SSatish Balay        rstart, rend = A.getOwnershipRange()
1655808f684SSatish Balay        for row in range(rstart, rend):
1665808f684SSatish Balay            cols, vals = A.getRow(row)
1675808f684SSatish Balay            i = row - rstart
1685808f684SSatish Balay            self.assertTrue(N.allclose(aj[ai[i]:ai[i+1]], cols))
1695808f684SSatish Balay            self.assertTrue(N.allclose(av[ai[i]:ai[i+1]], vals))
1705808f684SSatish Balay
1715808f684SSatish Balay    def testConvertToSAME(self):
1725808f684SSatish Balay        self._preallocate()
1735808f684SSatish Balay        self._set_values_ijv()
1745808f684SSatish Balay        A = self.A
1755808f684SSatish Balay        A.assemble()
1765808f684SSatish Balay        A.convert('same')
1775808f684SSatish Balay
1785808f684SSatish Balay    def testConvertToDENSE(self):
1795808f684SSatish Balay        self._preallocate()
1805808f684SSatish Balay        self._set_values_ijv()
1815808f684SSatish Balay        A = self.A
1825808f684SSatish Balay        A.assemble()
1835808f684SSatish Balay        x, y = A.getVecs()
1845808f684SSatish Balay        x.setRandom()
1855808f684SSatish Balay        z = y.duplicate()
1865808f684SSatish Balay        A.mult(x, y)
1875808f684SSatish Balay        if A.type.endswith('sbaij'): return
1885808f684SSatish Balay        B = PETSc.Mat()
1895808f684SSatish Balay        A.convert('dense', B)  # initial
1905808f684SSatish Balay        B.mult(x, z)
1915808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
1925808f684SSatish Balay        A.convert('dense', B)  # reuse
1935808f684SSatish Balay        B.mult(x, z)
1945808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
1955808f684SSatish Balay        A.convert('dense')     # inplace
1965808f684SSatish Balay        A.mult(x, z)
1975808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
1985808f684SSatish Balay
1995808f684SSatish Balay    def testConvertToAIJ(self):
2005808f684SSatish Balay        self._preallocate()
2015808f684SSatish Balay        self._set_values_ijv()
2025808f684SSatish Balay        A = self.A
2035808f684SSatish Balay        A.assemble()
2045808f684SSatish Balay        x, y = A.getVecs()
2055808f684SSatish Balay        x.setRandom()
2065808f684SSatish Balay        z = y.duplicate()
2075808f684SSatish Balay        A.mult(x, y)
2085808f684SSatish Balay        if A.type.endswith('sbaij'): return
2095808f684SSatish Balay        B = PETSc.Mat()
2105808f684SSatish Balay        A.convert('aij', B)  # initial
2115808f684SSatish Balay        B.mult(x, z)
2125808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
2135808f684SSatish Balay        A.convert('aij', B)  # reuse
2145808f684SSatish Balay        B.mult(x, z)
2155808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
2165808f684SSatish Balay        A.convert('aij')     # inplace
2175808f684SSatish Balay        A.mult(x, z)
2185808f684SSatish Balay        self.assertTrue(np.allclose(y.array, z.array))
2195808f684SSatish Balay
2205808f684SSatish Balay    def testGetDiagonalBlock(self):
221*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
2225808f684SSatish Balay        self._preallocate()
2235808f684SSatish Balay        self._set_values_ijv()
2245808f684SSatish Balay        self.A.assemble()
2255808f684SSatish Balay        B = self.A.getDiagonalBlock()
2265808f684SSatish Balay        self.assertEqual(self.A.getLocalSize(), B.getSize())
2275808f684SSatish Balay        B.destroy()
2285808f684SSatish Balay
2295808f684SSatish Balay    def testInvertBlockDiagonal(self):
230*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
2315808f684SSatish Balay        try:
2325808f684SSatish Balay            _ = len(self.BSIZE)
2335808f684SSatish Balay            return
2345808f684SSatish Balay        except (TypeError, ValueError):
2355808f684SSatish Balay            pass
2365808f684SSatish Balay        self._preallocate()
2375808f684SSatish Balay        rbs, cbs = self.A.getBlockSizes()
2385808f684SSatish Balay        if rbs != cbs: return
2395808f684SSatish Balay        self._set_values_ijv()
2405808f684SSatish Balay        self.A.assemble()
2415808f684SSatish Balay        self.A.shift(1000) # Make nonsingular
2425808f684SSatish Balay        ibdiag = self.A.invertBlockDiagonal()
2435808f684SSatish Balay        bs = self.A.getBlockSize()
2445808f684SSatish Balay        m, _ = self.A.getLocalSize()
2455808f684SSatish Balay        self.assertEqual(ibdiag.shape, (m//bs, bs, bs))
2465808f684SSatish Balay        tmp = N.empty((m//bs, bs, bs), dtype=PETSc.ScalarType)
2475808f684SSatish Balay        rstart, rend = self.A.getOwnershipRange()
2485808f684SSatish Balay        s, e = rstart//bs, rend//bs
2495808f684SSatish Balay        for i in range(s, e):
2505808f684SSatish Balay            rows = cols = N.arange(i*bs,(i+1)*bs, dtype=PETSc.IntType)
2515808f684SSatish Balay            vals = self.A.getValues(rows,cols)
2525808f684SSatish Balay            tmp[i-s,:,:] = N.linalg.inv(vals)
2535808f684SSatish Balay        self.assertTrue(N.allclose(ibdiag, tmp))
2545808f684SSatish Balay
2555808f684SSatish Balay    def testCreateSubMatrix(self):
2565808f684SSatish Balay        if 'baij' in self.A.getType(): return # XXX
2575808f684SSatish Balay        self._preallocate()
2585808f684SSatish Balay        self._set_values_ijv()
2595808f684SSatish Balay        self.A.assemble()
2605808f684SSatish Balay        #
2615808f684SSatish Balay        rank = self.A.getComm().getRank()
2625808f684SSatish Balay        rs, re = self.A.getOwnershipRange()
2635808f684SSatish Balay        cs, ce = self.A.getOwnershipRangeColumn()
2645808f684SSatish Balay        rows = N.array(range(rs, re), dtype=PETSc.IntType)
