120cf1dd8SToby Isaac /* Basis Jet Tabulation 220cf1dd8SToby Isaac 320cf1dd8SToby Isaac We would like to tabulate the nodal basis functions and derivatives at a set of points, usually quadrature points. We 420cf1dd8SToby Isaac follow here the derviation in http://www.math.ttu.edu/~kirby/papers/fiat-toms-2004.pdf. The nodal basis $\psi_i$ can 520cf1dd8SToby Isaac be expressed in terms of a prime basis $\phi_i$ which can be stably evaluated. In PETSc, we will use the Legendre basis 620cf1dd8SToby Isaac as a prime basis. 720cf1dd8SToby Isaac 820cf1dd8SToby Isaac \psi_i = \sum_k \alpha_{ki} \phi_k 920cf1dd8SToby Isaac 1020cf1dd8SToby Isaac Our nodal basis is defined in terms of the dual basis $n_j$ 1120cf1dd8SToby Isaac 1220cf1dd8SToby Isaac n_j \cdot \psi_i = \delta_{ji} 1320cf1dd8SToby Isaac 1420cf1dd8SToby Isaac and we may act on the first equation to obtain 1520cf1dd8SToby Isaac 1620cf1dd8SToby Isaac n_j \cdot \psi_i = \sum_k \alpha_{ki} n_j \cdot \phi_k 1720cf1dd8SToby Isaac \delta_{ji} = \sum_k \alpha_{ki} V_{jk} 1820cf1dd8SToby Isaac I = V \alpha 1920cf1dd8SToby Isaac 2020cf1dd8SToby Isaac so the coefficients of the nodal basis in the prime basis are 2120cf1dd8SToby Isaac 2220cf1dd8SToby Isaac \alpha = V^{-1} 2320cf1dd8SToby Isaac 2420cf1dd8SToby Isaac We will define the dual basis vectors $n_j$ using a quadrature rule. 2520cf1dd8SToby Isaac 2620cf1dd8SToby Isaac Right now, we will just use the polynomial spaces P^k. I know some elements use the space of symmetric polynomials 2720cf1dd8SToby Isaac (I think Nedelec), but we will neglect this for now. Constraints in the space, e.g. Arnold-Winther elements, can 2820cf1dd8SToby Isaac be implemented exactly as in FIAT using functionals $L_j$. 2920cf1dd8SToby Isaac 3020cf1dd8SToby Isaac I will have to count the degrees correctly for the Legendre product when we are on simplices. 3120cf1dd8SToby Isaac 3220cf1dd8SToby Isaac We will have three objects: 3320cf1dd8SToby Isaac - Space, P: this just need point evaluation I think 3420cf1dd8SToby Isaac - Dual Space, P'+K: This looks like a set of functionals that can act on members of P, each n is defined by a Q 3520cf1dd8SToby Isaac - FEM: This keeps {P, P', Q} 3620cf1dd8SToby Isaac */ 3720cf1dd8SToby Isaac #include <petsc/private/petscfeimpl.h> /*I "petscfe.h" I*/ 3820cf1dd8SToby Isaac #include <petscdmplex.h> 3920cf1dd8SToby Isaac 4020cf1dd8SToby Isaac PetscBool FEcite = PETSC_FALSE; 4120cf1dd8SToby Isaac const char FECitation[] = "@article{kirby2004,\n" 4220cf1dd8SToby Isaac " title = {Algorithm 839: FIAT, a New Paradigm for Computing Finite Element Basis Functions},\n" 4320cf1dd8SToby Isaac " journal = {ACM Transactions on Mathematical Software},\n" 4420cf1dd8SToby Isaac " author = {Robert C. Kirby},\n" 4520cf1dd8SToby Isaac " volume = {30},\n" 4620cf1dd8SToby Isaac " number = {4},\n" 4720cf1dd8SToby Isaac " pages = {502--516},\n" 4820cf1dd8SToby Isaac " doi = {10.1145/1039813.1039820},\n" 4920cf1dd8SToby Isaac " year = {2004}\n}\n"; 5020cf1dd8SToby Isaac 5120cf1dd8SToby Isaac PetscClassId PETSCFE_CLASSID = 0; 5220cf1dd8SToby Isaac 53ead873ccSMatthew G. Knepley PetscLogEvent PETSCFE_SetUp; 54ead873ccSMatthew G. Knepley 5520cf1dd8SToby Isaac PetscFunctionList PetscFEList = NULL; 5620cf1dd8SToby Isaac PetscBool PetscFERegisterAllCalled = PETSC_FALSE; 5720cf1dd8SToby Isaac 5820cf1dd8SToby Isaac /*@C 59dce8aebaSBarry Smith PetscFERegister - Adds a new `PetscFEType` 6020cf1dd8SToby Isaac 6120cf1dd8SToby Isaac Not Collective 6220cf1dd8SToby Isaac 6320cf1dd8SToby Isaac Input Parameters: 6420cf1dd8SToby Isaac + name - The name of a new user-defined creation routine 6520cf1dd8SToby Isaac - create_func - The creation routine itself 6620cf1dd8SToby Isaac 6720cf1dd8SToby Isaac Sample usage: 6820cf1dd8SToby Isaac .vb 6920cf1dd8SToby Isaac PetscFERegister("my_fe", MyPetscFECreate); 7020cf1dd8SToby Isaac .ve 7120cf1dd8SToby Isaac 7220cf1dd8SToby Isaac Then, your PetscFE type can be chosen with the procedural interface via 7320cf1dd8SToby Isaac .vb 7420cf1dd8SToby Isaac PetscFECreate(MPI_Comm, PetscFE *); 7520cf1dd8SToby Isaac PetscFESetType(PetscFE, "my_fe"); 7620cf1dd8SToby Isaac .ve 7720cf1dd8SToby Isaac or at runtime via the option 7820cf1dd8SToby Isaac .vb 7920cf1dd8SToby Isaac -petscfe_type my_fe 8020cf1dd8SToby Isaac .ve 8120cf1dd8SToby Isaac 8220cf1dd8SToby Isaac Level: advanced 8320cf1dd8SToby Isaac 84dce8aebaSBarry Smith Note: 85dce8aebaSBarry Smith `PetscFERegister()` may be called multiple times to add several user-defined `PetscFE`s 8620cf1dd8SToby Isaac 87dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEType`, `PetscFERegisterAll()`, `PetscFERegisterDestroy()` 8820cf1dd8SToby Isaac @*/ 89d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFERegister(const char sname[], PetscErrorCode (*function)(PetscFE)) 90d71ae5a4SJacob Faibussowitsch { 9120cf1dd8SToby Isaac PetscFunctionBegin; 929566063dSJacob Faibussowitsch PetscCall(PetscFunctionListAdd(&PetscFEList, sname, function)); 933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9420cf1dd8SToby Isaac } 9520cf1dd8SToby Isaac 9620cf1dd8SToby Isaac /*@C 97dce8aebaSBarry Smith PetscFESetType - Builds a particular `PetscFE` 9820cf1dd8SToby Isaac 99*20f4b53cSBarry Smith Collective 10020cf1dd8SToby Isaac 10120cf1dd8SToby Isaac Input Parameters: 102dce8aebaSBarry Smith + fem - The `PetscFE` object 10320cf1dd8SToby Isaac - name - The kind of FEM space 10420cf1dd8SToby Isaac 10520cf1dd8SToby Isaac Options Database Key: 106*20f4b53cSBarry Smith . -petscfe_type <type> - Sets the `PetscFE` type; use -help for a list of available types 10720cf1dd8SToby Isaac 10820cf1dd8SToby Isaac Level: intermediate 10920cf1dd8SToby Isaac 110dce8aebaSBarry Smith .seealso: `PetscFEType`, `PetscFE`, `PetscFEGetType()`, `PetscFECreate()` 11120cf1dd8SToby Isaac @*/ 112d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetType(PetscFE fem, PetscFEType name) 113d71ae5a4SJacob Faibussowitsch { 11420cf1dd8SToby Isaac PetscErrorCode (*r)(PetscFE); 11520cf1dd8SToby Isaac PetscBool match; 11620cf1dd8SToby Isaac 11720cf1dd8SToby Isaac PetscFunctionBegin; 11820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 1199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)fem, name, &match)); 1203ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS); 12120cf1dd8SToby Isaac 1229566063dSJacob Faibussowitsch if (!PetscFERegisterAllCalled) PetscCall(PetscFERegisterAll()); 1239566063dSJacob Faibussowitsch PetscCall(PetscFunctionListFind(PetscFEList, name, &r)); 12428b400f6SJacob Faibussowitsch PetscCheck(r, PetscObjectComm((PetscObject)fem), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown PetscFE type: %s", name); 12520cf1dd8SToby Isaac 126dbbe0bcdSBarry Smith PetscTryTypeMethod(fem, destroy); 12720cf1dd8SToby Isaac fem->ops->destroy = NULL; 128dbbe0bcdSBarry Smith 1299566063dSJacob Faibussowitsch PetscCall((*r)(fem)); 1309566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)fem, name)); 1313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13220cf1dd8SToby Isaac } 13320cf1dd8SToby Isaac 13420cf1dd8SToby Isaac /*@C 135dce8aebaSBarry Smith PetscFEGetType - Gets the `PetscFEType` (as a string) from the `PetscFE` object. 13620cf1dd8SToby Isaac 13720cf1dd8SToby Isaac Not Collective 13820cf1dd8SToby Isaac 13920cf1dd8SToby Isaac Input Parameter: 140dce8aebaSBarry Smith . fem - The `PetscFE` 14120cf1dd8SToby Isaac 14220cf1dd8SToby Isaac Output Parameter: 143dce8aebaSBarry Smith . name - The `PetscFEType` name 14420cf1dd8SToby Isaac 14520cf1dd8SToby Isaac Level: intermediate 14620cf1dd8SToby Isaac 147dce8aebaSBarry Smith .seealso: `PetscFEType`, `PetscFE`, `PetscFESetType()`, `PetscFECreate()` 14820cf1dd8SToby Isaac @*/ 149d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetType(PetscFE fem, PetscFEType *name) 150d71ae5a4SJacob Faibussowitsch { 15120cf1dd8SToby Isaac PetscFunctionBegin; 15220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 15320cf1dd8SToby Isaac PetscValidPointer(name, 2); 15448a46eb9SPierre Jolivet if (!PetscFERegisterAllCalled) PetscCall(PetscFERegisterAll()); 15520cf1dd8SToby Isaac *name = ((PetscObject)fem)->type_name; 1563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15720cf1dd8SToby Isaac } 15820cf1dd8SToby Isaac 15920cf1dd8SToby Isaac /*@C 160dce8aebaSBarry Smith PetscFEViewFromOptions - View from a `PetscFE` based on values in the options database 161fe2efc57SMark 162*20f4b53cSBarry Smith Collective 163fe2efc57SMark 164fe2efc57SMark Input Parameters: 165dce8aebaSBarry Smith + A - the `PetscFE` object 166dce8aebaSBarry Smith . obj - Optional object that provides the options prefix 167dce8aebaSBarry Smith - name - command line option name 168fe2efc57SMark 169fe2efc57SMark Level: intermediate 170dce8aebaSBarry Smith 171dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEView()`, `PetscObjectViewFromOptions()`, `PetscFECreate()` 172fe2efc57SMark @*/ 173d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEViewFromOptions(PetscFE A, PetscObject obj, const char name[]) 174d71ae5a4SJacob Faibussowitsch { 175fe2efc57SMark PetscFunctionBegin; 176fe2efc57SMark PetscValidHeaderSpecific(A, PETSCFE_CLASSID, 1); 1779566063dSJacob Faibussowitsch PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name)); 1783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 179fe2efc57SMark } 180fe2efc57SMark 181fe2efc57SMark /*@C 182dce8aebaSBarry Smith PetscFEView - Views a `PetscFE` 18320cf1dd8SToby Isaac 184*20f4b53cSBarry Smith Collective 18520cf1dd8SToby Isaac 186d8d19677SJose E. Roman Input Parameters: 187dce8aebaSBarry Smith + fem - the `PetscFE` object to view 188d9bac1caSLisandro Dalcin - viewer - the viewer 18920cf1dd8SToby Isaac 1902b99622eSMatthew G. Knepley Level: beginner 19120cf1dd8SToby Isaac 192dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscViewer`, `PetscFEDestroy()`, `PetscFEViewFromOptions()` 19320cf1dd8SToby Isaac @*/ 194d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEView(PetscFE fem, PetscViewer viewer) 195d71ae5a4SJacob Faibussowitsch { 196d9bac1caSLisandro Dalcin PetscBool iascii; 19720cf1dd8SToby Isaac 19820cf1dd8SToby Isaac PetscFunctionBegin; 19920cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 200d9bac1caSLisandro Dalcin if (viewer) PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2019566063dSJacob Faibussowitsch if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)fem), &viewer)); 2029566063dSJacob Faibussowitsch PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)fem, viewer)); 2039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 204dbbe0bcdSBarry Smith PetscTryTypeMethod(fem, view, viewer); 2053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20620cf1dd8SToby Isaac } 20720cf1dd8SToby Isaac 20820cf1dd8SToby Isaac /*@ 209dce8aebaSBarry Smith PetscFESetFromOptions - sets parameters in a `PetscFE` from the options database 21020cf1dd8SToby Isaac 211*20f4b53cSBarry Smith Collective 21220cf1dd8SToby Isaac 21320cf1dd8SToby Isaac Input Parameter: 214dce8aebaSBarry Smith . fem - the `PetscFE` object to set options for 21520cf1dd8SToby Isaac 216dce8aebaSBarry Smith Options Database Keys: 217a2b725a8SWilliam Gropp + -petscfe_num_blocks - the number of cell blocks to integrate concurrently 218a2b725a8SWilliam Gropp - -petscfe_num_batches - the number of cell batches to integrate serially 21920cf1dd8SToby Isaac 2202b99622eSMatthew G. Knepley Level: intermediate 22120cf1dd8SToby Isaac 222dce8aebaSBarry Smith .seealso: `PetscFEV`, `PetscFEView()` 22320cf1dd8SToby Isaac @*/ 224d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetFromOptions(PetscFE fem) 225d71ae5a4SJacob Faibussowitsch { 22620cf1dd8SToby Isaac const char *defaultType; 22720cf1dd8SToby Isaac char name[256]; 22820cf1dd8SToby Isaac PetscBool flg; 22920cf1dd8SToby Isaac 23020cf1dd8SToby Isaac PetscFunctionBegin; 23120cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 23220cf1dd8SToby Isaac if (!((PetscObject)fem)->type_name) { 23320cf1dd8SToby Isaac defaultType = PETSCFEBASIC; 23420cf1dd8SToby Isaac } else { 23520cf1dd8SToby Isaac defaultType = ((PetscObject)fem)->type_name; 23620cf1dd8SToby Isaac } 2379566063dSJacob Faibussowitsch if (!PetscFERegisterAllCalled) PetscCall(PetscFERegisterAll()); 23820cf1dd8SToby Isaac 239d0609cedSBarry Smith PetscObjectOptionsBegin((PetscObject)fem); 2409566063dSJacob Faibussowitsch PetscCall(PetscOptionsFList("-petscfe_type", "Finite element space", "PetscFESetType", PetscFEList, defaultType, name, 256, &flg)); 24120cf1dd8SToby Isaac if (flg) { 2429566063dSJacob Faibussowitsch PetscCall(PetscFESetType(fem, name)); 24320cf1dd8SToby Isaac } else if (!((PetscObject)fem)->type_name) { 2449566063dSJacob Faibussowitsch PetscCall(PetscFESetType(fem, defaultType)); 24520cf1dd8SToby Isaac } 2469566063dSJacob Faibussowitsch PetscCall(PetscOptionsBoundedInt("-petscfe_num_blocks", "The number of cell blocks to integrate concurrently", "PetscSpaceSetTileSizes", fem->numBlocks, &fem->numBlocks, NULL, 1)); 2479566063dSJacob Faibussowitsch PetscCall(PetscOptionsBoundedInt("-petscfe_num_batches", "The number of cell batches to integrate serially", "PetscSpaceSetTileSizes", fem->numBatches, &fem->numBatches, NULL, 1)); 248dbbe0bcdSBarry Smith PetscTryTypeMethod(fem, setfromoptions, PetscOptionsObject); 24920cf1dd8SToby Isaac /* process any options handlers added with PetscObjectAddOptionsHandler() */ 250dbbe0bcdSBarry Smith PetscCall(PetscObjectProcessOptionsHandlers((PetscObject)fem, PetscOptionsObject)); 251d0609cedSBarry Smith PetscOptionsEnd(); 2529566063dSJacob Faibussowitsch PetscCall(PetscFEViewFromOptions(fem, NULL, "-petscfe_view")); 2533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 25420cf1dd8SToby Isaac } 25520cf1dd8SToby Isaac 25620cf1dd8SToby Isaac /*@C 257dce8aebaSBarry Smith PetscFESetUp - Construct data structures for the `PetscFE` after the `PetscFEType` has been set 25820cf1dd8SToby Isaac 259*20f4b53cSBarry Smith Collective 26020cf1dd8SToby Isaac 26120cf1dd8SToby Isaac Input Parameter: 262dce8aebaSBarry Smith . fem - the `PetscFE` object to setup 26320cf1dd8SToby Isaac 2642b99622eSMatthew G. Knepley Level: intermediate 26520cf1dd8SToby Isaac 266dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEView()`, `PetscFEDestroy()` 26720cf1dd8SToby Isaac @*/ 268d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetUp(PetscFE fem) 269d71ae5a4SJacob Faibussowitsch { 27020cf1dd8SToby Isaac PetscFunctionBegin; 27120cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 2723ba16761SJacob Faibussowitsch if (fem->setupcalled) PetscFunctionReturn(PETSC_SUCCESS); 2739566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(PETSCFE_SetUp, fem, 0, 0, 0)); 27420cf1dd8SToby Isaac fem->setupcalled = PETSC_TRUE; 275dbbe0bcdSBarry Smith PetscTryTypeMethod(fem, setup); 2769566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(PETSCFE_SetUp, fem, 0, 0, 0)); 2773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 27820cf1dd8SToby Isaac } 27920cf1dd8SToby Isaac 28020cf1dd8SToby Isaac /*@ 281dce8aebaSBarry Smith PetscFEDestroy - Destroys a `PetscFE` object 28220cf1dd8SToby Isaac 283*20f4b53cSBarry Smith Collective 28420cf1dd8SToby Isaac 28520cf1dd8SToby Isaac Input Parameter: 286dce8aebaSBarry Smith . fem - the `PetscFE` object to destroy 28720cf1dd8SToby Isaac 2882b99622eSMatthew G. Knepley Level: beginner 28920cf1dd8SToby Isaac 290dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEView()` 29120cf1dd8SToby Isaac @*/ 292d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEDestroy(PetscFE *fem) 293d71ae5a4SJacob Faibussowitsch { 29420cf1dd8SToby Isaac PetscFunctionBegin; 2953ba16761SJacob Faibussowitsch if (!*fem) PetscFunctionReturn(PETSC_SUCCESS); 29620cf1dd8SToby Isaac PetscValidHeaderSpecific((*fem), PETSCFE_CLASSID, 1); 29720cf1dd8SToby Isaac 2989371c9d4SSatish Balay if (--((PetscObject)(*fem))->refct > 0) { 2999371c9d4SSatish Balay *fem = NULL; 3003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3019371c9d4SSatish Balay } 30220cf1dd8SToby Isaac ((PetscObject)(*fem))->refct = 0; 30320cf1dd8SToby Isaac 30420cf1dd8SToby Isaac if ((*fem)->subspaces) { 30520cf1dd8SToby Isaac PetscInt dim, d; 30620cf1dd8SToby Isaac 3079566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDimension((*fem)->dualSpace, &dim)); 3089566063dSJacob Faibussowitsch for (d = 0; d < dim; ++d) PetscCall(PetscFEDestroy(&(*fem)->subspaces[d])); 30920cf1dd8SToby Isaac } 3109566063dSJacob Faibussowitsch PetscCall(PetscFree((*fem)->subspaces)); 3119566063dSJacob Faibussowitsch PetscCall(PetscFree((*fem)->invV)); 3129566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&(*fem)->T)); 3139566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&(*fem)->Tf)); 3149566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&(*fem)->Tc)); 3159566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&(*fem)->basisSpace)); 3169566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceDestroy(&(*fem)->dualSpace)); 3179566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&(*fem)->quadrature)); 3189566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&(*fem)->faceQuadrature)); 319f918ec44SMatthew G. Knepley #ifdef PETSC_HAVE_LIBCEED 3209566063dSJacob Faibussowitsch PetscCallCEED(CeedBasisDestroy(&(*fem)->ceedBasis)); 3219566063dSJacob Faibussowitsch PetscCallCEED(CeedDestroy(&(*fem)->ceed)); 322f918ec44SMatthew G. Knepley #endif 32320cf1dd8SToby Isaac 324dbbe0bcdSBarry Smith PetscTryTypeMethod((*fem), destroy); 3259566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(fem)); 3263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 32720cf1dd8SToby Isaac } 32820cf1dd8SToby Isaac 32920cf1dd8SToby Isaac /*@ 330dce8aebaSBarry Smith PetscFECreate - Creates an empty `PetscFE` object. The type can then be set with `PetscFESetType()`. 