120cf1dd8SToby Isaac /* Basis Jet Tabulation 220cf1dd8SToby Isaac 320cf1dd8SToby Isaac We would like to tabulate the nodal basis functions and derivatives at a set of points, usually quadrature points. We 420cf1dd8SToby Isaac follow here the derviation in http://www.math.ttu.edu/~kirby/papers/fiat-toms-2004.pdf. The nodal basis $\psi_i$ can 520cf1dd8SToby Isaac be expressed in terms of a prime basis $\phi_i$ which can be stably evaluated. In PETSc, we will use the Legendre basis 620cf1dd8SToby Isaac as a prime basis. 720cf1dd8SToby Isaac 820cf1dd8SToby Isaac \psi_i = \sum_k \alpha_{ki} \phi_k 920cf1dd8SToby Isaac 1020cf1dd8SToby Isaac Our nodal basis is defined in terms of the dual basis $n_j$ 1120cf1dd8SToby Isaac 1220cf1dd8SToby Isaac n_j \cdot \psi_i = \delta_{ji} 1320cf1dd8SToby Isaac 1420cf1dd8SToby Isaac and we may act on the first equation to obtain 1520cf1dd8SToby Isaac 1620cf1dd8SToby Isaac n_j \cdot \psi_i = \sum_k \alpha_{ki} n_j \cdot \phi_k 1720cf1dd8SToby Isaac \delta_{ji} = \sum_k \alpha_{ki} V_{jk} 1820cf1dd8SToby Isaac I = V \alpha 1920cf1dd8SToby Isaac 2020cf1dd8SToby Isaac so the coefficients of the nodal basis in the prime basis are 2120cf1dd8SToby Isaac 2220cf1dd8SToby Isaac \alpha = V^{-1} 2320cf1dd8SToby Isaac 2420cf1dd8SToby Isaac We will define the dual basis vectors $n_j$ using a quadrature rule. 2520cf1dd8SToby Isaac 2620cf1dd8SToby Isaac Right now, we will just use the polynomial spaces P^k. I know some elements use the space of symmetric polynomials 2720cf1dd8SToby Isaac (I think Nedelec), but we will neglect this for now. Constraints in the space, e.g. Arnold-Winther elements, can 2820cf1dd8SToby Isaac be implemented exactly as in FIAT using functionals $L_j$. 2920cf1dd8SToby Isaac 3020cf1dd8SToby Isaac I will have to count the degrees correctly for the Legendre product when we are on simplices. 3120cf1dd8SToby Isaac 3220cf1dd8SToby Isaac We will have three objects: 3320cf1dd8SToby Isaac - Space, P: this just need point evaluation I think 3420cf1dd8SToby Isaac - Dual Space, P'+K: This looks like a set of functionals that can act on members of P, each n is defined by a Q 3520cf1dd8SToby Isaac - FEM: This keeps {P, P', Q} 3620cf1dd8SToby Isaac */ 3720cf1dd8SToby Isaac #include <petsc/private/petscfeimpl.h> /*I "petscfe.h" I*/ 3820cf1dd8SToby Isaac #include <petscdmplex.h> 3920cf1dd8SToby Isaac 4020cf1dd8SToby Isaac PetscBool FEcite = PETSC_FALSE; 4120cf1dd8SToby Isaac const char FECitation[] = "@article{kirby2004,\n" 4220cf1dd8SToby Isaac " title = {Algorithm 839: FIAT, a New Paradigm for Computing Finite Element Basis Functions},\n" 4320cf1dd8SToby Isaac " journal = {ACM Transactions on Mathematical Software},\n" 4420cf1dd8SToby Isaac " author = {Robert C. Kirby},\n" 4520cf1dd8SToby Isaac " volume = {30},\n" 4620cf1dd8SToby Isaac " number = {4},\n" 4720cf1dd8SToby Isaac " pages = {502--516},\n" 4820cf1dd8SToby Isaac " doi = {10.1145/1039813.1039820},\n" 4920cf1dd8SToby Isaac " year = {2004}\n}\n"; 5020cf1dd8SToby Isaac 5120cf1dd8SToby Isaac PetscClassId PETSCFE_CLASSID = 0; 5220cf1dd8SToby Isaac 53ead873ccSMatthew G. Knepley PetscLogEvent PETSCFE_SetUp; 54ead873ccSMatthew G. Knepley 5520cf1dd8SToby Isaac PetscFunctionList PetscFEList = NULL; 5620cf1dd8SToby Isaac PetscBool PetscFERegisterAllCalled = PETSC_FALSE; 5720cf1dd8SToby Isaac 5820cf1dd8SToby Isaac /*@C 5920cf1dd8SToby Isaac PetscFERegister - Adds a new PetscFE implementation 6020cf1dd8SToby Isaac 6120cf1dd8SToby Isaac Not Collective 6220cf1dd8SToby Isaac 6320cf1dd8SToby Isaac Input Parameters: 6420cf1dd8SToby Isaac + name - The name of a new user-defined creation routine 6520cf1dd8SToby Isaac - create_func - The creation routine itself 6620cf1dd8SToby Isaac 6720cf1dd8SToby Isaac Notes: 6820cf1dd8SToby Isaac PetscFERegister() may be called multiple times to add several user-defined PetscFEs 6920cf1dd8SToby Isaac 7020cf1dd8SToby Isaac Sample usage: 7120cf1dd8SToby Isaac .vb 7220cf1dd8SToby Isaac PetscFERegister("my_fe", MyPetscFECreate); 7320cf1dd8SToby Isaac .ve 7420cf1dd8SToby Isaac 7520cf1dd8SToby Isaac Then, your PetscFE type can be chosen with the procedural interface via 7620cf1dd8SToby Isaac .vb 7720cf1dd8SToby Isaac PetscFECreate(MPI_Comm, PetscFE *); 7820cf1dd8SToby Isaac PetscFESetType(PetscFE, "my_fe"); 7920cf1dd8SToby Isaac .ve 8020cf1dd8SToby Isaac or at runtime via the option 8120cf1dd8SToby Isaac .vb 8220cf1dd8SToby Isaac -petscfe_type my_fe 8320cf1dd8SToby Isaac .ve 8420cf1dd8SToby Isaac 8520cf1dd8SToby Isaac Level: advanced 8620cf1dd8SToby Isaac 8720cf1dd8SToby Isaac .seealso: PetscFERegisterAll(), PetscFERegisterDestroy() 8820cf1dd8SToby Isaac 8920cf1dd8SToby Isaac @*/ 9020cf1dd8SToby Isaac PetscErrorCode PetscFERegister(const char sname[], PetscErrorCode (*function)(PetscFE)) 9120cf1dd8SToby Isaac { 9220cf1dd8SToby Isaac PetscErrorCode ierr; 9320cf1dd8SToby Isaac 9420cf1dd8SToby Isaac PetscFunctionBegin; 9520cf1dd8SToby Isaac ierr = PetscFunctionListAdd(&PetscFEList, sname, function);CHKERRQ(ierr); 9620cf1dd8SToby Isaac PetscFunctionReturn(0); 9720cf1dd8SToby Isaac } 9820cf1dd8SToby Isaac 9920cf1dd8SToby Isaac /*@C 10020cf1dd8SToby Isaac PetscFESetType - Builds a particular PetscFE 10120cf1dd8SToby Isaac 102d083f849SBarry Smith Collective on fem 10320cf1dd8SToby Isaac 10420cf1dd8SToby Isaac Input Parameters: 10520cf1dd8SToby Isaac + fem - The PetscFE object 10620cf1dd8SToby Isaac - name - The kind of FEM space 10720cf1dd8SToby Isaac 10820cf1dd8SToby Isaac Options Database Key: 10920cf1dd8SToby Isaac . -petscfe_type <type> - Sets the PetscFE type; use -help for a list of available types 11020cf1dd8SToby Isaac 11120cf1dd8SToby Isaac Level: intermediate 11220cf1dd8SToby Isaac 11320cf1dd8SToby Isaac .seealso: PetscFEGetType(), PetscFECreate() 11420cf1dd8SToby Isaac @*/ 11520cf1dd8SToby Isaac PetscErrorCode PetscFESetType(PetscFE fem, PetscFEType name) 11620cf1dd8SToby Isaac { 11720cf1dd8SToby Isaac PetscErrorCode (*r)(PetscFE); 11820cf1dd8SToby Isaac PetscBool match; 11920cf1dd8SToby Isaac PetscErrorCode ierr; 12020cf1dd8SToby Isaac 12120cf1dd8SToby Isaac PetscFunctionBegin; 12220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 12320cf1dd8SToby Isaac ierr = PetscObjectTypeCompare((PetscObject) fem, name, &match);CHKERRQ(ierr); 12420cf1dd8SToby Isaac if (match) PetscFunctionReturn(0); 12520cf1dd8SToby Isaac 12620cf1dd8SToby Isaac if (!PetscFERegisterAllCalled) {ierr = PetscFERegisterAll();CHKERRQ(ierr);} 12720cf1dd8SToby Isaac ierr = PetscFunctionListFind(PetscFEList, name, &r);CHKERRQ(ierr); 12820cf1dd8SToby Isaac if (!r) SETERRQ1(PetscObjectComm((PetscObject) fem), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown PetscFE type: %s", name); 12920cf1dd8SToby Isaac 13020cf1dd8SToby Isaac if (fem->ops->destroy) { 13120cf1dd8SToby Isaac ierr = (*fem->ops->destroy)(fem);CHKERRQ(ierr); 13220cf1dd8SToby Isaac fem->ops->destroy = NULL; 13320cf1dd8SToby Isaac } 13420cf1dd8SToby Isaac ierr = (*r)(fem);CHKERRQ(ierr); 13520cf1dd8SToby Isaac ierr = PetscObjectChangeTypeName((PetscObject) fem, name);CHKERRQ(ierr); 13620cf1dd8SToby Isaac PetscFunctionReturn(0); 13720cf1dd8SToby Isaac } 13820cf1dd8SToby Isaac 13920cf1dd8SToby Isaac /*@C 14020cf1dd8SToby Isaac PetscFEGetType - Gets the PetscFE type name (as a string) from the object. 14120cf1dd8SToby Isaac 14220cf1dd8SToby Isaac Not Collective 14320cf1dd8SToby Isaac 14420cf1dd8SToby Isaac Input Parameter: 14520cf1dd8SToby Isaac . fem - The PetscFE 14620cf1dd8SToby Isaac 14720cf1dd8SToby Isaac Output Parameter: 14820cf1dd8SToby Isaac . name - The PetscFE type name 14920cf1dd8SToby Isaac 15020cf1dd8SToby Isaac Level: intermediate 15120cf1dd8SToby Isaac 15220cf1dd8SToby Isaac .seealso: PetscFESetType(), PetscFECreate() 15320cf1dd8SToby Isaac @*/ 15420cf1dd8SToby Isaac PetscErrorCode PetscFEGetType(PetscFE fem, PetscFEType *name) 15520cf1dd8SToby Isaac { 15620cf1dd8SToby Isaac PetscErrorCode ierr; 15720cf1dd8SToby Isaac 15820cf1dd8SToby Isaac PetscFunctionBegin; 15920cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 16020cf1dd8SToby Isaac PetscValidPointer(name, 2); 16120cf1dd8SToby Isaac if (!PetscFERegisterAllCalled) { 16220cf1dd8SToby Isaac ierr = PetscFERegisterAll();CHKERRQ(ierr); 16320cf1dd8SToby Isaac } 16420cf1dd8SToby Isaac *name = ((PetscObject) fem)->type_name; 16520cf1dd8SToby Isaac PetscFunctionReturn(0); 16620cf1dd8SToby Isaac } 16720cf1dd8SToby Isaac 16820cf1dd8SToby Isaac /*@C 169fe2efc57SMark PetscFEViewFromOptions - View from Options 170fe2efc57SMark 171fe2efc57SMark Collective on PetscFE 172fe2efc57SMark 173fe2efc57SMark Input Parameters: 174fe2efc57SMark + A - the PetscFE object 175fe2efc57SMark . obj - Optional object 176fe2efc57SMark - name - command line option 177fe2efc57SMark 178fe2efc57SMark Level: intermediate 179fe2efc57SMark .seealso: PetscFE(), PetscFEView(), PetscObjectViewFromOptions(), PetscFECreate() 180fe2efc57SMark @*/ 181fe2efc57SMark PetscErrorCode PetscFEViewFromOptions(PetscFE A,PetscObject obj,const char name[]) 182fe2efc57SMark { 183fe2efc57SMark PetscErrorCode ierr; 184fe2efc57SMark 185fe2efc57SMark PetscFunctionBegin; 186fe2efc57SMark PetscValidHeaderSpecific(A,PETSCFE_CLASSID,1); 187fe2efc57SMark ierr = PetscObjectViewFromOptions((PetscObject)A,obj,name);CHKERRQ(ierr); 188fe2efc57SMark PetscFunctionReturn(0); 189fe2efc57SMark } 190fe2efc57SMark 191fe2efc57SMark /*@C 19220cf1dd8SToby Isaac PetscFEView - Views a PetscFE 19320cf1dd8SToby Isaac 194d083f849SBarry Smith Collective on fem 19520cf1dd8SToby Isaac 19620cf1dd8SToby Isaac Input Parameter: 19720cf1dd8SToby Isaac + fem - the PetscFE object to view 198d9bac1caSLisandro Dalcin - viewer - the viewer 19920cf1dd8SToby Isaac 2002b99622eSMatthew G. Knepley Level: beginner 20120cf1dd8SToby Isaac 20220cf1dd8SToby Isaac .seealso PetscFEDestroy() 20320cf1dd8SToby Isaac @*/ 204d9bac1caSLisandro Dalcin PetscErrorCode PetscFEView(PetscFE fem, PetscViewer viewer) 20520cf1dd8SToby Isaac { 206d9bac1caSLisandro Dalcin PetscBool iascii; 20720cf1dd8SToby Isaac PetscErrorCode ierr; 20820cf1dd8SToby Isaac 20920cf1dd8SToby Isaac PetscFunctionBegin; 21020cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 211d9bac1caSLisandro Dalcin if (viewer) PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 212d9bac1caSLisandro Dalcin if (!viewer) {ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject) fem), &viewer);CHKERRQ(ierr);} 213d9bac1caSLisandro Dalcin ierr = PetscObjectPrintClassNamePrefixType((PetscObject)fem, viewer);CHKERRQ(ierr); 214d9bac1caSLisandro Dalcin ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii);CHKERRQ(ierr); 215d9bac1caSLisandro Dalcin if (fem->ops->view) {ierr = (*fem->ops->view)(fem, viewer);CHKERRQ(ierr);} 21620cf1dd8SToby Isaac PetscFunctionReturn(0); 21720cf1dd8SToby Isaac } 21820cf1dd8SToby Isaac 21920cf1dd8SToby Isaac /*@ 22020cf1dd8SToby Isaac PetscFESetFromOptions - sets parameters in a PetscFE from the options database 22120cf1dd8SToby Isaac 222d083f849SBarry Smith Collective on fem 22320cf1dd8SToby Isaac 22420cf1dd8SToby Isaac Input Parameter: 22520cf1dd8SToby Isaac . fem - the PetscFE object to set options for 22620cf1dd8SToby Isaac 22720cf1dd8SToby Isaac Options Database: 228a2b725a8SWilliam Gropp + -petscfe_num_blocks - the number of cell blocks to integrate concurrently 229a2b725a8SWilliam Gropp - -petscfe_num_batches - the number of cell batches to integrate serially 23020cf1dd8SToby Isaac 2312b99622eSMatthew G. Knepley Level: intermediate 23220cf1dd8SToby Isaac 23320cf1dd8SToby Isaac .seealso PetscFEView() 23420cf1dd8SToby Isaac @*/ 23520cf1dd8SToby Isaac PetscErrorCode PetscFESetFromOptions(PetscFE fem) 23620cf1dd8SToby Isaac { 23720cf1dd8SToby Isaac const char *defaultType; 23820cf1dd8SToby Isaac char name[256]; 23920cf1dd8SToby Isaac PetscBool flg; 24020cf1dd8SToby Isaac PetscErrorCode ierr; 24120cf1dd8SToby Isaac 24220cf1dd8SToby Isaac PetscFunctionBegin; 24320cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 24420cf1dd8SToby Isaac if (!((PetscObject) fem)->type_name) { 24520cf1dd8SToby Isaac defaultType = PETSCFEBASIC; 24620cf1dd8SToby Isaac } else { 24720cf1dd8SToby Isaac defaultType = ((PetscObject) fem)->type_name; 24820cf1dd8SToby Isaac } 24920cf1dd8SToby Isaac if (!PetscFERegisterAllCalled) {ierr = PetscFERegisterAll();CHKERRQ(ierr);} 25020cf1dd8SToby Isaac 25120cf1dd8SToby Isaac ierr = PetscObjectOptionsBegin((PetscObject) fem);CHKERRQ(ierr); 25220cf1dd8SToby Isaac ierr = PetscOptionsFList("-petscfe_type", "Finite element space", "PetscFESetType", PetscFEList, defaultType, name, 256, &flg);CHKERRQ(ierr); 25320cf1dd8SToby Isaac if (flg) { 25420cf1dd8SToby Isaac ierr = PetscFESetType(fem, name);CHKERRQ(ierr); 25520cf1dd8SToby Isaac } else if (!