2655808f684SSatish Balay        cols = N.array(range(cs, ce), dtype=PETSc.IntType)
2665808f684SSatish Balay        rows = PETSc.IS().createGeneral(rows, comm=self.A.getComm())
2675808f684SSatish Balay        cols = PETSc.IS().createGeneral(cols, comm=self.A.getComm())
2685808f684SSatish Balay        #
2695808f684SSatish Balay        S = self.A.createSubMatrix(rows, None)
2705808f684SSatish Balay        S.zeroEntries()
2715808f684SSatish Balay        self.A.createSubMatrix(rows, None, S)
2725808f684SSatish Balay        S.destroy()
2735808f684SSatish Balay        #
2745808f684SSatish Balay        S = self.A.createSubMatrix(rows, cols)
2755808f684SSatish Balay        S.zeroEntries()
2765808f684SSatish Balay        self.A.createSubMatrix(rows, cols, S)
2775808f684SSatish Balay        S.destroy()
2785808f684SSatish Balay
2795808f684SSatish Balay    def testCreateSubMatrices(self):
2805808f684SSatish Balay        if 'baij' in self.A.getType(): return # XXX
281*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
2825808f684SSatish Balay        self._preallocate()
2835808f684SSatish Balay        self._set_values_ijv()
2845808f684SSatish Balay        self.A.assemble()
2855808f684SSatish Balay        #
2865808f684SSatish Balay        rs, re = self.A.getOwnershipRange()
2875808f684SSatish Balay        cs, ce = self.A.getOwnershipRangeColumn()
2885808f684SSatish Balay        rows = N.array(range(rs, re), dtype=PETSc.IntType)
2895808f684SSatish Balay        cols = N.array(range(cs, ce), dtype=PETSc.IntType)
2905808f684SSatish Balay        rows = PETSc.IS().createGeneral(rows, comm=self.A.getComm())
2915808f684SSatish Balay        cols = PETSc.IS().createGeneral(cols, comm=self.A.getComm())
2925808f684SSatish Balay        #
2935808f684SSatish Balay        (S,) = self.A.createSubMatrices(rows, cols)
2945808f684SSatish Balay        S.zeroEntries()
2955808f684SSatish Balay        self.A.createSubMatrices(rows, cols, submats=[S])
2965808f684SSatish Balay        S.destroy()
2975808f684SSatish Balay        #
2985808f684SSatish Balay        (S1,) = self.A.createSubMatrices([rows], [cols])
2995808f684SSatish Balay        (S2,) = self.A.createSubMatrices([rows], [cols])
3005808f684SSatish Balay        self.assertTrue(S1.equal(S2))
3015808f684SSatish Balay        S2.zeroEntries()
3025808f684SSatish Balay        self.A.createSubMatrices([rows], [cols], [S2])
3035808f684SSatish Balay        self.assertTrue(S1.equal(S2))
3045808f684SSatish Balay        S1.destroy()
3055808f684SSatish Balay        S2.destroy()
3065808f684SSatish Balay        #
3075808f684SSatish Balay        if 'seq' not in self.A.getType(): return # XXX
3085808f684SSatish Balay        S1, S2 = self.A.createSubMatrices([rows, rows], [cols, cols])
3095808f684SSatish Balay        self.assertTrue(S1.equal(S2))
3105808f684SSatish Balay        S1.zeroEntries()
3115808f684SSatish Balay        S2.zeroEntries()
3125808f684SSatish Balay        self.A.createSubMatrices([rows, rows], [cols, cols], [S1, S2])
3135808f684SSatish Balay        self.assertTrue(S1.equal(S2))
3145808f684SSatish Balay        S1.destroy()
3155808f684SSatish Balay        S2.destroy()
3165808f684SSatish Balay
3175808f684SSatish Balay    def testGetRedundantMatrix(self):
3185808f684SSatish Balay        if 'aijcrl' in self.A.getType(): return # duplicate not supported
3195808f684SSatish Balay        if 'mpisbaij' in self.A.getType(): return # not working
320*fc989267SStefano Zampini        if 'is' in self.A.getType(): return # XXX
3215808f684SSatish Balay        self._preallocate()
3225808f684SSatish Balay        self._set_values_ijv()
3235808f684SSatish Balay        self.A.assemble()
3245808f684SSatish Balay        #Test the most simple case
3255808f684SSatish Balay        sizecommA = self.A.getComm().getSize()
3265808f684SSatish Balay        Ared = self.A.getRedundantMatrix(sizecommA)
3275808f684SSatish Balay        sizecommAred = Ared.getComm().getSize()
3285808f684SSatish Balay        self.assertEqual(1, sizecommAred)
3295808f684SSatish Balay        Ared.destroy()
3305808f684SSatish Balay
3315808f684SSatish Balay    def testCreateTranspose(self):
3325808f684SSatish Balay        self._preallocate()
3335808f684SSatish Balay        self._set_values_ijv()
3345808f684SSatish Balay        self.A.assemble()
3355808f684SSatish Balay        A = self.A
3365808f684SSatish Balay        AT = PETSc.Mat().createTranspose(A)
3375808f684SSatish Balay        x, y = A.createVecs()
3385808f684SSatish Balay        xt, yt = AT.createVecs()
3395808f684SSatish Balay        #
3405808f684SSatish Balay        y.setRandom()
3415808f684SSatish Balay        A.multTranspose(y, x)
3425808f684SSatish Balay        y.copy(xt)
3435808f684SSatish Balay        AT.mult(xt, yt)
3445808f684SSatish Balay        self.assertTrue(yt.equal(x))
3455808f684SSatish Balay        #
3465808f684SSatish Balay        x.setRandom()
3475808f684SSatish Balay        A.mult(x, y)
3485808f684SSatish Balay        x.copy(yt)
3495808f684SSatish Balay        AT.multTranspose(yt, xt)
3505808f684SSatish Balay        self.assertTrue(xt.equal(y))
3515808f684SSatish Balay
3525808f684SSatish Balay    def _get_aijv(self):
3535808f684SSatish Balay        return (self.rows, self.xadj, self.adjy, self.vals,)
3545808f684SSatish Balay
3555808f684SSatish Balay    def _preallocate(self):
3565808f684SSatish Balay        self.A.setPreallocationNNZ([5, 2])
3575808f684SSatish Balay
3585808f684SSatish Balay    def _set_values(self):
3595808f684SSatish Balay        import sys
3605808f684SSatish Balay        if hasattr(sys, 'gettotalrefcount'):
3615808f684SSatish Balay            return self._set_values_ijv()
3625808f684SSatish Balay        # XXX Why the code below leak refs as a beast ???