33120cf1dd8SToby Isaac 332d083f849SBarry Smith Collective 33320cf1dd8SToby Isaac 33420cf1dd8SToby Isaac Input Parameter: 335dce8aebaSBarry Smith . comm - The communicator for the `PetscFE` object 33620cf1dd8SToby Isaac 33720cf1dd8SToby Isaac Output Parameter: 338dce8aebaSBarry Smith . fem - The `PetscFE` object 33920cf1dd8SToby Isaac 34020cf1dd8SToby Isaac Level: beginner 34120cf1dd8SToby Isaac 342a01caf64Smarkadams4 .seealso: `PetscFE`, `PetscFEType`, `PetscFESetType()`, `PetscFECreateDefault()`, `PETSCFEGALERKIN` 34320cf1dd8SToby Isaac @*/ 344d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreate(MPI_Comm comm, PetscFE *fem) 345d71ae5a4SJacob Faibussowitsch { 34620cf1dd8SToby Isaac PetscFE f; 34720cf1dd8SToby Isaac 34820cf1dd8SToby Isaac PetscFunctionBegin; 34920cf1dd8SToby Isaac PetscValidPointer(fem, 2); 3509566063dSJacob Faibussowitsch PetscCall(PetscCitationsRegister(FECitation, &FEcite)); 35120cf1dd8SToby Isaac *fem = NULL; 3529566063dSJacob Faibussowitsch PetscCall(PetscFEInitializePackage()); 35320cf1dd8SToby Isaac 3549566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(f, PETSCFE_CLASSID, "PetscFE", "Finite Element", "PetscFE", comm, PetscFEDestroy, PetscFEView)); 35520cf1dd8SToby Isaac 35620cf1dd8SToby Isaac f->basisSpace = NULL; 35720cf1dd8SToby Isaac f->dualSpace = NULL; 35820cf1dd8SToby Isaac f->numComponents = 1; 35920cf1dd8SToby Isaac f->subspaces = NULL; 36020cf1dd8SToby Isaac f->invV = NULL; 361ef0bb6c7SMatthew G. Knepley f->T = NULL; 362ef0bb6c7SMatthew G. Knepley f->Tf = NULL; 363ef0bb6c7SMatthew G. Knepley f->Tc = NULL; 3649566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(&f->quadrature, 1)); 3659566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(&f->faceQuadrature, 1)); 36620cf1dd8SToby Isaac f->blockSize = 0; 36720cf1dd8SToby Isaac f->numBlocks = 1; 36820cf1dd8SToby Isaac f->batchSize = 0; 36920cf1dd8SToby Isaac f->numBatches = 1; 37020cf1dd8SToby Isaac 37120cf1dd8SToby Isaac *fem = f; 3723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 37320cf1dd8SToby Isaac } 37420cf1dd8SToby Isaac 37520cf1dd8SToby Isaac /*@ 37620cf1dd8SToby Isaac PetscFEGetSpatialDimension - Returns the spatial dimension of the element 37720cf1dd8SToby Isaac 378*20f4b53cSBarry Smith Not Collective 37920cf1dd8SToby Isaac 38020cf1dd8SToby Isaac Input Parameter: 381dce8aebaSBarry Smith . fem - The `PetscFE` object 38220cf1dd8SToby Isaac 38320cf1dd8SToby Isaac Output Parameter: 38420cf1dd8SToby Isaac . dim - The spatial dimension 38520cf1dd8SToby Isaac 38620cf1dd8SToby Isaac Level: intermediate 38720cf1dd8SToby Isaac 388dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()` 38920cf1dd8SToby Isaac @*/ 390d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetSpatialDimension(PetscFE fem, PetscInt *dim) 391d71ae5a4SJacob Faibussowitsch { 39220cf1dd8SToby Isaac DM dm; 39320cf1dd8SToby Isaac 39420cf1dd8SToby Isaac PetscFunctionBegin; 39520cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 396dadcf809SJacob Faibussowitsch PetscValidIntPointer(dim, 2); 3979566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(fem->dualSpace, &dm)); 3989566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, dim)); 3993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 40020cf1dd8SToby Isaac } 40120cf1dd8SToby Isaac 40220cf1dd8SToby Isaac /*@ 403dce8aebaSBarry Smith PetscFESetNumComponents - Sets the number of field components in the element 40420cf1dd8SToby Isaac 405*20f4b53cSBarry Smith Not Collective 40620cf1dd8SToby Isaac 40720cf1dd8SToby Isaac Input Parameters: 408dce8aebaSBarry Smith + fem - The `PetscFE` object 40920cf1dd8SToby Isaac - comp - The number of field components 41020cf1dd8SToby Isaac 41120cf1dd8SToby Isaac Level: intermediate 41220cf1dd8SToby Isaac 413dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()`, `PetscFEGetSpatialDimension()`, `PetscFEGetNumComponents()` 41420cf1dd8SToby Isaac @*/ 415d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetNumComponents(PetscFE fem, PetscInt comp) 416d71ae5a4SJacob Faibussowitsch { 41720cf1dd8SToby Isaac PetscFunctionBegin; 41820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 41920cf1dd8SToby Isaac fem->numComponents = comp; 4203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 42120cf1dd8SToby Isaac } 42220cf1dd8SToby Isaac 42320cf1dd8SToby Isaac /*@ 42420cf1dd8SToby Isaac PetscFEGetNumComponents - Returns the number of components in the element 42520cf1dd8SToby Isaac 426*20f4b53cSBarry Smith Not Collective 42720cf1dd8SToby Isaac 42820cf1dd8SToby Isaac Input Parameter: 429dce8aebaSBarry Smith . fem - The `PetscFE` object 43020cf1dd8SToby Isaac 43120cf1dd8SToby Isaac Output Parameter: 43220cf1dd8SToby Isaac . comp - The number of field components 43320cf1dd8SToby Isaac 43420cf1dd8SToby Isaac Level: intermediate 43520cf1dd8SToby Isaac 436dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()`, `PetscFEGetSpatialDimension()`, `PetscFEGetNumComponents()` 43720cf1dd8SToby Isaac @*/ 438d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetNumComponents(PetscFE fem, PetscInt *comp) 439d71ae5a4SJacob Faibussowitsch { 44020cf1dd8SToby Isaac PetscFunctionBegin; 44120cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 442dadcf809SJacob Faibussowitsch PetscValidIntPointer(comp, 2); 44320cf1dd8SToby Isaac *comp = fem->numComponents; 4443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44520cf1dd8SToby Isaac } 44620cf1dd8SToby Isaac 44720cf1dd8SToby Isaac /*@ 44820cf1dd8SToby Isaac PetscFESetTileSizes - Sets the tile sizes for evaluation 44920cf1dd8SToby Isaac 450*20f4b53cSBarry Smith Not Collective 45120cf1dd8SToby Isaac 45220cf1dd8SToby Isaac Input Parameters: 453dce8aebaSBarry Smith + fem - The `PetscFE` object 45420cf1dd8SToby Isaac . blockSize - The number of elements in a block 45520cf1dd8SToby Isaac . numBlocks - The number of blocks in a batch 45620cf1dd8SToby Isaac . batchSize - The number of elements in a batch 45720cf1dd8SToby Isaac - numBatches - The number of batches in a chunk 45820cf1dd8SToby Isaac 45920cf1dd8SToby Isaac Level: intermediate 46020cf1dd8SToby Isaac 461dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()`, `PetscFEGetTileSizes()` 46220cf1dd8SToby Isaac @*/ 463d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetTileSizes(PetscFE fem, PetscInt blockSize, PetscInt numBlocks, PetscInt batchSize, PetscInt numBatches) 464d71ae5a4SJacob Faibussowitsch { 46520cf1dd8SToby Isaac PetscFunctionBegin; 46620cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 46720cf1dd8SToby Isaac fem->blockSize = blockSize; 46820cf1dd8SToby Isaac fem->numBlocks = numBlocks; 46920cf1dd8SToby Isaac fem->batchSize = batchSize; 47020cf1dd8SToby Isaac fem->numBatches = numBatches; 4713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 47220cf1dd8SToby Isaac } 47320cf1dd8SToby Isaac 47420cf1dd8SToby Isaac /*@ 47520cf1dd8SToby Isaac PetscFEGetTileSizes - Returns the tile sizes for evaluation 47620cf1dd8SToby Isaac 477*20f4b53cSBarry Smith Not Collective 47820cf1dd8SToby Isaac 47920cf1dd8SToby Isaac Input Parameter: 480dce8aebaSBarry Smith . fem - The `PetscFE` object 48120cf1dd8SToby Isaac 48220cf1dd8SToby Isaac Output Parameters: 48320cf1dd8SToby Isaac + blockSize - The number of elements in a block 48420cf1dd8SToby Isaac . numBlocks - The number of blocks in a batch 48520cf1dd8SToby Isaac . batchSize - The number of elements in a batch 48620cf1dd8SToby Isaac - numBatches - The number of batches in a chunk 48720cf1dd8SToby Isaac 48820cf1dd8SToby Isaac Level: intermediate 48920cf1dd8SToby Isaac 490dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()`, `PetscFESetTileSizes()` 49120cf1dd8SToby Isaac @*/ 492d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetTileSizes(PetscFE fem, PetscInt *blockSize, PetscInt *numBlocks, PetscInt *batchSize, PetscInt *numBatches) 493d71ae5a4SJacob Faibussowitsch { 49420cf1dd8SToby Isaac PetscFunctionBegin; 49520cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 496dadcf809SJacob Faibussowitsch if (blockSize) PetscValidIntPointer(blockSize, 2); 497dadcf809SJacob Faibussowitsch if (numBlocks) PetscValidIntPointer(numBlocks, 3); 498dadcf809SJacob Faibussowitsch if (batchSize) PetscValidIntPointer(batchSize, 4); 499dadcf809SJacob Faibussowitsch if (numBatches) PetscValidIntPointer(numBatches, 5); 50020cf1dd8SToby Isaac if (blockSize) *blockSize = fem->blockSize; 50120cf1dd8SToby Isaac if (numBlocks) *numBlocks = fem->numBlocks; 50220cf1dd8SToby Isaac if (batchSize) *batchSize = fem->batchSize; 50320cf1dd8SToby Isaac if (numBatches) *numBatches = fem->numBatches; 5043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 50520cf1dd8SToby Isaac } 50620cf1dd8SToby Isaac 50720cf1dd8SToby Isaac /*@ 508dce8aebaSBarry Smith PetscFEGetBasisSpace - Returns the `PetscSpace` used for the approximation of the solution for the `PetscFE` 50920cf1dd8SToby Isaac 510*20f4b53cSBarry Smith Not Collective 51120cf1dd8SToby Isaac 51220cf1dd8SToby Isaac Input Parameter: 513dce8aebaSBarry Smith . fem - The `PetscFE` object 51420cf1dd8SToby Isaac 51520cf1dd8SToby Isaac Output Parameter: 516dce8aebaSBarry Smith . sp - The `PetscSpace` object 51720cf1dd8SToby Isaac 51820cf1dd8SToby Isaac Level: intermediate 51920cf1dd8SToby Isaac 520dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscFECreate()` 52120cf1dd8SToby Isaac @*/ 522d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetBasisSpace(PetscFE fem, PetscSpace *sp) 523d71ae5a4SJacob Faibussowitsch { 52420cf1dd8SToby Isaac PetscFunctionBegin; 52520cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 52620cf1dd8SToby Isaac PetscValidPointer(sp, 2); 52720cf1dd8SToby Isaac *sp = fem->basisSpace; 5283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 52920cf1dd8SToby Isaac } 53020cf1dd8SToby Isaac 53120cf1dd8SToby Isaac /*@ 532dce8aebaSBarry Smith PetscFESetBasisSpace - Sets the `PetscSpace` used for the approximation of the solution 53320cf1dd8SToby Isaac 534*20f4b53cSBarry Smith Not Collective 53520cf1dd8SToby Isaac 53620cf1dd8SToby Isaac Input Parameters: 537dce8aebaSBarry Smith + fem - The `PetscFE` object 538dce8aebaSBarry Smith - sp - The `PetscSpace` object 53920cf1dd8SToby Isaac 54020cf1dd8SToby Isaac Level: intermediate 54120cf1dd8SToby Isaac 542dce8aebaSBarry Smith Developer Note: 543dce8aebaSBarry Smith There is `PetscFESetBasisSpace()` but the `PetscFESetDualSpace()`, likely the Basis is unneeded in the function name 544dce8aebaSBarry Smith 545dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscFECreate()`, `PetscFESetDualSpace()` 54620cf1dd8SToby Isaac @*/ 547d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetBasisSpace(PetscFE fem, PetscSpace sp) 548d71ae5a4SJacob Faibussowitsch { 54920cf1dd8SToby Isaac PetscFunctionBegin; 55020cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 55120cf1dd8SToby Isaac PetscValidHeaderSpecific(sp, PETSCSPACE_CLASSID, 2); 5529566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&fem->basisSpace)); 55320cf1dd8SToby Isaac fem->basisSpace = sp; 5549566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)fem->basisSpace)); 5553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 55620cf1dd8SToby Isaac } 55720cf1dd8SToby Isaac 55820cf1dd8SToby Isaac /*@ 559dce8aebaSBarry Smith PetscFEGetDualSpace - Returns the `PetscDualSpace` used to define the inner product for a `PetscFE` 56020cf1dd8SToby Isaac 561*20f4b53cSBarry Smith Not Collective 56220cf1dd8SToby Isaac 56320cf1dd8SToby Isaac Input Parameter: 564dce8aebaSBarry Smith . fem - The `PetscFE` object 56520cf1dd8SToby Isaac 56620cf1dd8SToby Isaac Output Parameter: 567dce8aebaSBarry Smith . sp - The `PetscDualSpace` object 56820cf1dd8SToby Isaac 56920cf1dd8SToby Isaac Level: intermediate 57020cf1dd8SToby Isaac 571dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscFECreate()` 57220cf1dd8SToby Isaac @*/ 573d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetDualSpace(PetscFE fem, PetscDualSpace *sp) 574d71ae5a4SJacob Faibussowitsch { 57520cf1dd8SToby Isaac PetscFunctionBegin; 57620cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 57720cf1dd8SToby Isaac PetscValidPointer(sp, 2); 57820cf1dd8SToby Isaac *sp = fem->dualSpace; 5793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 58020cf1dd8SToby Isaac } 58120cf1dd8SToby Isaac 58220cf1dd8SToby Isaac /*@ 583dce8aebaSBarry Smith PetscFESetDualSpace - Sets the `PetscDualSpace` used to define the inner product 58420cf1dd8SToby Isaac 585*20f4b53cSBarry Smith Not Collective 58620cf1dd8SToby Isaac 58720cf1dd8SToby Isaac Input Parameters: 588dce8aebaSBarry Smith + fem - The `PetscFE` object 589dce8aebaSBarry Smith - sp - The `PetscDualSpace` object 59020cf1dd8SToby Isaac 59120cf1dd8SToby Isaac Level: intermediate 59220cf1dd8SToby Isaac 593dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscFECreate()`, `PetscFESetBasisSpace()` 59420cf1dd8SToby Isaac @*/ 595d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetDualSpace(PetscFE fem, PetscDualSpace sp) 596d71ae5a4SJacob Faibussowitsch { 59720cf1dd8SToby Isaac PetscFunctionBegin; 59820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 59920cf1dd8SToby Isaac PetscValidHeaderSpecific(sp, PETSCDUALSPACE_CLASSID, 2); 6009566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceDestroy(&fem->dualSpace)); 60120cf1dd8SToby Isaac fem->dualSpace = sp; 6029566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)fem->dualSpace)); 6033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 60420cf1dd8SToby Isaac } 60520cf1dd8SToby Isaac 60620cf1dd8SToby Isaac /*@ 607dce8aebaSBarry Smith PetscFEGetQuadrature - Returns the `PetscQuadrature` used to calculate inner products 60820cf1dd8SToby Isaac 609*20f4b53cSBarry Smith Not Collective 61020cf1dd8SToby Isaac 61120cf1dd8SToby Isaac Input Parameter: 612dce8aebaSBarry Smith . fem - The `PetscFE` object 61320cf1dd8SToby Isaac 61420cf1dd8SToby Isaac Output Parameter: 615dce8aebaSBarry Smith . q - The `PetscQuadrature` object 61620cf1dd8SToby Isaac 61720cf1dd8SToby Isaac Level: intermediate 61820cf1dd8SToby Isaac 619dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, `PetscFECreate()` 62020cf1dd8SToby Isaac @*/ 621d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetQuadrature(PetscFE fem, PetscQuadrature *q) 622d71ae5a4SJacob Faibussowitsch { 62320cf1dd8SToby Isaac PetscFunctionBegin; 62420cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 62520cf1dd8SToby Isaac PetscValidPointer(q, 2); 62620cf1dd8SToby Isaac *q = fem->quadrature; 6273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 62820cf1dd8SToby Isaac } 62920cf1dd8SToby Isaac 63020cf1dd8SToby Isaac /*@ 631dce8aebaSBarry Smith PetscFESetQuadrature - Sets the `PetscQuadrature` used to calculate inner products 63220cf1dd8SToby Isaac 633*20f4b53cSBarry Smith Not Collective 63420cf1dd8SToby Isaac 63520cf1dd8SToby Isaac Input Parameters: 636dce8aebaSBarry Smith + fem - The `PetscFE` object 637dce8aebaSBarry Smith - q - The `PetscQuadrature` object 63820cf1dd8SToby Isaac 63920cf1dd8SToby Isaac Level: intermediate 64020cf1dd8SToby Isaac 641dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, `PetscFECreate()`, `PetscFEGetFaceQuadrature()` 64220cf1dd8SToby Isaac @*/ 643d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetQuadrature(PetscFE fem, PetscQuadrature q) 644d71ae5a4SJacob Faibussowitsch { 64520cf1dd8SToby Isaac PetscInt Nc, qNc; 64620cf1dd8SToby Isaac 64720cf1dd8SToby Isaac PetscFunctionBegin; 64820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 6493ba16761SJacob Faibussowitsch if (q == fem->quadrature) PetscFunctionReturn(PETSC_SUCCESS); 6509566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fem, &Nc)); 6519566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetNumComponents(q, &qNc)); 65263a3b9bcSJacob Faibussowitsch PetscCheck(!(qNc != 1) || !(Nc != qNc), PetscObjectComm((PetscObject)fem), PETSC_ERR_ARG_SIZ, "FE components %" PetscInt_FMT " != Quadrature components %" PetscInt_FMT " and non-scalar quadrature", Nc, qNc); 6539566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&fem->T)); 6549566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&fem->Tc)); 6559566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)q)); 6569566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&fem->quadrature)); 65720cf1dd8SToby Isaac fem->quadrature = q; 6583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 65920cf1dd8SToby Isaac } 66020cf1dd8SToby Isaac 66120cf1dd8SToby Isaac /*@ 662dce8aebaSBarry Smith PetscFEGetFaceQuadrature - Returns the `PetscQuadrature` used to calculate inner products on faces 66320cf1dd8SToby Isaac 664*20f4b53cSBarry Smith Not Collective 66520cf1dd8SToby Isaac 66620cf1dd8SToby Isaac Input Parameter: 667dce8aebaSBarry Smith . fem - The `PetscFE` object 66820cf1dd8SToby Isaac 66920cf1dd8SToby Isaac Output Parameter: 670dce8aebaSBarry Smith . q - The `PetscQuadrature` object 67120cf1dd8SToby Isaac 67220cf1dd8SToby Isaac Level: intermediate 67320cf1dd8SToby Isaac 674dce8aebaSBarry Smith Developer Note: 67535cb6cd3SPierre Jolivet There is a special face quadrature but not edge, likely this API would benefit from a refactorization 676dce8aebaSBarry Smith 677dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, `PetscFECreate()`, `PetscFESetQuadrature()`, `PetscFESetFaceQuadrature()` 67820cf1dd8SToby Isaac @*/ 679d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetFaceQuadrature(PetscFE fem, PetscQuadrature *q) 680d71ae5a4SJacob Faibussowitsch { 68120cf1dd8SToby Isaac PetscFunctionBegin; 68220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 68320cf1dd8SToby Isaac PetscValidPointer(q, 2); 68420cf1dd8SToby Isaac *q = fem->faceQuadrature; 6853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 68620cf1dd8SToby Isaac } 68720cf1dd8SToby Isaac 68820cf1dd8SToby Isaac /*@ 689dce8aebaSBarry Smith PetscFESetFaceQuadrature - Sets the `PetscQuadrature` used to calculate inner products on faces 69020cf1dd8SToby Isaac 691*20f4b53cSBarry Smith Not Collective 69220cf1dd8SToby Isaac 69320cf1dd8SToby Isaac Input Parameters: 694dce8aebaSBarry Smith + fem - The `PetscFE` object 695dce8aebaSBarry Smith - q - The `PetscQuadrature` object 69620cf1dd8SToby Isaac 69720cf1dd8SToby Isaac Level: intermediate 69820cf1dd8SToby Isaac 699dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, `PetscFECreate()`, `PetscFESetQuadrature()`, `PetscFESetFaceQuadrature()` 70020cf1dd8SToby Isaac @*/ 701d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetFaceQuadrature(PetscFE fem, PetscQuadrature q) 702d71ae5a4SJacob Faibussowitsch { 703ef0bb6c7SMatthew G. Knepley PetscInt Nc, qNc; 70420cf1dd8SToby Isaac 70520cf1dd8SToby Isaac PetscFunctionBegin; 70620cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 70726add6b9SMatthew G. Knepley if (q == fem->faceQuadrature) PetscFunctionReturn(PETSC_SUCCESS); 7089566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fem, &Nc)); 7099566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetNumComponents(q, &qNc)); 71063a3b9bcSJacob Faibussowitsch PetscCheck(!(qNc != 1) || !