((PetscObject) fem)->type_name) { 25620cf1dd8SToby Isaac ierr = PetscFESetType(fem, defaultType);CHKERRQ(ierr); 25720cf1dd8SToby Isaac } 2585a856986SBarry Smith ierr = PetscOptionsBoundedInt("-petscfe_num_blocks", "The number of cell blocks to integrate concurrently", "PetscSpaceSetTileSizes", fem->numBlocks, &fem->numBlocks, NULL,1);CHKERRQ(ierr); 2595a856986SBarry Smith ierr = PetscOptionsBoundedInt("-petscfe_num_batches", "The number of cell batches to integrate serially", "PetscSpaceSetTileSizes", fem->numBatches, &fem->numBatches, NULL,1);CHKERRQ(ierr); 26020cf1dd8SToby Isaac if (fem->ops->setfromoptions) { 26120cf1dd8SToby Isaac ierr = (*fem->ops->setfromoptions)(PetscOptionsObject,fem);CHKERRQ(ierr); 26220cf1dd8SToby Isaac } 26320cf1dd8SToby Isaac /* process any options handlers added with PetscObjectAddOptionsHandler() */ 26420cf1dd8SToby Isaac ierr = PetscObjectProcessOptionsHandlers(PetscOptionsObject,(PetscObject) fem);CHKERRQ(ierr); 26520cf1dd8SToby Isaac ierr = PetscOptionsEnd();CHKERRQ(ierr); 26620cf1dd8SToby Isaac ierr = PetscFEViewFromOptions(fem, NULL, "-petscfe_view");CHKERRQ(ierr); 26720cf1dd8SToby Isaac PetscFunctionReturn(0); 26820cf1dd8SToby Isaac } 26920cf1dd8SToby Isaac 27020cf1dd8SToby Isaac /*@C 27120cf1dd8SToby Isaac PetscFESetUp - Construct data structures for the PetscFE 27220cf1dd8SToby Isaac 273d083f849SBarry Smith Collective on fem 27420cf1dd8SToby Isaac 27520cf1dd8SToby Isaac Input Parameter: 27620cf1dd8SToby Isaac . fem - the PetscFE object to setup 27720cf1dd8SToby Isaac 2782b99622eSMatthew G. Knepley Level: intermediate 27920cf1dd8SToby Isaac 28020cf1dd8SToby Isaac .seealso PetscFEView(), PetscFEDestroy() 28120cf1dd8SToby Isaac @*/ 28220cf1dd8SToby Isaac PetscErrorCode PetscFESetUp(PetscFE fem) 28320cf1dd8SToby Isaac { 28420cf1dd8SToby Isaac PetscErrorCode ierr; 28520cf1dd8SToby Isaac 28620cf1dd8SToby Isaac PetscFunctionBegin; 28720cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 28820cf1dd8SToby Isaac if (fem->setupcalled) PetscFunctionReturn(0); 289ead873ccSMatthew G. Knepley ierr = PetscLogEventBegin(PETSCFE_SetUp, fem, 0, 0, 0);CHKERRQ(ierr); 29020cf1dd8SToby Isaac fem->setupcalled = PETSC_TRUE; 29120cf1dd8SToby Isaac if (fem->ops->setup) {ierr = (*fem->ops->setup)(fem);CHKERRQ(ierr);} 292ead873ccSMatthew G. Knepley ierr = PetscLogEventEnd(PETSCFE_SetUp, fem, 0, 0, 0);CHKERRQ(ierr); 29320cf1dd8SToby Isaac PetscFunctionReturn(0); 29420cf1dd8SToby Isaac } 29520cf1dd8SToby Isaac 29620cf1dd8SToby Isaac /*@ 29720cf1dd8SToby Isaac PetscFEDestroy - Destroys a PetscFE object 29820cf1dd8SToby Isaac 299d083f849SBarry Smith Collective on fem 30020cf1dd8SToby Isaac 30120cf1dd8SToby Isaac Input Parameter: 30220cf1dd8SToby Isaac . fem - the PetscFE object to destroy 30320cf1dd8SToby Isaac 3042b99622eSMatthew G. Knepley Level: beginner 30520cf1dd8SToby Isaac 30620cf1dd8SToby Isaac .seealso PetscFEView() 30720cf1dd8SToby Isaac @*/ 30820cf1dd8SToby Isaac PetscErrorCode PetscFEDestroy(PetscFE *fem) 30920cf1dd8SToby Isaac { 31020cf1dd8SToby Isaac PetscErrorCode ierr; 31120cf1dd8SToby Isaac 31220cf1dd8SToby Isaac PetscFunctionBegin; 31320cf1dd8SToby Isaac if (!*fem) PetscFunctionReturn(0); 31420cf1dd8SToby Isaac PetscValidHeaderSpecific((*fem), PETSCFE_CLASSID, 1); 31520cf1dd8SToby Isaac 316ea78f98cSLisandro Dalcin if (--((PetscObject)(*fem))->refct > 0) {*fem = NULL; PetscFunctionReturn(0);} 31720cf1dd8SToby Isaac ((PetscObject) (*fem))->refct = 0; 31820cf1dd8SToby Isaac 31920cf1dd8SToby Isaac if ((*fem)->subspaces) { 32020cf1dd8SToby Isaac PetscInt dim, d; 32120cf1dd8SToby Isaac 32220cf1dd8SToby Isaac ierr = PetscDualSpaceGetDimension((*fem)->dualSpace, &dim);CHKERRQ(ierr); 32320cf1dd8SToby Isaac for (d = 0; d < dim; ++d) {ierr = PetscFEDestroy(&(*fem)->subspaces[d]);CHKERRQ(ierr);} 32420cf1dd8SToby Isaac } 32520cf1dd8SToby Isaac ierr = PetscFree((*fem)->subspaces);CHKERRQ(ierr); 32620cf1dd8SToby Isaac ierr = PetscFree((*fem)->invV);CHKERRQ(ierr); 327ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&(*fem)->T);CHKERRQ(ierr); 328ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&(*fem)->Tf);CHKERRQ(ierr); 329ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&(*fem)->Tc);CHKERRQ(ierr); 33020cf1dd8SToby Isaac ierr = PetscSpaceDestroy(&(*fem)->basisSpace);CHKERRQ(ierr); 33120cf1dd8SToby Isaac ierr = PetscDualSpaceDestroy(&(*fem)->dualSpace);CHKERRQ(ierr); 33220cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&(*fem)->quadrature);CHKERRQ(ierr); 33320cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&(*fem)->faceQuadrature);CHKERRQ(ierr); 33420cf1dd8SToby Isaac 33520cf1dd8SToby Isaac if ((*fem)->ops->destroy) {ierr = (*(*fem)->ops->destroy)(*fem);CHKERRQ(ierr);} 33620cf1dd8SToby Isaac ierr = PetscHeaderDestroy(fem);CHKERRQ(ierr); 33720cf1dd8SToby Isaac PetscFunctionReturn(0); 33820cf1dd8SToby Isaac } 33920cf1dd8SToby Isaac 34020cf1dd8SToby Isaac /*@ 34120cf1dd8SToby Isaac PetscFECreate - Creates an empty PetscFE object. The type can then be set with PetscFESetType(). 34220cf1dd8SToby Isaac 343d083f849SBarry Smith Collective 34420cf1dd8SToby Isaac 34520cf1dd8SToby Isaac Input Parameter: 34620cf1dd8SToby Isaac . comm - The communicator for the PetscFE object 34720cf1dd8SToby Isaac 34820cf1dd8SToby Isaac Output Parameter: 34920cf1dd8SToby Isaac . fem - The PetscFE object 35020cf1dd8SToby Isaac 35120cf1dd8SToby Isaac Level: beginner 35220cf1dd8SToby Isaac 35320cf1dd8SToby Isaac .seealso: PetscFESetType(), PETSCFEGALERKIN 35420cf1dd8SToby Isaac @*/ 35520cf1dd8SToby Isaac PetscErrorCode PetscFECreate(MPI_Comm comm, PetscFE *fem) 35620cf1dd8SToby Isaac { 35720cf1dd8SToby Isaac PetscFE f; 35820cf1dd8SToby Isaac PetscErrorCode ierr; 35920cf1dd8SToby Isaac 36020cf1dd8SToby Isaac PetscFunctionBegin; 36120cf1dd8SToby Isaac PetscValidPointer(fem, 2); 36220cf1dd8SToby Isaac ierr = PetscCitationsRegister(FECitation,&FEcite);CHKERRQ(ierr); 36320cf1dd8SToby Isaac *fem = NULL; 36420cf1dd8SToby Isaac ierr = PetscFEInitializePackage();CHKERRQ(ierr); 36520cf1dd8SToby Isaac 36620cf1dd8SToby Isaac ierr = PetscHeaderCreate(f, PETSCFE_CLASSID, "PetscFE", "Finite Element", "PetscFE", comm, PetscFEDestroy, PetscFEView);CHKERRQ(ierr); 36720cf1dd8SToby Isaac 36820cf1dd8SToby Isaac f->basisSpace = NULL; 36920cf1dd8SToby Isaac f->dualSpace = NULL; 37020cf1dd8SToby Isaac f->numComponents = 1; 37120cf1dd8SToby Isaac f->subspaces = NULL; 37220cf1dd8SToby Isaac f->invV = NULL; 373ef0bb6c7SMatthew G. Knepley f->T = NULL; 374ef0bb6c7SMatthew G. Knepley f->Tf = NULL; 375ef0bb6c7SMatthew G. Knepley f->Tc = NULL; 376580bdb30SBarry Smith ierr = PetscArrayzero(&f->quadrature, 1);CHKERRQ(ierr); 377580bdb30SBarry Smith ierr = PetscArrayzero(&f->faceQuadrature, 1);CHKERRQ(ierr); 37820cf1dd8SToby Isaac f->blockSize = 0; 37920cf1dd8SToby Isaac f->numBlocks = 1; 38020cf1dd8SToby Isaac f->batchSize = 0; 38120cf1dd8SToby Isaac f->numBatches = 1; 38220cf1dd8SToby Isaac 38320cf1dd8SToby Isaac *fem = f; 38420cf1dd8SToby Isaac PetscFunctionReturn(0); 38520cf1dd8SToby Isaac } 38620cf1dd8SToby Isaac 38720cf1dd8SToby Isaac /*@ 38820cf1dd8SToby Isaac PetscFEGetSpatialDimension - Returns the spatial dimension of the element 38920cf1dd8SToby Isaac 39020cf1dd8SToby Isaac Not collective 39120cf1dd8SToby Isaac 39220cf1dd8SToby Isaac Input Parameter: 39320cf1dd8SToby Isaac . fem - The PetscFE object 39420cf1dd8SToby Isaac 39520cf1dd8SToby Isaac Output Parameter: 39620cf1dd8SToby Isaac . dim - The spatial dimension 39720cf1dd8SToby Isaac 39820cf1dd8SToby Isaac Level: intermediate 39920cf1dd8SToby Isaac 40020cf1dd8SToby Isaac .seealso: PetscFECreate() 40120cf1dd8SToby Isaac @*/ 40220cf1dd8SToby Isaac PetscErrorCode PetscFEGetSpatialDimension(PetscFE fem, PetscInt *dim) 40320cf1dd8SToby Isaac { 40420cf1dd8SToby Isaac DM dm; 40520cf1dd8SToby Isaac PetscErrorCode ierr; 40620cf1dd8SToby Isaac 40720cf1dd8SToby Isaac PetscFunctionBegin; 40820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 40920cf1dd8SToby Isaac PetscValidPointer(dim, 2); 41020cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(fem->dualSpace, &dm);CHKERRQ(ierr); 41120cf1dd8SToby Isaac ierr = DMGetDimension(dm, dim);CHKERRQ(ierr); 41220cf1dd8SToby Isaac PetscFunctionReturn(0); 41320cf1dd8SToby Isaac } 41420cf1dd8SToby Isaac 41520cf1dd8SToby Isaac /*@ 41620cf1dd8SToby Isaac PetscFESetNumComponents - Sets the number of components in the element 41720cf1dd8SToby Isaac 41820cf1dd8SToby Isaac Not collective 41920cf1dd8SToby Isaac 42020cf1dd8SToby Isaac Input Parameters: 42120cf1dd8SToby Isaac + fem - The PetscFE object 42220cf1dd8SToby Isaac - comp - The number of field components 42320cf1dd8SToby Isaac 42420cf1dd8SToby Isaac Level: intermediate 42520cf1dd8SToby Isaac 42620cf1dd8SToby Isaac .seealso: PetscFECreate() 42720cf1dd8SToby Isaac @*/ 42820cf1dd8SToby Isaac PetscErrorCode PetscFESetNumComponents(PetscFE fem, PetscInt comp) 42920cf1dd8SToby Isaac { 43020cf1dd8SToby Isaac PetscFunctionBegin; 43120cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 43220cf1dd8SToby Isaac fem->numComponents = comp; 43320cf1dd8SToby Isaac PetscFunctionReturn(0); 43420cf1dd8SToby Isaac } 43520cf1dd8SToby Isaac 43620cf1dd8SToby Isaac /*@ 43720cf1dd8SToby Isaac PetscFEGetNumComponents - Returns the number of components in the element 43820cf1dd8SToby Isaac 43920cf1dd8SToby Isaac Not collective 44020cf1dd8SToby Isaac 44120cf1dd8SToby Isaac Input Parameter: 44220cf1dd8SToby Isaac . fem - The PetscFE object 44320cf1dd8SToby Isaac 44420cf1dd8SToby Isaac Output Parameter: 44520cf1dd8SToby Isaac . comp - The number of field components 44620cf1dd8SToby Isaac 44720cf1dd8SToby Isaac Level: intermediate 44820cf1dd8SToby Isaac 44920cf1dd8SToby Isaac .seealso: PetscFECreate() 45020cf1dd8SToby Isaac @*/ 45120cf1dd8SToby Isaac PetscErrorCode PetscFEGetNumComponents(PetscFE fem, PetscInt *comp) 45220cf1dd8SToby Isaac { 45320cf1dd8SToby Isaac PetscFunctionBegin; 45420cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 45520cf1dd8SToby Isaac PetscValidPointer(comp, 2); 45620cf1dd8SToby Isaac *comp = fem->numComponents; 45720cf1dd8SToby Isaac PetscFunctionReturn(0); 45820cf1dd8SToby Isaac } 45920cf1dd8SToby Isaac 46020cf1dd8SToby Isaac /*@ 46120cf1dd8SToby Isaac PetscFESetTileSizes - Sets the tile sizes for evaluation 46220cf1dd8SToby Isaac 46320cf1dd8SToby Isaac Not collective 46420cf1dd8SToby Isaac 46520cf1dd8SToby Isaac Input Parameters: 46620cf1dd8SToby Isaac + fem - The PetscFE object 46720cf1dd8SToby Isaac . blockSize - The number of elements in a block 46820cf1dd8SToby Isaac . numBlocks - The number of blocks in a batch 46920cf1dd8SToby Isaac . batchSize - The number of elements in a batch 47020cf1dd8SToby Isaac - numBatches - The number of batches in a chunk 47120cf1dd8SToby Isaac 47220cf1dd8SToby Isaac Level: intermediate 47320cf1dd8SToby Isaac 47420cf1dd8SToby Isaac .seealso: PetscFECreate() 47520cf1dd8SToby Isaac @*/ 47620cf1dd8SToby Isaac PetscErrorCode PetscFESetTileSizes(PetscFE fem, PetscInt blockSize, PetscInt numBlocks, PetscInt batchSize, PetscInt numBatches) 47720cf1dd8SToby Isaac { 47820cf1dd8SToby Isaac PetscFunctionBegin; 47920cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 48020cf1dd8SToby Isaac fem->blockSize = blockSize; 48120cf1dd8SToby Isaac fem->numBlocks = numBlocks; 48220cf1dd8SToby Isaac fem->batchSize = batchSize; 48320cf1dd8SToby Isaac fem->numBatches = numBatches; 48420cf1dd8SToby Isaac PetscFunctionReturn(0); 48520cf1dd8SToby Isaac } 48620cf1dd8SToby Isaac 48720cf1dd8SToby Isaac /*@ 48820cf1dd8SToby Isaac PetscFEGetTileSizes - Returns the tile sizes for evaluation 48920cf1dd8SToby Isaac 49020cf1dd8SToby Isaac Not collective 49120cf1dd8SToby Isaac 49220cf1dd8SToby Isaac Input Parameter: 49320cf1dd8SToby Isaac . fem - The PetscFE object 49420cf1dd8SToby Isaac 49520cf1dd8SToby Isaac Output Parameters: 49620cf1dd8SToby Isaac + blockSize - The number of elements in a block 49720cf1dd8SToby Isaac . numBlocks - The number of blocks in a batch 49820cf1dd8SToby Isaac . batchSize - The number of elements in a batch 49920cf1dd8SToby Isaac - numBatches - The number of batches in a chunk 50020cf1dd8SToby Isaac 50120cf1dd8SToby Isaac Level: intermediate 50220cf1dd8SToby Isaac 50320cf1dd8SToby Isaac .seealso: PetscFECreate() 50420cf1dd8SToby Isaac @*/ 50520cf1dd8SToby Isaac PetscErrorCode PetscFEGetTileSizes(PetscFE fem, PetscInt *blockSize, PetscInt *numBlocks, PetscInt *batchSize, PetscInt *numBatches) 50620cf1dd8SToby Isaac { 50720cf1dd8SToby Isaac PetscFunctionBegin; 50820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 50920cf1dd8SToby Isaac if (blockSize) PetscValidPointer(blockSize, 2); 51020cf1dd8SToby Isaac if (numBlocks) PetscValidPointer(numBlocks, 3); 51120cf1dd8SToby Isaac if (batchSize) PetscValidPointer(batchSize, 4); 51220cf1dd8SToby Isaac if (numBatches) PetscValidPointer(numBatches, 5); 51320cf1dd8SToby Isaac if (blockSize) *blockSize = fem->blockSize; 51420cf1dd8SToby Isaac if (numBlocks) *numBlocks = fem->numBlocks; 51520cf1dd8SToby Isaac if (batchSize) *batchSize = fem->batchSize; 51620cf1dd8SToby Isaac if (numBatches) *numBatches = fem->numBatches; 51720cf1dd8SToby Isaac PetscFunctionReturn(0); 51820cf1dd8SToby Isaac } 51920cf1dd8SToby Isaac 52020cf1dd8SToby Isaac /*@ 52120cf1dd8SToby Isaac PetscFEGetBasisSpace - Returns the PetscSpace used for approximation of the solution 52220cf1dd8SToby Isaac 52320cf1dd8SToby Isaac Not collective 52420cf1dd8SToby Isaac 52520cf1dd8SToby Isaac Input Parameter: 52620cf1dd8SToby Isaac . fem - The PetscFE object 52720cf1dd8SToby Isaac 52820cf1dd8SToby Isaac Output Parameter: 52920cf1dd8SToby Isaac . sp - The PetscSpace object 53020cf1dd8SToby Isaac 53120cf1dd8SToby Isaac Level: intermediate 53220cf1dd8SToby Isaac 53320cf1dd8SToby Isaac .seealso: PetscFECreate() 53420cf1dd8SToby Isaac @*/ 53520cf1dd8SToby Isaac PetscErrorCode PetscFEGetBasisSpace(PetscFE fem, PetscSpace *sp) 53620cf1dd8SToby Isaac { 53720cf1dd8SToby Isaac PetscFunctionBegin; 53820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 53920cf1dd8SToby Isaac PetscValidPointer(sp, 2); 54020cf1dd8SToby Isaac *sp = fem->basisSpace; 54120cf1dd8SToby Isaac PetscFunctionReturn(0); 54220cf1dd8SToby Isaac } 54320cf1dd8SToby Isaac 54420cf1dd8SToby Isaac /*@ 54520cf1dd8SToby Isaac PetscFESetBasisSpace - Sets the PetscSpace used for approximation of the solution 54620cf1dd8SToby Isaac 54720cf1dd8SToby Isaac Not collective 54820cf1dd8SToby Isaac 54920cf1dd8SToby Isaac Input Parameters: 55020cf1dd8SToby Isaac + fem - The PetscFE object 55120cf1dd8SToby Isaac - sp - The PetscSpace object 55220cf1dd8SToby Isaac 55320cf1dd8SToby Isaac Level: intermediate 55420cf1dd8SToby Isaac 55520cf1dd8SToby Isaac .seealso: PetscFECreate() 55620cf1dd8SToby Isaac @*/ 55720cf1dd8SToby Isaac PetscErrorCode PetscFESetBasisSpace(PetscFE fem, PetscSpace sp) 55820cf1dd8SToby Isaac { 55920cf1dd8SToby Isaac PetscErrorCode ierr; 56020cf1dd8SToby Isaac 56120cf1dd8SToby Isaac PetscFunctionBegin; 56220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 56320cf1dd8SToby Isaac PetscValidHeaderSpecific(sp, PETSCSPACE_CLASSID, 2); 56420cf1dd8SToby Isaac ierr = PetscSpaceDestroy(&fem->basisSpace);CHKERRQ(ierr); 56520cf1dd8SToby Isaac fem->basisSpace = sp; 56620cf1dd8SToby Isaac ierr = PetscObjectReference((PetscObject) fem->basisSpace);CHKERRQ(ierr); 56720cf1dd8SToby Isaac PetscFunctionReturn(0); 56820cf1dd8SToby Isaac } 56920cf1dd8SToby Isaac 57020cf1dd8SToby Isaac /*@ 57120cf1dd8SToby Isaac PetscFEGetDualSpace - Returns the PetscDualSpace used to define the inner product 57220cf1dd8SToby Isaac 57320cf1dd8SToby Isaac Not collective 57420cf1dd8SToby Isaac 57520cf1dd8SToby Isaac Input Parameter: 57620cf1dd8SToby Isaac . fem - The PetscFE object 57720cf1dd8SToby Isaac 57820cf1dd8SToby Isaac Output Parameter: 57920cf1dd8SToby Isaac . sp - The PetscDualSpace object 58020cf1dd8SToby Isaac 58120cf1dd8SToby Isaac Level: intermediate 58220cf1dd8SToby Isaac 58320cf1dd8SToby Isaac .seealso: PetscFECreate() 58420cf1dd8SToby Isaac @*/ 58520cf1dd8SToby Isaac PetscErrorCode PetscFEGetDualSpace(PetscFE fem, PetscDualSpace *sp) 58620cf1dd8SToby Isaac { 58720cf1dd8SToby Isaac PetscFunctionBegin; 58820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 58920cf1dd8SToby Isaac PetscValidPointer(sp, 2); 59020cf1dd8SToby Isaac *sp = fem->dualSpace; 59120cf1dd8SToby Isaac PetscFunctionReturn(0); 59220cf1dd8SToby Isaac } 59320cf1dd8SToby Isaac 59420cf1dd8SToby Isaac /*@ 59520cf1dd8SToby Isaac PetscFESetDualSpace - Sets the PetscDualSpace used to define the inner product 59620cf1dd8SToby Isaac 59720cf1dd8SToby Isaac Not collective 59820cf1dd8SToby Isaac 59920cf1dd8SToby Isaac Input Parameters: 60020cf1dd8SToby Isaac + fem - The PetscFE object 60120cf1dd8SToby Isaac - sp - The PetscDualSpace object 60220cf1dd8SToby Isaac 60320cf1dd8SToby Isaac Level: intermediate 60420cf1dd8SToby Isaac 60520cf1dd8SToby Isaac .seealso: PetscFECreate() 60620cf1dd8SToby Isaac @*/ 60720cf1dd8SToby Isaac PetscErrorCode PetscFESetDualSpace(PetscFE fem, PetscDualSpace sp) 60820cf1dd8SToby Isaac { 60920cf1dd8SToby Isaac PetscErrorCode ierr; 61020cf1dd8SToby Isaac 61120cf1dd8SToby Isaac PetscFunctionBegin; 61220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 61320cf1dd8SToby Isaac PetscValidHeaderSpecific(sp, PETSCDUALSPACE_CLASSID, 2); 61420cf1dd8SToby Isaac ierr = PetscDualSpaceDestroy(&fem->dualSpace);CHKERRQ(ierr); 61520cf1dd8SToby Isaac fem->dualSpace = sp; 61620cf1dd8SToby Isaac ierr = PetscObjectReference((PetscObject) fem->dualSpace);CHKERRQ(ierr); 61720cf1dd8SToby Isaac PetscFunctionReturn(0); 61820cf1dd8SToby Isaac } 61920cf1dd8SToby Isaac 62020cf1dd8SToby Isaac /*@ 62120cf1dd8SToby Isaac PetscFEGetQuadrature - Returns the PetscQuadrature used to calculate inner products 62220cf1dd8SToby Isaac 62320cf1dd8SToby Isaac Not collective 62420cf1dd8SToby Isaac 62520cf1dd8SToby Isaac Input Parameter: 62620cf1dd8SToby Isaac . fem - The PetscFE object 62720cf1dd8SToby Isaac 62820cf1dd8SToby Isaac Output Parameter: 62920cf1dd8SToby Isaac . q - The PetscQuadrature object 63020cf1dd8SToby Isaac 63120cf1dd8SToby Isaac Level: intermediate 63220cf1dd8SToby Isaac 63320cf1dd8SToby Isaac .seealso: PetscFECreate() 63420cf1dd8SToby Isaac @*/ 63520cf1dd8SToby Isaac PetscErrorCode PetscFEGetQuadrature(PetscFE fem, PetscQuadrature *q) 63620cf1dd8SToby Isaac { 63720cf1dd8SToby Isaac PetscFunctionBegin; 63820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 63920cf1dd8SToby Isaac PetscValidPointer(q, 2); 64020cf1dd8SToby Isaac *q = fem->quadrature; 64120cf1dd8SToby Isaac PetscFunctionReturn(0); 64220cf1dd8SToby Isaac } 64320cf1dd8SToby Isaac 64420cf1dd8SToby Isaac /*@ 64520cf1dd8SToby Isaac PetscFESetQuadrature - Sets the PetscQuadrature used to calculate inner products 64620cf1dd8SToby Isaac 64720cf1dd8SToby Isaac Not collective 64820cf1dd8SToby Isaac 64920cf1dd8SToby Isaac Input Parameters: 65020cf1dd8SToby Isaac + fem - The PetscFE object 65120cf1dd8SToby Isaac - q - The PetscQuadrature object 65220cf1dd8SToby Isaac 65320cf1dd8SToby Isaac Level: intermediate 65420cf1dd8SToby Isaac 65520cf1dd8SToby Isaac .seealso: PetscFECreate() 65620cf1dd8SToby Isaac @*/ 65720cf1dd8SToby Isaac PetscErrorCode PetscFESetQuadrature(PetscFE fem, PetscQuadrature q) 65820cf1dd8SToby Isaac { 65920cf1dd8SToby Isaac PetscInt Nc, qNc; 66020cf1dd8SToby Isaac PetscErrorCode ierr; 66120cf1dd8SToby Isaac 66220cf1dd8SToby Isaac PetscFunctionBegin; 66320cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 664fd2fdbddSMatthew G. Knepley if (q == fem->quadrature) PetscFunctionReturn(0); 66520cf1dd8SToby Isaac ierr = PetscFEGetNumComponents(fem, &Nc);CHKERRQ(ierr); 66620cf1dd8SToby Isaac ierr = PetscQuadratureGetNumComponents(q, &qNc);CHKERRQ(ierr); 66720cf1dd8SToby Isaac if ((qNc != 1) && (Nc != qNc)) SETERRQ2(PetscObjectComm((PetscObject) fem), PETSC_ERR_ARG_SIZ, "FE components %D != Quadrature components %D and non-scalar quadrature", Nc, qNc); 668ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&fem->T);CHKERRQ(ierr); 669ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&fem->Tc);CHKERRQ(ierr); 670fd2fdbddSMatthew G. Knepley ierr = PetscObjectReference((PetscObject) q);CHKERRQ(ierr); 67120cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&fem->quadrature);CHKERRQ(ierr); 67220cf1dd8SToby Isaac fem->quadrature = q; 67320cf1dd8SToby Isaac PetscFunctionReturn(0); 67420cf1dd8SToby Isaac } 67520cf1dd8SToby Isaac 67620cf1dd8SToby Isaac /*@ 67720cf1dd8SToby Isaac PetscFEGetFaceQuadrature - Returns the PetscQuadrature used to calculate inner products on faces 67820cf1dd8SToby Isaac 67920cf1dd8SToby Isaac Not collective 68020cf1dd8SToby Isaac 68120cf1dd8SToby Isaac Input Parameter: 68220cf1dd8SToby Isaac . fem - The PetscFE object 68320cf1dd8SToby Isaac 68420cf1dd8SToby Isaac Output Parameter: 68520cf1dd8SToby Isaac . q - The PetscQuadrature object 68620cf1dd8SToby Isaac 68720cf1dd8SToby Isaac Level: intermediate 68820cf1dd8SToby Isaac 68920cf1dd8SToby Isaac .seealso: PetscFECreate() 69020cf1dd8SToby Isaac @*/ 69120cf1dd8SToby Isaac PetscErrorCode PetscFEGetFaceQuadrature(PetscFE fem, PetscQuadrature *q) 69220cf1dd8SToby Isaac { 69320cf1dd8SToby Isaac PetscFunctionBegin; 69420cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 69520cf1dd8SToby Isaac PetscValidPointer(q, 2); 69620cf1dd8SToby Isaac *q = fem->faceQuadrature; 69720cf1dd8SToby Isaac PetscFunctionReturn(0); 69820cf1dd8SToby Isaac } 69920cf1dd8SToby Isaac 70020cf1dd8SToby Isaac /*@ 70120cf1dd8SToby Isaac PetscFESetFaceQuadrature - Sets the PetscQuadrature used to calculate inner products on faces 70220cf1dd8SToby Isaac 70320cf1dd8SToby Isaac Not collective 70420cf1dd8SToby Isaac 70520cf1dd8SToby Isaac Input Parameters: 70620cf1dd8SToby Isaac + fem - The PetscFE object 70720cf1dd8SToby Isaac - q - The PetscQuadrature object 70820cf1dd8SToby Isaac 70920cf1dd8SToby Isaac Level: intermediate 71020cf1dd8SToby Isaac 71120cf1dd8SToby Isaac .seealso: PetscFECreate() 71220cf1dd8SToby Isaac @*/ 71320cf1dd8SToby Isaac PetscErrorCode PetscFESetFaceQuadrature(PetscFE fem, PetscQuadrature q) 71420cf1dd8SToby Isaac { 715ef0bb6c7SMatthew G. Knepley PetscInt Nc, qNc; 71620cf1dd8SToby Isaac PetscErrorCode ierr; 71720cf1dd8SToby Isaac 71820cf1dd8SToby Isaac PetscFunctionBegin; 71920cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 720ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetNumComponents(fem, &Nc);CHKERRQ(ierr); 721ef0bb6c7SMatthew G. Knepley ierr = PetscQuadratureGetNumComponents(q, &qNc);CHKERRQ(ierr); 722ef0bb6c7SMatthew G. Knepley if ((qNc != 1) && (Nc != qNc)) SETERRQ2(PetscObjectComm((PetscObject) fem), PETSC_ERR_ARG_SIZ, "FE components %D != Quadrature components %D and non-scalar quadrature", Nc, qNc); 723ef0bb6c7SMatthew G. Knepley ierr = PetscTabulationDestroy(&fem->Tf);CHKERRQ(ierr); 72420cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&fem->faceQuadrature);CHKERRQ(ierr); 72520cf1dd8SToby Isaac fem->faceQuadrature = q; 72620cf1dd8SToby Isaac ierr = PetscObjectReference((PetscObject) q);CHKERRQ(ierr); 72720cf1dd8SToby Isaac PetscFunctionReturn(0); 72820cf1dd8SToby Isaac } 72920cf1dd8SToby Isaac 7305dc5c000SMatthew G. Knepley /*@ 7315dc5c000SMatthew G. Knepley PetscFECopyQuadrature - Copy both volumetric and surface quadrature 7325dc5c000SMatthew G. Knepley 7335dc5c000SMatthew G. Knepley Not collective 7345dc5c000SMatthew G. Knepley 7355dc5c000SMatthew G. Knepley Input Parameters: 7365dc5c000SMatthew G. Knepley + sfe - The PetscFE source for the quadratures 7375dc5c000SMatthew G. Knepley - tfe - The PetscFE target for the quadratures 7385dc5c000SMatthew G. Knepley 7395dc5c000SMatthew G. Knepley Level: intermediate 7405dc5c000SMatthew G. Knepley 7415dc5c000SMatthew G. Knepley .seealso: PetscFECreate(), PetscFESetQuadrature(), PetscFESetFaceQuadrature() 7425dc5c000SMatthew G. Knepley @*/ 7435dc5c000SMatthew G. Knepley PetscErrorCode PetscFECopyQuadrature(PetscFE sfe, PetscFE tfe) 7445dc5c000SMatthew G. Knepley { 7455dc5c000SMatthew G. Knepley PetscQuadrature q; 7465dc5c000SMatthew G. Knepley PetscErrorCode ierr; 7475dc5c000SMatthew G. Knepley 7485dc5c000SMatthew G. Knepley PetscFunctionBegin; 7495dc5c000SMatthew G. Knepley PetscValidHeaderSpecific(sfe, PETSCFE_CLASSID, 1); 7505dc5c000SMatthew G. Knepley PetscValidHeaderSpecific(tfe, PETSCFE_CLASSID, 2); 7515dc5c000SMatthew G. Knepley ierr = PetscFEGetQuadrature(sfe, &q);CHKERRQ(ierr); 7525dc5c000SMatthew G. Knepley ierr = PetscFESetQuadrature(tfe, q);CHKERRQ(ierr); 7535dc5c000SMatthew G. Knepley ierr = PetscFEGetFaceQuadrature(sfe, &q);CHKERRQ(ierr); 7545dc5c000SMatthew G. Knepley ierr = PetscFESetFaceQuadrature(tfe, q);CHKERRQ(ierr); 7555dc5c000SMatthew G. Knepley PetscFunctionReturn(0); 7565dc5c000SMatthew G. Knepley } 7575dc5c000SMatthew G. Knepley 75820cf1dd8SToby Isaac /*@C 75920cf1dd8SToby Isaac PetscFEGetNumDof - Returns the number of dofs (dual basis vectors) associated to mesh points on the reference cell of a given dimension 76020cf1dd8SToby Isaac 76120cf1dd8SToby Isaac Not collective 76220cf1dd8SToby Isaac 76320cf1dd8SToby Isaac Input Parameter: 76420cf1dd8SToby Isaac . fem - The PetscFE object 76520cf1dd8SToby Isaac 76620cf1dd8SToby Isaac Output Parameter: 76720cf1dd8SToby Isaac . numDof - Array with the number of dofs per dimension 76820cf1dd8SToby Isaac 76920cf1dd8SToby Isaac Level: intermediate 77020cf1dd8SToby Isaac 77120cf1dd8SToby Isaac .seealso: PetscFECreate() 77220cf1dd8SToby Isaac @*/ 77320cf1dd8SToby Isaac PetscErrorCode PetscFEGetNumDof(PetscFE fem, const PetscInt **numDof) 77420cf1dd8SToby Isaac { 77520cf1dd8SToby Isaac PetscErrorCode ierr; 77620cf1dd8SToby Isaac 77720cf1dd8SToby Isaac PetscFunctionBegin; 77820cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 77920cf1dd8SToby Isaac PetscValidPointer(numDof, 2); 78020cf1dd8SToby Isaac ierr = PetscDualSpaceGetNumDof(fem->dualSpace, numDof);CHKERRQ(ierr); 