3635808f684SSatish Balay        row, ai, aj, av =self._get_aijv()
3645808f684SSatish Balay        if not self.BSIZE:
3655808f684SSatish Balay            setvalues = self.A.setValues
3665808f684SSatish Balay        else:
3675808f684SSatish Balay            setvalues = self.A.setValuesBlocked
3685808f684SSatish Balay        for i, r in enumerate(row):
3695808f684SSatish Balay            s, e = ai[i], ai[i+1]
3705808f684SSatish Balay            setvalues(r, aj[s:e], av[s:e])
3715808f684SSatish Balay        return ai, aj, av
3725808f684SSatish Balay
3735808f684SSatish Balay    def _set_values_ijv(self):
3745808f684SSatish Balay        row, ai, aj, av =self._get_aijv()
3755808f684SSatish Balay        if not self.BSIZE:
3765808f684SSatish Balay            setvalues = self.A.setValuesIJV
3775808f684SSatish Balay        else:
3785808f684SSatish Balay            setvalues = self.A.setValuesBlockedIJV
3795808f684SSatish Balay        setvalues(ai, aj, av, rowmap=row)
3805808f684SSatish Balay        setvalues(ai, aj, av, rowmap=None)
3815808f684SSatish Balay        return ai, aj, av
3825808f684SSatish Balay
3835808f684SSatish Balay    def _chk_bs(self, A, bs):
3845808f684SSatish Balay        self.assertEqual(A.getBlockSize(), bs or 1)
3855808f684SSatish Balay
3865808f684SSatish Balay    def _chk_bsizes(self, A, bsizes):
3875808f684SSatish Balay        try:
3885808f684SSatish Balay            rbs, cbs = bsizes
3895808f684SSatish Balay        except (TypeError, ValueError):
3905808f684SSatish Balay            rbs = cbs = bsizes
3915808f684SSatish Balay        self.assertEqual(A.getBlockSizes(), (rbs, cbs))
3925808f684SSatish Balay
3935808f684SSatish Balay    def _chk_aij(self, A, i, j):
3945808f684SSatish Balay        compressed = bool(self.BSIZE)
3955808f684SSatish Balay        ai, aj = A.getRowIJ(compressed=compressed)
3965808f684SSatish Balay        if ai is not None and aj is not None:
3975808f684SSatish Balay            self.assertTrue(N.all(i==ai))
3985808f684SSatish Balay            self.assertTrue(N.all(j==aj))
3995808f684SSatish Balay        ai, aj = A.getColumnIJ(compressed=compressed)
4005808f684SSatish Balay        if ai is not None and aj is not None:
4015808f684SSatish Balay            self.assertTrue(N.all(i==ai))
4025808f684SSatish Balay            self.assertTrue(N.all(j==aj))
4035808f684SSatish Balay
4045808f684SSatish Balay# -- AIJ ---------------------
4055808f684SSatish Balay
4065808f684SSatish Balayclass BaseTestMatAIJ(BaseTestMatAnyAIJ, unittest.TestCase):
4075808f684SSatish Balay    COMM  = PETSc.COMM_WORLD
4085808f684SSatish Balay    TYPE  = PETSc.Mat.Type.AIJ
4095808f684SSatish Balay    GRID  = 0, 0
4105808f684SSatish Balay    BSIZE = None
4115808f684SSatish Balay
4125808f684SSatish Balay# -- Seq AIJ --
4135808f684SSatish Balay
4145808f684SSatish Balayclass TestMatSeqAIJ(BaseTestMatAIJ):
4155808f684SSatish Balay    COMM = PETSc.COMM_SELF
4165808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQAIJ
4175808f684SSatish Balayclass TestMatSeqAIJ_G23(TestMatSeqAIJ):
4185808f684SSatish Balay    GRID  = 2, 3
4195808f684SSatish Balayclass TestMatSeqAIJ_G45(TestMatSeqAIJ):
4205808f684SSatish Balay    GRID  = 4, 5
4215808f684SSatish Balayclass TestMatSeqAIJ_G89(TestMatSeqAIJ):
4225808f684SSatish Balay    GRID  = 8, 9
4235808f684SSatish Balay
4245808f684SSatish Balay# -- MPI AIJ --
4255808f684SSatish Balay
4265808f684SSatish Balayclass TestMatMPIAIJ(BaseTestMatAIJ):
4275808f684SSatish Balay    COMM = PETSc.COMM_WORLD
4285808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPIAIJ
4295808f684SSatish Balayclass TestMatMPIAIJ_G23(TestMatMPIAIJ):
4305808f684SSatish Balay    GRID  = 2, 3
4315808f684SSatish Balayclass TestMatMPIAIJ_G45(TestMatMPIAIJ):
4325808f684SSatish Balay    GRID  = 4, 5
4335808f684SSatish Balayclass TestMatMPIAIJ_G89(TestMatMPIAIJ):
4345808f684SSatish Balay    GRID  = 8, 9
4355808f684SSatish Balay
4365808f684SSatish Balay
4375808f684SSatish Balay# -- Block AIJ ---------------
4385808f684SSatish Balay
4395808f684SSatish Balayclass BaseTestMatBAIJ(BaseTestMatAnyAIJ, unittest.TestCase):
4405808f684SSatish Balay    COMM  = PETSc.COMM_WORLD
4415808f684SSatish Balay    TYPE  = PETSc.Mat.Type.BAIJ
4425808f684SSatish Balay    GRID  = 0, 0
4435808f684SSatish Balay    BSIZE = 1
4445808f684SSatish Balay
4455808f684SSatish Balay# -- Seq Block AIJ --
4465808f684SSatish Balay
4475808f684SSatish Balayclass TestMatSeqBAIJ(BaseTestMatBAIJ):
4485808f684SSatish Balay    COMM = PETSc.COMM_SELF
4495808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQBAIJ
4505808f684SSatish Balay# bs = 1
4515808f684SSatish Balayclass TestMatSeqBAIJ_G23(TestMatSeqBAIJ):
4525808f684SSatish Balay    GRID  = 2, 3
4535808f684SSatish Balayclass TestMatSeqBAIJ_G45(TestMatSeqBAIJ):
4545808f684SSatish Balay    GRID  = 4, 5
4555808f684SSatish Balayclass TestMatSeqBAIJ_G89(TestMatSeqBAIJ):
4565808f684SSatish Balay    GRID  = 8, 9
4575808f684SSatish Balay# bs = 2
4585808f684SSatish Balayclass TestMatSeqBAIJ_G23_B2(TestMatSeqBAIJ_G23):
4595808f684SSatish Balay    BSIZE = 2
4605808f684SSatish Balayclass TestMatSeqBAIJ_G45_B2(TestMatSeqBAIJ_G45):
4615808f684SSatish Balay    BSIZE = 2
4625808f684SSatish Balayclass TestMatSeqBAIJ_G89_B2(TestMatSeqBAIJ_G89):
4635808f684SSatish Balay    BSIZE = 2
4645808f684SSatish Balay# bs = 3
4655808f684SSatish Balayclass TestMatSeqBAIJ_G23_B3(TestMatSeqBAIJ_G23):
4665808f684SSatish Balay    BSIZE = 3
4675808f684SSatish Balayclass TestMatSeqBAIJ_G45_B3(TestMatSeqBAIJ_G45):