(Nc != qNc), PetscObjectComm((PetscObject)fem), PETSC_ERR_ARG_SIZ, "FE components %" PetscInt_FMT " != Quadrature components %" PetscInt_FMT " and non-scalar quadrature", Nc, qNc); 7119566063dSJacob Faibussowitsch PetscCall(PetscTabulationDestroy(&fem->Tf)); 71226add6b9SMatthew G. Knepley PetscCall(PetscObjectReference((PetscObject)q)); 7139566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&fem->faceQuadrature)); 71420cf1dd8SToby Isaac fem->faceQuadrature = q; 7153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 71620cf1dd8SToby Isaac } 71720cf1dd8SToby Isaac 7185dc5c000SMatthew G. Knepley /*@ 719dce8aebaSBarry Smith PetscFECopyQuadrature - Copy both volumetric and surface quadrature to a new `PetscFE` 7205dc5c000SMatthew G. Knepley 721*20f4b53cSBarry Smith Not Collective 7225dc5c000SMatthew G. Knepley 7235dc5c000SMatthew G. Knepley Input Parameters: 724dce8aebaSBarry Smith + sfe - The `PetscFE` source for the quadratures 725dce8aebaSBarry Smith - tfe - The `PetscFE` target for the quadratures 7265dc5c000SMatthew G. Knepley 7275dc5c000SMatthew G. Knepley Level: intermediate 7285dc5c000SMatthew G. Knepley 729dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, `PetscFECreate()`, `PetscFESetQuadrature()`, `PetscFESetFaceQuadrature()` 7305dc5c000SMatthew G. Knepley @*/ 731d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECopyQuadrature(PetscFE sfe, PetscFE tfe) 732d71ae5a4SJacob Faibussowitsch { 7335dc5c000SMatthew G. Knepley PetscQuadrature q; 7345dc5c000SMatthew G. Knepley 7355dc5c000SMatthew G. Knepley PetscFunctionBegin; 7365dc5c000SMatthew G. Knepley PetscValidHeaderSpecific(sfe, PETSCFE_CLASSID, 1); 7375dc5c000SMatthew G. Knepley PetscValidHeaderSpecific(tfe, PETSCFE_CLASSID, 2); 7389566063dSJacob Faibussowitsch PetscCall(PetscFEGetQuadrature(sfe, &q)); 7399566063dSJacob Faibussowitsch PetscCall(PetscFESetQuadrature(tfe, q)); 7409566063dSJacob Faibussowitsch PetscCall(PetscFEGetFaceQuadrature(sfe, &q)); 7419566063dSJacob Faibussowitsch PetscCall(PetscFESetFaceQuadrature(tfe, q)); 7423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7435dc5c000SMatthew G. Knepley } 7445dc5c000SMatthew G. Knepley 74520cf1dd8SToby Isaac /*@C 74620cf1dd8SToby Isaac PetscFEGetNumDof - Returns the number of dofs (dual basis vectors) associated to mesh points on the reference cell of a given dimension 74720cf1dd8SToby Isaac 748*20f4b53cSBarry Smith Not Collective 74920cf1dd8SToby Isaac 75020cf1dd8SToby Isaac Input Parameter: 751dce8aebaSBarry Smith . fem - The `PetscFE` object 75220cf1dd8SToby Isaac 75320cf1dd8SToby Isaac Output Parameter: 75420cf1dd8SToby Isaac . numDof - Array with the number of dofs per dimension 75520cf1dd8SToby Isaac 75620cf1dd8SToby Isaac Level: intermediate 75720cf1dd8SToby Isaac 758dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscFECreate()` 75920cf1dd8SToby Isaac @*/ 760d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetNumDof(PetscFE fem, const PetscInt **numDof) 761d71ae5a4SJacob Faibussowitsch { 76220cf1dd8SToby Isaac PetscFunctionBegin; 76320cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 76420cf1dd8SToby Isaac PetscValidPointer(numDof, 2); 7659566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetNumDof(fem->dualSpace, numDof)); 7663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 76720cf1dd8SToby Isaac } 76820cf1dd8SToby Isaac 76920cf1dd8SToby Isaac /*@C 770ef0bb6c7SMatthew G. Knepley PetscFEGetCellTabulation - Returns the tabulation of the basis functions at the quadrature points on the reference cell 77120cf1dd8SToby Isaac 772*20f4b53cSBarry Smith Not Collective 77320cf1dd8SToby Isaac 774d8d19677SJose E. Roman Input Parameters: 775dce8aebaSBarry Smith + fem - The `PetscFE` object 776f9244615SMatthew G. Knepley - k - The highest derivative we need to tabulate, very often 1 77720cf1dd8SToby Isaac 778ef0bb6c7SMatthew G. Knepley Output Parameter: 779ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at quadrature points 78020cf1dd8SToby Isaac 78120cf1dd8SToby Isaac Level: intermediate 78220cf1dd8SToby Isaac 783dce8aebaSBarry Smith Note: 784dce8aebaSBarry Smith .vb 785dce8aebaSBarry Smith T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 786dce8aebaSBarry Smith T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 787dce8aebaSBarry Smith T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 788dce8aebaSBarry Smith .ve 789dce8aebaSBarry Smith 790dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscTabulation`, `PetscFECreateTabulation()`, `PetscTabulationDestroy()` 79120cf1dd8SToby Isaac @*/ 792d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetCellTabulation(PetscFE fem, PetscInt k, PetscTabulation *T) 793d71ae5a4SJacob Faibussowitsch { 79420cf1dd8SToby Isaac PetscInt npoints; 79520cf1dd8SToby Isaac const PetscReal *points; 79620cf1dd8SToby Isaac 79720cf1dd8SToby Isaac PetscFunctionBegin; 79820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 799064a246eSJacob Faibussowitsch PetscValidPointer(T, 3); 8009566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetData(fem->quadrature, NULL, NULL, &npoints, &points, NULL)); 8019566063dSJacob Faibussowitsch if (!fem->T) PetscCall(PetscFECreateTabulation(fem, 1, npoints, points, k, &fem->T)); 8021dca8a05SBarry Smith PetscCheck(!fem->T || k <= fem->T->K, PetscObjectComm((PetscObject)fem), PETSC_ERR_ARG_OUTOFRANGE, "Requested %" PetscInt_FMT " derivatives, but only tabulated %" PetscInt_FMT, k, fem->T->K); 803ef0bb6c7SMatthew G. Knepley *T = fem->T; 8043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 80520cf1dd8SToby Isaac } 80620cf1dd8SToby Isaac 8072b99622eSMatthew G. Knepley /*@C 808ef0bb6c7SMatthew G. Knepley PetscFEGetFaceTabulation - Returns the tabulation of the basis functions at the face quadrature points for each face of the reference cell 8092b99622eSMatthew G. Knepley 810*20f4b53cSBarry Smith Not Collective 8112b99622eSMatthew G. Knepley 812d8d19677SJose E. Roman Input Parameters: 813dce8aebaSBarry Smith + fem - The `PetscFE` object 814f9244615SMatthew G. Knepley - k - The highest derivative we need to tabulate, very often 1 8152b99622eSMatthew G. Knepley 8162b99622eSMatthew G. Knepley Output Parameters: 817a5b23f4aSJose E. Roman . Tf - The basis function values and derivatives at face quadrature points 8182b99622eSMatthew G. Knepley 8192b99622eSMatthew G. Knepley Level: intermediate 8202b99622eSMatthew G. Knepley 821dce8aebaSBarry Smith Note: 822dce8aebaSBarry Smith .vb 823dce8aebaSBarry Smith T->T[0] = Bf[((f*Nq + q)*pdim + i)*Nc + c] is the value at point f,q for basis function i and component c 824dce8aebaSBarry Smith T->T[1] = Df[(((f*Nq + q)*pdim + i)*Nc + c)*dim + d] is the derivative value at point f,q for basis function i, component c, in direction d 825dce8aebaSBarry Smith T->T[2] = Hf[((((f*Nq + q)*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point f,q for basis function i, component c, in directions d and e 826dce8aebaSBarry Smith .ve 827dce8aebaSBarry Smith 828dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscTabulation`, `PetscFEGetCellTabulation()`, `PetscFECreateTabulation()`, `PetscTabulationDestroy()` 8292b99622eSMatthew G. Knepley @*/ 830d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetFaceTabulation(PetscFE fem, PetscInt k, PetscTabulation *Tf) 831d71ae5a4SJacob Faibussowitsch { 83220cf1dd8SToby Isaac PetscFunctionBegin; 83320cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 834064a246eSJacob Faibussowitsch PetscValidPointer(Tf, 3); 835ef0bb6c7SMatthew G. Knepley if (!fem->Tf) { 83620cf1dd8SToby Isaac const PetscReal xi0[3] = {-1., -1., -1.}; 83720cf1dd8SToby Isaac PetscReal v0[3], J[9], detJ; 83820cf1dd8SToby Isaac PetscQuadrature fq; 83920cf1dd8SToby Isaac PetscDualSpace sp; 84020cf1dd8SToby Isaac DM dm; 84120cf1dd8SToby Isaac const PetscInt *faces; 84220cf1dd8SToby Isaac PetscInt dim, numFaces, f, npoints, q; 84320cf1dd8SToby Isaac const PetscReal *points; 84420cf1dd8SToby Isaac PetscReal *facePoints; 84520cf1dd8SToby Isaac 8469566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fem, &sp)); 8479566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(sp, &dm)); 8489566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 8499566063dSJacob Faibussowitsch PetscCall(DMPlexGetConeSize(dm, 0, &numFaces)); 8509566063dSJacob Faibussowitsch PetscCall(DMPlexGetCone(dm, 0, &faces)); 8519566063dSJacob Faibussowitsch PetscCall(PetscFEGetFaceQuadrature(fem, &fq)); 85220cf1dd8SToby Isaac if (fq) { 8539566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetData(fq, NULL, NULL, &npoints, &points, NULL)); 8549566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numFaces * npoints * dim, &facePoints)); 85520cf1dd8SToby Isaac for (f = 0; f < numFaces; ++f) { 8569566063dSJacob Faibussowitsch PetscCall(DMPlexComputeCellGeometryFEM(dm, faces[f], NULL, v0, J, NULL, &detJ)); 85720cf1dd8SToby Isaac for (q = 0; q < npoints; ++q) CoordinatesRefToReal(dim, dim - 1, xi0, v0, J, &points[q * (dim - 1)], &facePoints[(f * npoints + q) * dim]); 85820cf1dd8SToby Isaac } 8599566063dSJacob Faibussowitsch PetscCall(PetscFECreateTabulation(fem, numFaces, npoints, facePoints, k, &fem->Tf)); 8609566063dSJacob Faibussowitsch PetscCall(PetscFree(facePoints)); 86120cf1dd8SToby Isaac } 86220cf1dd8SToby Isaac } 8631dca8a05SBarry Smith PetscCheck(!fem->Tf || k <= fem->Tf->K, PetscObjectComm((PetscObject)fem), PETSC_ERR_ARG_OUTOFRANGE, "Requested %" PetscInt_FMT " derivatives, but only tabulated %" PetscInt_FMT, k, fem->Tf->K); 864ef0bb6c7SMatthew G. Knepley *Tf = fem->Tf; 8653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 86620cf1dd8SToby Isaac } 86720cf1dd8SToby Isaac 8682b99622eSMatthew G. Knepley /*@C 869ef0bb6c7SMatthew G. Knepley PetscFEGetFaceCentroidTabulation - Returns the tabulation of the basis functions at the face centroid points 8702b99622eSMatthew G. Knepley 871*20f4b53cSBarry Smith Not Collective 8722b99622eSMatthew G. Knepley 8732b99622eSMatthew G. Knepley Input Parameter: 874dce8aebaSBarry Smith . fem - The `PetscFE` object 8752b99622eSMatthew G. Knepley 8762b99622eSMatthew G. Knepley Output Parameters: 877ef0bb6c7SMatthew G. Knepley . Tc - The basis function values at face centroid points 8782b99622eSMatthew G. Knepley 8792b99622eSMatthew G. Knepley Level: intermediate 8802b99622eSMatthew G. Knepley 881dce8aebaSBarry Smith Note: 882dce8aebaSBarry Smith .vb 883dce8aebaSBarry Smith T->T[0] = Bf[(f*pdim + i)*Nc + c] is the value at point f for basis function i and component c 884dce8aebaSBarry Smith .ve 885dce8aebaSBarry Smith 886dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscTabulation`, `PetscFEGetFaceTabulation()`, `PetscFEGetCellTabulation()`, `PetscFECreateTabulation()`, `PetscTabulationDestroy()` 8872b99622eSMatthew G. Knepley @*/ 888d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetFaceCentroidTabulation(PetscFE fem, PetscTabulation *Tc) 889d71ae5a4SJacob Faibussowitsch { 89020cf1dd8SToby Isaac PetscFunctionBegin; 89120cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 892ef0bb6c7SMatthew G. Knepley PetscValidPointer(Tc, 2); 893ef0bb6c7SMatthew G. Knepley if (!fem->Tc) { 89420cf1dd8SToby Isaac PetscDualSpace sp; 89520cf1dd8SToby Isaac DM dm; 89620cf1dd8SToby Isaac const PetscInt *cone; 89720cf1dd8SToby Isaac PetscReal *centroids; 89820cf1dd8SToby Isaac PetscInt dim, numFaces, f; 89920cf1dd8SToby Isaac 9009566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fem, &sp)); 9019566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(sp, &dm)); 9029566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 9039566063dSJacob Faibussowitsch PetscCall(DMPlexGetConeSize(dm, 0, &numFaces)); 9049566063dSJacob Faibussowitsch PetscCall(DMPlexGetCone(dm, 0, &cone)); 9059566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numFaces * dim, ¢roids)); 9069566063dSJacob Faibussowitsch for (f = 0; f < numFaces; ++f) PetscCall(DMPlexComputeCellGeometryFVM(dm, cone[f], NULL, ¢roids[f * dim], NULL)); 9079566063dSJacob Faibussowitsch PetscCall(PetscFECreateTabulation(fem, 1, numFaces, centroids, 0, &fem->Tc)); 9089566063dSJacob Faibussowitsch PetscCall(PetscFree(centroids)); 90920cf1dd8SToby Isaac } 910ef0bb6c7SMatthew G. Knepley *Tc = fem->Tc; 9113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 91220cf1dd8SToby Isaac } 91320cf1dd8SToby Isaac 91420cf1dd8SToby Isaac /*@C 915ef0bb6c7SMatthew G. Knepley PetscFECreateTabulation - Tabulates the basis functions, and perhaps derivatives, at the points provided. 91620cf1dd8SToby Isaac 917*20f4b53cSBarry Smith Not Collective 91820cf1dd8SToby Isaac 91920cf1dd8SToby Isaac Input Parameters: 920dce8aebaSBarry Smith + fem - The `PetscFE` object 921ef0bb6c7SMatthew G. Knepley . nrepl - The number of replicas 922ef0bb6c7SMatthew G. Knepley . npoints - The number of tabulation points in a replica 923ef0bb6c7SMatthew G. Knepley . points - The tabulation point coordinates 924ef0bb6c7SMatthew G. Knepley - K - The number of derivatives calculated 92520cf1dd8SToby Isaac 926ef0bb6c7SMatthew G. Knepley Output Parameter: 927ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at tabulation points 92820cf1dd8SToby Isaac 92920cf1dd8SToby Isaac Level: intermediate 93020cf1dd8SToby Isaac 931dce8aebaSBarry Smith Note: 932dce8aebaSBarry Smith .vb 933dce8aebaSBarry Smith T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 934dce8aebaSBarry Smith T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 935dce8aebaSBarry Smith T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 936dce8aebaSBarry Smith 937dce8aebaSBarry Smith .seealso: `PetscTabulation`, `PetscFEGetCellTabulation()`, `PetscTabulationDestroy()` 93820cf1dd8SToby Isaac @*/ 939d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateTabulation(PetscFE fem, PetscInt nrepl, PetscInt npoints, const PetscReal points[], PetscInt K, PetscTabulation *T) 940d71ae5a4SJacob Faibussowitsch { 94120cf1dd8SToby Isaac DM dm; 942ef0bb6c7SMatthew G. Knepley PetscDualSpace Q; 943ef0bb6c7SMatthew G. Knepley PetscInt Nb; /* Dimension of FE space P */ 944ef0bb6c7SMatthew G. Knepley PetscInt Nc; /* Field components */ 945ef0bb6c7SMatthew G. Knepley PetscInt cdim; /* Reference coordinate dimension */ 946ef0bb6c7SMatthew G. Knepley PetscInt k; 94720cf1dd8SToby Isaac 94820cf1dd8SToby Isaac PetscFunctionBegin; 949ef0bb6c7SMatthew G. Knepley if (!npoints || !fem->dualSpace || K < 0) { 950ef0bb6c7SMatthew G. Knepley *T = NULL; 9513ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 95220cf1dd8SToby Isaac } 95320cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 954dadcf809SJacob Faibussowitsch PetscValidRealPointer(points, 4); 95540a2aa30SMatthew G. Knepley PetscValidPointer(T, 6); 9569566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fem, &Q)); 9579566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(Q, &dm)); 9589566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &cdim)); 9599566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDimension(Q, &Nb)); 9609566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fem, &Nc)); 9619566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(1, T)); 962ef0bb6c7SMatthew G. Knepley (*T)->K = !cdim ? 0 : K; 963ef0bb6c7SMatthew G. Knepley (*T)->Nr = nrepl; 964ef0bb6c7SMatthew G. Knepley (*T)->Np = npoints; 965ef0bb6c7SMatthew G. Knepley (*T)->Nb = Nb; 966ef0bb6c7SMatthew G. Knepley (*T)->Nc = Nc; 967ef0bb6c7SMatthew G. Knepley (*T)->cdim = cdim; 9689566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*T)->K + 1, &(*T)->T)); 96948a46eb9SPierre Jolivet for (k = 0; k <= (*T)->K; ++k) PetscCall(PetscMalloc1(nrepl * npoints * Nb * Nc * PetscPowInt(cdim, k), &(*T)->T[k])); 970dbbe0bcdSBarry Smith PetscUseTypeMethod(fem, createtabulation, nrepl * npoints, points, K, *T); 9713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 97220cf1dd8SToby Isaac } 97320cf1dd8SToby Isaac 9742b99622eSMatthew G. Knepley /*@C 975ef0bb6c7SMatthew G. Knepley PetscFEComputeTabulation - Tabulates the basis functions, and perhaps derivatives, at the points provided. 9762b99622eSMatthew G. Knepley 977*20f4b53cSBarry Smith Not Collective 9782b99622eSMatthew G. Knepley 9792b99622eSMatthew G. Knepley Input Parameters: 980dce8aebaSBarry Smith + fem - The `PetscFE` object 9812b99622eSMatthew G. Knepley . npoints - The number of tabulation points 9822b99622eSMatthew G. Knepley . points - The tabulation point coordinates 983ef0bb6c7SMatthew G. Knepley . K - The number of derivatives calculated 984ef0bb6c7SMatthew G. Knepley - T - An existing tabulation object with enough allocated space 985ef0bb6c7SMatthew G. Knepley 986ef0bb6c7SMatthew G. Knepley Output Parameter: 987ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at tabulation points 9882b99622eSMatthew G. Knepley 9892b99622eSMatthew G. Knepley Level: intermediate 9902b99622eSMatthew G. Knepley 991dce8aebaSBarry Smith Note: 992dce8aebaSBarry Smith .vb 993dce8aebaSBarry Smith T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 994dce8aebaSBarry Smith T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 995dce8aebaSBarry Smith T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 996dce8aebaSBarry Smith .ve 997dce8aebaSBarry Smith 998dce8aebaSBarry Smith .seealso: `PetscTabulation`, `PetscFEGetCellTabulation()`, `PetscTabulationDestroy()` 9992b99622eSMatthew G. Knepley @*/ 1000d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEComputeTabulation(PetscFE fem, PetscInt npoints, const PetscReal points[], PetscInt K, PetscTabulation T) 1001d71ae5a4SJacob Faibussowitsch { 1002ef0bb6c7SMatthew G. Knepley PetscFunctionBeginHot; 10033ba16761SJacob Faibussowitsch if (!npoints || !fem->dualSpace || K < 0) PetscFunctionReturn(PETSC_SUCCESS); 1004ef0bb6c7SMatthew G. Knepley PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 1005dadcf809SJacob Faibussowitsch PetscValidRealPointer(points, 3); 1006ef0bb6c7SMatthew G. Knepley PetscValidPointer(T, 5); 100776bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { 100820cf1dd8SToby Isaac DM dm; 1009ef0bb6c7SMatthew G. Knepley PetscDualSpace Q; 1010ef0bb6c7SMatthew G. Knepley PetscInt Nb; /* Dimension of FE space P */ 1011ef0bb6c7SMatthew G. Knepley PetscInt Nc; /* Field components */ 1012ef0bb6c7SMatthew G. Knepley PetscInt cdim; /* Reference coordinate dimension */ 1013ef0bb6c7SMatthew G. Knepley 10149566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fem, &Q)); 10159566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(Q, &dm)); 10169566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &cdim)); 10179566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDimension(Q, &Nb)); 10189566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fem, &Nc)); 101963a3b9bcSJacob Faibussowitsch PetscCheck(T->K == (!cdim ? 0 : K), PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation K %" PetscInt_FMT " must match requested K %" PetscInt_FMT, T->K, !cdim ? 0 : K); 102063a3b9bcSJacob Faibussowitsch PetscCheck(T->Nb == Nb, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation Nb %" PetscInt_FMT " must match requested Nb %" PetscInt_FMT, T->Nb, Nb); 102163a3b9bcSJacob Faibussowitsch PetscCheck(T->Nc == Nc, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation Nc %" PetscInt_FMT " must match requested Nc %" PetscInt_FMT, T->Nc, Nc); 102263a3b9bcSJacob Faibussowitsch PetscCheck(T->cdim == cdim, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation cdim %" PetscInt_FMT " must match requested cdim %" PetscInt_FMT, T->cdim, cdim); 1023ef0bb6c7SMatthew G. Knepley } 1024ef0bb6c7SMatthew G. Knepley T->Nr = 1; 1025ef0bb6c7SMatthew G. Knepley T->Np = npoints; 1026dbbe0bcdSBarry Smith PetscUseTypeMethod(fem, createtabulation, npoints, points, K, T); 10273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1028ef0bb6c7SMatthew G. Knepley } 1029ef0bb6c7SMatthew G. Knepley 1030ef0bb6c7SMatthew G. Knepley /*@C 1031ef0bb6c7SMatthew G. Knepley PetscTabulationDestroy - Frees memory from the associated tabulation. 1032ef0bb6c7SMatthew G. Knepley 1033*20f4b53cSBarry Smith Not Collective 1034ef0bb6c7SMatthew G. Knepley 1035ef0bb6c7SMatthew G. Knepley Input Parameter: 1036ef0bb6c7SMatthew G. Knepley . T - The tabulation 1037ef0bb6c7SMatthew G. Knepley 1038ef0bb6c7SMatthew G. Knepley Level: intermediate 1039ef0bb6c7SMatthew G. Knepley 1040dce8aebaSBarry Smith .seealso: `PetscTabulation`, `PetscFECreateTabulation()`, `PetscFEGetCellTabulation()` 1041ef0bb6c7SMatthew G. Knepley @*/ 1042d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscTabulationDestroy(PetscTabulation *T) 1043d71ae5a4SJacob Faibussowitsch { 1044ef0bb6c7SMatthew G. Knepley PetscInt k; 104520cf1dd8SToby Isaac 104620cf1dd8SToby Isaac PetscFunctionBegin; 1047ef0bb6c7SMatthew G. Knepley PetscValidPointer(T, 1); 10483ba16761SJacob Faibussowitsch if (!T || !