78120cf1dd8SToby Isaac PetscFunctionReturn(0); 78220cf1dd8SToby Isaac } 78320cf1dd8SToby Isaac 78420cf1dd8SToby Isaac /*@C 785ef0bb6c7SMatthew G. Knepley PetscFEGetCellTabulation - Returns the tabulation of the basis functions at the quadrature points on the reference cell 78620cf1dd8SToby Isaac 78720cf1dd8SToby Isaac Not collective 78820cf1dd8SToby Isaac 78920cf1dd8SToby Isaac Input Parameter: 790f9244615SMatthew G. Knepley + fem - The PetscFE object 791f9244615SMatthew G. Knepley - k - The highest derivative we need to tabulate, very often 1 79220cf1dd8SToby Isaac 793ef0bb6c7SMatthew G. Knepley Output Parameter: 794ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at quadrature points 79520cf1dd8SToby Isaac 79620cf1dd8SToby Isaac Note: 797ef0bb6c7SMatthew G. Knepley $ T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 798ef0bb6c7SMatthew G. Knepley $ T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 799ef0bb6c7SMatthew G. Knepley $ T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 80020cf1dd8SToby Isaac 80120cf1dd8SToby Isaac Level: intermediate 80220cf1dd8SToby Isaac 803ef0bb6c7SMatthew G. Knepley .seealso: PetscFECreateTabulation(), PetscTabulationDestroy() 80420cf1dd8SToby Isaac @*/ 805f9244615SMatthew G. Knepley PetscErrorCode PetscFEGetCellTabulation(PetscFE fem, PetscInt k, PetscTabulation *T) 80620cf1dd8SToby Isaac { 80720cf1dd8SToby Isaac PetscInt npoints; 80820cf1dd8SToby Isaac const PetscReal *points; 80920cf1dd8SToby Isaac PetscErrorCode ierr; 81020cf1dd8SToby Isaac 81120cf1dd8SToby Isaac PetscFunctionBegin; 81220cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 813ef0bb6c7SMatthew G. Knepley PetscValidPointer(T, 2); 81420cf1dd8SToby Isaac ierr = PetscQuadratureGetData(fem->quadrature, NULL, NULL, &npoints, &points, NULL);CHKERRQ(ierr); 815f9244615SMatthew G. Knepley if (!fem->T) {ierr = PetscFECreateTabulation(fem, 1, npoints, points, k, &fem->T);CHKERRQ(ierr);} 816f9244615SMatthew G. Knepley if (fem->T && k > fem->T->K) SETERRQ2(PetscObjectComm((PetscObject) fem), PETSC_ERR_ARG_OUTOFRANGE, "Requested %D derivatives, but only tabulated %D", k, fem->T->K); 817ef0bb6c7SMatthew G. Knepley *T = fem->T; 81820cf1dd8SToby Isaac PetscFunctionReturn(0); 81920cf1dd8SToby Isaac } 82020cf1dd8SToby Isaac 8212b99622eSMatthew G. Knepley /*@C 822ef0bb6c7SMatthew G. Knepley PetscFEGetFaceTabulation - Returns the tabulation of the basis functions at the face quadrature points for each face of the reference cell 8232b99622eSMatthew G. Knepley 8242b99622eSMatthew G. Knepley Not collective 8252b99622eSMatthew G. Knepley 8262b99622eSMatthew G. Knepley Input Parameter: 827f9244615SMatthew G. Knepley + fem - The PetscFE object 828f9244615SMatthew G. Knepley - k - The highest derivative we need to tabulate, very often 1 8292b99622eSMatthew G. Knepley 8302b99622eSMatthew G. Knepley Output Parameters: 831ef0bb6c7SMatthew G. Knepley . Tf - The basis function values and derviatives at face quadrature points 8322b99622eSMatthew G. Knepley 8332b99622eSMatthew G. Knepley Note: 834ef0bb6c7SMatthew G. Knepley $ T->T[0] = Bf[((f*Nq + q)*pdim + i)*Nc + c] is the value at point f,q for basis function i and component c 835ef0bb6c7SMatthew G. Knepley $ T->T[1] = Df[(((f*Nq + q)*pdim + i)*Nc + c)*dim + d] is the derivative value at point f,q for basis function i, component c, in direction d 836ef0bb6c7SMatthew G. Knepley $ T->T[2] = Hf[((((f*Nq + q)*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point f,q for basis function i, component c, in directions d and e 8372b99622eSMatthew G. Knepley 8382b99622eSMatthew G. Knepley Level: intermediate 8392b99622eSMatthew G. Knepley 840ef0bb6c7SMatthew G. Knepley .seealso: PetscFEGetCellTabulation(), PetscFECreateTabulation(), PetscTabulationDestroy() 8412b99622eSMatthew G. Knepley @*/ 842f9244615SMatthew G. Knepley PetscErrorCode PetscFEGetFaceTabulation(PetscFE fem, PetscInt k, PetscTabulation *Tf) 84320cf1dd8SToby Isaac { 84420cf1dd8SToby Isaac PetscErrorCode ierr; 84520cf1dd8SToby Isaac 84620cf1dd8SToby Isaac PetscFunctionBegin; 84720cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 848ef0bb6c7SMatthew G. Knepley PetscValidPointer(Tf, 2); 849ef0bb6c7SMatthew G. Knepley if (!fem->Tf) { 85020cf1dd8SToby Isaac const PetscReal xi0[3] = {-1., -1., -1.}; 85120cf1dd8SToby Isaac PetscReal v0[3], J[9], detJ; 85220cf1dd8SToby Isaac PetscQuadrature fq; 85320cf1dd8SToby Isaac PetscDualSpace sp; 85420cf1dd8SToby Isaac DM dm; 85520cf1dd8SToby Isaac const PetscInt *faces; 85620cf1dd8SToby Isaac PetscInt dim, numFaces, f, npoints, q; 85720cf1dd8SToby Isaac const PetscReal *points; 85820cf1dd8SToby Isaac PetscReal *facePoints; 85920cf1dd8SToby Isaac 86020cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fem, &sp);CHKERRQ(ierr); 86120cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(sp, &dm);CHKERRQ(ierr); 86220cf1dd8SToby Isaac ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 86320cf1dd8SToby Isaac ierr = DMPlexGetConeSize(dm, 0, &numFaces);CHKERRQ(ierr); 86420cf1dd8SToby Isaac ierr = DMPlexGetCone(dm, 0, &faces);CHKERRQ(ierr); 86520cf1dd8SToby Isaac ierr = PetscFEGetFaceQuadrature(fem, &fq);CHKERRQ(ierr); 86620cf1dd8SToby Isaac if (fq) { 86720cf1dd8SToby Isaac ierr = PetscQuadratureGetData(fq, NULL, NULL, &npoints, &points, NULL);CHKERRQ(ierr); 86820cf1dd8SToby Isaac ierr = PetscMalloc1(numFaces*npoints*dim, &facePoints);CHKERRQ(ierr); 86920cf1dd8SToby Isaac for (f = 0; f < numFaces; ++f) { 87020cf1dd8SToby Isaac ierr = DMPlexComputeCellGeometryFEM(dm, faces[f], NULL, v0, J, NULL, &detJ);CHKERRQ(ierr); 87120cf1dd8SToby Isaac for (q = 0; q < npoints; ++q) CoordinatesRefToReal(dim, dim-1, xi0, v0, J, &points[q*(dim-1)], &facePoints[(f*npoints+q)*dim]); 87220cf1dd8SToby Isaac } 873f9244615SMatthew G. Knepley ierr = PetscFECreateTabulation(fem, numFaces, npoints, facePoints, k, &fem->Tf);CHKERRQ(ierr); 87420cf1dd8SToby Isaac ierr = PetscFree(facePoints);CHKERRQ(ierr); 87520cf1dd8SToby Isaac } 87620cf1dd8SToby Isaac } 877f9244615SMatthew G. Knepley if (fem->Tf && k > fem->Tf->K) SETERRQ2(PetscObjectComm((PetscObject) fem), PETSC_ERR_ARG_OUTOFRANGE, "Requested %D derivatives, but only tabulated %D", k, fem->Tf->K); 878ef0bb6c7SMatthew G. Knepley *Tf = fem->Tf; 87920cf1dd8SToby Isaac PetscFunctionReturn(0); 88020cf1dd8SToby Isaac } 88120cf1dd8SToby Isaac 8822b99622eSMatthew G. Knepley /*@C 883ef0bb6c7SMatthew G. Knepley PetscFEGetFaceCentroidTabulation - Returns the tabulation of the basis functions at the face centroid points 8842b99622eSMatthew G. Knepley 8852b99622eSMatthew G. Knepley Not collective 8862b99622eSMatthew G. Knepley 8872b99622eSMatthew G. Knepley Input Parameter: 8882b99622eSMatthew G. Knepley . fem - The PetscFE object 8892b99622eSMatthew G. Knepley 8902b99622eSMatthew G. Knepley Output Parameters: 891ef0bb6c7SMatthew G. Knepley . Tc - The basis function values at face centroid points 8922b99622eSMatthew G. Knepley 8932b99622eSMatthew G. Knepley Note: 894ef0bb6c7SMatthew G. Knepley $ T->T[0] = Bf[(f*pdim + i)*Nc + c] is the value at point f for basis function i and component c 8952b99622eSMatthew G. Knepley 8962b99622eSMatthew G. Knepley Level: intermediate 8972b99622eSMatthew G. Knepley 898ef0bb6c7SMatthew G. Knepley .seealso: PetscFEGetFaceTabulation(), PetscFEGetCellTabulation(), PetscFECreateTabulation(), PetscTabulationDestroy() 8992b99622eSMatthew G. Knepley @*/ 900ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFEGetFaceCentroidTabulation(PetscFE fem, PetscTabulation *Tc) 90120cf1dd8SToby Isaac { 90220cf1dd8SToby Isaac PetscErrorCode ierr; 90320cf1dd8SToby Isaac 90420cf1dd8SToby Isaac PetscFunctionBegin; 90520cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 906ef0bb6c7SMatthew G. Knepley PetscValidPointer(Tc, 2); 907ef0bb6c7SMatthew G. Knepley if (!fem->Tc) { 90820cf1dd8SToby Isaac PetscDualSpace sp; 90920cf1dd8SToby Isaac DM dm; 91020cf1dd8SToby Isaac const PetscInt *cone; 91120cf1dd8SToby Isaac PetscReal *centroids; 91220cf1dd8SToby Isaac PetscInt dim, numFaces, f; 91320cf1dd8SToby Isaac 91420cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fem, &sp);CHKERRQ(ierr); 91520cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(sp, &dm);CHKERRQ(ierr); 91620cf1dd8SToby Isaac ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 91720cf1dd8SToby Isaac ierr = DMPlexGetConeSize(dm, 0, &numFaces);CHKERRQ(ierr); 91820cf1dd8SToby Isaac ierr = DMPlexGetCone(dm, 0, &cone);CHKERRQ(ierr); 91920cf1dd8SToby Isaac ierr = PetscMalloc1(numFaces*dim, ¢roids);CHKERRQ(ierr); 92020cf1dd8SToby Isaac for (f = 0; f < numFaces; ++f) {ierr = DMPlexComputeCellGeometryFVM(dm, cone[f], NULL, ¢roids[f*dim], NULL);CHKERRQ(ierr);} 921ef0bb6c7SMatthew G. Knepley ierr = PetscFECreateTabulation(fem, 1, numFaces, centroids, 0, &fem->Tc);CHKERRQ(ierr); 92220cf1dd8SToby Isaac ierr = PetscFree(centroids);CHKERRQ(ierr); 92320cf1dd8SToby Isaac } 924ef0bb6c7SMatthew G. Knepley *Tc = fem->Tc; 92520cf1dd8SToby Isaac PetscFunctionReturn(0); 92620cf1dd8SToby Isaac } 92720cf1dd8SToby Isaac 92820cf1dd8SToby Isaac /*@C 929ef0bb6c7SMatthew G. Knepley PetscFECreateTabulation - Tabulates the basis functions, and perhaps derivatives, at the points provided. 93020cf1dd8SToby Isaac 93120cf1dd8SToby Isaac Not collective 93220cf1dd8SToby Isaac 93320cf1dd8SToby Isaac Input Parameters: 93420cf1dd8SToby Isaac + fem - The PetscFE object 935ef0bb6c7SMatthew G. Knepley . nrepl - The number of replicas 936ef0bb6c7SMatthew G. Knepley . npoints - The number of tabulation points in a replica 937ef0bb6c7SMatthew G. Knepley . points - The tabulation point coordinates 938ef0bb6c7SMatthew G. Knepley - K - The number of derivatives calculated 93920cf1dd8SToby Isaac 940ef0bb6c7SMatthew G. Knepley Output Parameter: 941ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at tabulation points 94220cf1dd8SToby Isaac 94320cf1dd8SToby Isaac Note: 944ef0bb6c7SMatthew G. Knepley $ T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 945ef0bb6c7SMatthew G. Knepley $ T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 946ef0bb6c7SMatthew G. Knepley $ T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 94720cf1dd8SToby Isaac 94820cf1dd8SToby Isaac Level: intermediate 94920cf1dd8SToby Isaac 950ef0bb6c7SMatthew G. Knepley .seealso: PetscFEGetCellTabulation(), PetscTabulationDestroy() 95120cf1dd8SToby Isaac @*/ 952ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFECreateTabulation(PetscFE fem, PetscInt nrepl, PetscInt npoints, const PetscReal points[], PetscInt K, PetscTabulation *T) 95320cf1dd8SToby Isaac { 95420cf1dd8SToby Isaac DM dm; 955ef0bb6c7SMatthew G. Knepley PetscDualSpace Q; 956ef0bb6c7SMatthew G. Knepley PetscInt Nb; /* Dimension of FE space P */ 957ef0bb6c7SMatthew G. Knepley PetscInt Nc; /* Field components */ 958ef0bb6c7SMatthew G. Knepley PetscInt cdim; /* Reference coordinate dimension */ 959ef0bb6c7SMatthew G. Knepley PetscInt k; 96020cf1dd8SToby Isaac PetscErrorCode ierr; 96120cf1dd8SToby Isaac 96220cf1dd8SToby Isaac PetscFunctionBegin; 963ef0bb6c7SMatthew G. Knepley if (!npoints || !fem->dualSpace || K < 0) { 964ef0bb6c7SMatthew G. Knepley *T = NULL; 96520cf1dd8SToby Isaac PetscFunctionReturn(0); 96620cf1dd8SToby Isaac } 96720cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 96840a2aa30SMatthew G. Knepley PetscValidPointer(points, 4); 96940a2aa30SMatthew G. Knepley PetscValidPointer(T, 6); 970ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetDualSpace(fem, &Q);CHKERRQ(ierr); 971ef0bb6c7SMatthew G. Knepley ierr = PetscDualSpaceGetDM(Q, &dm);CHKERRQ(ierr); 972ef0bb6c7SMatthew G. Knepley ierr = DMGetDimension(dm, &cdim);CHKERRQ(ierr); 973ef0bb6c7SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &Nb);CHKERRQ(ierr); 974ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetNumComponents(fem, &Nc);CHKERRQ(ierr); 975ef0bb6c7SMatthew G. Knepley ierr = PetscMalloc1(1, T);CHKERRQ(ierr); 976ef0bb6c7SMatthew G. Knepley (*T)->K = !cdim ? 0 : K; 977ef0bb6c7SMatthew G. Knepley (*T)->Nr = nrepl; 978ef0bb6c7SMatthew G. Knepley (*T)->Np = npoints; 979ef0bb6c7SMatthew G. Knepley (*T)->Nb = Nb; 980ef0bb6c7SMatthew G. Knepley (*T)->Nc = Nc; 981ef0bb6c7SMatthew G. Knepley (*T)->cdim = cdim; 982ef0bb6c7SMatthew G. Knepley ierr = PetscMalloc1((*T)->K+1, &(*T)->T);CHKERRQ(ierr); 983ef0bb6c7SMatthew G. Knepley for (k = 0; k <= (*T)->K; ++k) { 984ef0bb6c7SMatthew G. Knepley ierr = PetscMalloc1(nrepl*npoints*Nb*Nc*PetscPowInt(cdim, k), &(*T)->T[k]);CHKERRQ(ierr); 98520cf1dd8SToby Isaac } 986ef0bb6c7SMatthew G. Knepley ierr = (*fem->ops->createtabulation)(fem, nrepl*npoints, points, K, *T);CHKERRQ(ierr); 98720cf1dd8SToby Isaac PetscFunctionReturn(0); 98820cf1dd8SToby Isaac } 98920cf1dd8SToby Isaac 9902b99622eSMatthew G. Knepley /*@C 991ef0bb6c7SMatthew G. Knepley PetscFEComputeTabulation - Tabulates the basis functions, and perhaps derivatives, at the points provided. 