4685808f684SSatish Balay    BSIZE = 3
4695808f684SSatish Balayclass TestMatSeqBAIJ_G89_B3(TestMatSeqBAIJ_G89):
4705808f684SSatish Balay    BSIZE = 3
4715808f684SSatish Balay# bs = 4
4725808f684SSatish Balayclass TestMatSeqBAIJ_G23_B4(TestMatSeqBAIJ_G23):
4735808f684SSatish Balay    BSIZE = 4
4745808f684SSatish Balayclass TestMatSeqBAIJ_G45_B4(TestMatSeqBAIJ_G45):
4755808f684SSatish Balay    BSIZE = 4
4765808f684SSatish Balayclass TestMatSeqBAIJ_G89_B4(TestMatSeqBAIJ_G89):
4775808f684SSatish Balay    BSIZE = 4
4785808f684SSatish Balay# bs = 5
4795808f684SSatish Balayclass TestMatSeqBAIJ_G23_B5(TestMatSeqBAIJ_G23):
4805808f684SSatish Balay    BSIZE = 5
4815808f684SSatish Balayclass TestMatSeqBAIJ_G45_B5(TestMatSeqBAIJ_G45):
4825808f684SSatish Balay    BSIZE = 5
4835808f684SSatish Balayclass TestMatSeqBAIJ_G89_B5(TestMatSeqBAIJ_G89):
4845808f684SSatish Balay    BSIZE = 5
4855808f684SSatish Balay
4865808f684SSatish Balay
4875808f684SSatish Balay# -- MPI Block AIJ --
4885808f684SSatish Balay
4895808f684SSatish Balayclass TestMatMPIBAIJ(BaseTestMatBAIJ):
4905808f684SSatish Balay    COMM = PETSc.COMM_WORLD
4915808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPIBAIJ
4925808f684SSatish Balay# bs = 1
4935808f684SSatish Balayclass TestMatMPIBAIJ_G23(TestMatMPIBAIJ):
4945808f684SSatish Balay    GRID  = 2, 3
4955808f684SSatish Balayclass TestMatMPIBAIJ_G45(TestMatMPIBAIJ):
4965808f684SSatish Balay    GRID  = 4, 5
4975808f684SSatish Balayclass TestMatMPIBAIJ_G89(TestMatMPIBAIJ):
4985808f684SSatish Balay    GRID  = 8, 9
4995808f684SSatish Balay# bs = 2
5005808f684SSatish Balayclass TestMatMPIBAIJ_G23_B2(TestMatMPIBAIJ_G23):
5015808f684SSatish Balay    BSIZE = 2
5025808f684SSatish Balayclass TestMatMPIBAIJ_G45_B2(TestMatMPIBAIJ_G45):
5035808f684SSatish Balay    BSIZE = 2
5045808f684SSatish Balayclass TestMatMPIBAIJ_G89_B2(TestMatMPIBAIJ_G89):
5055808f684SSatish Balay    BSIZE = 2
5065808f684SSatish Balay# bs = 3
5075808f684SSatish Balayclass TestMatMPIBAIJ_G23_B3(TestMatMPIBAIJ_G23):
5085808f684SSatish Balay    BSIZE = 3
5095808f684SSatish Balayclass TestMatMPIBAIJ_G45_B3(TestMatMPIBAIJ_G45):
5105808f684SSatish Balay    BSIZE = 3
5115808f684SSatish Balayclass TestMatMPIBAIJ_G89_B3(TestMatMPIBAIJ_G89):
5125808f684SSatish Balay    BSIZE = 3
5135808f684SSatish Balay# bs = 4
5145808f684SSatish Balayclass TestMatMPIBAIJ_G23_B4(TestMatMPIBAIJ_G23):
5155808f684SSatish Balay    BSIZE = 4
5165808f684SSatish Balayclass TestMatMPIBAIJ_G45_B4(TestMatMPIBAIJ_G45):
5175808f684SSatish Balay    BSIZE = 4
5185808f684SSatish Balayclass TestMatMPIBAIJ_G89_B4(TestMatMPIBAIJ_G89):
5195808f684SSatish Balay    BSIZE = 4
5205808f684SSatish Balay# bs = 5
5215808f684SSatish Balayclass TestMatMPIBAIJ_G23_B5(TestMatMPIBAIJ_G23):
5225808f684SSatish Balay    BSIZE = 5
5235808f684SSatish Balayclass TestMatMPIBAIJ_G45_B5(TestMatMPIBAIJ_G45):
5245808f684SSatish Balay    BSIZE = 5
5255808f684SSatish Balayclass TestMatMPIBAIJ_G89_B5(TestMatMPIBAIJ_G89):
5265808f684SSatish Balay    BSIZE = 5
5275808f684SSatish Balay
5285808f684SSatish Balay# -- SymmBlock AIJ ---------------
5295808f684SSatish Balay
5305808f684SSatish Balayclass BaseTestMatSBAIJ(BaseTestMatAnyAIJ, unittest.TestCase):
5315808f684SSatish Balay    COMM  = PETSc.COMM_WORLD
5325808f684SSatish Balay    TYPE  = PETSc.Mat.Type.SBAIJ
5335808f684SSatish Balay    GRID  = 0, 0
5345808f684SSatish Balay    BSIZE = 1
5355808f684SSatish Balay    def testInvertBlockDiagonal(self): pass
5365808f684SSatish Balay    def _chk_aij(self, A, i, j):
5375808f684SSatish Balay        ai, aj = A.getRowIJ(compressed=True)
5385808f684SSatish Balay        if ai is not None and aj is not None:
5395808f684SSatish Balay            if 0: # XXX Implement
5405808f684SSatish Balay                self.assertTrue(N.all(i==ai))
5415808f684SSatish Balay                self.assertTrue(N.all(j==aj))
5425808f684SSatish Balay        ai, aj = A.getColumnIJ(compressed=True)
5435808f684SSatish Balay        if ai is not None and aj is not None:
5445808f684SSatish Balay            if 0: # XXX Implement
5455808f684SSatish Balay                self.assertTrue(N.all(i==ai))
5465808f684SSatish Balay                self.assertTrue(N.all(j==aj))
5475808f684SSatish Balay
5485808f684SSatish Balay# -- Seq SymmBlock AIJ --
5495808f684SSatish Balay
5505808f684SSatish Balayclass TestMatSeqSBAIJ(BaseTestMatSBAIJ):
5515808f684SSatish Balay    COMM = PETSc.COMM_SELF
5525808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQSBAIJ
5535808f684SSatish Balay# bs = 1
5545808f684SSatish Balayclass TestMatSeqSBAIJ_G23(TestMatSeqSBAIJ):
5555808f684SSatish Balay    GRID  = 2, 3
5565808f684SSatish Balayclass TestMatSeqSBAIJ_G45(TestMatSeqSBAIJ):
5575808f684SSatish Balay    GRID  = 4, 5
5585808f684SSatish Balayclass TestMatSeqSBAIJ_G89(TestMatSeqSBAIJ):
5595808f684SSatish Balay    GRID  = 8, 9
5605808f684SSatish Balay# bs = 2
5615808f684SSatish Balayclass TestMatSeqSBAIJ_G23_B2(TestMatSeqSBAIJ_G23):
5625808f684SSatish Balay    BSIZE = 2
5635808f684SSatish Balayclass TestMatSeqSBAIJ_G45_B2(TestMatSeqSBAIJ_G45):
5645808f684SSatish Balay    BSIZE = 2
5655808f684SSatish Balayclass TestMatSeqSBAIJ_G89_B2(TestMatSeqSBAIJ_G89):
5665808f684SSatish Balay    BSIZE = 2
5675808f684SSatish Balay# bs = 3
5685808f684SSatish Balayclass TestMatSeqSBAIJ_G23_B3(TestMatSeqSBAIJ_G23):
5695808f684SSatish Balay    BSIZE = 3
5705808f684SSatish Balayclass TestMatSeqSBAIJ_G45_B3(TestMatSeqSBAIJ_G45):
5715808f684SSatish Balay    BSIZE = 3