(*T)) PetscFunctionReturn(PETSC_SUCCESS); 10499566063dSJacob Faibussowitsch for (k = 0; k <= (*T)->K; ++k) PetscCall(PetscFree((*T)->T[k])); 10509566063dSJacob Faibussowitsch PetscCall(PetscFree((*T)->T)); 10519566063dSJacob Faibussowitsch PetscCall(PetscFree(*T)); 1052ef0bb6c7SMatthew G. Knepley *T = NULL; 10533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 105420cf1dd8SToby Isaac } 105520cf1dd8SToby Isaac 1056d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscFECreatePointTrace(PetscFE fe, PetscInt refPoint, PetscFE *trFE) 1057d71ae5a4SJacob Faibussowitsch { 105820cf1dd8SToby Isaac PetscSpace bsp, bsubsp; 105920cf1dd8SToby Isaac PetscDualSpace dsp, dsubsp; 106020cf1dd8SToby Isaac PetscInt dim, depth, numComp, i, j, coneSize, order; 106120cf1dd8SToby Isaac PetscFEType type; 106220cf1dd8SToby Isaac DM dm; 106320cf1dd8SToby Isaac DMLabel label; 106420cf1dd8SToby Isaac PetscReal *xi, *v, *J, detJ; 1065db11e2ebSMatthew G. Knepley const char *name; 106620cf1dd8SToby Isaac PetscQuadrature origin, fullQuad, subQuad; 106720cf1dd8SToby Isaac 106820cf1dd8SToby Isaac PetscFunctionBegin; 106920cf1dd8SToby Isaac PetscValidHeaderSpecific(fe, PETSCFE_CLASSID, 1); 107020cf1dd8SToby Isaac PetscValidPointer(trFE, 3); 10719566063dSJacob Faibussowitsch PetscCall(PetscFEGetBasisSpace(fe, &bsp)); 10729566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &dsp)); 10739566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(dsp, &dm)); 10749566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 10759566063dSJacob Faibussowitsch PetscCall(DMPlexGetDepthLabel(dm, &label)); 10769566063dSJacob Faibussowitsch PetscCall(DMLabelGetValue(label, refPoint, &depth)); 10779566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(depth, &xi)); 10789566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(dim, &v)); 10799566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(dim * dim, &J)); 108020cf1dd8SToby Isaac for (i = 0; i < depth; i++) xi[i] = 0.; 10819566063dSJacob Faibussowitsch PetscCall(PetscQuadratureCreate(PETSC_COMM_SELF, &origin)); 10829566063dSJacob Faibussowitsch PetscCall(PetscQuadratureSetData(origin, depth, 0, 1, xi, NULL)); 10839566063dSJacob Faibussowitsch PetscCall(DMPlexComputeCellGeometryFEM(dm, refPoint, origin, v, J, NULL, &detJ)); 108420cf1dd8SToby Isaac /* CellGeometryFEM computes the expanded Jacobian, we want the true jacobian */ 108520cf1dd8SToby Isaac for (i = 1; i < dim; i++) { 1086ad540459SPierre Jolivet for (j = 0; j < depth; j++) J[i * depth + j] = J[i * dim + j]; 108720cf1dd8SToby Isaac } 10889566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&origin)); 10899566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetPointSubspace(dsp, refPoint, &dsubsp)); 10909566063dSJacob Faibussowitsch PetscCall(PetscSpaceCreateSubspace(bsp, dsubsp, v, J, NULL, NULL, PETSC_OWN_POINTER, &bsubsp)); 10919566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetUp(bsubsp)); 10929566063dSJacob Faibussowitsch PetscCall(PetscFECreate(PetscObjectComm((PetscObject)fe), trFE)); 10939566063dSJacob Faibussowitsch PetscCall(PetscFEGetType(fe, &type)); 10949566063dSJacob Faibussowitsch PetscCall(PetscFESetType(*trFE, type)); 10959566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fe, &numComp)); 10969566063dSJacob Faibussowitsch PetscCall(PetscFESetNumComponents(*trFE, numComp)); 10979566063dSJacob Faibussowitsch PetscCall(PetscFESetBasisSpace(*trFE, bsubsp)); 10989566063dSJacob Faibussowitsch PetscCall(PetscFESetDualSpace(*trFE, dsubsp)); 10999566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)fe, &name)); 11009566063dSJacob Faibussowitsch if (name) PetscCall(PetscFESetName(*trFE, name)); 11019566063dSJacob Faibussowitsch PetscCall(PetscFEGetQuadrature(fe, &fullQuad)); 11029566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetOrder(fullQuad, &order)); 11039566063dSJacob Faibussowitsch PetscCall(DMPlexGetConeSize(dm, refPoint, &coneSize)); 11048b6ef6a4SJed Brown if (coneSize == 2 * depth) PetscCall(PetscDTGaussTensorQuadrature(depth, 1, (order + 2) / 2, -1., 1., &subQuad)); 11058b6ef6a4SJed Brown else PetscCall(PetscDTSimplexQuadrature(depth, order, PETSCDTSIMPLEXQUAD_DEFAULT, &subQuad)); 11069566063dSJacob Faibussowitsch PetscCall(PetscFESetQuadrature(*trFE, subQuad)); 11079566063dSJacob Faibussowitsch PetscCall(PetscFESetUp(*trFE)); 11089566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&subQuad)); 11099566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&bsubsp)); 11103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 111120cf1dd8SToby Isaac } 111220cf1dd8SToby Isaac 1113d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateHeightTrace(PetscFE fe, PetscInt height, PetscFE *trFE) 1114d71ae5a4SJacob Faibussowitsch { 111520cf1dd8SToby Isaac PetscInt hStart, hEnd; 111620cf1dd8SToby Isaac PetscDualSpace dsp; 111720cf1dd8SToby Isaac DM dm; 111820cf1dd8SToby Isaac 111920cf1dd8SToby Isaac PetscFunctionBegin; 112020cf1dd8SToby Isaac PetscValidHeaderSpecific(fe, PETSCFE_CLASSID, 1); 112120cf1dd8SToby Isaac PetscValidPointer(trFE, 3); 112220cf1dd8SToby Isaac *trFE = NULL; 11239566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &dsp)); 11249566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(dsp, &dm)); 11259566063dSJacob Faibussowitsch PetscCall(DMPlexGetHeightStratum(dm, height, &hStart, &hEnd)); 11263ba16761SJacob Faibussowitsch if (hEnd <= hStart) PetscFunctionReturn(PETSC_SUCCESS); 11279566063dSJacob Faibussowitsch PetscCall(PetscFECreatePointTrace(fe, hStart, trFE)); 11283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 112920cf1dd8SToby Isaac } 113020cf1dd8SToby Isaac 113120cf1dd8SToby Isaac /*@ 113220cf1dd8SToby Isaac PetscFEGetDimension - Get the dimension of the finite element space on a cell 113320cf1dd8SToby Isaac 1134*20f4b53cSBarry Smith Not Collective 113520cf1dd8SToby Isaac 113620cf1dd8SToby Isaac Input Parameter: 1137dce8aebaSBarry Smith . fe - The `PetscFE` 113820cf1dd8SToby Isaac 113920cf1dd8SToby Isaac Output Parameter: 114020cf1dd8SToby Isaac . dim - The dimension 114120cf1dd8SToby Isaac 114220cf1dd8SToby Isaac Level: intermediate 114320cf1dd8SToby Isaac 1144dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFECreate()`, `PetscSpaceGetDimension()`, `PetscDualSpaceGetDimension()` 114520cf1dd8SToby Isaac @*/ 1146d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetDimension(PetscFE fem, PetscInt *dim) 1147d71ae5a4SJacob Faibussowitsch { 114820cf1dd8SToby Isaac PetscFunctionBegin; 114920cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 1150dadcf809SJacob Faibussowitsch PetscValidIntPointer(dim, 2); 1151dbbe0bcdSBarry Smith PetscTryTypeMethod(fem, getdimension, dim); 11523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 115320cf1dd8SToby Isaac } 115420cf1dd8SToby Isaac 11554bee2e38SMatthew G. Knepley /*@C 11564bee2e38SMatthew G. Knepley PetscFEPushforward - Map the reference element function to real space 11574bee2e38SMatthew G. Knepley 11584bee2e38SMatthew G. Knepley Input Parameters: 1159dce8aebaSBarry Smith + fe - The `PetscFE` 11604bee2e38SMatthew G. Knepley . fegeom - The cell geometry 11614bee2e38SMatthew G. Knepley . Nv - The number of function values 11624bee2e38SMatthew G. Knepley - vals - The function values 11634bee2e38SMatthew G. Knepley 11644bee2e38SMatthew G. Knepley Output Parameter: 11654bee2e38SMatthew G. Knepley . vals - The transformed function values 11664bee2e38SMatthew G. Knepley 11674bee2e38SMatthew G. Knepley Level: advanced 11684bee2e38SMatthew G. Knepley 1169dce8aebaSBarry Smith Notes: 1170dce8aebaSBarry Smith This just forwards the call onto `PetscDualSpacePushforward()`. 11714bee2e38SMatthew G. Knepley 1172dce8aebaSBarry Smith It only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 11732edcad52SToby Isaac 1174dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEGeom`, `PetscDualSpace`, `PetscDualSpacePushforward()` 11754bee2e38SMatthew G. Knepley @*/ 1176d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEPushforward(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 1177d71ae5a4SJacob Faibussowitsch { 11782ae266adSMatthew G. Knepley PetscFunctionBeginHot; 11799566063dSJacob Faibussowitsch PetscCall(PetscDualSpacePushforward(fe->dualSpace, fegeom, Nv, fe->numComponents, vals)); 11803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11814bee2e38SMatthew G. Knepley } 11824bee2e38SMatthew G. Knepley 11834bee2e38SMatthew G. Knepley /*@C 11844bee2e38SMatthew G. Knepley PetscFEPushforwardGradient - Map the reference element function gradient to real space 11854bee2e38SMatthew G. Knepley 11864bee2e38SMatthew G. Knepley Input Parameters: 1187dce8aebaSBarry Smith + fe - The `PetscFE` 11884bee2e38SMatthew G. Knepley . fegeom - The cell geometry 11894bee2e38SMatthew G. Knepley . Nv - The number of function gradient values 11904bee2e38SMatthew G. Knepley - vals - The function gradient values 11914bee2e38SMatthew G. Knepley 11924bee2e38SMatthew G. Knepley Output Parameter: 11934bee2e38SMatthew G. Knepley . vals - The transformed function gradient values 11944bee2e38SMatthew G. Knepley 11954bee2e38SMatthew G. Knepley Level: advanced 11964bee2e38SMatthew G. Knepley 1197dce8aebaSBarry Smith Notes: 1198dce8aebaSBarry Smith This just forwards the call onto `PetscDualSpacePushforwardGradient()`. 11994bee2e38SMatthew G. Knepley 1200dce8aebaSBarry Smith It only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 12012edcad52SToby Isaac 1202dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEGeom`, `PetscDualSpace`, `PetscFEPushforward()`, `PetscDualSpacePushforwardGradient()`, `PetscDualSpacePushforward()` 12034bee2e38SMatthew G. Knepley @*/ 1204d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEPushforwardGradient(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 1205d71ae5a4SJacob Faibussowitsch { 12062ae266adSMatthew G. Knepley PetscFunctionBeginHot; 12079566063dSJacob Faibussowitsch PetscCall(PetscDualSpacePushforwardGradient(fe->dualSpace, fegeom, Nv, fe->numComponents, vals)); 12083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12094bee2e38SMatthew G. Knepley } 12104bee2e38SMatthew G. Knepley 1211f9244615SMatthew G. Knepley /*@C 1212f9244615SMatthew G. Knepley PetscFEPushforwardHessian - Map the reference element function Hessian to real space 1213f9244615SMatthew G. Knepley 1214f9244615SMatthew G. Knepley Input Parameters: 1215dce8aebaSBarry Smith + fe - The `PetscFE` 1216f9244615SMatthew G. Knepley . fegeom - The cell geometry 1217f9244615SMatthew G. Knepley . Nv - The number of function Hessian values 1218f9244615SMatthew G. Knepley - vals - The function Hessian values 1219f9244615SMatthew G. Knepley 1220f9244615SMatthew G. Knepley Output Parameter: 1221f9244615SMatthew G. Knepley . vals - The transformed function Hessian values 1222f9244615SMatthew G. Knepley 1223f9244615SMatthew G. Knepley Level: advanced 1224f9244615SMatthew G. Knepley 1225dce8aebaSBarry Smith Notes: 1226dce8aebaSBarry Smith This just forwards the call onto `PetscDualSpacePushforwardHessian()`. 1227f9244615SMatthew G. Knepley 1228dce8aebaSBarry Smith It only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 1229f9244615SMatthew G. Knepley 1230dce8aebaSBarry Smith Developer Note: 1231dce8aebaSBarry Smith It is unclear why all these one line convenience routines are desirable 1232dce8aebaSBarry Smith 1233dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscFEGeom`, `PetscDualSpace`, `PetscFEPushforward()`, `PetscDualSpacePushforwardHessian()`, `PetscDualSpacePushforward()` 1234f9244615SMatthew G. Knepley @*/ 1235d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEPushforwardHessian(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 1236d71ae5a4SJacob Faibussowitsch { 1237f9244615SMatthew G. Knepley PetscFunctionBeginHot; 12389566063dSJacob Faibussowitsch PetscCall(PetscDualSpacePushforwardHessian(fe->dualSpace, fegeom, Nv, fe->numComponents, vals)); 12393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1240f9244615SMatthew G. Knepley } 1241f9244615SMatthew G. Knepley 124220cf1dd8SToby Isaac /* 124320cf1dd8SToby Isaac Purpose: Compute element vector for chunk of elements 124420cf1dd8SToby Isaac 124520cf1dd8SToby Isaac Input: 124620cf1dd8SToby Isaac Sizes: 124720cf1dd8SToby Isaac Ne: number of elements 124820cf1dd8SToby Isaac Nf: number of fields 124920cf1dd8SToby Isaac PetscFE 125020cf1dd8SToby Isaac dim: spatial dimension 125120cf1dd8SToby Isaac Nb: number of basis functions 125220cf1dd8SToby Isaac Nc: number of field components 125320cf1dd8SToby Isaac PetscQuadrature 125420cf1dd8SToby Isaac Nq: number of quadrature points 125520cf1dd8SToby Isaac 125620cf1dd8SToby Isaac Geometry: 125720cf1dd8SToby Isaac PetscFEGeom[Ne] possibly *Nq 125820cf1dd8SToby Isaac PetscReal v0s[dim] 125920cf1dd8SToby Isaac PetscReal n[dim] 126020cf1dd8SToby Isaac PetscReal jacobians[dim*dim] 126120cf1dd8SToby Isaac PetscReal jacobianInverses[dim*dim] 126220cf1dd8SToby Isaac PetscReal jacobianDeterminants 126320cf1dd8SToby Isaac FEM: 126420cf1dd8SToby Isaac PetscFE 126520cf1dd8SToby Isaac PetscQuadrature 126620cf1dd8SToby Isaac PetscReal quadPoints[Nq*dim] 126720cf1dd8SToby Isaac PetscReal quadWeights[Nq] 126820cf1dd8SToby Isaac PetscReal basis[Nq*Nb*Nc] 126920cf1dd8SToby Isaac PetscReal basisDer[Nq*Nb*Nc*dim] 127020cf1dd8SToby Isaac PetscScalar coefficients[Ne*Nb*Nc] 127120cf1dd8SToby Isaac PetscScalar elemVec[Ne*Nb*Nc] 127220cf1dd8SToby Isaac 127320cf1dd8SToby Isaac Problem: 127420cf1dd8SToby Isaac PetscInt f: the active field 127520cf1dd8SToby Isaac f0, f1 127620cf1dd8SToby Isaac 127720cf1dd8SToby Isaac Work Space: 127820cf1dd8SToby Isaac PetscFE 127920cf1dd8SToby Isaac PetscScalar f0[Nq*dim]; 128020cf1dd8SToby Isaac PetscScalar f1[Nq*dim*dim]; 128120cf1dd8SToby Isaac PetscScalar u[Nc]; 128220cf1dd8SToby Isaac PetscScalar gradU[Nc*dim]; 128320cf1dd8SToby Isaac PetscReal x[dim]; 128420cf1dd8SToby Isaac PetscScalar realSpaceDer[dim]; 128520cf1dd8SToby Isaac 128620cf1dd8SToby Isaac Purpose: Compute element vector for N_cb batches of elements 128720cf1dd8SToby Isaac 128820cf1dd8SToby Isaac Input: 128920cf1dd8SToby Isaac Sizes: 129020cf1dd8SToby Isaac N_cb: Number of serial cell batches 129120cf1dd8SToby Isaac 129220cf1dd8SToby Isaac Geometry: 129320cf1dd8SToby Isaac PetscReal v0s[Ne*dim] 129420cf1dd8SToby Isaac PetscReal jacobians[Ne*dim*dim] possibly *Nq 129520cf1dd8SToby Isaac PetscReal jacobianInverses[Ne*dim*dim] possibly *Nq 129620cf1dd8SToby Isaac PetscReal jacobianDeterminants[Ne] possibly *Nq 129720cf1dd8SToby Isaac FEM: 129820cf1dd8SToby Isaac static PetscReal quadPoints[Nq*dim] 129920cf1dd8SToby Isaac static PetscReal quadWeights[Nq] 130020cf1dd8SToby Isaac static PetscReal basis[Nq*Nb*Nc] 130120cf1dd8SToby Isaac static PetscReal basisDer[Nq*Nb*Nc*dim] 130220cf1dd8SToby Isaac PetscScalar coefficients[Ne*Nb*Nc] 130320cf1dd8SToby Isaac PetscScalar elemVec[Ne*Nb*Nc] 130420cf1dd8SToby Isaac 130520cf1dd8SToby Isaac ex62.c: 130620cf1dd8SToby Isaac PetscErrorCode PetscFEIntegrateResidualBatch(PetscInt Ne, PetscInt numFields, PetscInt field, PetscQuadrature quad[], const PetscScalar coefficients[], 130720cf1dd8SToby Isaac const PetscReal v0s[], const PetscReal jacobians[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], 130820cf1dd8SToby Isaac void (*f0_func)(const PetscScalar u[], const PetscScalar gradU[], const PetscReal x[], PetscScalar f0[]), 130920cf1dd8SToby Isaac void (*f1_func)(const PetscScalar u[], const PetscScalar gradU[], const PetscReal x[], PetscScalar f1[]), PetscScalar elemVec[]) 131020cf1dd8SToby Isaac 131120cf1dd8SToby Isaac ex52.c: 131220cf1dd8SToby Isaac PetscErrorCode IntegrateLaplacianBatchCPU(PetscInt Ne, PetscInt Nb, const PetscScalar coefficients[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscInt Nq, const PetscReal quadPoints[], const PetscReal quadWeights[], const PetscReal basisTabulation[], const PetscReal basisDerTabulation[], PetscScalar elemVec[], AppCtx *user) 131320cf1dd8SToby Isaac PetscErrorCode IntegrateElasticityBatchCPU(PetscInt Ne, PetscInt Nb, PetscInt Ncomp, const PetscScalar coefficients[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscInt Nq, const PetscReal quadPoints[], const PetscReal quadWeights[], const PetscReal basisTabulation[], const PetscReal basisDerTabulation[], PetscScalar elemVec[], AppCtx *user) 131420cf1dd8SToby Isaac 131520cf1dd8SToby Isaac ex52_integrateElement.cu 131620cf1dd8SToby Isaac __global__ void integrateElementQuadrature(int N_cb, realType *coefficients, realType *jacobianInverses, realType *jacobianDeterminants, realType *elemVec) 131720cf1dd8SToby Isaac 131820cf1dd8SToby Isaac PETSC_EXTERN PetscErrorCode IntegrateElementBatchGPU(PetscInt spatial_dim, PetscInt Ne, PetscInt Ncb, PetscInt Nbc, PetscInt Nbl, const PetscScalar coefficients[], 131920cf1dd8SToby Isaac const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscScalar elemVec[], 132020cf1dd8SToby Isaac PetscLogEvent event, PetscInt debug, PetscInt pde_op) 132120cf1dd8SToby Isaac 132220cf1dd8SToby Isaac ex52_integrateElementOpenCL.c: 132320cf1dd8SToby Isaac PETSC_EXTERN PetscErrorCode IntegrateElementBatchGPU(PetscInt spatial_dim, PetscInt Ne, PetscInt Ncb, PetscInt Nbc, PetscInt N_bl, const PetscScalar coefficients[], 132420cf1dd8SToby Isaac const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscScalar elemVec[], 132520cf1dd8SToby Isaac PetscLogEvent event, PetscInt debug, PetscInt pde_op) 132620cf1dd8SToby Isaac 132720cf1dd8SToby Isaac __kernel void integrateElementQuadrature(int N_cb, __global float *coefficients, __global float *jacobianInverses, __global float *jacobianDeterminants, __global float *elemVec) 132820cf1dd8SToby Isaac */ 132920cf1dd8SToby Isaac 133020cf1dd8SToby Isaac /*@C 133120cf1dd8SToby Isaac PetscFEIntegrate - Produce the integral for the given field for a chunk of elements by quadrature integration 133220cf1dd8SToby Isaac 1333*20f4b53cSBarry Smith Not Collective 133420cf1dd8SToby Isaac 133520cf1dd8SToby Isaac Input Parameters: 1336dce8aebaSBarry Smith + prob - The `PetscDS` specifying the discretizations and continuum functions 133720cf1dd8SToby Isaac . field - The field being integrated 133820cf1dd8SToby Isaac . Ne - The number of elements in the chunk 133920cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 134020cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 1341dce8aebaSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 134220cf1dd8SToby Isaac - coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 134320cf1dd8SToby Isaac 13447a7aea1fSJed Brown Output Parameter: 134520cf1dd8SToby Isaac . integral - the integral for this field 134620cf1dd8SToby Isaac 13472b99622eSMatthew G. Knepley Level: intermediate 134820cf1dd8SToby Isaac 1349dce8aebaSBarry Smith Developer Note: 1350dce8aebaSBarry Smith The function name begins with `PetscFE` and yet the first argument is `PetscDS` and it has no `PetscFE` arguments. 1351dce8aebaSBarry Smith 1352dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscDS`, `PetscFEIntegrateResidual()`, `PetscFEIntegrateBd()` 135320cf1dd8SToby Isaac @*/ 1354d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrate(PetscDS prob, PetscInt field, PetscInt Ne, PetscFEGeom *cgeom, const PetscScalar coefficients[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscScalar integral[]) 1355d71ae5a4SJacob Faibussowitsch { 13564bee2e38SMatthew G. Knepley PetscFE fe; 135720cf1dd8SToby Isaac 135820cf1dd8SToby Isaac PetscFunctionBegin; 13594bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 13609566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, field, (PetscObject *)&fe)); 13619566063dSJacob Faibussowitsch if (fe->ops->integrate) PetscCall((*fe->ops->integrate)(prob, field, Ne, cgeom, coefficients, probAux, coefficientsAux, integral)); 13623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 136320cf1dd8SToby Isaac } 136420cf1dd8SToby Isaac 136520cf1dd8SToby Isaac /*@C 1366afe6d6adSToby Isaac PetscFEIntegrateBd - Produce the integral for the given field for a chunk of elements by quadrature integration 1367afe6d6adSToby Isaac 1368*20f4b53cSBarry Smith Not Collective 1369afe6d6adSToby Isaac 1370afe6d6adSToby Isaac Input Parameters: 1371dce8aebaSBarry Smith + prob - The `PetscDS` specifying the discretizations and continuum functions 1372afe6d6adSToby Isaac . field - The field being integrated 1373afe6d6adSToby Isaac . obj_func - The function to be integrated 1374afe6d6adSToby Isaac . Ne - The number of elements in the chunk 1375afe6d6adSToby Isaac . fgeom - The face geometry for each face in the chunk 1376afe6d6adSToby Isaac . coefficients - The array of FEM basis coefficients for the elements 1377dce8aebaSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 1378afe6d6adSToby Isaac - coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 1379afe6d6adSToby Isaac 13807a7aea1fSJed Brown Output Parameter: 1381afe6d6adSToby Isaac . integral - the integral for this field 1382afe6d6adSToby Isaac 13832b99622eSMatthew G. Knepley Level: intermediate 1384afe6d6adSToby Isaac 1385dce8aebaSBarry Smith Developer Note: 1386dce8aebaSBarry Smith The function name begins with `PetscFE` and yet the first argument is `PetscDS` and it has no `PetscFE` arguments. 