9922b99622eSMatthew G. Knepley 9932b99622eSMatthew G. Knepley Not collective 9942b99622eSMatthew G. Knepley 9952b99622eSMatthew G. Knepley Input Parameters: 9962b99622eSMatthew G. Knepley + fem - The PetscFE object 9972b99622eSMatthew G. Knepley . npoints - The number of tabulation points 9982b99622eSMatthew G. Knepley . points - The tabulation point coordinates 999ef0bb6c7SMatthew G. Knepley . K - The number of derivatives calculated 1000ef0bb6c7SMatthew G. Knepley - T - An existing tabulation object with enough allocated space 1001ef0bb6c7SMatthew G. Knepley 1002ef0bb6c7SMatthew G. Knepley Output Parameter: 1003ef0bb6c7SMatthew G. Knepley . T - The basis function values and derivatives at tabulation points 10042b99622eSMatthew G. Knepley 10052b99622eSMatthew G. Knepley Note: 1006ef0bb6c7SMatthew G. Knepley $ T->T[0] = B[(p*pdim + i)*Nc + c] is the value at point p for basis function i and component c 1007ef0bb6c7SMatthew G. Knepley $ T->T[1] = D[((p*pdim + i)*Nc + c)*dim + d] is the derivative value at point p for basis function i, component c, in direction d 1008ef0bb6c7SMatthew G. Knepley $ T->T[2] = H[(((p*pdim + i)*Nc + c)*dim + d)*dim + e] is the value at point p for basis function i, component c, in directions d and e 10092b99622eSMatthew G. Knepley 10102b99622eSMatthew G. Knepley Level: intermediate 10112b99622eSMatthew G. Knepley 1012ef0bb6c7SMatthew G. Knepley .seealso: PetscFEGetCellTabulation(), PetscTabulationDestroy() 10132b99622eSMatthew G. Knepley @*/ 1014ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFEComputeTabulation(PetscFE fem, PetscInt npoints, const PetscReal points[], PetscInt K, PetscTabulation T) 1015ef0bb6c7SMatthew G. Knepley { 1016ef0bb6c7SMatthew G. Knepley PetscErrorCode ierr; 1017ef0bb6c7SMatthew G. Knepley 1018ef0bb6c7SMatthew G. Knepley PetscFunctionBeginHot; 1019ef0bb6c7SMatthew G. Knepley if (!npoints || !fem->dualSpace || K < 0) PetscFunctionReturn(0); 1020ef0bb6c7SMatthew G. Knepley PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 1021ef0bb6c7SMatthew G. Knepley PetscValidPointer(points, 3); 1022ef0bb6c7SMatthew G. Knepley PetscValidPointer(T, 5); 102376bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { 102420cf1dd8SToby Isaac DM dm; 1025ef0bb6c7SMatthew G. Knepley PetscDualSpace Q; 1026ef0bb6c7SMatthew G. Knepley PetscInt Nb; /* Dimension of FE space P */ 1027ef0bb6c7SMatthew G. Knepley PetscInt Nc; /* Field components */ 1028ef0bb6c7SMatthew G. Knepley PetscInt cdim; /* Reference coordinate dimension */ 1029ef0bb6c7SMatthew G. Knepley 1030ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetDualSpace(fem, &Q);CHKERRQ(ierr); 1031ef0bb6c7SMatthew G. Knepley ierr = PetscDualSpaceGetDM(Q, &dm);CHKERRQ(ierr); 1032ef0bb6c7SMatthew G. Knepley ierr = DMGetDimension(dm, &cdim);CHKERRQ(ierr); 1033ef0bb6c7SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &Nb);CHKERRQ(ierr); 1034ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetNumComponents(fem, &Nc);CHKERRQ(ierr); 1035ef0bb6c7SMatthew G. Knepley if (T->K != (!cdim ? 0 : K)) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation K %D must match requested K %D", T->K, !cdim ? 0 : K); 1036ef0bb6c7SMatthew G. Knepley if (T->Nb != Nb) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation Nb %D must match requested Nb %D", T->Nb, Nb); 1037ef0bb6c7SMatthew G. Knepley if (T->Nc != Nc) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation Nc %D must match requested Nc %D", T->Nc, Nc); 1038ef0bb6c7SMatthew G. Knepley if (T->cdim != cdim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Tabulation cdim %D must match requested cdim %D", T->cdim, cdim); 1039ef0bb6c7SMatthew G. Knepley } 1040ef0bb6c7SMatthew G. Knepley T->Nr = 1; 1041ef0bb6c7SMatthew G. Knepley T->Np = npoints; 1042ef0bb6c7SMatthew G. Knepley ierr = (*fem->ops->createtabulation)(fem, npoints, points, K, T);CHKERRQ(ierr); 1043ef0bb6c7SMatthew G. Knepley PetscFunctionReturn(0); 1044ef0bb6c7SMatthew G. Knepley } 1045ef0bb6c7SMatthew G. Knepley 1046ef0bb6c7SMatthew G. Knepley /*@C 1047ef0bb6c7SMatthew G. Knepley PetscTabulationDestroy - Frees memory from the associated tabulation. 1048ef0bb6c7SMatthew G. Knepley 1049ef0bb6c7SMatthew G. Knepley Not collective 1050ef0bb6c7SMatthew G. Knepley 1051ef0bb6c7SMatthew G. Knepley Input Parameter: 1052ef0bb6c7SMatthew G. Knepley . T - The tabulation 1053ef0bb6c7SMatthew G. Knepley 1054ef0bb6c7SMatthew G. Knepley Level: intermediate 1055ef0bb6c7SMatthew G. Knepley 1056ef0bb6c7SMatthew G. Knepley .seealso: PetscFECreateTabulation(), PetscFEGetCellTabulation() 1057ef0bb6c7SMatthew G. Knepley @*/ 1058ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscTabulationDestroy(PetscTabulation *T) 1059ef0bb6c7SMatthew G. Knepley { 1060ef0bb6c7SMatthew G. Knepley PetscInt k; 106120cf1dd8SToby Isaac PetscErrorCode ierr; 106220cf1dd8SToby Isaac 106320cf1dd8SToby Isaac PetscFunctionBegin; 1064ef0bb6c7SMatthew G. Knepley PetscValidPointer(T, 1); 1065ef0bb6c7SMatthew G. Knepley if (!T || !(*T)) PetscFunctionReturn(0); 1066ef0bb6c7SMatthew G. Knepley for (k = 0; k <= (*T)->K; ++k) {ierr = PetscFree((*T)->T[k]);CHKERRQ(ierr);} 1067ef0bb6c7SMatthew G. Knepley ierr = PetscFree((*T)->T);CHKERRQ(ierr); 1068ef0bb6c7SMatthew G. Knepley ierr = PetscFree(*T);CHKERRQ(ierr); 1069ef0bb6c7SMatthew G. Knepley *T = NULL; 107020cf1dd8SToby Isaac PetscFunctionReturn(0); 107120cf1dd8SToby Isaac } 107220cf1dd8SToby Isaac 107320cf1dd8SToby Isaac PETSC_EXTERN PetscErrorCode PetscFECreatePointTrace(PetscFE fe, PetscInt refPoint, PetscFE *trFE) 107420cf1dd8SToby Isaac { 107520cf1dd8SToby Isaac PetscSpace bsp, bsubsp; 107620cf1dd8SToby Isaac PetscDualSpace dsp, dsubsp; 107720cf1dd8SToby Isaac PetscInt dim, depth, numComp, i, j, coneSize, order; 107820cf1dd8SToby Isaac PetscFEType type; 107920cf1dd8SToby Isaac DM dm; 108020cf1dd8SToby Isaac DMLabel label; 108120cf1dd8SToby Isaac PetscReal *xi, *v, *J, detJ; 1082db11e2ebSMatthew G. Knepley const char *name; 108320cf1dd8SToby Isaac PetscQuadrature origin, fullQuad, subQuad; 108420cf1dd8SToby Isaac PetscErrorCode ierr; 108520cf1dd8SToby Isaac 108620cf1dd8SToby Isaac PetscFunctionBegin; 108720cf1dd8SToby Isaac PetscValidHeaderSpecific(fe,PETSCFE_CLASSID,1); 108820cf1dd8SToby Isaac PetscValidPointer(trFE,3); 108920cf1dd8SToby Isaac ierr = PetscFEGetBasisSpace(fe,&bsp);CHKERRQ(ierr); 109020cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fe,&dsp);CHKERRQ(ierr); 109120cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(dsp,&dm);CHKERRQ(ierr); 109220cf1dd8SToby Isaac ierr = DMGetDimension(dm,&dim);CHKERRQ(ierr); 109320cf1dd8SToby Isaac ierr = DMPlexGetDepthLabel(dm,&label);CHKERRQ(ierr); 109420cf1dd8SToby Isaac ierr = DMLabelGetValue(label,refPoint,&depth);CHKERRQ(ierr); 109520cf1dd8SToby Isaac ierr = PetscCalloc1(depth,&xi);CHKERRQ(ierr); 109620cf1dd8SToby Isaac ierr = PetscMalloc1(dim,&v);CHKERRQ(ierr); 109720cf1dd8SToby Isaac ierr = PetscMalloc1(dim*dim,&J);CHKERRQ(ierr); 109820cf1dd8SToby Isaac for (i = 0; i < depth; i++) xi[i] = 0.; 109920cf1dd8SToby Isaac ierr = PetscQuadratureCreate(PETSC_COMM_SELF,&origin);CHKERRQ(ierr); 110020cf1dd8SToby Isaac ierr = PetscQuadratureSetData(origin,depth,0,1,xi,NULL);CHKERRQ(ierr); 110120cf1dd8SToby Isaac ierr = DMPlexComputeCellGeometryFEM(dm,refPoint,origin,v,J,NULL,&detJ);CHKERRQ(ierr); 110220cf1dd8SToby Isaac /* CellGeometryFEM computes the expanded Jacobian, we want the true jacobian */ 110320cf1dd8SToby Isaac for (i = 1; i < dim; i++) { 110420cf1dd8SToby Isaac for (j = 0; j < depth; j++) { 110520cf1dd8SToby Isaac J[i * depth + j] = J[i * dim + j]; 110620cf1dd8SToby Isaac } 110720cf1dd8SToby Isaac } 110820cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&origin);CHKERRQ(ierr); 110920cf1dd8SToby Isaac ierr = PetscDualSpaceGetPointSubspace(dsp,refPoint,&dsubsp);CHKERRQ(ierr); 111020cf1dd8SToby Isaac ierr = PetscSpaceCreateSubspace(bsp,dsubsp,v,J,NULL,NULL,PETSC_OWN_POINTER,&bsubsp);CHKERRQ(ierr); 111120cf1dd8SToby Isaac ierr = PetscSpaceSetUp(bsubsp);CHKERRQ(ierr); 111220cf1dd8SToby Isaac ierr = PetscFECreate(PetscObjectComm((PetscObject)fe),trFE);CHKERRQ(ierr); 111320cf1dd8SToby Isaac ierr = PetscFEGetType(fe,&type);CHKERRQ(ierr); 111420cf1dd8SToby Isaac ierr = PetscFESetType(*trFE,type);CHKERRQ(ierr); 111520cf1dd8SToby Isaac ierr = PetscFEGetNumComponents(fe,&numComp);CHKERRQ(ierr); 111620cf1dd8SToby Isaac ierr = PetscFESetNumComponents(*trFE,numComp);CHKERRQ(ierr); 111720cf1dd8SToby Isaac ierr = PetscFESetBasisSpace(*trFE,bsubsp);CHKERRQ(ierr); 111820cf1dd8SToby Isaac ierr = PetscFESetDualSpace(*trFE,dsubsp);CHKERRQ(ierr); 1119db11e2ebSMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) fe, &name);CHKERRQ(ierr); 1120db11e2ebSMatthew G. Knepley if (name) {ierr = PetscFESetName(*trFE, name);CHKERRQ(ierr);} 112120cf1dd8SToby Isaac ierr = PetscFEGetQuadrature(fe,&fullQuad);CHKERRQ(ierr); 112220cf1dd8SToby Isaac ierr = PetscQuadratureGetOrder(fullQuad,&order);CHKERRQ(ierr); 112320cf1dd8SToby Isaac ierr = DMPlexGetConeSize(dm,refPoint,&coneSize);CHKERRQ(ierr); 112420cf1dd8SToby Isaac if (coneSize == 2 * depth) { 112520cf1dd8SToby Isaac ierr = PetscDTGaussTensorQuadrature(depth,1,(order + 1)/2,-1.,1.,&subQuad);CHKERRQ(ierr); 112620cf1dd8SToby Isaac } else { 1127e6a796c3SToby Isaac ierr = PetscDTStroudConicalQuadrature(depth,1,(order + 1)/2,-1.,1.,&subQuad);CHKERRQ(ierr); 112820cf1dd8SToby Isaac } 112920cf1dd8SToby Isaac ierr = PetscFESetQuadrature(*trFE,subQuad);CHKERRQ(ierr); 113020cf1dd8SToby Isaac ierr = PetscFESetUp(*trFE);CHKERRQ(ierr); 113120cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&subQuad);CHKERRQ(ierr); 113220cf1dd8SToby Isaac ierr = PetscSpaceDestroy(&bsubsp);CHKERRQ(ierr); 113320cf1dd8SToby Isaac PetscFunctionReturn(0); 113420cf1dd8SToby Isaac } 113520cf1dd8SToby Isaac 113620cf1dd8SToby Isaac PetscErrorCode PetscFECreateHeightTrace(PetscFE fe, PetscInt height, PetscFE *trFE) 113720cf1dd8SToby Isaac { 113820cf1dd8SToby Isaac PetscInt hStart, hEnd; 113920cf1dd8SToby Isaac PetscDualSpace dsp; 114020cf1dd8SToby Isaac DM dm; 114120cf1dd8SToby Isaac PetscErrorCode ierr; 114220cf1dd8SToby Isaac 114320cf1dd8SToby Isaac PetscFunctionBegin; 114420cf1dd8SToby Isaac PetscValidHeaderSpecific(fe,PETSCFE_CLASSID,1); 114520cf1dd8SToby Isaac PetscValidPointer(trFE,3); 114620cf1dd8SToby Isaac *trFE = NULL; 114720cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fe,&dsp);CHKERRQ(ierr); 114820cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(dsp,&dm);CHKERRQ(ierr); 114920cf1dd8SToby Isaac ierr = DMPlexGetHeightStratum(dm,height,&hStart,&hEnd);CHKERRQ(ierr); 115020cf1dd8SToby Isaac if (hEnd <= hStart) PetscFunctionReturn(0); 115120cf1dd8SToby Isaac ierr = PetscFECreatePointTrace(fe,hStart,trFE);CHKERRQ(ierr); 115220cf1dd8SToby Isaac PetscFunctionReturn(0); 115320cf1dd8SToby Isaac } 115420cf1dd8SToby Isaac 115520cf1dd8SToby Isaac 115620cf1dd8SToby Isaac /*@ 115720cf1dd8SToby Isaac PetscFEGetDimension - Get the dimension of the finite element space on a cell 115820cf1dd8SToby Isaac 115920cf1dd8SToby Isaac Not collective 116020cf1dd8SToby Isaac 116120cf1dd8SToby Isaac Input Parameter: 116220cf1dd8SToby Isaac . fe - The PetscFE 116320cf1dd8SToby Isaac 116420cf1dd8SToby Isaac Output Parameter: 116520cf1dd8SToby Isaac . dim - The dimension 116620cf1dd8SToby Isaac 116720cf1dd8SToby Isaac Level: intermediate 116820cf1dd8SToby Isaac 116920cf1dd8SToby Isaac .seealso: PetscFECreate(), PetscSpaceGetDimension(), PetscDualSpaceGetDimension() 117020cf1dd8SToby Isaac @*/ 117120cf1dd8SToby Isaac PetscErrorCode PetscFEGetDimension(PetscFE fem, PetscInt *dim) 117220cf1dd8SToby Isaac { 117320cf1dd8SToby Isaac PetscErrorCode ierr; 117420cf1dd8SToby Isaac 117520cf1dd8SToby Isaac PetscFunctionBegin; 117620cf1dd8SToby Isaac PetscValidHeaderSpecific(fem, PETSCFE_CLASSID, 1); 117720cf1dd8SToby Isaac PetscValidPointer(dim, 2); 117820cf1dd8SToby Isaac if (fem->ops->getdimension) {ierr = (*fem->ops->getdimension)(fem, dim);CHKERRQ(ierr);} 117920cf1dd8SToby Isaac PetscFunctionReturn(0); 118020cf1dd8SToby Isaac } 118120cf1dd8SToby Isaac 11824bee2e38SMatthew G. Knepley /*@C 11834bee2e38SMatthew G. Knepley PetscFEPushforward - Map the reference element function to real space 11844bee2e38SMatthew G. Knepley 11854bee2e38SMatthew G. Knepley Input Parameters: 11864bee2e38SMatthew G. Knepley + fe - The PetscFE 11874bee2e38SMatthew G. Knepley . fegeom - The cell geometry 11884bee2e38SMatthew G. Knepley . Nv - The number of function values 11894bee2e38SMatthew G. Knepley - vals - The function values 11904bee2e38SMatthew G. Knepley 11914bee2e38SMatthew G. Knepley Output Parameter: 11924bee2e38SMatthew G. Knepley . vals - The transformed function values 11934bee2e38SMatthew G. Knepley 11944bee2e38SMatthew G. Knepley Level: advanced 11954bee2e38SMatthew G. Knepley 11964bee2e38SMatthew G. Knepley Note: This just forwards the call onto PetscDualSpacePushforward(). 