5725808f684SSatish Balayclass TestMatSeqSBAIJ_G89_B3(TestMatSeqSBAIJ_G89):
5735808f684SSatish Balay    BSIZE = 3
5745808f684SSatish Balay# bs = 4
5755808f684SSatish Balayclass TestMatSeqSBAIJ_G23_B4(TestMatSeqSBAIJ_G23):
5765808f684SSatish Balay    BSIZE = 4
5775808f684SSatish Balayclass TestMatSeqSBAIJ_G45_B4(TestMatSeqSBAIJ_G45):
5785808f684SSatish Balay    BSIZE = 4
5795808f684SSatish Balayclass TestMatSeqSBAIJ_G89_B4(TestMatSeqSBAIJ_G89):
5805808f684SSatish Balay    BSIZE = 4
5815808f684SSatish Balay# bs = 5
5825808f684SSatish Balayclass TestMatSeqSBAIJ_G23_B5(TestMatSeqSBAIJ_G23):
5835808f684SSatish Balay    BSIZE = 5
5845808f684SSatish Balayclass TestMatSeqSBAIJ_G45_B5(TestMatSeqSBAIJ_G45):
5855808f684SSatish Balay    BSIZE = 5
5865808f684SSatish Balayclass TestMatSeqSBAIJ_G89_B5(TestMatSeqSBAIJ_G89):
5875808f684SSatish Balay    BSIZE = 5
5885808f684SSatish Balay
5895808f684SSatish Balay
5905808f684SSatish Balay# -- MPI SymmBlock AIJ --
5915808f684SSatish Balay
5925808f684SSatish Balayclass TestMatMPISBAIJ(BaseTestMatSBAIJ):
5935808f684SSatish Balay    COMM = PETSc.COMM_WORLD
5945808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPISBAIJ
5955808f684SSatish Balay# bs = 1
5965808f684SSatish Balayclass TestMatMPISBAIJ_G23(TestMatMPISBAIJ):
5975808f684SSatish Balay    GRID  = 2, 3
5985808f684SSatish Balayclass TestMatMPISBAIJ_G45(TestMatMPISBAIJ):
5995808f684SSatish Balay    GRID  = 4, 5
6005808f684SSatish Balayclass TestMatMPISBAIJ_G89(TestMatMPISBAIJ):
6015808f684SSatish Balay    GRID  = 8, 9
6025808f684SSatish Balay# bs = 2
6035808f684SSatish Balayclass TestMatMPISBAIJ_G23_B2(TestMatMPISBAIJ_G23):
6045808f684SSatish Balay    BSIZE = 2
6055808f684SSatish Balayclass TestMatMPISBAIJ_G45_B2(TestMatMPISBAIJ_G45):
6065808f684SSatish Balay    BSIZE = 2
6075808f684SSatish Balayclass TestMatMPISBAIJ_G89_B2(TestMatMPISBAIJ_G89):
6085808f684SSatish Balay    BSIZE = 2
6095808f684SSatish Balay# bs = 3
6105808f684SSatish Balayclass TestMatMPISBAIJ_G23_B3(TestMatMPISBAIJ_G23):
6115808f684SSatish Balay    BSIZE = 3
6125808f684SSatish Balayclass TestMatMPISBAIJ_G45_B3(TestMatMPISBAIJ_G45):
6135808f684SSatish Balay    BSIZE = 3
6145808f684SSatish Balayclass TestMatMPISBAIJ_G89_B3(TestMatMPISBAIJ_G89):
6155808f684SSatish Balay    BSIZE = 3
6165808f684SSatish Balay# bs = 4
6175808f684SSatish Balayclass TestMatMPISBAIJ_G23_B4(TestMatMPISBAIJ_G23):
6185808f684SSatish Balay    BSIZE = 4
6195808f684SSatish Balayclass TestMatMPISBAIJ_G45_B4(TestMatMPISBAIJ_G45):
6205808f684SSatish Balay    BSIZE = 4
6215808f684SSatish Balayclass TestMatMPISBAIJ_G89_B4(TestMatMPISBAIJ_G89):
6225808f684SSatish Balay    BSIZE = 4
6235808f684SSatish Balay# bs = 5
6245808f684SSatish Balayclass TestMatMPISBAIJ_G23_B5(TestMatMPISBAIJ_G23):
6255808f684SSatish Balay    BSIZE = 5
6265808f684SSatish Balayclass TestMatMPISBAIJ_G45_B5(TestMatMPISBAIJ_G45):
6275808f684SSatish Balay    BSIZE = 5
6285808f684SSatish Balayclass TestMatMPISBAIJ_G89_B5(TestMatMPISBAIJ_G89):
6295808f684SSatish Balay    BSIZE = 5
6305808f684SSatish Balay
6315808f684SSatish Balay# -- AIJ + Block ---------------
6325808f684SSatish Balay
6335808f684SSatish Balayclass BaseTestMatAIJ_B(BaseTestMatAnyAIJ, unittest.TestCase):
6345808f684SSatish Balay    COMM  = PETSc.COMM_WORLD
6355808f684SSatish Balay    TYPE  = PETSc.Mat.Type.AIJ
6365808f684SSatish Balay    GRID  = 0, 0
6375808f684SSatish Balay    BSIZE = 1
6385808f684SSatish Balay
6395808f684SSatish Balay    def testSetPreallocNNZ(self):pass
6405808f684SSatish Balay    def testSetPreallocNNZ_2(self):pass
6415808f684SSatish Balay    def testSetPreallocCSR(self):pass
6425808f684SSatish Balay    def testSetPreallocCSR_2(self):pass
6435808f684SSatish Balay    def testSetValues(self):
6445808f684SSatish Balay        self._preallocate()
6455808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
6465808f684SSatish Balay        self.A.setOption(opt, True)
6475808f684SSatish Balay        ai, aj, av = self._set_values()
6485808f684SSatish Balay        self.A.assemble()
6495808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
6505808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
6515808f684SSatish Balay        self.A.setOption(opt, True)
6525808f684SSatish Balay        ai, aj, av = self._set_values()
6535808f684SSatish Balay        self.A.assemble()
6545808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
6555808f684SSatish Balay    def testSetValuesIJV(self):
6565808f684SSatish Balay        self._preallocate()
6575808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
6585808f684SSatish Balay        self.A.setOption(opt, True)
6595808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
6605808f684SSatish Balay        self.A.assemble()
6615808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
6625808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
6635808f684SSatish Balay        self.A.setOption(opt, True)
6645808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
6655808f684SSatish Balay        self.A.assemble()
6665808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
6675808f684SSatish Balay    def _preallocate(self):
6685808f684SSatish Balay        self.A.setPreallocationNNZ([5*self.BSIZE, 3*self.BSIZE])
6695808f684SSatish Balay        self._chk_bs(self.A, self.BSIZE)
6705808f684SSatish Balay    def _chk_aij(self, A, i, j):
6715808f684SSatish Balay        bs = self.BSIZE or 1
6725808f684SSatish Balay        ai, aj = A.getRowIJ()
6735808f684SSatish Balay        if ai is not None and aj is not None:  ## XXX map and check !!