1387dce8aebaSBarry Smith 1388dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscDS`, `PetscFEIntegrateResidual()`, `PetscFEIntegrate()` 1389afe6d6adSToby Isaac @*/ 1390d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateBd(PetscDS prob, PetscInt field, void (*obj_func)(PetscInt, PetscInt, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscInt[], const PetscInt[], const PetscScalar[], const PetscScalar[], const PetscScalar[], PetscReal, const PetscReal[], const PetscReal[], PetscInt, const PetscScalar[], PetscScalar[]), PetscInt Ne, PetscFEGeom *geom, const PetscScalar coefficients[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscScalar integral[]) 1391d71ae5a4SJacob Faibussowitsch { 13924bee2e38SMatthew G. Knepley PetscFE fe; 1393afe6d6adSToby Isaac 1394afe6d6adSToby Isaac PetscFunctionBegin; 13954bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 13969566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, field, (PetscObject *)&fe)); 13979566063dSJacob Faibussowitsch if (fe->ops->integratebd) PetscCall((*fe->ops->integratebd)(prob, field, obj_func, Ne, geom, coefficients, probAux, coefficientsAux, integral)); 13983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1399afe6d6adSToby Isaac } 1400afe6d6adSToby Isaac 1401afe6d6adSToby Isaac /*@C 140220cf1dd8SToby Isaac PetscFEIntegrateResidual - Produce the element residual vector for a chunk of elements by quadrature integration 140320cf1dd8SToby Isaac 1404*20f4b53cSBarry Smith Not Collective 140520cf1dd8SToby Isaac 140620cf1dd8SToby Isaac Input Parameters: 1407*20f4b53cSBarry Smith + ds - The `PetscDS` specifying the discretizations and continuum functions 14086528b96dSMatthew G. Knepley . key - The (label+value, field) being integrated 140920cf1dd8SToby Isaac . Ne - The number of elements in the chunk 141020cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 141120cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 141220cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1413*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 141420cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 141520cf1dd8SToby Isaac - t - The time 141620cf1dd8SToby Isaac 14177a7aea1fSJed Brown Output Parameter: 141820cf1dd8SToby Isaac . elemVec - the element residual vectors from each element 141920cf1dd8SToby Isaac 14202b99622eSMatthew G. Knepley Level: intermediate 142120cf1dd8SToby Isaac 1422dce8aebaSBarry Smith Note: 1423dce8aebaSBarry Smith .vb 1424dce8aebaSBarry Smith Loop over batch of elements (e): 1425dce8aebaSBarry Smith Loop over quadrature points (q): 1426dce8aebaSBarry Smith Make u_q and gradU_q (loops over fields,Nb,Ncomp) and x_q 1427dce8aebaSBarry Smith Call f_0 and f_1 1428dce8aebaSBarry Smith Loop over element vector entries (f,fc --> i): 1429dce8aebaSBarry Smith elemVec[i] += \psi^{fc}_f(q) f0_{fc}(u, \nabla u) + \nabla\psi^{fc}_f(q) \cdot f1_{fc,df}(u, \nabla u) 1430dce8aebaSBarry Smith .ve 1431dce8aebaSBarry Smith 1432db781477SPatrick Sanan .seealso: `PetscFEIntegrateResidual()` 143320cf1dd8SToby Isaac @*/ 1434d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateResidual(PetscDS ds, PetscFormKey key, PetscInt Ne, PetscFEGeom *cgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 1435d71ae5a4SJacob Faibussowitsch { 14364bee2e38SMatthew G. Knepley PetscFE fe; 143720cf1dd8SToby Isaac 14386528b96dSMatthew G. Knepley PetscFunctionBeginHot; 14396528b96dSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 14409566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, key.field, (PetscObject *)&fe)); 14419566063dSJacob Faibussowitsch if (fe->ops->integrateresidual) PetscCall((*fe->ops->integrateresidual)(ds, key, Ne, cgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec)); 14423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 144320cf1dd8SToby Isaac } 144420cf1dd8SToby Isaac 144520cf1dd8SToby Isaac /*@C 144620cf1dd8SToby Isaac PetscFEIntegrateBdResidual - Produce the element residual vector for a chunk of elements by quadrature integration over a boundary 144720cf1dd8SToby Isaac 1448*20f4b53cSBarry Smith Not Collective 144920cf1dd8SToby Isaac 145020cf1dd8SToby Isaac Input Parameters: 1451*20f4b53cSBarry Smith + ds - The `PetscDS` specifying the discretizations and continuum functions 145245480ffeSMatthew G. Knepley . wf - The PetscWeakForm object holding the pointwise functions 145306d8a0d3SMatthew G. Knepley . key - The (label+value, field) being integrated 145420cf1dd8SToby Isaac . Ne - The number of elements in the chunk 145520cf1dd8SToby Isaac . fgeom - The face geometry for each cell in the chunk 145620cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 145720cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1458*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 145920cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 146020cf1dd8SToby Isaac - t - The time 146120cf1dd8SToby Isaac 14627a7aea1fSJed Brown Output Parameter: 146320cf1dd8SToby Isaac . elemVec - the element residual vectors from each element 146420cf1dd8SToby Isaac 14652b99622eSMatthew G. Knepley Level: intermediate 146620cf1dd8SToby Isaac 1467db781477SPatrick Sanan .seealso: `PetscFEIntegrateResidual()` 146820cf1dd8SToby Isaac @*/ 1469d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateBdResidual(PetscDS ds, PetscWeakForm wf, PetscFormKey key, PetscInt Ne, PetscFEGeom *fgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 1470d71ae5a4SJacob Faibussowitsch { 14714bee2e38SMatthew G. Knepley PetscFE fe; 147220cf1dd8SToby Isaac 147320cf1dd8SToby Isaac PetscFunctionBegin; 147406d8a0d3SMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 14759566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, key.field, (PetscObject *)&fe)); 14769566063dSJacob Faibussowitsch if (fe->ops->integratebdresidual) PetscCall((*fe->ops->integratebdresidual)(ds, wf, key, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec)); 14773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 147820cf1dd8SToby Isaac } 147920cf1dd8SToby Isaac 148020cf1dd8SToby Isaac /*@C 148127f02ce8SMatthew G. Knepley PetscFEIntegrateHybridResidual - Produce the element residual vector for a chunk of hybrid element faces by quadrature integration 148227f02ce8SMatthew G. Knepley 1483*20f4b53cSBarry Smith Not Collective 148427f02ce8SMatthew G. Knepley 148527f02ce8SMatthew G. Knepley Input Parameters: 1486*20f4b53cSBarry Smith + prob - The `PetscDS` specifying the discretizations and continuum functions 14876528b96dSMatthew G. Knepley . key - The (label+value, field) being integrated 1488c2b7495fSMatthew G. Knepley . s - The side of the cell being integrated, 0 for negative and 1 for positive 148927f02ce8SMatthew G. Knepley . Ne - The number of elements in the chunk 149027f02ce8SMatthew G. Knepley . fgeom - The face geometry for each cell in the chunk 149127f02ce8SMatthew G. Knepley . coefficients - The array of FEM basis coefficients for the elements 149227f02ce8SMatthew G. Knepley . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1493*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 149427f02ce8SMatthew G. Knepley . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 149527f02ce8SMatthew G. Knepley - t - The time 149627f02ce8SMatthew G. Knepley 149727f02ce8SMatthew G. Knepley Output Parameter 149827f02ce8SMatthew G. Knepley . elemVec - the element residual vectors from each element 149927f02ce8SMatthew G. Knepley 150027f02ce8SMatthew G. Knepley Level: developer 150127f02ce8SMatthew G. Knepley 1502db781477SPatrick Sanan .seealso: `PetscFEIntegrateResidual()` 150327f02ce8SMatthew G. Knepley @*/ 1504d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateHybridResidual(PetscDS prob, PetscFormKey key, PetscInt s, PetscInt Ne, PetscFEGeom *fgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 1505d71ae5a4SJacob Faibussowitsch { 150627f02ce8SMatthew G. Knepley PetscFE fe; 150727f02ce8SMatthew G. Knepley 150827f02ce8SMatthew G. Knepley PetscFunctionBegin; 150927f02ce8SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 15109566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, key.field, (PetscObject *)&fe)); 15119566063dSJacob Faibussowitsch if (fe->ops->integratehybridresidual) PetscCall((*fe->ops->integratehybridresidual)(prob, key, s, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec)); 15123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 151327f02ce8SMatthew G. Knepley } 151427f02ce8SMatthew G. Knepley 151527f02ce8SMatthew G. Knepley /*@C 151620cf1dd8SToby Isaac PetscFEIntegrateJacobian - Produce the element Jacobian for a chunk of elements by quadrature integration 151720cf1dd8SToby Isaac 1518*20f4b53cSBarry Smith Not Collective 151920cf1dd8SToby Isaac 152020cf1dd8SToby Isaac Input Parameters: 1521*20f4b53cSBarry Smith + ds - The `PetscDS` specifying the discretizations and continuum functions 152220cf1dd8SToby Isaac . jtype - The type of matrix pointwise functions that should be used 15236528b96dSMatthew G. Knepley . key - The (label+value, fieldI*Nf + fieldJ) being integrated 15245fedec97SMatthew G. Knepley . s - The side of the cell being integrated, 0 for negative and 1 for positive 152520cf1dd8SToby Isaac . Ne - The number of elements in the chunk 152620cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 152720cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 152820cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1529*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 153020cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 153120cf1dd8SToby Isaac . t - The time 153220cf1dd8SToby Isaac - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 153320cf1dd8SToby Isaac 15347a7aea1fSJed Brown Output Parameter: 153520cf1dd8SToby Isaac . elemMat - the element matrices for the Jacobian from each element 153620cf1dd8SToby Isaac 15372b99622eSMatthew G. Knepley Level: intermediate 153820cf1dd8SToby Isaac 1539dce8aebaSBarry Smith Note: 1540dce8aebaSBarry Smith .vb 1541dce8aebaSBarry Smith Loop over batch of elements (e): 1542dce8aebaSBarry Smith Loop over element matrix entries (f,fc,g,gc --> i,j): 1543dce8aebaSBarry Smith Loop over quadrature points (q): 1544dce8aebaSBarry Smith Make u_q and gradU_q (loops over fields,Nb,Ncomp) 1545dce8aebaSBarry Smith elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 1546dce8aebaSBarry Smith + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1547dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 1548dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1549dce8aebaSBarry Smith .ve 1550dce8aebaSBarry Smith 1551db781477SPatrick Sanan .seealso: `PetscFEIntegrateResidual()` 155220cf1dd8SToby Isaac @*/ 1553d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateJacobian(PetscDS ds, PetscFEJacobianType jtype, PetscFormKey key, PetscInt Ne, PetscFEGeom *cgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 1554d71ae5a4SJacob Faibussowitsch { 15554bee2e38SMatthew G. Knepley PetscFE fe; 15566528b96dSMatthew G. Knepley PetscInt Nf; 155720cf1dd8SToby Isaac 155820cf1dd8SToby Isaac PetscFunctionBegin; 15596528b96dSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 15609566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(ds, &Nf)); 15619566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, key.field / Nf, (PetscObject *)&fe)); 15629566063dSJacob Faibussowitsch if (fe->ops->integratejacobian) PetscCall((*fe->ops->integratejacobian)(ds, jtype, key, Ne, cgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat)); 15633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 156420cf1dd8SToby Isaac } 156520cf1dd8SToby Isaac 156620cf1dd8SToby Isaac /*@C 156720cf1dd8SToby Isaac PetscFEIntegrateBdJacobian - Produce the boundary element Jacobian for a chunk of elements by quadrature integration 156820cf1dd8SToby Isaac 1569*20f4b53cSBarry Smith Not Collective 157020cf1dd8SToby Isaac 157120cf1dd8SToby Isaac Input Parameters: 1572*20f4b53cSBarry Smith + ds - The `PetscDS` specifying the discretizations and continuum functions 157345480ffeSMatthew G. Knepley . wf - The PetscWeakForm holding the pointwise functions 157445480ffeSMatthew G. Knepley . key - The (label+value, fieldI*Nf + fieldJ) being integrated 157520cf1dd8SToby Isaac . Ne - The number of elements in the chunk 157620cf1dd8SToby Isaac . fgeom - The face geometry for each cell in the chunk 157720cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 157820cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1579*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 158020cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 158120cf1dd8SToby Isaac . t - The time 158220cf1dd8SToby Isaac - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 158320cf1dd8SToby Isaac 15847a7aea1fSJed Brown Output Parameter: 158520cf1dd8SToby Isaac . elemMat - the element matrices for the Jacobian from each element 158620cf1dd8SToby Isaac 15872b99622eSMatthew G. Knepley Level: intermediate 158820cf1dd8SToby Isaac 1589dce8aebaSBarry Smith Note: 1590dce8aebaSBarry Smith .vb 1591dce8aebaSBarry Smith Loop over batch of elements (e): 1592dce8aebaSBarry Smith Loop over element matrix entries (f,fc,g,gc --> i,j): 1593dce8aebaSBarry Smith Loop over quadrature points (q): 1594dce8aebaSBarry Smith Make u_q and gradU_q (loops over fields,Nb,Ncomp) 1595dce8aebaSBarry Smith elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 1596dce8aebaSBarry Smith + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1597dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 1598dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1599dce8aebaSBarry Smith .ve 1600dce8aebaSBarry Smith 1601db781477SPatrick Sanan .seealso: `PetscFEIntegrateJacobian()`, `PetscFEIntegrateResidual()` 160220cf1dd8SToby Isaac @*/ 1603d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateBdJacobian(PetscDS ds, PetscWeakForm wf, PetscFormKey key, PetscInt Ne, PetscFEGeom *fgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 1604d71ae5a4SJacob Faibussowitsch { 16054bee2e38SMatthew G. Knepley PetscFE fe; 160645480ffeSMatthew G. Knepley PetscInt Nf; 160720cf1dd8SToby Isaac 160820cf1dd8SToby Isaac PetscFunctionBegin; 160945480ffeSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 16109566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(ds, &Nf)); 16119566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, key.field / Nf, (PetscObject *)&fe)); 16129566063dSJacob Faibussowitsch if (fe->ops->integratebdjacobian) PetscCall((*fe->ops->integratebdjacobian)(ds, wf, key, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat)); 16133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161420cf1dd8SToby Isaac } 161520cf1dd8SToby Isaac 161627f02ce8SMatthew G. Knepley /*@C 161727f02ce8SMatthew G. Knepley PetscFEIntegrateHybridJacobian - Produce the boundary element Jacobian for a chunk of hybrid elements by quadrature integration 161827f02ce8SMatthew G. Knepley 1619*20f4b53cSBarry Smith Not Collective 162027f02ce8SMatthew G. Knepley 162127f02ce8SMatthew G. Knepley Input Parameters: 1622*20f4b53cSBarry Smith + ds - The `PetscDS` specifying the discretizations and continuum functions 162327f02ce8SMatthew G. Knepley . jtype - The type of matrix pointwise functions that should be used 162445480ffeSMatthew G. Knepley . key - The (label+value, fieldI*Nf + fieldJ) being integrated 16255fedec97SMatthew G. Knepley . s - The side of the cell being integrated, 0 for negative and 1 for positive 162627f02ce8SMatthew G. Knepley . Ne - The number of elements in the chunk 162727f02ce8SMatthew G. Knepley . fgeom - The face geometry for each cell in the chunk 162827f02ce8SMatthew G. Knepley . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 162927f02ce8SMatthew G. Knepley . coefficients_t - The array of FEM basis time derivative coefficients for the elements 1630*20f4b53cSBarry Smith . probAux - The `PetscDS` specifying the auxiliary discretizations 163127f02ce8SMatthew G. Knepley . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 163227f02ce8SMatthew G. Knepley . t - The time 163327f02ce8SMatthew G. Knepley - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 163427f02ce8SMatthew G. Knepley 163527f02ce8SMatthew G. Knepley Output Parameter 163627f02ce8SMatthew G. Knepley . elemMat - the element matrices for the Jacobian from each element 163727f02ce8SMatthew G. Knepley 163827f02ce8SMatthew G. Knepley Level: developer 163927f02ce8SMatthew G. Knepley 1640dce8aebaSBarry Smith Note: 1641dce8aebaSBarry Smith .vb 1642dce8aebaSBarry Smith Loop over batch of elements (e): 1643dce8aebaSBarry Smith Loop over element matrix entries (f,fc,g,gc --> i,j): 1644dce8aebaSBarry Smith Loop over quadrature points (q): 1645dce8aebaSBarry Smith Make u_q and gradU_q (loops over fields,Nb,Ncomp) 1646dce8aebaSBarry Smith elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 1647dce8aebaSBarry Smith + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1648dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 1649dce8aebaSBarry Smith + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 1650dce8aebaSBarry Smith .ve 1651dce8aebaSBarry Smith 1652db781477SPatrick Sanan .seealso: `PetscFEIntegrateJacobian()`, `PetscFEIntegrateResidual()` 165327f02ce8SMatthew G. Knepley @*/ 1654d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEIntegrateHybridJacobian(PetscDS ds, PetscFEJacobianType jtype, PetscFormKey key, PetscInt s, PetscInt Ne, PetscFEGeom *fgeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 1655d71ae5a4SJacob Faibussowitsch { 165627f02ce8SMatthew G. Knepley PetscFE fe; 165745480ffeSMatthew G. Knepley PetscInt Nf; 165827f02ce8SMatthew G. Knepley 165927f02ce8SMatthew G. Knepley PetscFunctionBegin; 166045480ffeSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 16619566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(ds, &Nf)); 16629566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, key.field / Nf, (PetscObject *)&fe)); 16639566063dSJacob Faibussowitsch if (fe->ops->integratehybridjacobian) PetscCall((*fe->ops->integratehybridjacobian)(ds, jtype, key, s, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat)); 16643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 166527f02ce8SMatthew G. Knepley } 166627f02ce8SMatthew G. Knepley 16672b99622eSMatthew G. Knepley /*@ 16682b99622eSMatthew G. Knepley PetscFEGetHeightSubspace - Get the subspace of this space for a mesh point of a given height 16692b99622eSMatthew G. Knepley 16702b99622eSMatthew G. Knepley Input Parameters: 16712b99622eSMatthew G. Knepley + fe - The finite element space 1672*20f4b53cSBarry Smith - height - The height of the `DMPLEX` point 16732b99622eSMatthew G. Knepley 16742b99622eSMatthew G. Knepley Output Parameter: 1675*20f4b53cSBarry Smith . subfe - The subspace of this `PetscFE` space 16762b99622eSMatthew G. Knepley 16772b99622eSMatthew G. Knepley Level: advanced 16782b99622eSMatthew G. Knepley 1679dce8aebaSBarry Smith Note: 1680dce8aebaSBarry Smith For example, if we want the subspace of this space for a face, we would choose height = 1. 