6745808f684SSatish Balay            #self.assertTrue(N.all(i==ai))
6755808f684SSatish Balay            #self.assertTrue(N.all(j==aj))
6765808f684SSatish Balay            pass
6775808f684SSatish Balay        ai, aj = A.getColumnIJ(compressed=bool(self.BSIZE))
6785808f684SSatish Balay        if ai is not None and aj is not None: ## XXX map and check !!
6795808f684SSatish Balay            #self.assertTrue(N.all(i==ai))
6805808f684SSatish Balay            #self.assertTrue(N.all(j==aj))
6815808f684SSatish Balay            pass
6825808f684SSatish Balay
6835808f684SSatish Balay# -- Seq AIJ + Block --
6845808f684SSatish Balay
6855808f684SSatish Balayclass TestMatSeqAIJ_B(BaseTestMatAIJ_B):
6865808f684SSatish Balay    COMM = PETSc.COMM_SELF
6875808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQAIJ
6885808f684SSatish Balay# bs = 1
6895808f684SSatish Balayclass TestMatSeqAIJ_B_G23(TestMatSeqAIJ_B):
6905808f684SSatish Balay    GRID  = 2, 3
6915808f684SSatish Balayclass TestMatSeqAIJ_B_G45(TestMatSeqAIJ_B):
6925808f684SSatish Balay    GRID  = 4, 5
6935808f684SSatish Balayclass TestMatSeqAIJ_B_G89(TestMatSeqAIJ_B):
6945808f684SSatish Balay    GRID  = 8, 9
6955808f684SSatish Balay# bs = 2
6965808f684SSatish Balayclass TestMatSeqAIJ_B_G23_B2(TestMatSeqAIJ_B_G23):
6975808f684SSatish Balay    BSIZE = 2
6985808f684SSatish Balayclass TestMatSeqAIJ_B_G45_B2(TestMatSeqAIJ_B_G45):
6995808f684SSatish Balay    BSIZE = 2
7005808f684SSatish Balayclass TestMatSeqAIJ_B_G89_B2(TestMatSeqAIJ_B_G89):
7015808f684SSatish Balay    BSIZE = 2
7025808f684SSatish Balay# bs = 3
7035808f684SSatish Balayclass TestMatSeqAIJ_B_G23_B3(TestMatSeqAIJ_B_G23):
7045808f684SSatish Balay    BSIZE = 3
7055808f684SSatish Balayclass TestMatSeqAIJ_B_G45_B3(TestMatSeqAIJ_B_G45):
7065808f684SSatish Balay    BSIZE = 3
7075808f684SSatish Balayclass TestMatSeqAIJ_B_G89_B3(TestMatSeqAIJ_B_G89):
7085808f684SSatish Balay    BSIZE = 3
7095808f684SSatish Balay# bs = 4
7105808f684SSatish Balayclass TestMatSeqAIJ_B_G23_B4(TestMatSeqAIJ_B_G23):
7115808f684SSatish Balay    BSIZE = 4
7125808f684SSatish Balayclass TestMatSeqAIJ_B_G45_B4(TestMatSeqAIJ_B_G45):
7135808f684SSatish Balay    BSIZE = 4
7145808f684SSatish Balayclass TestMatSeqAIJ_B_G89_B4(TestMatSeqAIJ_B_G89):
7155808f684SSatish Balay    BSIZE = 4
7165808f684SSatish Balay# bs = 5
7175808f684SSatish Balayclass TestMatSeqAIJ_B_G23_B5(TestMatSeqAIJ_B_G23):
7185808f684SSatish Balay    BSIZE = 5
7195808f684SSatish Balayclass TestMatSeqAIJ_B_G45_B5(TestMatSeqAIJ_B_G45):
7205808f684SSatish Balay    BSIZE = 5
7215808f684SSatish Balayclass TestMatSeqAIJ_B_G89_B5(TestMatSeqAIJ_B_G89):
7225808f684SSatish Balay    BSIZE = 5
7235808f684SSatish Balay
7245808f684SSatish Balay
7255808f684SSatish Balay# -- MPI AIJ + Block --
7265808f684SSatish Balay
7275808f684SSatish Balayclass TestMatMPIAIJ_B(BaseTestMatAIJ_B):
7285808f684SSatish Balay    COMM = PETSc.COMM_WORLD
7295808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPIAIJ
7305808f684SSatish Balay# bs = 1
7315808f684SSatish Balayclass TestMatMPIAIJ_B_G23(TestMatMPIAIJ_B):
7325808f684SSatish Balay    GRID  = 2, 3
7335808f684SSatish Balayclass TestMatMPIAIJ_B_G45(TestMatMPIAIJ_B):
7345808f684SSatish Balay    GRID  = 4, 5
7355808f684SSatish Balayclass TestMatMPIAIJ_B_G89(TestMatMPIAIJ_B):
7365808f684SSatish Balay    GRID  = 8, 9
7375808f684SSatish Balay# bs = 2
7385808f684SSatish Balayclass TestMatMPIAIJ_B_G23_B2(TestMatMPIAIJ_B_G23):
7395808f684SSatish Balay    BSIZE = 2
7405808f684SSatish Balayclass TestMatMPIAIJ_B_G45_B2(TestMatMPIAIJ_B_G45):
7415808f684SSatish Balay    BSIZE = 2
7425808f684SSatish Balayclass TestMatMPIAIJ_B_G89_B2(TestMatMPIAIJ_B_G89):
7435808f684SSatish Balay    BSIZE = 2
7445808f684SSatish Balay# bs = 3
7455808f684SSatish Balayclass TestMatMPIAIJ_B_G23_B3(TestMatMPIAIJ_B_G23):
7465808f684SSatish Balay    BSIZE = 3
7475808f684SSatish Balayclass TestMatMPIAIJ_B_G45_B3(TestMatMPIAIJ_B_G45):
7485808f684SSatish Balay    BSIZE = 3
7495808f684SSatish Balayclass TestMatMPIAIJ_B_G89_B3(TestMatMPIAIJ_B_G89):
7505808f684SSatish Balay    BSIZE = 3
7515808f684SSatish Balay# bs = 4
7525808f684SSatish Balayclass TestMatMPIAIJ_B_G23_B4(TestMatMPIAIJ_B_G23):
7535808f684SSatish Balay    BSIZE = 4
7545808f684SSatish Balayclass TestMatMPIAIJ_B_G45_B4(TestMatMPIAIJ_B_G45):
7555808f684SSatish Balay    BSIZE = 4
7565808f684SSatish Balayclass TestMatMPIAIJ_B_G89_B4(TestMatMPIAIJ_B_G89):
7575808f684SSatish Balay    BSIZE = 4
7585808f684SSatish Balay# bs = 5
7595808f684SSatish Balayclass TestMatMPIAIJ_B_G23_B5(TestMatMPIAIJ_B_G23):
7605808f684SSatish Balay    BSIZE = 5
7615808f684SSatish Balayclass TestMatMPIAIJ_B_G45_B5(TestMatMPIAIJ_B_G45):
7625808f684SSatish Balay    BSIZE = 5
7635808f684SSatish Balayclass TestMatMPIAIJ_B_G89_B5(TestMatMPIAIJ_B_G89):
7645808f684SSatish Balay    BSIZE = 5
7655808f684SSatish Balay
7665808f684SSatish Balay# -- Non-square blocks --
7675808f684SSatish Balayclass BaseTestMatAIJ_B(BaseTestMatAnyAIJ, unittest.TestCase):
7685808f684SSatish Balay    COMM  = PETSc.COMM_WORLD
7695808f684SSatish Balay    TYPE  = PETSc.Mat.Type.AIJ
7705808f684SSatish Balay    GRID  = 0, 0
7715808f684SSatish Balay    BSIZE = 4, 2
7725808f684SSatish Balay
7735808f684SSatish Balay    def _preallocate(self):
7745808f684SSatish Balay        try:
7755808f684SSatish Balay            rbs, cbs = self.BSIZE
7765808f684SSatish Balay        except (TypeError, ValueError):
7775808f684SSatish Balay            rbs = cbs = self.BSIZE
7785808f684SSatish Balay        self.A.setPreallocationNNZ([5*rbs, 3*cbs])
7795808f684SSatish Balay        self._chk_bsizes(self.A, self.BSIZE)
7805808f684SSatish Balay    def testSetPreallocNNZ(self):pass
7815808f684SSatish Balay    def testSetPreallocNNZ_2(self):pass
7825808f684SSatish Balay    def testSetPreallocCSR(self):pass
7835808f684SSatish Balay    def testSetPreallocCSR_2(self):pass
7845808f684SSatish Balay    def testSetValues(self):
7855808f684SSatish Balay        self._preallocate()
7865808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
7875808f684SSatish Balay        self.A.setOption(opt, True)
7885808f684SSatish Balay        ai, aj, av = self._set_values()
7895808f684SSatish Balay        self.A.assemble()
7905808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
7915808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
7925808f684SSatish Balay        self.A.setOption(opt, True)
7935808f684SSatish Balay        ai, aj, av = self._set_values()
7945808f684SSatish Balay        self.A.assemble()
7955808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
7965808f684SSatish Balay    def testSetValuesIJV(self):
7975808f684SSatish Balay        self._preallocate()
7985808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR
7995808f684SSatish Balay        self.A.setOption(opt, True)
8005808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
8015808f684SSatish Balay        self.A.assemble()
8025808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
8035808f684SSatish Balay        opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR
8045808f684SSatish Balay        self.A.setOption(opt, True)
8055808f684SSatish Balay        ai, aj, av = self._set_values_ijv()
8065808f684SSatish Balay        self.A.assemble()
8075808f684SSatish Balay        self._chk_aij(self.A, ai, aj)
8085808f684SSatish Balay    def _chk_aij(self, A, i, j):
8095808f684SSatish Balay        bs = self.BSIZE or 1
8105808f684SSatish Balay        ai, aj = A.getRowIJ()
8115808f684SSatish Balay        if ai is not None and aj is not None:  ## XXX map and check !!
8125808f684SSatish Balay            #self.assertTrue(N.all(i==ai))
8135808f684SSatish Balay            #self.assertTrue(N.all(j==aj))
8145808f684SSatish Balay            pass
8155808f684SSatish Balay        ai, aj = A.getColumnIJ()
8165808f684SSatish Balay        if ai is not None and aj is not None: ## XXX map and check !!
8175808f684SSatish Balay            #self.assertTrue(N.all(i==ai))
8185808f684SSatish Balay            #self.assertTrue(N.all(j==aj))
8195808f684SSatish Balay            pass
8205808f684SSatish Balay
8215808f684SSatish Balay# -- AIJCRL ---------------------
8225808f684SSatish Balay
8235808f684SSatish Balayclass BaseTestMatAIJCRL(BaseTestMatAIJ, unittest.TestCase):
8245808f684SSatish Balay    TYPE  = PETSc.Mat.Type.AIJCRL
8255808f684SSatish Balay
8265808f684SSatish Balay# -- Seq AIJCRL --
8275808f684SSatish Balay
8285808f684SSatish Balayclass TestMatSeqAIJCRL(BaseTestMatAIJCRL):
8295808f684SSatish Balay    COMM = PETSc.COMM_SELF
8305808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQAIJCRL
8315808f684SSatish Balayclass TestMatSeqAIJCRL_G23(TestMatSeqAIJCRL):
8325808f684SSatish Balay    GRID  = 2, 3
8335808f684SSatish Balayclass TestMatSeqAIJCRL_G45(TestMatSeqAIJCRL):
8345808f684SSatish Balay    GRID  = 4, 5
8355808f684SSatish Balayclass TestMatSeqAIJCRL_G89(TestMatSeqAIJCRL):
8365808f684SSatish Balay    GRID  = 8, 9
8375808f684SSatish Balay
8385808f684SSatish Balay# -- MPI AIJCRL --
8395808f684SSatish Balay
8405808f684SSatish Balayclass TestMatMPIAIJCRL(BaseTestMatAIJCRL):
8415808f684SSatish Balay    COMM = PETSc.COMM_WORLD
8425808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPIAIJCRL
8435808f684SSatish Balayclass TestMatMPIAIJCRL_G23(TestMatMPIAIJCRL):
8445808f684SSatish Balay    GRID  = 2, 3
8455808f684SSatish Balayclass TestMatMPIAIJCRL_G45(TestMatMPIAIJCRL):
8465808f684SSatish Balay    GRID  = 4, 5
8475808f684SSatish Balayclass TestMatMPIAIJCRL_G89(TestMatMPIAIJCRL):
8485808f684SSatish Balay    GRID  = 8, 9
8495808f684SSatish Balay
8505808f684SSatish Balay# -- AIJCRL + Block -------------
8515808f684SSatish Balay
8525808f684SSatish Balayclass BaseTestMatAIJCRL_B(BaseTestMatAIJ_B, unittest.TestCase):
8535808f684SSatish Balay    TYPE  = PETSc.Mat.Type.AIJCRL
8545808f684SSatish Balay
8555808f684SSatish Balay# -- Seq AIJCRL + Block --
8565808f684SSatish Balay
8575808f684SSatish Balayclass TestMatSeqAIJCRL_B(BaseTestMatAIJCRL_B):
8585808f684SSatish Balay    COMM = PETSc.COMM_SELF
8595808f684SSatish Balay    TYPE = PETSc.Mat.Type.SEQAIJCRL