1681dce8aebaSBarry Smith 1682db781477SPatrick Sanan .seealso: `PetscFECreateDefault()` 16832b99622eSMatthew G. Knepley @*/ 1684d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEGetHeightSubspace(PetscFE fe, PetscInt height, PetscFE *subfe) 1685d71ae5a4SJacob Faibussowitsch { 168620cf1dd8SToby Isaac PetscSpace P, subP; 168720cf1dd8SToby Isaac PetscDualSpace Q, subQ; 168820cf1dd8SToby Isaac PetscQuadrature subq; 168920cf1dd8SToby Isaac PetscFEType fetype; 169020cf1dd8SToby Isaac PetscInt dim, Nc; 169120cf1dd8SToby Isaac 169220cf1dd8SToby Isaac PetscFunctionBegin; 169320cf1dd8SToby Isaac PetscValidHeaderSpecific(fe, PETSCFE_CLASSID, 1); 169420cf1dd8SToby Isaac PetscValidPointer(subfe, 3); 169520cf1dd8SToby Isaac if (height == 0) { 169620cf1dd8SToby Isaac *subfe = fe; 16973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 169820cf1dd8SToby Isaac } 16999566063dSJacob Faibussowitsch PetscCall(PetscFEGetBasisSpace(fe, &P)); 17009566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &Q)); 17019566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fe, &Nc)); 17029566063dSJacob Faibussowitsch PetscCall(PetscFEGetFaceQuadrature(fe, &subq)); 17039566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDimension(Q, &dim)); 17041dca8a05SBarry Smith PetscCheck(height <= dim && height >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Asked for space at height %" PetscInt_FMT " for dimension %" PetscInt_FMT " space", height, dim); 17059566063dSJacob Faibussowitsch if (!fe->subspaces) PetscCall(PetscCalloc1(dim, &fe->subspaces)); 170620cf1dd8SToby Isaac if (height <= dim) { 170720cf1dd8SToby Isaac if (!fe->subspaces[height - 1]) { 1708665f567fSMatthew G. Knepley PetscFE sub = NULL; 17093f6b16c7SMatthew G. Knepley const char *name; 171020cf1dd8SToby Isaac 17119566063dSJacob Faibussowitsch PetscCall(PetscSpaceGetHeightSubspace(P, height, &subP)); 17129566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetHeightSubspace(Q, height, &subQ)); 1713665f567fSMatthew G. Knepley if (subQ) { 17149566063dSJacob Faibussowitsch PetscCall(PetscFECreate(PetscObjectComm((PetscObject)fe), &sub)); 17159566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)fe, &name)); 17169566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)sub, name)); 17179566063dSJacob Faibussowitsch PetscCall(PetscFEGetType(fe, &fetype)); 17189566063dSJacob Faibussowitsch PetscCall(PetscFESetType(sub, fetype)); 17199566063dSJacob Faibussowitsch PetscCall(PetscFESetBasisSpace(sub, subP)); 17209566063dSJacob Faibussowitsch PetscCall(PetscFESetDualSpace(sub, subQ)); 17219566063dSJacob Faibussowitsch PetscCall(PetscFESetNumComponents(sub, Nc)); 17229566063dSJacob Faibussowitsch PetscCall(PetscFESetUp(sub)); 17239566063dSJacob Faibussowitsch PetscCall(PetscFESetQuadrature(sub, subq)); 1724665f567fSMatthew G. Knepley } 172520cf1dd8SToby Isaac fe->subspaces[height - 1] = sub; 172620cf1dd8SToby Isaac } 172720cf1dd8SToby Isaac *subfe = fe->subspaces[height - 1]; 172820cf1dd8SToby Isaac } else { 172920cf1dd8SToby Isaac *subfe = NULL; 173020cf1dd8SToby Isaac } 17313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 173220cf1dd8SToby Isaac } 173320cf1dd8SToby Isaac 173420cf1dd8SToby Isaac /*@ 1735*20f4b53cSBarry Smith PetscFERefine - Create a "refined" `PetscFE` object that refines the reference cell into smaller copies. This is typically used 173620cf1dd8SToby Isaac to precondition a higher order method with a lower order method on a refined mesh having the same number of dofs (but more 173720cf1dd8SToby Isaac sparsity). It is also used to create an interpolation between regularly refined meshes. 173820cf1dd8SToby Isaac 1739*20f4b53cSBarry Smith Collective 174020cf1dd8SToby Isaac 174120cf1dd8SToby Isaac Input Parameter: 1742*20f4b53cSBarry Smith . fe - The initial `PetscFE` 174320cf1dd8SToby Isaac 174420cf1dd8SToby Isaac Output Parameter: 1745*20f4b53cSBarry Smith . feRef - The refined `PetscFE` 174620cf1dd8SToby Isaac 17472b99622eSMatthew G. Knepley Level: advanced 174820cf1dd8SToby Isaac 1749db781477SPatrick Sanan .seealso: `PetscFEType`, `PetscFECreate()`, `PetscFESetType()` 175020cf1dd8SToby Isaac @*/ 1751d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFERefine(PetscFE fe, PetscFE *feRef) 1752d71ae5a4SJacob Faibussowitsch { 175320cf1dd8SToby Isaac PetscSpace P, Pref; 175420cf1dd8SToby Isaac PetscDualSpace Q, Qref; 175520cf1dd8SToby Isaac DM K, Kref; 175620cf1dd8SToby Isaac PetscQuadrature q, qref; 175720cf1dd8SToby Isaac const PetscReal *v0, *jac; 175820cf1dd8SToby Isaac PetscInt numComp, numSubelements; 17591ac17e89SToby Isaac PetscInt cStart, cEnd, c; 17601ac17e89SToby Isaac PetscDualSpace *cellSpaces; 176120cf1dd8SToby Isaac 176220cf1dd8SToby Isaac PetscFunctionBegin; 17639566063dSJacob Faibussowitsch PetscCall(PetscFEGetBasisSpace(fe, &P)); 17649566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &Q)); 17659566063dSJacob Faibussowitsch PetscCall(PetscFEGetQuadrature(fe, &q)); 17669566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(Q, &K)); 176720cf1dd8SToby Isaac /* Create space */ 17689566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)P)); 176920cf1dd8SToby Isaac Pref = P; 177020cf1dd8SToby Isaac /* Create dual space */ 17719566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceDuplicate(Q, &Qref)); 17729566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetType(Qref, PETSCDUALSPACEREFINED)); 17739566063dSJacob Faibussowitsch PetscCall(DMRefine(K, PetscObjectComm((PetscObject)fe), &Kref)); 17749566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetDM(Qref, Kref)); 17759566063dSJacob Faibussowitsch PetscCall(DMPlexGetHeightStratum(Kref, 0, &cStart, &cEnd)); 17769566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(cEnd - cStart, &cellSpaces)); 17771ac17e89SToby Isaac /* TODO: fix for non-uniform refinement */ 17781ac17e89SToby Isaac for (c = 0; c < cEnd - cStart; c++) cellSpaces[c] = Q; 17799566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceRefinedSetCellSpaces(Qref, cellSpaces)); 17809566063dSJacob Faibussowitsch PetscCall(PetscFree(cellSpaces)); 17819566063dSJacob Faibussowitsch PetscCall(DMDestroy(&Kref)); 17829566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetUp(Qref)); 178320cf1dd8SToby Isaac /* Create element */ 17849566063dSJacob Faibussowitsch PetscCall(PetscFECreate(PetscObjectComm((PetscObject)fe), feRef)); 17859566063dSJacob Faibussowitsch PetscCall(PetscFESetType(*feRef, PETSCFECOMPOSITE)); 17869566063dSJacob Faibussowitsch PetscCall(PetscFESetBasisSpace(*feRef, Pref)); 17879566063dSJacob Faibussowitsch PetscCall(PetscFESetDualSpace(*feRef, Qref)); 17889566063dSJacob Faibussowitsch PetscCall(PetscFEGetNumComponents(fe, &numComp)); 17899566063dSJacob Faibussowitsch PetscCall(PetscFESetNumComponents(*feRef, numComp)); 17909566063dSJacob Faibussowitsch PetscCall(PetscFESetUp(*feRef)); 17919566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&Pref)); 17929566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceDestroy(&Qref)); 179320cf1dd8SToby Isaac /* Create quadrature */ 17949566063dSJacob Faibussowitsch PetscCall(PetscFECompositeGetMapping(*feRef, &numSubelements, &v0, &jac, NULL)); 17959566063dSJacob Faibussowitsch PetscCall(PetscQuadratureExpandComposite(q, numSubelements, v0, jac, &qref)); 17969566063dSJacob Faibussowitsch PetscCall(PetscFESetQuadrature(*feRef, qref)); 17979566063dSJacob Faibussowitsch PetscCall(PetscQuadratureDestroy(&qref)); 17983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 179920cf1dd8SToby Isaac } 180020cf1dd8SToby Isaac 1801d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscFESetDefaultName_Private(PetscFE fe) 1802d71ae5a4SJacob Faibussowitsch { 18037c48043bSMatthew G. Knepley PetscSpace P; 18047c48043bSMatthew G. Knepley PetscDualSpace Q; 18057c48043bSMatthew G. Knepley DM K; 18067c48043bSMatthew G. Knepley DMPolytopeType ct; 18077c48043bSMatthew G. Knepley PetscInt degree; 18087c48043bSMatthew G. Knepley char name[64]; 18097c48043bSMatthew G. Knepley 18107c48043bSMatthew G. Knepley PetscFunctionBegin; 18117c48043bSMatthew G. Knepley PetscCall(PetscFEGetBasisSpace(fe, &P)); 18127c48043bSMatthew G. Knepley PetscCall(PetscSpaceGetDegree(P, °ree, NULL)); 18137c48043bSMatthew G. Knepley PetscCall(PetscFEGetDualSpace(fe, &Q)); 18147c48043bSMatthew G. Knepley PetscCall(PetscDualSpaceGetDM(Q, &K)); 18157c48043bSMatthew G. Knepley PetscCall(DMPlexGetCellType(K, 0, &ct)); 18167c48043bSMatthew G. Knepley switch (ct) { 18177c48043bSMatthew G. Knepley case DM_POLYTOPE_SEGMENT: 18187c48043bSMatthew G. Knepley case DM_POLYTOPE_POINT_PRISM_TENSOR: 18197c48043bSMatthew G. Knepley case DM_POLYTOPE_QUADRILATERAL: 18207c48043bSMatthew G. Knepley case DM_POLYTOPE_SEG_PRISM_TENSOR: 18217c48043bSMatthew G. Knepley case DM_POLYTOPE_HEXAHEDRON: 1822d71ae5a4SJacob Faibussowitsch case DM_POLYTOPE_QUAD_PRISM_TENSOR: 1823d71ae5a4SJacob Faibussowitsch PetscCall(PetscSNPrintf(name, sizeof(name), "Q%" PetscInt_FMT, degree)); 1824d71ae5a4SJacob Faibussowitsch break; 18257c48043bSMatthew G. Knepley case DM_POLYTOPE_TRIANGLE: 1826d71ae5a4SJacob Faibussowitsch case DM_POLYTOPE_TETRAHEDRON: 1827d71ae5a4SJacob Faibussowitsch PetscCall(PetscSNPrintf(name, sizeof(name), "P%" PetscInt_FMT, degree)); 1828d71ae5a4SJacob Faibussowitsch break; 18297c48043bSMatthew G. Knepley case DM_POLYTOPE_TRI_PRISM: 1830d71ae5a4SJacob Faibussowitsch case DM_POLYTOPE_TRI_PRISM_TENSOR: 1831d71ae5a4SJacob Faibussowitsch PetscCall(PetscSNPrintf(name, sizeof(name), "P%" PetscInt_FMT "xQ%" PetscInt_FMT, degree, degree)); 1832d71ae5a4SJacob Faibussowitsch break; 1833d71ae5a4SJacob Faibussowitsch default: 1834d71ae5a4SJacob Faibussowitsch PetscCall(PetscSNPrintf(name, sizeof(name), "FE")); 18357c48043bSMatthew G. Knepley } 18367c48043bSMatthew G. Knepley PetscCall(PetscFESetName(fe, name)); 18373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 18387c48043bSMatthew G. Knepley } 18397c48043bSMatthew G. Knepley 1840d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscFECreateDefaultQuadrature_Private(PetscInt dim, DMPolytopeType ct, PetscInt qorder, PetscQuadrature *q, PetscQuadrature *fq) 1841d71ae5a4SJacob Faibussowitsch { 18427c48043bSMatthew G. Knepley const PetscInt quadPointsPerEdge = PetscMax(qorder + 1, 1); 18437c48043bSMatthew G. Knepley 18447c48043bSMatthew G. Knepley PetscFunctionBegin; 18457c48043bSMatthew G. Knepley switch (ct) { 18467c48043bSMatthew G. Knepley case DM_POLYTOPE_SEGMENT: 18477c48043bSMatthew G. Knepley case DM_POLYTOPE_POINT_PRISM_TENSOR: 18487c48043bSMatthew G. Knepley case DM_POLYTOPE_QUADRILATERAL: 18497c48043bSMatthew G. Knepley case DM_POLYTOPE_SEG_PRISM_TENSOR: 18507c48043bSMatthew G. Knepley case DM_POLYTOPE_HEXAHEDRON: 18517c48043bSMatthew G. Knepley case DM_POLYTOPE_QUAD_PRISM_TENSOR: 18527c48043bSMatthew G. Knepley PetscCall(PetscDTGaussTensorQuadrature(dim, 1, quadPointsPerEdge, -1.0, 1.0, q)); 18537c48043bSMatthew G. Knepley PetscCall(PetscDTGaussTensorQuadrature(dim - 1, 1, quadPointsPerEdge, -1.0, 1.0, fq)); 18547c48043bSMatthew G. Knepley break; 18557c48043bSMatthew G. Knepley case DM_POLYTOPE_TRIANGLE: 18567c48043bSMatthew G. Knepley case DM_POLYTOPE_TETRAHEDRON: 18578b6ef6a4SJed Brown PetscCall(PetscDTSimplexQuadrature(dim, 2 * qorder, PETSCDTSIMPLEXQUAD_DEFAULT, q)); 18588b6ef6a4SJed Brown PetscCall(PetscDTSimplexQuadrature(dim - 1, 2 * qorder, PETSCDTSIMPLEXQUAD_DEFAULT, fq)); 18597c48043bSMatthew G. Knepley break; 18607c48043bSMatthew G. Knepley case DM_POLYTOPE_TRI_PRISM: 18619371c9d4SSatish Balay case DM_POLYTOPE_TRI_PRISM_TENSOR: { 18627c48043bSMatthew G. Knepley PetscQuadrature q1, q2; 18637c48043bSMatthew G. Knepley 18648b6ef6a4SJed Brown // TODO: this should be able to use symmetric rules, but doing so causes tests to fail 18658b6ef6a4SJed Brown PetscCall(PetscDTSimplexQuadrature(2, 2 * qorder, PETSCDTSIMPLEXQUAD_CONIC, &q1)); 18667c48043bSMatthew G. Knepley PetscCall(PetscDTGaussTensorQuadrature(1, 1, quadPointsPerEdge, -1.0, 1.0, &q2)); 18677c48043bSMatthew G. Knepley PetscCall(PetscDTTensorQuadratureCreate(q1, q2, q)); 18687c48043bSMatthew G. Knepley PetscCall(PetscQuadratureDestroy(&q2)); 18698b6ef6a4SJed Brown *fq = q1; 18707c48043bSMatthew G. Knepley /* TODO Need separate quadratures for each face */ 18718b6ef6a4SJed Brown } break; 1872d71ae5a4SJacob Faibussowitsch default: 1873d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "No quadrature for celltype %s", DMPolytopeTypes[PetscMin(ct, DM_POLYTOPE_UNKNOWN)]); 18747c48043bSMatthew G. Knepley } 18753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 18767c48043bSMatthew G. Knepley } 18777c48043bSMatthew G. Knepley 18787c48043bSMatthew G. Knepley /*@ 1879dce8aebaSBarry Smith PetscFECreateFromSpaces - Create a `PetscFE` from the basis and dual spaces 18807c48043bSMatthew G. Knepley 18817c48043bSMatthew G. Knepley Collective 18827c48043bSMatthew G. Knepley 18837c48043bSMatthew G. Knepley Input Parameters: 18847c48043bSMatthew G. Knepley + P - The basis space 18857c48043bSMatthew G. Knepley . Q - The dual space 18867c48043bSMatthew G. Knepley . q - The cell quadrature 18877c48043bSMatthew G. Knepley - fq - The face quadrature 18887c48043bSMatthew G. Knepley 18897c48043bSMatthew G. Knepley Output Parameter: 1890*20f4b53cSBarry Smith . fem - The `PetscFE` object 18917c48043bSMatthew G. Knepley 18927c48043bSMatthew G. Knepley Level: beginner 18937c48043bSMatthew G. Knepley 1894dce8aebaSBarry Smith Note: 1895dce8aebaSBarry Smith The `PetscFE` takes ownership of these spaces by calling destroy on each. They should not be used after this call, and for borrowed references from `PetscFEGetSpace()` and the like, the caller must use `PetscObjectReference` before this call. 1896dce8aebaSBarry Smith 1897dce8aebaSBarry Smith .seealso: `PetscFE`, `PetscSpace`, `PetscDualSpace`, `PetscQuadrature`, 1898dce8aebaSBarry Smith `PetscFECreateLagrangeByCell()`, `PetscFECreateDefault()`, `PetscFECreateByCell()`, `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 18997c48043bSMatthew G. Knepley @*/ 1900d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateFromSpaces(PetscSpace P, PetscDualSpace Q, PetscQuadrature q, PetscQuadrature fq, PetscFE *fem) 1901d71ae5a4SJacob Faibussowitsch { 19027c48043bSMatthew G. Knepley PetscInt Nc; 19037c48043bSMatthew G. Knepley const char *prefix; 19047c48043bSMatthew G. Knepley 19057c48043bSMatthew G. Knepley PetscFunctionBegin; 19067c48043bSMatthew G. Knepley PetscCall(PetscFECreate(PetscObjectComm((PetscObject)P), fem)); 19077c48043bSMatthew G. Knepley PetscCall(PetscObjectGetOptionsPrefix((PetscObject)P, &prefix)); 19087c48043bSMatthew G. Knepley PetscCall(PetscObjectSetOptionsPrefix((PetscObject)*fem, prefix)); 19097c48043bSMatthew G. Knepley PetscCall(PetscFESetType(*fem, PETSCFEBASIC)); 19107c48043bSMatthew G. Knepley PetscCall(PetscFESetBasisSpace(*fem, P)); 19117c48043bSMatthew G. Knepley PetscCall(PetscFESetDualSpace(*fem, Q)); 19127c48043bSMatthew G. Knepley PetscCall(PetscSpaceGetNumComponents(P, &Nc)); 19137c48043bSMatthew G. Knepley PetscCall(PetscFESetNumComponents(*fem, Nc)); 19147c48043bSMatthew G. Knepley PetscCall(PetscFESetUp(*fem)); 19157c48043bSMatthew G. Knepley PetscCall(PetscSpaceDestroy(&P)); 19167c48043bSMatthew G. Knepley PetscCall(PetscDualSpaceDestroy(&Q)); 19177c48043bSMatthew G. Knepley PetscCall(PetscFESetQuadrature(*fem, q)); 19187c48043bSMatthew G. Knepley PetscCall(PetscFESetFaceQuadrature(*fem, fq)); 19197c48043bSMatthew G. Knepley PetscCall(PetscQuadratureDestroy(&q)); 19207c48043bSMatthew G. Knepley PetscCall(PetscQuadratureDestroy(&fq)); 19217c48043bSMatthew G. Knepley PetscCall(PetscFESetDefaultName_Private(*fem)); 19223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19237c48043bSMatthew G. Knepley } 19247c48043bSMatthew G. Knepley 1925d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscFECreate_Internal(MPI_Comm comm, PetscInt dim, PetscInt Nc, DMPolytopeType ct, const char prefix[], PetscInt degree, PetscInt qorder, PetscBool setFromOptions, PetscFE *fem) 1926d71ae5a4SJacob Faibussowitsch { 19272df84da0SMatthew G. Knepley DM K; 19282df84da0SMatthew G. Knepley PetscSpace P; 19292df84da0SMatthew G. Knepley PetscDualSpace Q; 19307c48043bSMatthew G. Knepley PetscQuadrature q, fq; 19312df84da0SMatthew G. Knepley PetscBool tensor; 19322df84da0SMatthew G. Knepley 19332df84da0SMatthew G. Knepley PetscFunctionBegin; 19342df84da0SMatthew G. Knepley if (prefix) PetscValidCharPointer(prefix, 5); 19352df84da0SMatthew G. Knepley PetscValidPointer(fem, 9); 19362df84da0SMatthew G. Knepley switch (ct) { 19372df84da0SMatthew G. Knepley case DM_POLYTOPE_SEGMENT: 19382df84da0SMatthew G. Knepley case DM_POLYTOPE_POINT_PRISM_TENSOR: 19392df84da0SMatthew G. Knepley case DM_POLYTOPE_QUADRILATERAL: 19402df84da0SMatthew G. Knepley case DM_POLYTOPE_SEG_PRISM_TENSOR: 19412df84da0SMatthew G. Knepley case DM_POLYTOPE_HEXAHEDRON: 1942d71ae5a4SJacob Faibussowitsch case DM_POLYTOPE_QUAD_PRISM_TENSOR: 1943d71ae5a4SJacob Faibussowitsch tensor = PETSC_TRUE; 1944d71ae5a4SJacob Faibussowitsch break; 1945d71ae5a4SJacob Faibussowitsch default: 1946d71ae5a4SJacob Faibussowitsch tensor = PETSC_FALSE; 19472df84da0SMatthew G. Knepley } 19482df84da0SMatthew G. Knepley /* Create space */ 19499566063dSJacob Faibussowitsch PetscCall(PetscSpaceCreate(comm, &P)); 19509566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetType(P, PETSCSPACEPOLYNOMIAL)); 19519566063dSJacob Faibussowitsch PetscCall(PetscObjectSetOptionsPrefix((PetscObject)P, prefix)); 19529566063dSJacob Faibussowitsch PetscCall(PetscSpacePolynomialSetTensor(P, tensor)); 19539566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumComponents(P, Nc)); 19549566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumVariables(P, dim)); 19552df84da0SMatthew G. Knepley if (degree >= 0) { 19569566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetDegree(P, degree, PETSC_DETERMINE)); 1957cfd33b42SLisandro Dalcin if (ct == DM_POLYTOPE_TRI_PRISM || ct == DM_POLYTOPE_TRI_PRISM_TENSOR) { 19582df84da0SMatthew G. Knepley PetscSpace Pend, Pside; 19592df84da0SMatthew G. Knepley 19609566063dSJacob Faibussowitsch PetscCall(PetscSpaceCreate(comm, &Pend)); 19619566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetType(Pend, PETSCSPACEPOLYNOMIAL)); 19629566063dSJacob Faibussowitsch PetscCall(PetscSpacePolynomialSetTensor(Pend, PETSC_FALSE)); 19639566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumComponents(Pend, Nc)); 19649566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumVariables(Pend, dim - 1)); 19659566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetDegree(Pend, degree, PETSC_DETERMINE)); 19669566063dSJacob Faibussowitsch PetscCall(PetscSpaceCreate(comm, &Pside)); 19679566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetType(Pside, PETSCSPACEPOLYNOMIAL)); 19689566063dSJacob