8605808f684SSatish Balay# bs = 1
8615808f684SSatish Balayclass TestMatSeqAIJCRL_B_G23(TestMatSeqAIJCRL_B):
8625808f684SSatish Balay    GRID  = 2, 3
8635808f684SSatish Balayclass TestMatSeqAIJCRL_B_G45(TestMatSeqAIJCRL_B):
8645808f684SSatish Balay    GRID  = 4, 5
8655808f684SSatish Balayclass TestMatSeqAIJCRL_B_G89(TestMatSeqAIJCRL_B):
8665808f684SSatish Balay    GRID  = 8, 9
8675808f684SSatish Balay# bs = 2
8685808f684SSatish Balayclass TestMatSeqAIJCRL_B_G23_B2(TestMatSeqAIJCRL_B_G23):
8695808f684SSatish Balay    BSIZE = 2
8705808f684SSatish Balayclass TestMatSeqAIJCRL_B_G45_B2(TestMatSeqAIJCRL_B_G45):
8715808f684SSatish Balay    BSIZE = 2
8725808f684SSatish Balayclass TestMatSeqAIJCRL_B_G89_B2(TestMatSeqAIJCRL_B_G89):
8735808f684SSatish Balay    BSIZE = 2
8745808f684SSatish Balay# bs = 3
8755808f684SSatish Balayclass TestMatSeqAIJCRL_B_G23_B3(TestMatSeqAIJCRL_B_G23):
8765808f684SSatish Balay    BSIZE = 3
8775808f684SSatish Balayclass TestMatSeqAIJCRL_B_G45_B3(TestMatSeqAIJCRL_B_G45):
8785808f684SSatish Balay    BSIZE = 3
8795808f684SSatish Balayclass TestMatSeqAIJCRL_B_G89_B3(TestMatSeqAIJCRL_B_G89):
8805808f684SSatish Balay    BSIZE = 3
8815808f684SSatish Balay# bs = 4
8825808f684SSatish Balayclass TestMatSeqAIJCRL_B_G23_B4(TestMatSeqAIJCRL_B_G23):
8835808f684SSatish Balay    BSIZE = 4
8845808f684SSatish Balayclass TestMatSeqAIJCRL_B_G45_B4(TestMatSeqAIJCRL_B_G45):
8855808f684SSatish Balay    BSIZE = 4
8865808f684SSatish Balayclass TestMatSeqAIJCRL_B_G89_B4(TestMatSeqAIJCRL_B_G89):
8875808f684SSatish Balay    BSIZE = 4
8885808f684SSatish Balay# bs = 5
8895808f684SSatish Balayclass TestMatSeqAIJCRL_B_G23_B5(TestMatSeqAIJCRL_B_G23):
8905808f684SSatish Balay    BSIZE = 5
8915808f684SSatish Balayclass TestMatSeqAIJCRL_B_G45_B5(TestMatSeqAIJCRL_B_G45):
8925808f684SSatish Balay    BSIZE = 5
8935808f684SSatish Balayclass TestMatSeqAIJCRL_B_G89_B5(TestMatSeqAIJCRL_B_G89):
8945808f684SSatish Balay    BSIZE = 5
8955808f684SSatish Balay
8965808f684SSatish Balay
8975808f684SSatish Balay# -- MPI AIJCRL + Block --
8985808f684SSatish Balay
8995808f684SSatish Balayclass TestMatMPIAIJCRL_B(BaseTestMatAIJCRL_B):
9005808f684SSatish Balay    COMM = PETSc.COMM_WORLD
9015808f684SSatish Balay    TYPE = PETSc.Mat.Type.MPIAIJCRL
9025808f684SSatish Balay# bs = 1
9035808f684SSatish Balayclass TestMatMPIAIJCRL_B_G23(TestMatMPIAIJCRL_B):
9045808f684SSatish Balay    GRID  = 2, 3
9055808f684SSatish Balayclass TestMatMPIAIJCRL_B_G45(TestMatMPIAIJCRL_B):
9065808f684SSatish Balay    GRID  = 4, 5
9075808f684SSatish Balayclass TestMatMPIAIJCRL_B_G89(TestMatMPIAIJCRL_B):
9085808f684SSatish Balay    GRID  = 8, 9
9095808f684SSatish Balay# bs = 2
9105808f684SSatish Balayclass TestMatMPIAIJCRL_B_G23_B2(TestMatMPIAIJCRL_B_G23):
9115808f684SSatish Balay    BSIZE = 2
9125808f684SSatish Balayclass TestMatMPIAIJCRL_B_G45_B2(TestMatMPIAIJCRL_B_G45):
9135808f684SSatish Balay    BSIZE = 2
9145808f684SSatish Balayclass TestMatMPIAIJCRL_B_G89_B2(TestMatMPIAIJCRL_B_G89):
9155808f684SSatish Balay    BSIZE = 2
9165808f684SSatish Balay# bs = 3
9175808f684SSatish Balayclass TestMatMPIAIJCRL_B_G23_B3(TestMatMPIAIJCRL_B_G23):
9185808f684SSatish Balay    BSIZE = 3
9195808f684SSatish Balayclass TestMatMPIAIJCRL_B_G45_B3(TestMatMPIAIJCRL_B_G45):
9205808f684SSatish Balay    BSIZE = 3
9215808f684SSatish Balayclass TestMatMPIAIJCRL_B_G89_B3(TestMatMPIAIJCRL_B_G89):
9225808f684SSatish Balay    BSIZE = 3
9235808f684SSatish Balay# bs = 4
9245808f684SSatish Balayclass TestMatMPIAIJCRL_B_G23_B4(TestMatMPIAIJCRL_B_G23):
9255808f684SSatish Balay    BSIZE = 4
9265808f684SSatish Balayclass TestMatMPIAIJCRL_B_G45_B4(TestMatMPIAIJCRL_B_G45):
9275808f684SSatish Balay    BSIZE = 4
9285808f684SSatish Balayclass TestMatMPIAIJCRL_B_G89_B4(TestMatMPIAIJCRL_B_G89):
9295808f684SSatish Balay    BSIZE = 4
9305808f684SSatish Balay# bs = 5
9315808f684SSatish Balayclass TestMatMPIAIJCRL_B_G23_B5(TestMatMPIAIJCRL_B_G23):
9325808f684SSatish Balay    BSIZE = 5
9335808f684SSatish Balayclass TestMatMPIAIJCRL_B_G45_B5(TestMatMPIAIJCRL_B_G45):
9345808f684SSatish Balay    BSIZE = 5
9355808f684SSatish Balayclass TestMatMPIAIJCRL_B_G89_B5(TestMatMPIAIJCRL_B_G89):
9365808f684SSatish Balay    BSIZE = 5
9375808f684SSatish Balay
938*fc989267SStefano Zampini# -- MATIS --
939*fc989267SStefano Zampini
940*fc989267SStefano Zampiniclass TestMatIS(BaseTestMatAIJ):
941*fc989267SStefano Zampini    COMM = PETSc.COMM_WORLD
942*fc989267SStefano Zampini    TYPE = PETSc.Mat.Type.IS
943*fc989267SStefano Zampiniclass TestMatIS_G23(TestMatIS):
944*fc989267SStefano Zampini    GRID  = 2, 3
945*fc989267SStefano Zampiniclass TestMatIS_G45(TestMatIS):
946*fc989267SStefano Zampini    GRID  = 4, 5
947*fc989267SStefano Zampiniclass TestMatIS_G89(TestMatIS):
948*fc989267SStefano Zampini    GRID  = 8, 9
949*fc989267SStefano Zampini
9505808f684SSatish Balay# -----
9515808f684SSatish Balay
9525808f684SSatish Balay
9535808f684SSatish Balay
9545808f684SSatish Balayif __name__ == '__main__':
9555808f684SSatish Balay    unittest.main()
956