Faibussowitsch PetscCall(PetscSpacePolynomialSetTensor(Pside, PETSC_FALSE)); 19699566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumComponents(Pside, 1)); 19709566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetNumVariables(Pside, 1)); 19719566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetDegree(Pside, degree, PETSC_DETERMINE)); 19729566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetType(P, PETSCSPACETENSOR)); 19739566063dSJacob Faibussowitsch PetscCall(PetscSpaceTensorSetNumSubspaces(P, 2)); 19749566063dSJacob Faibussowitsch PetscCall(PetscSpaceTensorSetSubspace(P, 0, Pend)); 19759566063dSJacob Faibussowitsch PetscCall(PetscSpaceTensorSetSubspace(P, 1, Pside)); 19769566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&Pend)); 19779566063dSJacob Faibussowitsch PetscCall(PetscSpaceDestroy(&Pside)); 19782df84da0SMatthew G. Knepley } 19792df84da0SMatthew G. Knepley } 19809566063dSJacob Faibussowitsch if (setFromOptions) PetscCall(PetscSpaceSetFromOptions(P)); 19819566063dSJacob Faibussowitsch PetscCall(PetscSpaceSetUp(P)); 19829566063dSJacob Faibussowitsch PetscCall(PetscSpaceGetDegree(P, °ree, NULL)); 19839566063dSJacob Faibussowitsch PetscCall(PetscSpacePolynomialGetTensor(P, &tensor)); 19849566063dSJacob Faibussowitsch PetscCall(PetscSpaceGetNumComponents(P, &Nc)); 19852df84da0SMatthew G. Knepley /* Create dual space */ 19869566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceCreate(comm, &Q)); 19879566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetType(Q, PETSCDUALSPACELAGRANGE)); 19889566063dSJacob Faibussowitsch PetscCall(PetscObjectSetOptionsPrefix((PetscObject)Q, prefix)); 19899566063dSJacob Faibussowitsch PetscCall(DMPlexCreateReferenceCell(PETSC_COMM_SELF, ct, &K)); 19909566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetDM(Q, K)); 19919566063dSJacob Faibussowitsch PetscCall(DMDestroy(&K)); 19929566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetNumComponents(Q, Nc)); 19939566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetOrder(Q, degree)); 19942df84da0SMatthew G. Knepley /* TODO For some reason, we need a tensor dualspace with wedges */ 19959566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceLagrangeSetTensor(Q, (tensor || (ct == DM_POLYTOPE_TRI_PRISM)) ? PETSC_TRUE : PETSC_FALSE)); 19969566063dSJacob Faibussowitsch if (setFromOptions) PetscCall(PetscDualSpaceSetFromOptions(Q)); 19979566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceSetUp(Q)); 19987c48043bSMatthew G. Knepley /* Create quadrature */ 19992df84da0SMatthew G. Knepley qorder = qorder >= 0 ? qorder : degree; 20002df84da0SMatthew G. Knepley if (setFromOptions) { 20017c48043bSMatthew G. Knepley PetscObjectOptionsBegin((PetscObject)P); 20029566063dSJacob Faibussowitsch PetscCall(PetscOptionsBoundedInt("-petscfe_default_quadrature_order", "Quadrature order is one less than quadrature points per edge", "PetscFECreateDefault", qorder, &qorder, NULL, 0)); 2003d0609cedSBarry Smith PetscOptionsEnd(); 20042df84da0SMatthew G. Knepley } 20057c48043bSMatthew G. Knepley PetscCall(PetscFECreateDefaultQuadrature_Private(dim, ct, qorder, &q, &fq)); 20067c48043bSMatthew G. Knepley /* Create finite element */ 20077c48043bSMatthew G. Knepley PetscCall(PetscFECreateFromSpaces(P, Q, q, fq, fem)); 20087c48043bSMatthew G. Knepley if (setFromOptions) PetscCall(PetscFESetFromOptions(*fem)); 20093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20102df84da0SMatthew G. Knepley } 20112df84da0SMatthew G. Knepley 201220cf1dd8SToby Isaac /*@C 2013*20f4b53cSBarry Smith PetscFECreateDefault - Create a `PetscFE` for basic FEM computation 201420cf1dd8SToby Isaac 2015d083f849SBarry Smith Collective 201620cf1dd8SToby Isaac 201720cf1dd8SToby Isaac Input Parameters: 20187be5e748SToby Isaac + comm - The MPI comm 201920cf1dd8SToby Isaac . dim - The spatial dimension 202020cf1dd8SToby Isaac . Nc - The number of components 202120cf1dd8SToby Isaac . isSimplex - Flag for simplex reference cell, otherwise its a tensor product 2022*20f4b53cSBarry Smith . prefix - The options prefix, or `NULL` 2023*20f4b53cSBarry Smith - qorder - The quadrature order or `PETSC_DETERMINE` to use `PetscSpace` polynomial degree 202420cf1dd8SToby Isaac 202520cf1dd8SToby Isaac Output Parameter: 2026*20f4b53cSBarry Smith . fem - The `PetscFE` object 202720cf1dd8SToby Isaac 2028dce8aebaSBarry Smith Level: beginner 2029dce8aebaSBarry Smith 2030e703855dSMatthew G. Knepley Note: 20318f2aacc6SMatthew G. Knepley Each subobject is SetFromOption() during creation, so that the object may be customized from the command line, using the prefix specified above. See the links below for the particular options available. 2032e703855dSMatthew G. Knepley 2033db781477SPatrick Sanan .seealso: `PetscFECreateLagrange()`, `PetscFECreateByCell()`, `PetscSpaceSetFromOptions()`, `PetscDualSpaceSetFromOptions()`, `PetscFESetFromOptions()`, `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 203420cf1dd8SToby Isaac @*/ 2035d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateDefault(MPI_Comm comm, PetscInt dim, PetscInt Nc, PetscBool isSimplex, const char prefix[], PetscInt qorder, PetscFE *fem) 2036d71ae5a4SJacob Faibussowitsch { 203720cf1dd8SToby Isaac PetscFunctionBegin; 20389566063dSJacob Faibussowitsch PetscCall(PetscFECreate_Internal(comm, dim, Nc, DMPolytopeTypeSimpleShape(dim, isSimplex), prefix, PETSC_DECIDE, qorder, PETSC_TRUE, fem)); 20393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 204020cf1dd8SToby Isaac } 20412df84da0SMatthew G. Knepley 20422df84da0SMatthew G. Knepley /*@C 2043*20f4b53cSBarry Smith PetscFECreateByCell - Create a `PetscFE` for basic FEM computation 20442df84da0SMatthew G. Knepley 20452df84da0SMatthew G. Knepley Collective 20462df84da0SMatthew G. Knepley 20472df84da0SMatthew G. Knepley Input Parameters: 20482df84da0SMatthew G. Knepley + comm - The MPI comm 20492df84da0SMatthew G. Knepley . dim - The spatial dimension 20502df84da0SMatthew G. Knepley . Nc - The number of components 20512df84da0SMatthew G. Knepley . ct - The celltype of the reference cell 2052*20f4b53cSBarry Smith . prefix - The options prefix, or `NULL` 2053*20f4b53cSBarry Smith - qorder - The quadrature order or `PETSC_DETERMINE` to use `PetscSpace` polynomial degree 20542df84da0SMatthew G. Knepley 20552df84da0SMatthew G. Knepley Output Parameter: 2056*20f4b53cSBarry Smith . fem - The `PetscFE` object 20572df84da0SMatthew G. Knepley 2058dce8aebaSBarry Smith Level: beginner 2059dce8aebaSBarry Smith 20602df84da0SMatthew G. Knepley Note: 20612df84da0SMatthew G. Knepley Each subobject is SetFromOption() during creation, so that the object may be customized from the command line, using the prefix specified above. See the links below for the particular options available. 20622df84da0SMatthew G. Knepley 2063db781477SPatrick Sanan .seealso: `PetscFECreateDefault()`, `PetscFECreateLagrange()`, `PetscSpaceSetFromOptions()`, `PetscDualSpaceSetFromOptions()`, `PetscFESetFromOptions()`, `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 20642df84da0SMatthew G. Knepley @*/ 2065d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateByCell(MPI_Comm comm, PetscInt dim, PetscInt Nc, DMPolytopeType ct, const char prefix[], PetscInt qorder, PetscFE *fem) 2066d71ae5a4SJacob Faibussowitsch { 20672df84da0SMatthew G. Knepley PetscFunctionBegin; 20689566063dSJacob Faibussowitsch PetscCall(PetscFECreate_Internal(comm, dim, Nc, ct, prefix, PETSC_DECIDE, qorder, PETSC_TRUE, fem)); 20693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 207020cf1dd8SToby Isaac } 20713f6b16c7SMatthew G. Knepley 2072e703855dSMatthew G. Knepley /*@ 2073*20f4b53cSBarry Smith PetscFECreateLagrange - Create a `PetscFE` for the basic Lagrange space of degree k 2074e703855dSMatthew G. Knepley 2075e703855dSMatthew G. Knepley Collective 2076e703855dSMatthew G. Knepley 2077e703855dSMatthew G. Knepley Input Parameters: 2078e703855dSMatthew G. Knepley + comm - The MPI comm 2079e703855dSMatthew G. Knepley . dim - The spatial dimension 2080e703855dSMatthew G. Knepley . Nc - The number of components 2081e703855dSMatthew G. Knepley . isSimplex - Flag for simplex reference cell, otherwise its a tensor product 2082e703855dSMatthew G. Knepley . k - The degree k of the space 2083*20f4b53cSBarry Smith - qorder - The quadrature order or `PETSC_DETERMINE` to use `PetscSpace` polynomial degree 2084e703855dSMatthew G. Knepley 2085e703855dSMatthew G. Knepley Output Parameter: 2086*20f4b53cSBarry Smith . fem - The `PetscFE` object 2087e703855dSMatthew G. Knepley 2088e703855dSMatthew G. Knepley Level: beginner 2089e703855dSMatthew G. Knepley 2090dce8aebaSBarry Smith Note: 2091e703855dSMatthew G. Knepley For simplices, this element is the space of maximum polynomial degree k, otherwise it is a tensor product of 1D polynomials, each with maximal degree k. 2092e703855dSMatthew G. Knepley 2093db781477SPatrick Sanan .seealso: `PetscFECreateLagrangeByCell()`, `PetscFECreateDefault()`, `PetscFECreateByCell()`, `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 2094e703855dSMatthew G. Knepley @*/ 2095d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateLagrange(MPI_Comm comm, PetscInt dim, PetscInt Nc, PetscBool isSimplex, PetscInt k, PetscInt qorder, PetscFE *fem) 2096d71ae5a4SJacob Faibussowitsch { 2097e703855dSMatthew G. Knepley PetscFunctionBegin; 20989566063dSJacob Faibussowitsch PetscCall(PetscFECreate_Internal(comm, dim, Nc, DMPolytopeTypeSimpleShape(dim, isSimplex), NULL, k, qorder, PETSC_FALSE, fem)); 20993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2100e703855dSMatthew G. Knepley } 21012df84da0SMatthew G. Knepley 21022df84da0SMatthew G. Knepley /*@ 2103*20f4b53cSBarry Smith PetscFECreateLagrangeByCell - Create a `PetscFE` for the basic Lagrange space of degree k 21042df84da0SMatthew G. Knepley 21052df84da0SMatthew G. Knepley Collective 21062df84da0SMatthew G. Knepley 21072df84da0SMatthew G. Knepley Input Parameters: 21082df84da0SMatthew G. Knepley + comm - The MPI comm 21092df84da0SMatthew G. Knepley . dim - The spatial dimension 21102df84da0SMatthew G. Knepley . Nc - The number of components 21112df84da0SMatthew G. Knepley . ct - The celltype of the reference cell 21122df84da0SMatthew G. Knepley . k - The degree k of the space 2113*20f4b53cSBarry Smith - qorder - The quadrature order or `PETSC_DETERMINE` to use `PetscSpace` polynomial degree 21142df84da0SMatthew G. Knepley 21152df84da0SMatthew G. Knepley Output Parameter: 2116*20f4b53cSBarry Smith . fem - The `PetscFE` object 21172df84da0SMatthew G. Knepley 21182df84da0SMatthew G. Knepley Level: beginner 21192df84da0SMatthew G. Knepley 2120dce8aebaSBarry Smith Note: 21212df84da0SMatthew G. Knepley For simplices, this element is the space of maximum polynomial degree k, otherwise it is a tensor product of 1D polynomials, each with maximal degree k. 21222df84da0SMatthew G. Knepley 2123db781477SPatrick Sanan .seealso: `PetscFECreateLagrange()`, `PetscFECreateDefault()`, `PetscFECreateByCell()`, `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 21242df84da0SMatthew G. Knepley @*/ 2125d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateLagrangeByCell(MPI_Comm comm, PetscInt dim, PetscInt Nc, DMPolytopeType ct, PetscInt k, PetscInt qorder, PetscFE *fem) 2126d71ae5a4SJacob Faibussowitsch { 21272df84da0SMatthew G. Knepley PetscFunctionBegin; 21289566063dSJacob Faibussowitsch PetscCall(PetscFECreate_Internal(comm, dim, Nc, ct, NULL, k, qorder, PETSC_FALSE, fem)); 21293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2130e703855dSMatthew G. Knepley } 2131e703855dSMatthew G. Knepley 21323f6b16c7SMatthew G. Knepley /*@C 2133*20f4b53cSBarry Smith PetscFESetName - Names the `PetscFE` and its subobjects 21343f6b16c7SMatthew G. Knepley 2135*20f4b53cSBarry Smith Not Collective 21363f6b16c7SMatthew G. Knepley 21373f6b16c7SMatthew G. Knepley Input Parameters: 2138*20f4b53cSBarry Smith + fe - The `PetscFE` 21393f6b16c7SMatthew G. Knepley - name - The name 21403f6b16c7SMatthew G. Knepley 21412b99622eSMatthew G. Knepley Level: intermediate 21423f6b16c7SMatthew G. Knepley 2143db781477SPatrick Sanan .seealso: `PetscFECreate()`, `PetscSpaceCreate()`, `PetscDualSpaceCreate()` 21443f6b16c7SMatthew G. Knepley @*/ 2145d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFESetName(PetscFE fe, const char name[]) 2146d71ae5a4SJacob Faibussowitsch { 21473f6b16c7SMatthew G. Knepley PetscSpace P; 21483f6b16c7SMatthew G. Knepley PetscDualSpace Q; 21493f6b16c7SMatthew G. Knepley 21503f6b16c7SMatthew G. Knepley PetscFunctionBegin; 21519566063dSJacob Faibussowitsch PetscCall(PetscFEGetBasisSpace(fe, &P)); 21529566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &Q)); 21539566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)fe, name)); 21549566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)P, name)); 21559566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)Q, name)); 21563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 21573f6b16c7SMatthew G. Knepley } 2158a8f1f9e5SMatthew G. Knepley 2159d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEEvaluateFieldJets_Internal(PetscDS ds, PetscInt Nf, PetscInt r, PetscInt q, PetscTabulation T[], PetscFEGeom *fegeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscScalar u[], PetscScalar u_x[], PetscScalar u_t[]) 2160d71ae5a4SJacob Faibussowitsch { 2161f9244615SMatthew G. Knepley PetscInt dOffset = 0, fOffset = 0, f, g; 2162a8f1f9e5SMatthew G. Knepley 2163a8f1f9e5SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 216426add6b9SMatthew G. Knepley PetscCheck(r < T[f]->Nr, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Replica number %" PetscInt_FMT " should be in [0, %" PetscInt_FMT ")", r, T[f]->Nr); 216526add6b9SMatthew G. Knepley PetscCheck(q < T[f]->Np, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Point number %" PetscInt_FMT " should be in [0, %" PetscInt_FMT ")", q, T[f]->Np); 2166a8f1f9e5SMatthew G. Knepley PetscFE fe; 2167f9244615SMatthew G. Knepley const PetscInt k = ds->jetDegree[f]; 2168ef0bb6c7SMatthew G. Knepley const PetscInt cdim = T[f]->cdim; 2169ef0bb6c7SMatthew G. Knepley const PetscInt Nq = T[f]->Np; 2170ef0bb6c7SMatthew G. Knepley const PetscInt Nbf = T[f]->Nb; 2171ef0bb6c7SMatthew G. Knepley const PetscInt Ncf = T[f]->Nc; 2172ef0bb6c7SMatthew G. Knepley const PetscReal *Bq = &T[f]->T[0][(r * Nq + q) * Nbf * Ncf]; 2173ef0bb6c7SMatthew G. Knepley const PetscReal *Dq = &T[f]->T[1][(r * Nq + q) * Nbf * Ncf * cdim]; 2174f9244615SMatthew G. Knepley const PetscReal *Hq = k > 1 ? &T[f]->T[2][(r * Nq + q) * Nbf * Ncf * cdim * cdim] : NULL; 2175f9244615SMatthew G. Knepley PetscInt hOffset = 0, b, c, d; 2176a8f1f9e5SMatthew G. Knepley 21779566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(ds, f, (PetscObject *)&fe)); 2178a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u[fOffset + c] = 0.0; 2179ef0bb6c7SMatthew G. Knepley for (d = 0; d < cdim * Ncf; ++d) u_x[fOffset * cdim + d] = 0.0; 2180a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2181a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2182a8f1f9e5SMatthew G. Knepley const PetscInt cidx = b * Ncf + c; 2183a8f1f9e5SMatthew G. Knepley 2184a8f1f9e5SMatthew G. Knepley u[fOffset + c] += Bq[cidx] * coefficients[dOffset + b]; 2185ef0bb6c7SMatthew G. Knepley for (d = 0; d < cdim; ++d) u_x[(fOffset + c) * cdim + d] += Dq[cidx * cdim + d] * coefficients[dOffset + b]; 2186a8f1f9e5SMatthew G. Knepley } 2187a8f1f9e5SMatthew G. Knepley } 2188f9244615SMatthew G. Knepley if (k > 1) { 2189f9244615SMatthew G. Knepley for (g = 0; g < Nf; ++g) hOffset += T[g]->Nc * cdim; 2190f9244615SMatthew G. Knepley for (d = 0; d < cdim * cdim * Ncf; ++d) u_x[hOffset + fOffset * cdim * cdim + d] = 0.0; 2191f9244615SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2192f9244615SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2193f9244615SMatthew G. Knepley const PetscInt cidx = b * Ncf + c; 2194f9244615SMatthew G. Knepley 2195f9244615SMatthew G. Knepley for (d = 0; d < cdim * cdim; ++d) u_x[hOffset + (fOffset + c) * cdim * cdim + d] += Hq[cidx * cdim * cdim + d] * coefficients[dOffset + b]; 2196f9244615SMatthew G. Knepley } 2197f9244615SMatthew G. Knepley } 21989566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardHessian(fe, fegeom, 1, &u_x[hOffset + fOffset * cdim * cdim])); 2199f9244615SMatthew G. Knepley } 22009566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, fegeom, 1, &u[fOffset])); 22019566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(fe, fegeom, 1, &u_x[fOffset * cdim])); 2202a8f1f9e5SMatthew G. Knepley if (u_t) { 2203a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u_t[fOffset + c] = 0.0; 2204a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2205a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2206a8f1f9e5SMatthew G. Knepley const PetscInt cidx = b * Ncf + c; 2207a8f1f9e5SMatthew G. Knepley 2208a8f1f9e5SMatthew G. Knepley u_t[fOffset + c] += Bq[cidx] * coefficients_t[dOffset + b]; 2209a8f1f9e5SMatthew G. Knepley } 2210a8f1f9e5SMatthew G. Knepley } 22119566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, fegeom, 1, &u_t[fOffset])); 2212a8f1f9e5SMatthew G. Knepley } 2213a8f1f9e5SMatthew G. Knepley fOffset += Ncf; 2214a8f1f9e5SMatthew G. Knepley dOffset += Nbf; 2215a8f1f9e5SMatthew G. Knepley } 22163ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 2217a8f1f9e5SMatthew G. Knepley } 2218a8f1f9e5SMatthew G. Knepley 2219d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEEvaluateFieldJets_Hybrid_Internal(PetscDS ds, PetscInt Nf, PetscInt r, PetscInt q, PetscTabulation T[], PetscFEGeom *fegeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscScalar u[], PetscScalar u_x[], PetscScalar u_t[]) 2220d71ae5a4SJacob Faibussowitsch { 22215fedec97SMatthew G. Knepley PetscInt dOffset = 0, fOffset = 0, f, g; 222227f02ce8SMatthew G. Knepley 22235fedec97SMatthew G. Knepley /* f is the field number in the DS, g is the field number in u[] */ 22245fedec97SMatthew G. Knepley for (f = 0, g = 0; f < Nf; ++f) { 22255fedec97SMatthew G. Knepley PetscFE fe = (PetscFE)ds->disc[f]; 22269ee2af8cSMatthew G. Knepley const PetscInt dEt = T[f]->cdim; 22279ee2af8cSMatthew G. Knepley const PetscInt dE = fegeom->dimEmbed; 2228665f567fSMatthew G. Knepley const PetscInt Nq = T[f]->Np; 2229665f567fSMatthew G. Knepley const PetscInt Nbf = T[f]->Nb; 2230665f567fSMatthew G. Knepley const PetscInt Ncf = T[f]->Nc; 2231665f567fSMatthew G. Knepley const PetscReal *Bq = &T[f]->T[0][(r * Nq + q) * Nbf * Ncf]; 22329ee2af8cSMatthew G. Knepley const PetscReal *Dq = &T[f]->T[1][(r * Nq + q) * Nbf * Ncf * dEt]; 22335fedec97SMatthew G. Knepley PetscBool isCohesive; 22345fedec97SMatthew G. Knepley PetscInt Ns, s; 22355fedec97SMatthew G. Knepley 22365fedec97SMatthew G. Knepley if (!T[f]) continue; 22379566063dSJacob Faibussowitsch PetscCall(PetscDSGetCohesive(ds, f, &isCohesive)); 22385fedec97SMatthew G. Knepley Ns = isCohesive ? 1 : 2; 22395fedec97SMatthew G. Knepley for (s = 0; s < Ns; ++s, ++g) { 224027f02ce8SMatthew G. Knepley PetscInt b, c, d; 224127f02ce8SMatthew G. Knepley 224227f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u[fOffset + c] = 0.0; 22439ee2af8cSMatthew G. Knepley for (d = 0; d < dE * Ncf; ++d) u_x[fOffset * dE + d] = 0.0; 224427f02ce8SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 224527f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 224627f02ce8SMatthew G. Knepley const PetscInt cidx = b * Ncf + c; 224727f02ce8SMatthew G. Knepley 224827f02ce8SMatthew G. Knepley u[fOffset + c] += Bq[cidx] * coefficients[dOffset + b]; 22499ee2af8cSMatthew G. Knepley for (d = 0; d < dEt; ++d) u_x[(fOffset + c) * dE + d] += Dq[cidx * dEt + d] * coefficients[dOffset + b]; 225027f02ce8SMatthew G. Knepley } 225127f02ce8SMatthew G. Knepley } 22529566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, fegeom, 1, &u[fOffset])); 22539566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(fe, fegeom, 1, &u_x[fOffset * dE])); 225427f02ce8SMatthew G. Knepley if (u_t) { 225527f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u_t[fOffset + c] = 0.0; 225627f02ce8SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 225727f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 225827f02ce8SMatthew G. Knepley const PetscInt cidx = b * Ncf + c; 225927f02ce8SMatthew G. Knepley 226027f02ce8SMatthew G. Knepley u_t[fOffset + c] += Bq[cidx] * coefficients_t[dOffset + b]; 226127f02ce8SMatthew G. Knepley } 226227f02ce8SMatthew G. Knepley } 22639566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, fegeom, 1, &u_t[fOffset])); 226427f02ce8SMatthew G. Knepley } 226527f02ce8SMatthew G. Knepley fOffset += Ncf; 226627f02ce8SMatthew G. Knepley dOffset += Nbf; 226727f02ce8SMatthew G. Knepley } 2268665f567fSMatthew G. Knepley } 22693ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 227027f02ce8SMatthew G. Knepley } 227127f02ce8SMatthew G. Knepley 2272d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEEvaluateFaceFields_Internal(PetscDS prob, PetscInt field, PetscInt faceLoc, const PetscScalar coefficients[], PetscScalar u[]) 2273d71ae5a4SJacob Faibussowitsch { 2274a8f1f9e5SMatthew G. Knepley PetscFE fe; 2275ef0bb6c7SMatthew G. Knepley PetscTabulation Tc; 2276ef0bb6c7SMatthew G. Knepley PetscInt b, c; 2277a8f1f9e5SMatthew G. Knepley 22783ba16761SJacob Faibussowitsch if (!prob) return PETSC_SUCCESS; 22799566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, field, (PetscObject *)&fe)); 22809566063dSJacob Faibussowitsch PetscCall(PetscFEGetFaceCentroidTabulation(fe, &Tc)); 2281ef0bb6c7SMatthew G. Knepley { 2282ef0bb6c7SMatthew G. Knepley const PetscReal *faceBasis = Tc->T[0]; 2283ef0bb6c7SMatthew G. Knepley const PetscInt Nb = Tc->Nb; 2284ef0bb6c7SMatthew G. Knepley const PetscInt Nc = Tc->Nc; 2285ef0bb6c7SMatthew G. Knepley 2286ad540459SPierre Jolivet for (c = 0; c < Nc; ++c) u[c] = 0.0; 2287a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2288ad540459SPierre Jolivet for (c = 0; c < Nc; ++c) u[c] += coefficients[b] * faceBasis[(faceLoc * Nb + b) * Nc + c]; 2289a8f1f9e5SMatthew G. Knepley } 2290ef0bb6c7SMatthew G. Knepley } 22913ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 2292a8f1f9e5SMatthew G. Knepley } 2293a8f1f9e5SMatthew G. Knepley 2294d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEUpdateElementVec_Internal(PetscFE fe, PetscTabulation T, PetscInt r, PetscScalar tmpBasis[], PetscScalar tmpBasisDer[], PetscInt e, PetscFEGeom *fegeom, PetscScalar f0[], PetscScalar f1[], PetscScalar elemVec[]) 2295d71ae5a4SJacob Faibussowitsch { 22966587ee25SMatthew G. Knepley PetscFEGeom pgeom; 2297bc3a64adSMatthew G. Knepley const PetscInt dEt = T->cdim; 2298bc3a64adSMatthew G. Knepley const PetscInt dE = fegeom->dimEmbed; 2299ef0bb6c7SMatthew G. Knepley const PetscInt Nq = T->Np; 2300ef0bb6c7SMatthew G. Knepley const PetscInt Nb = T->Nb; 2301ef0bb6c7SMatthew G. Knepley const PetscInt Nc = T->Nc; 2302ef0bb6c7SMatthew G. Knepley const PetscReal *basis = &T->T[0][r * Nq * Nb * Nc]; 2303bc3a64adSMatthew G. Knepley const PetscReal *basisDer = &T->T[1][r * Nq * Nb * Nc * dEt]; 2304a8f1f9e5SMatthew G. Knepley PetscInt q, b, c, d; 2305a8f1f9e5SMatthew G. Knepley 2306a8f1f9e5SMatthew G. Knepley for (q = 0; q < Nq; ++q) { 2307a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2308a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 2309a8f1f9e5SMatthew G. Knepley const PetscInt bcidx = b * Nc + c; 2310a8f1f9e5SMatthew G. Knepley 2311a8f1f9e5SMatthew G. Knepley tmpBasis[bcidx] = basis[q * Nb * Nc + bcidx]; 2312bc3a64adSMatthew G. Knepley for (d = 0; d < dEt; ++d) tmpBasisDer[bcidx * dE + d] = basisDer[q * Nb * Nc * dEt + bcidx * dEt + d]; 23139ee2af8cSMatthew G. Knepley for (d = dEt; d < dE; ++d) tmpBasisDer[bcidx * dE + d] = 0.0; 2314a8f1f9e5SMatthew G. Knepley } 2315a8f1f9e5SMatthew G. Knepley } 23169566063dSJacob Faibussowitsch PetscCall(PetscFEGeomGetCellPoint(fegeom, e, q, &pgeom)); 23179566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, &pgeom, Nb, tmpBasis)); 23189566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(fe, &pgeom, Nb, tmpBasisDer)); 2319a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2320a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 2321a8f1f9e5SMatthew G. Knepley const PetscInt bcidx = b * Nc + c; 2322a8f1f9e5SMatthew G. Knepley const PetscInt qcidx = q * Nc + c; 2323a8f1f9e5SMatthew G. Knepley 2324a8f1f9e5SMatthew G. Knepley elemVec[b] += tmpBasis[bcidx] * f0[qcidx]; 232527f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) elemVec[b] += tmpBasisDer[bcidx * dE + d] * f1[qcidx * dE + d]; 232627f02ce8SMatthew G. Knepley } 232727f02ce8SMatthew G. Knepley } 232827f02ce8SMatthew G. Knepley } 23293ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 233027f02ce8SMatthew G. Knepley } 233127f02ce8SMatthew G. Knepley 2332d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEUpdateElementVec_Hybrid_Internal(PetscFE fe, PetscTabulation T, PetscInt r, PetscInt s, PetscScalar tmpBasis[], PetscScalar tmpBasisDer[], PetscFEGeom *fegeom, PetscScalar f0[], PetscScalar f1[], PetscScalar elemVec[]) 2333d71ae5a4SJacob Faibussowitsch { 233427f02ce8SMatthew G. Knepley const PetscInt dE = T->cdim; 233527f02ce8SMatthew G. Knepley const PetscInt Nq = T->Np; 233627f02ce8SMatthew G. Knepley const PetscInt Nb = T->Nb; 233727f02ce8SMatthew G. Knepley const PetscInt Nc = T->Nc; 233827f02ce8SMatthew G. Knepley const PetscReal *basis = &T->T[0][r * Nq * Nb * Nc]; 233927f02ce8SMatthew G. Knepley const PetscReal *basisDer = &T->T[1][r * Nq * Nb * Nc * dE]; 2340c2b7495fSMatthew G. Knepley PetscInt q, b, c, d; 234127f02ce8SMatthew G. Knepley 234227f02ce8SMatthew G. Knepley for (q = 0; q < Nq; ++q) { 234327f02ce8SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 234427f02ce8SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 234527f02ce8SMatthew G. Knepley const PetscInt bcidx = b * Nc + c; 234627f02ce8SMatthew G. Knepley 234727f02ce8SMatthew G. Knepley tmpBasis[bcidx] = basis[q * Nb * Nc + bcidx]; 234827f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) tmpBasisDer[bcidx * dE + d] = basisDer[q * Nb * Nc * dE + bcidx * dE + d]; 234927f02ce8SMatthew G. Knepley } 235027f02ce8SMatthew G. Knepley } 23519566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(fe, fegeom, Nb, tmpBasis)); 23529566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(fe, fegeom, Nb, tmpBasisDer)); 235327f02ce8SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 235427f02ce8SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 235527f02ce8SMatthew G. Knepley const PetscInt bcidx = b * Nc + c; 2356c2b7495fSMatthew G. Knepley const PetscInt qcidx = q * Nc + c; 235727f02ce8SMatthew G. Knepley 235827f02ce8SMatthew G. Knepley elemVec[Nb * s + b] += tmpBasis[bcidx] * f0[qcidx]; 235927f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) elemVec[Nb * s + b] += tmpBasisDer[bcidx * dE + d] * f1[qcidx * dE + d]; 236027f02ce8SMatthew G. Knepley } 2361a8f1f9e5SMatthew G. Knepley } 2362a8f1f9e5SMatthew G. Knepley } 23633ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 2364a8f1f9e5SMatthew G. Knepley } 2365a8f1f9e5SMatthew G. Knepley 2366d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEUpdateElementMat_Internal(PetscFE feI, PetscFE feJ, PetscInt r, PetscInt q, PetscTabulation TI, PetscScalar tmpBasisI[], PetscScalar tmpBasisDerI[], PetscTabulation TJ, PetscScalar tmpBasisJ[], PetscScalar tmpBasisDerJ[], PetscFEGeom *fegeom, const PetscScalar g0[], const PetscScalar g1[], const PetscScalar g2[], const PetscScalar g3[], PetscInt eOffset, PetscInt totDim, PetscInt offsetI, PetscInt offsetJ, PetscScalar elemMat[]) 2367d71ae5a4SJacob Faibussowitsch { 236827f02ce8SMatthew G. Knepley const PetscInt dE = TI->cdim; 2369ef0bb6c7SMatthew G. Knepley const PetscInt NqI = TI->Np; 2370ef0bb6c7SMatthew G. Knepley const PetscInt NbI = TI->Nb; 2371ef0bb6c7SMatthew G. Knepley const PetscInt NcI = TI->Nc; 2372ef0bb6c7SMatthew G. Knepley const PetscReal *basisI = &TI->T[0][(r * NqI + q) * NbI * NcI]; 2373665f567fSMatthew G. Knepley const PetscReal *basisDerI = &TI->T[1][(r * NqI + q) * NbI * NcI * dE]; 2374ef0bb6c7SMatthew G. Knepley const PetscInt NqJ = TJ->Np; 2375ef0bb6c7SMatthew G. Knepley const PetscInt NbJ = TJ->Nb; 2376ef0bb6c7SMatthew G. Knepley const PetscInt NcJ = TJ->Nc; 2377ef0bb6c7SMatthew G. Knepley const PetscReal *basisJ = &TJ->T[0][(r * NqJ + q) * NbJ * NcJ]; 2378665f567fSMatthew G. Knepley const PetscReal *basisDerJ = &TJ->T[1][(r * NqJ + q) * NbJ * NcJ * dE]; 2379a8f1f9e5SMatthew G. Knepley PetscInt f, fc, g, gc, df, dg; 2380a8f1f9e5SMatthew G. Knepley 2381a8f1f9e5SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 2382a8f1f9e5SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 2383a8f1f9e5SMatthew G. Knepley const PetscInt fidx = f * NcI + fc; /* Test function basis index */ 2384a8f1f9e5SMatthew G. Knepley 2385a8f1f9e5SMatthew G. Knepley tmpBasisI[fidx] = basisI[fidx]; 238627f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) tmpBasisDerI[fidx * dE + df] = basisDerI[fidx * dE + df]; 2387a8f1f9e5SMatthew G. Knepley } 2388a8f1f9e5SMatthew G. Knepley } 23899566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(feI, fegeom, NbI, tmpBasisI)); 23909566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(feI, fegeom, NbI, tmpBasisDerI)); 2391a8f1f9e5SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 2392a8f1f9e5SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 2393a8f1f9e5SMatthew G. Knepley const PetscInt gidx = g * NcJ + gc; /* Trial function basis index */ 2394a8f1f9e5SMatthew G. Knepley 2395a8f1f9e5SMatthew G. Knepley tmpBasisJ[gidx] = basisJ[gidx]; 239627f02ce8SMatthew G. Knepley for (dg = 0; dg < dE; ++dg) tmpBasisDerJ[gidx * dE + dg] = basisDerJ[gidx * dE + dg]; 2397a8f1f9e5SMatthew G. Knepley } 2398a8f1f9e5SMatthew G. Knepley } 23999566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(feJ, fegeom, NbJ, tmpBasisJ)); 24009566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(feJ, fegeom, NbJ, tmpBasisDerJ)); 2401a8f1f9e5SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 2402a8f1f9e5SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 2403a8f1f9e5SMatthew G. Knepley const PetscInt fidx = f * NcI + fc; /* Test function basis index */ 2404a8f1f9e5SMatthew G. Knepley const PetscInt i = offsetI + f; /* Element matrix row */ 2405a8f1f9e5SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 2406a8f1f9e5SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 2407a8f1f9e5SMatthew G. Knepley const PetscInt gidx = g * NcJ + gc; /* Trial function basis index */ 2408a8f1f9e5SMatthew G. Knepley const PetscInt j = offsetJ + g; /* Element matrix column */ 2409a8f1f9e5SMatthew G. Knepley const PetscInt fOff = eOffset + i * totDim + j; 2410a8f1f9e5SMatthew G. Knepley 2411a8f1f9e5SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx] * g0[fc * NcJ + gc] * tmpBasisJ[gidx]; 241227f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) { 241327f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx] * g1[(fc * NcJ + gc) * dE + df] * tmpBasisDerJ[gidx * dE + df]; 241427f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx * dE + df] * g2[(fc * NcJ + gc) * dE + df] * tmpBasisJ[gidx]; 2415ad540459SPierre Jolivet for (dg = 0; dg < dE; ++dg) elemMat[fOff] += tmpBasisDerI[fidx * dE + df] * g3[((fc * NcJ + gc) * dE + df) * dE + dg] * tmpBasisDerJ[gidx * dE + dg]; 241627f02ce8SMatthew G. Knepley } 241727f02ce8SMatthew G. Knepley } 241827f02ce8SMatthew G. Knepley } 241927f02ce8SMatthew G. Knepley } 242027f02ce8SMatthew G. Knepley } 24213ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 242227f02ce8SMatthew G. Knepley } 242327f02ce8SMatthew G. Knepley 2424d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEUpdateElementMat_Hybrid_Internal(PetscFE feI, PetscBool isHybridI, PetscFE feJ, PetscBool isHybridJ, PetscInt r, PetscInt s, PetscInt q, PetscTabulation TI, PetscScalar tmpBasisI[], PetscScalar tmpBasisDerI[], PetscTabulation TJ, PetscScalar tmpBasisJ[], PetscScalar tmpBasisDerJ[], PetscFEGeom *fegeom, const PetscScalar g0[], const PetscScalar g1[], const PetscScalar g2[], const PetscScalar g3[], PetscInt eOffset, PetscInt totDim, PetscInt offsetI, PetscInt offsetJ, PetscScalar elemMat[]) 2425d71ae5a4SJacob Faibussowitsch { 2426665f567fSMatthew G. Knepley const PetscInt dE = TI->cdim; 2427665f567fSMatthew G. Knepley const PetscInt NqI = TI->Np; 2428665f567fSMatthew G. Knepley const PetscInt NbI = TI->Nb; 2429665f567fSMatthew G. Knepley const PetscInt NcI = TI->Nc; 2430665f567fSMatthew G. Knepley const PetscReal *basisI = &TI->T[0][(r * NqI + q) * NbI * NcI]; 2431665f567fSMatthew G. Knepley const PetscReal *basisDerI = &TI->T[1][(r * NqI + q) * NbI * NcI * dE]; 2432665f567fSMatthew G. Knepley const PetscInt NqJ = TJ->Np; 2433665f567fSMatthew G. Knepley const PetscInt NbJ = TJ->Nb; 2434665f567fSMatthew G. Knepley const PetscInt NcJ = TJ->Nc; 2435665f567fSMatthew G. Knepley const PetscReal *basisJ = &TJ->T[0][(r * NqJ + q) * NbJ * NcJ]; 2436665f567fSMatthew G. Knepley const PetscReal *basisDerJ = &TJ->T[1][(r * NqJ + q) * NbJ * NcJ * dE]; 24375fedec97SMatthew G. Knepley const PetscInt so = isHybridI ? 0 : s; 24385fedec97SMatthew G. Knepley const PetscInt to = isHybridJ ? 0 : s; 24395fedec97SMatthew G. Knepley PetscInt f, fc, g, gc, df, dg; 244027f02ce8SMatthew G. Knepley 244127f02ce8SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 244227f02ce8SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 244327f02ce8SMatthew G. Knepley const PetscInt fidx = f * NcI + fc; /* Test function basis index */ 244427f02ce8SMatthew G. Knepley 244527f02ce8SMatthew G. Knepley tmpBasisI[fidx] = basisI[fidx]; 2446665f567fSMatthew G. Knepley for (df = 0; df < dE; ++df) tmpBasisDerI[fidx * dE + df] = basisDerI[fidx * dE + df]; 244727f02ce8SMatthew G. Knepley } 244827f02ce8SMatthew G. Knepley } 24499566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(feI, fegeom, NbI, tmpBasisI)); 24509566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(feI, fegeom, NbI, tmpBasisDerI)); 245127f02ce8SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 245227f02ce8SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 245327f02ce8SMatthew G. Knepley const PetscInt gidx = g * NcJ + gc; /* Trial function basis index */ 245427f02ce8SMatthew G. Knepley 245527f02ce8SMatthew G. Knepley tmpBasisJ[gidx] = basisJ[gidx]; 2456665f567fSMatthew G. Knepley for (dg = 0; dg < dE; ++dg) tmpBasisDerJ[gidx * dE + dg] = basisDerJ[gidx * dE + dg]; 245727f02ce8SMatthew G. Knepley } 245827f02ce8SMatthew G. Knepley } 24599566063dSJacob Faibussowitsch PetscCall(PetscFEPushforward(feJ, fegeom, NbJ, tmpBasisJ)); 24609566063dSJacob Faibussowitsch PetscCall(PetscFEPushforwardGradient(feJ, fegeom, NbJ, tmpBasisDerJ)); 246127f02ce8SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 246227f02ce8SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 246327f02ce8SMatthew G. Knepley const PetscInt fidx = f * NcI + fc; /* Test function basis index */ 24645fedec97SMatthew G. Knepley const PetscInt i = offsetI + NbI * so + f; /* Element matrix row */ 246527f02ce8SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 246627f02ce8SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 246727f02ce8SMatthew G. Knepley const PetscInt gidx = g * NcJ + gc; /* Trial function basis index */ 24685fedec97SMatthew G. Knepley const PetscInt j = offsetJ + NbJ * to + g; /* Element matrix column */ 246927f02ce8SMatthew G. Knepley const PetscInt fOff = eOffset + i * totDim + j; 247027f02ce8SMatthew G. Knepley 24715fedec97SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx] * g0[fc * NcJ + gc] * tmpBasisJ[gidx]; 247227f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) { 24735fedec97SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx] * g1[(fc * NcJ + gc) * dE + df] * tmpBasisDerJ[gidx * dE + df]; 24745fedec97SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx * dE + df] * g2[(fc * NcJ + gc) * dE + df] * tmpBasisJ[gidx]; 2475ad540459SPierre Jolivet for (dg = 0; dg < dE; ++dg) elemMat[fOff] += tmpBasisDerI[fidx * dE + df] * g3[((fc * NcJ + gc) * dE + df) * dE + dg] * tmpBasisDerJ[gidx * dE + dg]; 2476a8f1f9e5SMatthew G. Knepley } 2477a8f1f9e5SMatthew G. Knepley } 2478a8f1f9e5SMatthew G. Knepley } 2479a8f1f9e5SMatthew G. Knepley } 2480a8f1f9e5SMatthew G. Knepley } 24813ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 2482a8f1f9e5SMatthew G. Knepley } 2483c9ba7969SMatthew G. Knepley 2484d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFECreateCellGeometry(PetscFE fe, PetscQuadrature quad, PetscFEGeom *cgeom) 2485d71ae5a4SJacob Faibussowitsch { 2486c9ba7969SMatthew G. Knepley PetscDualSpace dsp; 2487c9ba7969SMatthew G. Knepley DM dm; 2488c9ba7969SMatthew G. Knepley PetscQuadrature quadDef; 2489c9ba7969SMatthew G. Knepley PetscInt dim, cdim, Nq; 2490c9ba7969SMatthew G. Knepley 2491c9ba7969SMatthew G. Knepley PetscFunctionBegin; 24929566063dSJacob Faibussowitsch PetscCall(PetscFEGetDualSpace(fe, &dsp)); 24939566063dSJacob Faibussowitsch PetscCall(PetscDualSpaceGetDM(dsp, &dm)); 24949566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 24959566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDim(dm, &cdim)); 24969566063dSJacob Faibussowitsch PetscCall(PetscFEGetQuadrature(fe, &quadDef)); 2497c9ba7969SMatthew G. Knepley quad = quad ? quad : quadDef; 24989566063dSJacob Faibussowitsch PetscCall(PetscQuadratureGetData(quad, NULL, NULL, &Nq, NULL, NULL)); 24999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Nq * cdim, &cgeom->v)); 25009566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Nq * cdim * cdim, &cgeom->J)); 25019566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Nq * cdim * cdim, &cgeom->invJ)); 25029566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Nq, &cgeom->detJ)); 2503c9ba7969SMatthew G. Knepley cgeom->dim = dim; 2504c9ba7969SMatthew G. Knepley cgeom->dimEmbed = cdim; 2505c9ba7969SMatthew G. Knepley cgeom->numCells = 1; 2506c9ba7969SMatthew G. Knepley cgeom->numPoints = Nq; 25079566063dSJacob Faibussowitsch PetscCall(DMPlexComputeCellGeometryFEM(dm, 0, quad, cgeom->v, cgeom->J, cgeom->invJ, cgeom->detJ)); 25083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2509c9ba7969SMatthew G. Knepley } 2510c9ba7969SMatthew G. Knepley 2511d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscFEDestroyCellGeometry(PetscFE fe, PetscFEGeom *cgeom) 2512d71ae5a4SJacob Faibussowitsch { 2513c9ba7969SMatthew G. Knepley PetscFunctionBegin; 25149566063dSJacob Faibussowitsch PetscCall(PetscFree(cgeom->v)); 25159566063dSJacob Faibussowitsch PetscCall(PetscFree(cgeom->J)); 25169566063dSJacob Faibussowitsch PetscCall(PetscFree(cgeom->invJ)); 25179566063dSJacob Faibussowitsch PetscCall(PetscFree(cgeom->detJ)); 25183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2519c9ba7969SMatthew G. Knepley } 2520