11974bee2e38SMatthew G. Knepley 1198f9244615SMatthew G. Knepley Note: This only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 11992edcad52SToby Isaac 12004bee2e38SMatthew G. Knepley .seealso: PetscDualSpacePushforward() 12014bee2e38SMatthew G. Knepley @*/ 12022edcad52SToby Isaac PetscErrorCode PetscFEPushforward(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 12034bee2e38SMatthew G. Knepley { 12044bee2e38SMatthew G. Knepley PetscErrorCode ierr; 12054bee2e38SMatthew G. Knepley 12062ae266adSMatthew G. Knepley PetscFunctionBeginHot; 12072edcad52SToby Isaac ierr = PetscDualSpacePushforward(fe->dualSpace, fegeom, Nv, fe->numComponents, vals);CHKERRQ(ierr); 12084bee2e38SMatthew G. Knepley PetscFunctionReturn(0); 12094bee2e38SMatthew G. Knepley } 12104bee2e38SMatthew G. Knepley 12114bee2e38SMatthew G. Knepley /*@C 12124bee2e38SMatthew G. Knepley PetscFEPushforwardGradient - Map the reference element function gradient to real space 12134bee2e38SMatthew G. Knepley 12144bee2e38SMatthew G. Knepley Input Parameters: 12154bee2e38SMatthew G. Knepley + fe - The PetscFE 12164bee2e38SMatthew G. Knepley . fegeom - The cell geometry 12174bee2e38SMatthew G. Knepley . Nv - The number of function gradient values 12184bee2e38SMatthew G. Knepley - vals - The function gradient values 12194bee2e38SMatthew G. Knepley 12204bee2e38SMatthew G. Knepley Output Parameter: 12214bee2e38SMatthew G. Knepley . vals - The transformed function gradient values 12224bee2e38SMatthew G. Knepley 12234bee2e38SMatthew G. Knepley Level: advanced 12244bee2e38SMatthew G. Knepley 12254bee2e38SMatthew G. Knepley Note: This just forwards the call onto PetscDualSpacePushforwardGradient(). 12264bee2e38SMatthew G. Knepley 1227f9244615SMatthew G. Knepley Note: This only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 12282edcad52SToby Isaac 12294bee2e38SMatthew G. Knepley .seealso: PetscFEPushforward(), PetscDualSpacePushforwardGradient(), PetscDualSpacePushforward() 12304bee2e38SMatthew G. Knepley @*/ 12312edcad52SToby Isaac PetscErrorCode PetscFEPushforwardGradient(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 12324bee2e38SMatthew G. Knepley { 12334bee2e38SMatthew G. Knepley PetscErrorCode ierr; 12344bee2e38SMatthew G. Knepley 12352ae266adSMatthew G. Knepley PetscFunctionBeginHot; 12362edcad52SToby Isaac ierr = PetscDualSpacePushforwardGradient(fe->dualSpace, fegeom, Nv, fe->numComponents, vals);CHKERRQ(ierr); 12374bee2e38SMatthew G. Knepley PetscFunctionReturn(0); 12384bee2e38SMatthew G. Knepley } 12394bee2e38SMatthew G. Knepley 1240f9244615SMatthew G. Knepley /*@C 1241f9244615SMatthew G. Knepley PetscFEPushforwardHessian - Map the reference element function Hessian to real space 1242f9244615SMatthew G. Knepley 1243f9244615SMatthew G. Knepley Input Parameters: 1244f9244615SMatthew G. Knepley + fe - The PetscFE 1245f9244615SMatthew G. Knepley . fegeom - The cell geometry 1246f9244615SMatthew G. Knepley . Nv - The number of function Hessian values 1247f9244615SMatthew G. Knepley - vals - The function Hessian values 1248f9244615SMatthew G. Knepley 1249f9244615SMatthew G. Knepley Output Parameter: 1250f9244615SMatthew G. Knepley . vals - The transformed function Hessian values 1251f9244615SMatthew G. Knepley 1252f9244615SMatthew G. Knepley Level: advanced 1253f9244615SMatthew G. Knepley 1254f9244615SMatthew G. Knepley Note: This just forwards the call onto PetscDualSpacePushforwardHessian(). 1255f9244615SMatthew G. Knepley 1256f9244615SMatthew G. Knepley Note: This only handles transformations when the embedding dimension of the geometry in fegeom is the same as the reference dimension. 1257f9244615SMatthew G. Knepley 1258f9244615SMatthew G. Knepley .seealso: PetscFEPushforward(), PetscDualSpacePushforwardHessian(), PetscDualSpacePushforward() 1259f9244615SMatthew G. Knepley @*/ 1260f9244615SMatthew G. Knepley PetscErrorCode PetscFEPushforwardHessian(PetscFE fe, PetscFEGeom *fegeom, PetscInt Nv, PetscScalar vals[]) 1261f9244615SMatthew G. Knepley { 1262f9244615SMatthew G. Knepley PetscErrorCode ierr; 1263f9244615SMatthew G. Knepley 1264f9244615SMatthew G. Knepley PetscFunctionBeginHot; 1265f9244615SMatthew G. Knepley ierr = PetscDualSpacePushforwardHessian(fe->dualSpace, fegeom, Nv, fe->numComponents, vals);CHKERRQ(ierr); 1266f9244615SMatthew G. Knepley PetscFunctionReturn(0); 1267f9244615SMatthew G. Knepley } 1268f9244615SMatthew G. Knepley 126920cf1dd8SToby Isaac /* 127020cf1dd8SToby Isaac Purpose: Compute element vector for chunk of elements 127120cf1dd8SToby Isaac 127220cf1dd8SToby Isaac Input: 127320cf1dd8SToby Isaac Sizes: 127420cf1dd8SToby Isaac Ne: number of elements 127520cf1dd8SToby Isaac Nf: number of fields 127620cf1dd8SToby Isaac PetscFE 127720cf1dd8SToby Isaac dim: spatial dimension 127820cf1dd8SToby Isaac Nb: number of basis functions 127920cf1dd8SToby Isaac Nc: number of field components 128020cf1dd8SToby Isaac PetscQuadrature 128120cf1dd8SToby Isaac Nq: number of quadrature points 128220cf1dd8SToby Isaac 128320cf1dd8SToby Isaac Geometry: 128420cf1dd8SToby Isaac PetscFEGeom[Ne] possibly *Nq 128520cf1dd8SToby Isaac PetscReal v0s[dim] 128620cf1dd8SToby Isaac PetscReal n[dim] 128720cf1dd8SToby Isaac PetscReal jacobians[dim*dim] 128820cf1dd8SToby Isaac PetscReal jacobianInverses[dim*dim] 128920cf1dd8SToby Isaac PetscReal jacobianDeterminants 129020cf1dd8SToby Isaac FEM: 129120cf1dd8SToby Isaac PetscFE 129220cf1dd8SToby Isaac PetscQuadrature 129320cf1dd8SToby Isaac PetscReal quadPoints[Nq*dim] 129420cf1dd8SToby Isaac PetscReal quadWeights[Nq] 129520cf1dd8SToby Isaac PetscReal basis[Nq*Nb*Nc] 129620cf1dd8SToby Isaac PetscReal basisDer[Nq*Nb*Nc*dim] 129720cf1dd8SToby Isaac PetscScalar coefficients[Ne*Nb*Nc] 129820cf1dd8SToby Isaac PetscScalar elemVec[Ne*Nb*Nc] 129920cf1dd8SToby Isaac 130020cf1dd8SToby Isaac Problem: 130120cf1dd8SToby Isaac PetscInt f: the active field 130220cf1dd8SToby Isaac f0, f1 130320cf1dd8SToby Isaac 130420cf1dd8SToby Isaac Work Space: 130520cf1dd8SToby Isaac PetscFE 130620cf1dd8SToby Isaac PetscScalar f0[Nq*dim]; 130720cf1dd8SToby Isaac PetscScalar f1[Nq*dim*dim]; 130820cf1dd8SToby Isaac PetscScalar u[Nc]; 130920cf1dd8SToby Isaac PetscScalar gradU[Nc*dim]; 131020cf1dd8SToby Isaac PetscReal x[dim]; 131120cf1dd8SToby Isaac PetscScalar realSpaceDer[dim]; 131220cf1dd8SToby Isaac 131320cf1dd8SToby Isaac Purpose: Compute element vector for N_cb batches of elements 131420cf1dd8SToby Isaac 131520cf1dd8SToby Isaac Input: 131620cf1dd8SToby Isaac Sizes: 131720cf1dd8SToby Isaac N_cb: Number of serial cell batches 131820cf1dd8SToby Isaac 131920cf1dd8SToby Isaac Geometry: 132020cf1dd8SToby Isaac PetscReal v0s[Ne*dim] 132120cf1dd8SToby Isaac PetscReal jacobians[Ne*dim*dim] possibly *Nq 132220cf1dd8SToby Isaac PetscReal jacobianInverses[Ne*dim*dim] possibly *Nq 132320cf1dd8SToby Isaac PetscReal jacobianDeterminants[Ne] possibly *Nq 132420cf1dd8SToby Isaac FEM: 132520cf1dd8SToby Isaac static PetscReal quadPoints[Nq*dim] 132620cf1dd8SToby Isaac static PetscReal quadWeights[Nq] 132720cf1dd8SToby Isaac static PetscReal basis[Nq*Nb*Nc] 132820cf1dd8SToby Isaac static PetscReal basisDer[Nq*Nb*Nc*dim] 132920cf1dd8SToby Isaac PetscScalar coefficients[Ne*Nb*Nc] 133020cf1dd8SToby Isaac PetscScalar elemVec[Ne*Nb*Nc] 133120cf1dd8SToby Isaac 133220cf1dd8SToby Isaac ex62.c: 133320cf1dd8SToby Isaac PetscErrorCode PetscFEIntegrateResidualBatch(PetscInt Ne, PetscInt numFields, PetscInt field, PetscQuadrature quad[], const PetscScalar coefficients[], 133420cf1dd8SToby Isaac const PetscReal v0s[], const PetscReal jacobians[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], 133520cf1dd8SToby Isaac void (*f0_func)(const PetscScalar u[], const PetscScalar gradU[], const PetscReal x[], PetscScalar f0[]), 133620cf1dd8SToby Isaac void (*f1_func)(const PetscScalar u[], const PetscScalar gradU[], const PetscReal x[], PetscScalar f1[]), PetscScalar elemVec[]) 133720cf1dd8SToby Isaac 133820cf1dd8SToby Isaac ex52.c: 133920cf1dd8SToby Isaac PetscErrorCode IntegrateLaplacianBatchCPU(PetscInt Ne, PetscInt Nb, const PetscScalar coefficients[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscInt Nq, const PetscReal quadPoints[], const PetscReal quadWeights[], const PetscReal basisTabulation[], const PetscReal basisDerTabulation[], PetscScalar elemVec[], AppCtx *user) 134020cf1dd8SToby Isaac PetscErrorCode IntegrateElasticityBatchCPU(PetscInt Ne, PetscInt Nb, PetscInt Ncomp, const PetscScalar coefficients[], const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscInt Nq, const PetscReal quadPoints[], const PetscReal quadWeights[], const PetscReal basisTabulation[], const PetscReal basisDerTabulation[], PetscScalar elemVec[], AppCtx *user) 134120cf1dd8SToby Isaac 134220cf1dd8SToby Isaac ex52_integrateElement.cu 134320cf1dd8SToby Isaac __global__ void integrateElementQuadrature(int N_cb, realType *coefficients, realType *jacobianInverses, realType *jacobianDeterminants, realType *elemVec) 134420cf1dd8SToby Isaac 134520cf1dd8SToby Isaac PETSC_EXTERN PetscErrorCode IntegrateElementBatchGPU(PetscInt spatial_dim, PetscInt Ne, PetscInt Ncb, PetscInt Nbc, PetscInt Nbl, const PetscScalar coefficients[], 134620cf1dd8SToby Isaac const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscScalar elemVec[], 134720cf1dd8SToby Isaac PetscLogEvent event, PetscInt debug, PetscInt pde_op) 134820cf1dd8SToby Isaac 134920cf1dd8SToby Isaac ex52_integrateElementOpenCL.c: 135020cf1dd8SToby Isaac PETSC_EXTERN PetscErrorCode IntegrateElementBatchGPU(PetscInt spatial_dim, PetscInt Ne, PetscInt Ncb, PetscInt Nbc, PetscInt N_bl, const PetscScalar coefficients[], 135120cf1dd8SToby Isaac const PetscReal jacobianInverses[], const PetscReal jacobianDeterminants[], PetscScalar elemVec[], 135220cf1dd8SToby Isaac PetscLogEvent event, PetscInt debug, PetscInt pde_op) 135320cf1dd8SToby Isaac 135420cf1dd8SToby Isaac __kernel void integrateElementQuadrature(int N_cb, __global float *coefficients, __global float *jacobianInverses, __global float *jacobianDeterminants, __global float *elemVec) 135520cf1dd8SToby Isaac */ 135620cf1dd8SToby Isaac 135720cf1dd8SToby Isaac /*@C 135820cf1dd8SToby Isaac PetscFEIntegrate - Produce the integral for the given field for a chunk of elements by quadrature integration 135920cf1dd8SToby Isaac 136020cf1dd8SToby Isaac Not collective 136120cf1dd8SToby Isaac 136220cf1dd8SToby Isaac Input Parameters: 1363360cf244SMatthew G. Knepley + prob - The PetscDS specifying the discretizations and continuum functions 136420cf1dd8SToby Isaac . field - The field being integrated 136520cf1dd8SToby Isaac . Ne - The number of elements in the chunk 136620cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 136720cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 136820cf1dd8SToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 136920cf1dd8SToby Isaac - coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 137020cf1dd8SToby Isaac 13717a7aea1fSJed Brown Output Parameter: 137220cf1dd8SToby Isaac . integral - the integral for this field 137320cf1dd8SToby Isaac 13742b99622eSMatthew G. Knepley Level: intermediate 137520cf1dd8SToby Isaac 137620cf1dd8SToby Isaac .seealso: PetscFEIntegrateResidual() 137720cf1dd8SToby Isaac @*/ 13784bee2e38SMatthew G. Knepley PetscErrorCode PetscFEIntegrate(PetscDS prob, PetscInt field, PetscInt Ne, PetscFEGeom *cgeom, 137920cf1dd8SToby Isaac const PetscScalar coefficients[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscScalar integral[]) 138020cf1dd8SToby Isaac { 13814bee2e38SMatthew G. Knepley PetscFE fe; 138220cf1dd8SToby Isaac PetscErrorCode ierr; 138320cf1dd8SToby Isaac 138420cf1dd8SToby Isaac PetscFunctionBegin; 13854bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 13864bee2e38SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr); 13874bee2e38SMatthew G. Knepley if (fe->ops->integrate) {ierr = (*fe->ops->integrate)(prob, field, Ne, cgeom, coefficients, probAux, coefficientsAux, integral);CHKERRQ(ierr);} 138820cf1dd8SToby Isaac PetscFunctionReturn(0); 138920cf1dd8SToby Isaac } 139020cf1dd8SToby Isaac 139120cf1dd8SToby Isaac /*@C 1392afe6d6adSToby Isaac PetscFEIntegrateBd - Produce the integral for the given field for a chunk of elements by quadrature integration 1393afe6d6adSToby Isaac 1394afe6d6adSToby Isaac Not collective 1395afe6d6adSToby Isaac 1396afe6d6adSToby Isaac Input Parameters: 1397360cf244SMatthew G. Knepley + prob - The PetscDS specifying the discretizations and continuum functions 1398afe6d6adSToby Isaac . field - The field being integrated 1399afe6d6adSToby Isaac . obj_func - The function to be integrated 1400afe6d6adSToby Isaac . Ne - The number of elements in the chunk 1401afe6d6adSToby Isaac . fgeom - The face geometry for each face in the chunk 1402afe6d6adSToby Isaac . coefficients - The array of FEM basis coefficients for the elements 1403afe6d6adSToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 1404afe6d6adSToby Isaac - coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 1405afe6d6adSToby Isaac 14067a7aea1fSJed Brown Output Parameter: 1407afe6d6adSToby Isaac . integral - the integral for this field 1408afe6d6adSToby Isaac 14092b99622eSMatthew G. Knepley Level: intermediate 1410afe6d6adSToby Isaac 1411afe6d6adSToby Isaac .seealso: PetscFEIntegrateResidual() 1412afe6d6adSToby Isaac @*/ 14134bee2e38SMatthew G. Knepley PetscErrorCode PetscFEIntegrateBd(PetscDS prob, PetscInt field, 1414afe6d6adSToby Isaac void (*obj_func)(PetscInt, PetscInt, PetscInt, 1415afe6d6adSToby Isaac const PetscInt[], const PetscInt[], const PetscScalar[], const PetscScalar[], const PetscScalar[], 1416afe6d6adSToby Isaac const PetscInt[], const PetscInt[], const PetscScalar[], const PetscScalar[], const PetscScalar[], 1417afe6d6adSToby Isaac PetscReal, const PetscReal[], const PetscReal[], PetscInt, const PetscScalar[], PetscScalar[]), 1418afe6d6adSToby Isaac PetscInt Ne, PetscFEGeom *geom, const PetscScalar coefficients[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscScalar integral[]) 1419afe6d6adSToby Isaac { 14204bee2e38SMatthew G. Knepley PetscFE fe; 1421afe6d6adSToby Isaac PetscErrorCode ierr; 1422afe6d6adSToby Isaac 1423afe6d6adSToby Isaac PetscFunctionBegin; 14244bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 14254bee2e38SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr); 14264bee2e38SMatthew G. Knepley if (fe->ops->integratebd) {ierr = (*fe->ops->integratebd)(prob, field, obj_func, Ne, geom, coefficients, probAux, coefficientsAux, integral);CHKERRQ(ierr);} 1427afe6d6adSToby Isaac PetscFunctionReturn(0); 1428afe6d6adSToby Isaac } 1429afe6d6adSToby Isaac 1430afe6d6adSToby Isaac /*@C 143120cf1dd8SToby Isaac PetscFEIntegrateResidual - Produce the element residual vector for a chunk of elements by quadrature integration 143220cf1dd8SToby Isaac 143320cf1dd8SToby Isaac Not collective 143420cf1dd8SToby Isaac 143520cf1dd8SToby Isaac Input Parameters: 14366528b96dSMatthew G. Knepley + ds - The PetscDS specifying the discretizations and continuum functions 14376528b96dSMatthew G. Knepley . key - The (label+value, field) being integrated 143820cf1dd8SToby Isaac . Ne - The number of elements in the chunk 143920cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 144020cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 144120cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 144220cf1dd8SToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 144320cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 144420cf1dd8SToby Isaac - t - The time 144520cf1dd8SToby Isaac 14467a7aea1fSJed Brown Output Parameter: 144720cf1dd8SToby Isaac . elemVec - the element residual vectors from each element 144820cf1dd8SToby Isaac 144920cf1dd8SToby Isaac Note: 145020cf1dd8SToby Isaac $ Loop over batch of elements (e): 145120cf1dd8SToby Isaac $ Loop over quadrature points (q): 145220cf1dd8SToby Isaac $ Make u_q and gradU_q (loops over fields,Nb,Ncomp) and x_q 145320cf1dd8SToby Isaac $ Call f_0 and f_1 145420cf1dd8SToby Isaac $ Loop over element vector entries (f,fc --> i): 145520cf1dd8SToby Isaac $ elemVec[i] += \psi^{fc}_f(q) f0_{fc}(u, \nabla u) + \nabla\psi^{fc}_f(q) \cdot f1_{fc,df}(u, \nabla u) 145620cf1dd8SToby Isaac 14572b99622eSMatthew G. Knepley Level: intermediate 145820cf1dd8SToby Isaac 145920cf1dd8SToby Isaac .seealso: PetscFEIntegrateResidual() 146020cf1dd8SToby Isaac @*/ 14616528b96dSMatthew G. Knepley PetscErrorCode PetscFEIntegrateResidual(PetscDS ds, PetscHashFormKey key, PetscInt Ne, PetscFEGeom *cgeom, 146220cf1dd8SToby Isaac const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 146320cf1dd8SToby Isaac { 14644bee2e38SMatthew G. Knepley PetscFE fe; 146520cf1dd8SToby Isaac PetscErrorCode ierr; 146620cf1dd8SToby Isaac 14676528b96dSMatthew G. Knepley PetscFunctionBeginHot; 14686528b96dSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 14696528b96dSMatthew G. Knepley ierr = PetscDSGetDiscretization(ds, key.field, (PetscObject *) &fe);CHKERRQ(ierr); 14706528b96dSMatthew G. Knepley if (fe->ops->integrateresidual) {ierr = (*fe->ops->integrateresidual)(ds, key, Ne, cgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec);CHKERRQ(ierr);} 147120cf1dd8SToby Isaac PetscFunctionReturn(0); 147220cf1dd8SToby Isaac } 147320cf1dd8SToby Isaac 147420cf1dd8SToby Isaac /*@C 147520cf1dd8SToby Isaac PetscFEIntegrateBdResidual - Produce the element residual vector for a chunk of elements by quadrature integration over a boundary 147620cf1dd8SToby Isaac 147720cf1dd8SToby Isaac Not collective 147820cf1dd8SToby Isaac 147920cf1dd8SToby Isaac Input Parameters: 1480360cf244SMatthew G. Knepley + prob - The PetscDS specifying the discretizations and continuum functions 148120cf1dd8SToby Isaac . field - The field being integrated 148220cf1dd8SToby Isaac . Ne - The number of elements in the chunk 148320cf1dd8SToby Isaac . fgeom - The face geometry for each cell in the chunk 148420cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements 148520cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 148620cf1dd8SToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 148720cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 148820cf1dd8SToby Isaac - t - The time 148920cf1dd8SToby Isaac 14907a7aea1fSJed Brown Output Parameter: 149120cf1dd8SToby Isaac . elemVec - the element residual vectors from each element 149220cf1dd8SToby Isaac 14932b99622eSMatthew G. Knepley Level: intermediate 149420cf1dd8SToby Isaac 149520cf1dd8SToby Isaac .seealso: PetscFEIntegrateResidual() 149620cf1dd8SToby Isaac @*/ 14974bee2e38SMatthew G. Knepley PetscErrorCode PetscFEIntegrateBdResidual(PetscDS prob, PetscInt field, PetscInt Ne, PetscFEGeom *fgeom, 149820cf1dd8SToby Isaac const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 149920cf1dd8SToby Isaac { 15004bee2e38SMatthew G. Knepley PetscFE fe; 150120cf1dd8SToby Isaac PetscErrorCode ierr; 150220cf1dd8SToby Isaac 150320cf1dd8SToby Isaac PetscFunctionBegin; 15044bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 15054bee2e38SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr); 15064bee2e38SMatthew G. Knepley if (fe->ops->integratebdresidual) {ierr = (*fe->ops->integratebdresidual)(prob, field, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec);CHKERRQ(ierr);} 150720cf1dd8SToby Isaac PetscFunctionReturn(0); 150820cf1dd8SToby Isaac } 150920cf1dd8SToby Isaac 151020cf1dd8SToby Isaac /*@C 151127f02ce8SMatthew G. Knepley PetscFEIntegrateHybridResidual - Produce the element residual vector for a chunk of hybrid element faces by quadrature integration 151227f02ce8SMatthew G. Knepley 151327f02ce8SMatthew G. Knepley Not collective 151427f02ce8SMatthew G. Knepley 151527f02ce8SMatthew G. Knepley Input Parameters: 151627f02ce8SMatthew G. Knepley + prob - The PetscDS specifying the discretizations and continuum functions 15176528b96dSMatthew G. Knepley . key - The (label+value, field) being integrated 151827f02ce8SMatthew G. Knepley . Ne - The number of elements in the chunk 151927f02ce8SMatthew G. Knepley . fgeom - The face geometry for each cell in the chunk 152027f02ce8SMatthew G. Knepley . coefficients - The array of FEM basis coefficients for the elements 152127f02ce8SMatthew G. Knepley . coefficients_t - The array of FEM basis time derivative coefficients for the elements 152227f02ce8SMatthew G. Knepley . probAux - The PetscDS specifying the auxiliary discretizations 152327f02ce8SMatthew G. Knepley . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 152427f02ce8SMatthew G. Knepley - t - The time 152527f02ce8SMatthew G. Knepley 152627f02ce8SMatthew G. Knepley Output Parameter 152727f02ce8SMatthew G. Knepley . elemVec - the element residual vectors from each element 152827f02ce8SMatthew G. Knepley 152927f02ce8SMatthew G. Knepley Level: developer 153027f02ce8SMatthew G. Knepley 153127f02ce8SMatthew G. Knepley .seealso: PetscFEIntegrateResidual() 153227f02ce8SMatthew G. Knepley @*/ 15336528b96dSMatthew G. Knepley PetscErrorCode PetscFEIntegrateHybridResidual(PetscDS prob, PetscHashFormKey key, PetscInt Ne, PetscFEGeom *fgeom, 153427f02ce8SMatthew G. Knepley const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscScalar elemVec[]) 153527f02ce8SMatthew G. Knepley { 153627f02ce8SMatthew G. Knepley PetscFE fe; 153727f02ce8SMatthew G. Knepley PetscErrorCode ierr; 153827f02ce8SMatthew G. Knepley 153927f02ce8SMatthew G. Knepley PetscFunctionBegin; 154027f02ce8SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 15416528b96dSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, key.field, (PetscObject *) &fe);CHKERRQ(ierr); 15426528b96dSMatthew G. Knepley if (fe->ops->integratehybridresidual) {ierr = (*fe->ops->integratehybridresidual)(prob, key, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, elemVec);CHKERRQ(ierr);} 154327f02ce8SMatthew G. Knepley PetscFunctionReturn(0); 154427f02ce8SMatthew G. Knepley } 154527f02ce8SMatthew G. Knepley 154627f02ce8SMatthew G. Knepley /*@C 154720cf1dd8SToby Isaac PetscFEIntegrateJacobian - Produce the element Jacobian for a chunk of elements by quadrature integration 154820cf1dd8SToby Isaac 154920cf1dd8SToby Isaac Not collective 155020cf1dd8SToby Isaac 155120cf1dd8SToby Isaac Input Parameters: 15526528b96dSMatthew G. Knepley + ds - The PetscDS specifying the discretizations and continuum functions 155320cf1dd8SToby Isaac . jtype - The type of matrix pointwise functions that should be used 15546528b96dSMatthew G. Knepley . key - The (label+value, fieldI*Nf + fieldJ) being integrated 155520cf1dd8SToby Isaac . Ne - The number of elements in the chunk 155620cf1dd8SToby Isaac . cgeom - The cell geometry for each cell in the chunk 155720cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 155820cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 155920cf1dd8SToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 156020cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 156120cf1dd8SToby Isaac . t - The time 156220cf1dd8SToby Isaac - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 156320cf1dd8SToby Isaac 15647a7aea1fSJed Brown Output Parameter: 156520cf1dd8SToby Isaac . elemMat - the element matrices for the Jacobian from each element 156620cf1dd8SToby Isaac 156720cf1dd8SToby Isaac Note: 156820cf1dd8SToby Isaac $ Loop over batch of elements (e): 156920cf1dd8SToby Isaac $ Loop over element matrix entries (f,fc,g,gc --> i,j): 157020cf1dd8SToby Isaac $ Loop over quadrature points (q): 157120cf1dd8SToby Isaac $ Make u_q and gradU_q (loops over fields,Nb,Ncomp) 157220cf1dd8SToby Isaac $ elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 157320cf1dd8SToby Isaac $ + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 157420cf1dd8SToby Isaac $ + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 157520cf1dd8SToby Isaac $ + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 15762b99622eSMatthew G. Knepley Level: intermediate 157720cf1dd8SToby Isaac 157820cf1dd8SToby Isaac .seealso: PetscFEIntegrateResidual() 157920cf1dd8SToby Isaac @*/ 15806528b96dSMatthew G. Knepley PetscErrorCode PetscFEIntegrateJacobian(PetscDS ds, PetscFEJacobianType jtype, PetscHashFormKey key, PetscInt Ne, PetscFEGeom *cgeom, 158120cf1dd8SToby Isaac const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 158220cf1dd8SToby Isaac { 15834bee2e38SMatthew G. Knepley PetscFE fe; 15846528b96dSMatthew G. Knepley PetscInt Nf; 158520cf1dd8SToby Isaac PetscErrorCode ierr; 158620cf1dd8SToby Isaac 158720cf1dd8SToby Isaac PetscFunctionBegin; 15886528b96dSMatthew G. Knepley PetscValidHeaderSpecific(ds, PETSCDS_CLASSID, 1); 15896528b96dSMatthew G. Knepley ierr = PetscDSGetNumFields(ds, &Nf);CHKERRQ(ierr); 15906528b96dSMatthew G. Knepley ierr = PetscDSGetDiscretization(ds, key.field / Nf, (PetscObject *) &fe);CHKERRQ(ierr); 15916528b96dSMatthew G. Knepley if (fe->ops->integratejacobian) {ierr = (*fe->ops->integratejacobian)(ds, jtype, key, Ne, cgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat);CHKERRQ(ierr);} 159220cf1dd8SToby Isaac PetscFunctionReturn(0); 159320cf1dd8SToby Isaac } 159420cf1dd8SToby Isaac 159520cf1dd8SToby Isaac /*@C 159620cf1dd8SToby Isaac PetscFEIntegrateBdJacobian - Produce the boundary element Jacobian for a chunk of elements by quadrature integration 159720cf1dd8SToby Isaac 159820cf1dd8SToby Isaac Not collective 159920cf1dd8SToby Isaac 160020cf1dd8SToby Isaac Input Parameters: 1601f0fc11ceSJed Brown + prob - The PetscDS specifying the discretizations and continuum functions 160220cf1dd8SToby Isaac . fieldI - The test field being integrated 160320cf1dd8SToby Isaac . fieldJ - The basis field being integrated 160420cf1dd8SToby Isaac . Ne - The number of elements in the chunk 160520cf1dd8SToby Isaac . fgeom - The face geometry for each cell in the chunk 160620cf1dd8SToby Isaac . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 160720cf1dd8SToby Isaac . coefficients_t - The array of FEM basis time derivative coefficients for the elements 160820cf1dd8SToby Isaac . probAux - The PetscDS specifying the auxiliary discretizations 160920cf1dd8SToby Isaac . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 161020cf1dd8SToby Isaac . t - The time 161120cf1dd8SToby Isaac - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 161220cf1dd8SToby Isaac 16137a7aea1fSJed Brown Output Parameter: 161420cf1dd8SToby Isaac . elemMat - the element matrices for the Jacobian from each element 161520cf1dd8SToby Isaac 161620cf1dd8SToby Isaac Note: 161720cf1dd8SToby Isaac $ Loop over batch of elements (e): 161820cf1dd8SToby Isaac $ Loop over element matrix entries (f,fc,g,gc --> i,j): 161920cf1dd8SToby Isaac $ Loop over quadrature points (q): 162020cf1dd8SToby Isaac $ Make u_q and gradU_q (loops over fields,Nb,Ncomp) 162120cf1dd8SToby Isaac $ elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 162220cf1dd8SToby Isaac $ + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 162320cf1dd8SToby Isaac $ + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 162420cf1dd8SToby Isaac $ + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 16252b99622eSMatthew G. Knepley Level: intermediate 162620cf1dd8SToby Isaac 162720cf1dd8SToby Isaac .seealso: PetscFEIntegrateJacobian(), PetscFEIntegrateResidual() 162820cf1dd8SToby Isaac @*/ 16294bee2e38SMatthew G. Knepley PetscErrorCode PetscFEIntegrateBdJacobian(PetscDS prob, PetscInt fieldI, PetscInt fieldJ, PetscInt Ne, PetscFEGeom *fgeom, 163020cf1dd8SToby Isaac const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 163120cf1dd8SToby Isaac { 16324bee2e38SMatthew G. Knepley PetscFE fe; 163320cf1dd8SToby Isaac PetscErrorCode ierr; 163420cf1dd8SToby Isaac 163520cf1dd8SToby Isaac PetscFunctionBegin; 16364bee2e38SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 16374bee2e38SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr); 16384bee2e38SMatthew G. Knepley if (fe->ops->integratebdjacobian) {ierr = (*fe->ops->integratebdjacobian)(prob, fieldI, fieldJ, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat);CHKERRQ(ierr);} 163920cf1dd8SToby Isaac PetscFunctionReturn(0); 164020cf1dd8SToby Isaac } 164120cf1dd8SToby Isaac 164227f02ce8SMatthew G. Knepley /*@C 164327f02ce8SMatthew G. Knepley PetscFEIntegrateHybridJacobian - Produce the boundary element Jacobian for a chunk of hybrid elements by quadrature integration 164427f02ce8SMatthew G. Knepley 164527f02ce8SMatthew G. Knepley Not collective 164627f02ce8SMatthew G. Knepley 164727f02ce8SMatthew G. Knepley Input Parameters: 1648ee300463SSatish Balay + prob - The PetscDS specifying the discretizations and continuum functions 164927f02ce8SMatthew G. Knepley . jtype - The type of matrix pointwise functions that should be used 165027f02ce8SMatthew G. Knepley . fieldI - The test field being integrated 165127f02ce8SMatthew G. Knepley . fieldJ - The basis field being integrated 165227f02ce8SMatthew G. Knepley . Ne - The number of elements in the chunk 165327f02ce8SMatthew G. Knepley . fgeom - The face geometry for each cell in the chunk 165427f02ce8SMatthew G. Knepley . coefficients - The array of FEM basis coefficients for the elements for the Jacobian evaluation point 165527f02ce8SMatthew G. Knepley . coefficients_t - The array of FEM basis time derivative coefficients for the elements 165627f02ce8SMatthew G. Knepley . probAux - The PetscDS specifying the auxiliary discretizations 165727f02ce8SMatthew G. Knepley . coefficientsAux - The array of FEM auxiliary basis coefficients for the elements 165827f02ce8SMatthew G. Knepley . t - The time 165927f02ce8SMatthew G. Knepley - u_tShift - A multiplier for the dF/du_t term (as opposed to the dF/du term) 166027f02ce8SMatthew G. Knepley 166127f02ce8SMatthew G. Knepley Output Parameter 166227f02ce8SMatthew G. Knepley . elemMat - the element matrices for the Jacobian from each element 166327f02ce8SMatthew G. Knepley 166427f02ce8SMatthew G. Knepley Note: 166527f02ce8SMatthew G. Knepley $ Loop over batch of elements (e): 166627f02ce8SMatthew G. Knepley $ Loop over element matrix entries (f,fc,g,gc --> i,j): 166727f02ce8SMatthew G. Knepley $ Loop over quadrature points (q): 166827f02ce8SMatthew G. Knepley $ Make u_q and gradU_q (loops over fields,Nb,Ncomp) 166927f02ce8SMatthew G. Knepley $ elemMat[i,j] += \psi^{fc}_f(q) g0_{fc,gc}(u, \nabla u) \phi^{gc}_g(q) 167027f02ce8SMatthew G. Knepley $ + \psi^{fc}_f(q) \cdot g1_{fc,gc,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 167127f02ce8SMatthew G. Knepley $ + \nabla\psi^{fc}_f(q) \cdot g2_{fc,gc,df}(u, \nabla u) \phi^{gc}_g(q) 167227f02ce8SMatthew G. Knepley $ + \nabla\psi^{fc}_f(q) \cdot g3_{fc,gc,df,dg}(u, \nabla u) \nabla\phi^{gc}_g(q) 167327f02ce8SMatthew G. Knepley Level: developer 167427f02ce8SMatthew G. Knepley 167527f02ce8SMatthew G. Knepley .seealso: PetscFEIntegrateJacobian(), PetscFEIntegrateResidual() 167627f02ce8SMatthew G. Knepley @*/ 167727f02ce8SMatthew G. Knepley PetscErrorCode PetscFEIntegrateHybridJacobian(PetscDS prob, PetscFEJacobianType jtype, PetscInt fieldI, PetscInt fieldJ, PetscInt Ne, PetscFEGeom *fgeom, 167827f02ce8SMatthew G. Knepley const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscDS probAux, const PetscScalar coefficientsAux[], PetscReal t, PetscReal u_tshift, PetscScalar elemMat[]) 167927f02ce8SMatthew G. Knepley { 168027f02ce8SMatthew G. Knepley PetscFE fe; 168127f02ce8SMatthew G. Knepley PetscErrorCode ierr; 168227f02ce8SMatthew G. Knepley 168327f02ce8SMatthew G. Knepley PetscFunctionBegin; 168427f02ce8SMatthew G. Knepley PetscValidHeaderSpecific(prob, PETSCDS_CLASSID, 1); 168527f02ce8SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr); 168627f02ce8SMatthew G. Knepley if (fe->ops->integratehybridjacobian) {ierr = (*fe->ops->integratehybridjacobian)(prob, jtype, fieldI, fieldJ, Ne, fgeom, coefficients, coefficients_t, probAux, coefficientsAux, t, u_tshift, elemMat);CHKERRQ(ierr);} 168727f02ce8SMatthew G. Knepley PetscFunctionReturn(0); 168827f02ce8SMatthew G. Knepley } 168927f02ce8SMatthew G. Knepley 16902b99622eSMatthew G. Knepley /*@ 16912b99622eSMatthew G. Knepley PetscFEGetHeightSubspace - Get the subspace of this space for a mesh point of a given height 16922b99622eSMatthew G. Knepley 16932b99622eSMatthew G. Knepley Input Parameters: 16942b99622eSMatthew G. Knepley + fe - The finite element space 16952b99622eSMatthew G. Knepley - height - The height of the Plex point 16962b99622eSMatthew G. Knepley 16972b99622eSMatthew G. Knepley Output Parameter: 16982b99622eSMatthew G. Knepley . subfe - The subspace of this FE space 16992b99622eSMatthew G. Knepley 17002b99622eSMatthew G. Knepley Note: For example, if we want the subspace of this space for a face, we would choose height = 1. 17012b99622eSMatthew G. Knepley 17022b99622eSMatthew G. Knepley Level: advanced 17032b99622eSMatthew G. Knepley 17042b99622eSMatthew G. Knepley .seealso: PetscFECreateDefault() 17052b99622eSMatthew G. Knepley @*/ 170620cf1dd8SToby Isaac PetscErrorCode PetscFEGetHeightSubspace(PetscFE fe, PetscInt height, PetscFE *subfe) 170720cf1dd8SToby Isaac { 170820cf1dd8SToby Isaac PetscSpace P, subP; 170920cf1dd8SToby Isaac PetscDualSpace Q, subQ; 171020cf1dd8SToby Isaac PetscQuadrature subq; 171120cf1dd8SToby Isaac PetscFEType fetype; 171220cf1dd8SToby Isaac PetscInt dim, Nc; 171320cf1dd8SToby Isaac PetscErrorCode ierr; 171420cf1dd8SToby Isaac 171520cf1dd8SToby Isaac PetscFunctionBegin; 171620cf1dd8SToby Isaac PetscValidHeaderSpecific(fe, PETSCFE_CLASSID, 1); 171720cf1dd8SToby Isaac PetscValidPointer(subfe, 3); 171820cf1dd8SToby Isaac if (height == 0) { 171920cf1dd8SToby Isaac *subfe = fe; 172020cf1dd8SToby Isaac PetscFunctionReturn(0); 172120cf1dd8SToby Isaac } 172220cf1dd8SToby Isaac ierr = PetscFEGetBasisSpace(fe, &P);CHKERRQ(ierr); 172320cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fe, &Q);CHKERRQ(ierr); 172420cf1dd8SToby Isaac ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 172520cf1dd8SToby Isaac ierr = PetscFEGetFaceQuadrature(fe, &subq);CHKERRQ(ierr); 172620cf1dd8SToby Isaac ierr = PetscDualSpaceGetDimension(Q, &dim);CHKERRQ(ierr); 17272da392ccSBarry Smith if (height > dim || height < 0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Asked for space at height %D for dimension %D space", height, dim); 172820cf1dd8SToby Isaac if (!fe->subspaces) {ierr = PetscCalloc1(dim, &fe->subspaces);CHKERRQ(ierr);} 172920cf1dd8SToby Isaac if (height <= dim) { 173020cf1dd8SToby Isaac if (!fe->subspaces[height-1]) { 1731665f567fSMatthew G. Knepley PetscFE sub = NULL; 17323f6b16c7SMatthew G. Knepley const char *name; 173320cf1dd8SToby Isaac 173420cf1dd8SToby Isaac ierr = PetscSpaceGetHeightSubspace(P, height, &subP);CHKERRQ(ierr); 173520cf1dd8SToby Isaac ierr = PetscDualSpaceGetHeightSubspace(Q, height, &subQ);CHKERRQ(ierr); 1736665f567fSMatthew G. Knepley if (subQ) { 173720cf1dd8SToby Isaac ierr = PetscFECreate(PetscObjectComm((PetscObject) fe), &sub);CHKERRQ(ierr); 17383f6b16c7SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) fe, &name);CHKERRQ(ierr); 17393f6b16c7SMatthew G. Knepley ierr = PetscObjectSetName((PetscObject) sub, name);CHKERRQ(ierr); 174020cf1dd8SToby Isaac ierr = PetscFEGetType(fe, &fetype);CHKERRQ(ierr); 174120cf1dd8SToby Isaac ierr = PetscFESetType(sub, fetype);CHKERRQ(ierr); 174220cf1dd8SToby Isaac ierr = PetscFESetBasisSpace(sub, subP);CHKERRQ(ierr); 174320cf1dd8SToby Isaac ierr = PetscFESetDualSpace(sub, subQ);CHKERRQ(ierr); 174420cf1dd8SToby Isaac ierr = PetscFESetNumComponents(sub, Nc);CHKERRQ(ierr); 174520cf1dd8SToby Isaac ierr = PetscFESetUp(sub);CHKERRQ(ierr); 174620cf1dd8SToby Isaac ierr = PetscFESetQuadrature(sub, subq);CHKERRQ(ierr); 1747665f567fSMatthew G. Knepley } 174820cf1dd8SToby Isaac fe->subspaces[height-1] = sub; 174920cf1dd8SToby Isaac } 175020cf1dd8SToby Isaac *subfe = fe->subspaces[height-1]; 175120cf1dd8SToby Isaac } else { 175220cf1dd8SToby Isaac *subfe = NULL; 175320cf1dd8SToby Isaac } 175420cf1dd8SToby Isaac PetscFunctionReturn(0); 175520cf1dd8SToby Isaac } 175620cf1dd8SToby Isaac 175720cf1dd8SToby Isaac /*@ 175820cf1dd8SToby Isaac PetscFERefine - Create a "refined" PetscFE object that refines the reference cell into smaller copies. This is typically used 175920cf1dd8SToby Isaac to precondition a higher order method with a lower order method on a refined mesh having the same number of dofs (but more 176020cf1dd8SToby Isaac sparsity). It is also used to create an interpolation between regularly refined meshes. 176120cf1dd8SToby Isaac 1762d083f849SBarry Smith Collective on fem 176320cf1dd8SToby Isaac 176420cf1dd8SToby Isaac Input Parameter: 176520cf1dd8SToby Isaac . fe - The initial PetscFE 176620cf1dd8SToby Isaac 176720cf1dd8SToby Isaac Output Parameter: 176820cf1dd8SToby Isaac . feRef - The refined PetscFE 176920cf1dd8SToby Isaac 17702b99622eSMatthew G. Knepley Level: advanced 177120cf1dd8SToby Isaac 177220cf1dd8SToby Isaac .seealso: PetscFEType, PetscFECreate(), PetscFESetType() 177320cf1dd8SToby Isaac @*/ 177420cf1dd8SToby Isaac PetscErrorCode PetscFERefine(PetscFE fe, PetscFE *feRef) 177520cf1dd8SToby Isaac { 177620cf1dd8SToby Isaac PetscSpace P, Pref; 177720cf1dd8SToby Isaac PetscDualSpace Q, Qref; 177820cf1dd8SToby Isaac DM K, Kref; 177920cf1dd8SToby Isaac PetscQuadrature q, qref; 178020cf1dd8SToby Isaac const PetscReal *v0, *jac; 178120cf1dd8SToby Isaac PetscInt numComp, numSubelements; 17821ac17e89SToby Isaac PetscInt cStart, cEnd, c; 17831ac17e89SToby Isaac PetscDualSpace *cellSpaces; 178420cf1dd8SToby Isaac PetscErrorCode ierr; 178520cf1dd8SToby Isaac 178620cf1dd8SToby Isaac PetscFunctionBegin; 178720cf1dd8SToby Isaac ierr = PetscFEGetBasisSpace(fe, &P);CHKERRQ(ierr); 178820cf1dd8SToby Isaac ierr = PetscFEGetDualSpace(fe, &Q);CHKERRQ(ierr); 178920cf1dd8SToby Isaac ierr = PetscFEGetQuadrature(fe, &q);CHKERRQ(ierr); 179020cf1dd8SToby Isaac ierr = PetscDualSpaceGetDM(Q, &K);CHKERRQ(ierr); 179120cf1dd8SToby Isaac /* Create space */ 179220cf1dd8SToby Isaac ierr = PetscObjectReference((PetscObject) P);CHKERRQ(ierr); 179320cf1dd8SToby Isaac Pref = P; 179420cf1dd8SToby Isaac /* Create dual space */ 179520cf1dd8SToby Isaac ierr = PetscDualSpaceDuplicate(Q, &Qref);CHKERRQ(ierr); 17961ac17e89SToby Isaac ierr = PetscDualSpaceSetType(Qref, PETSCDUALSPACEREFINED);CHKERRQ(ierr); 179720cf1dd8SToby Isaac ierr = DMRefine(K, PetscObjectComm((PetscObject) fe), &Kref);CHKERRQ(ierr); 179820cf1dd8SToby Isaac ierr = PetscDualSpaceSetDM(Qref, Kref);CHKERRQ(ierr); 17991ac17e89SToby Isaac ierr = DMPlexGetHeightStratum(Kref, 0, &cStart, &cEnd);CHKERRQ(ierr); 18001ac17e89SToby Isaac ierr = PetscMalloc1(cEnd - cStart, &cellSpaces);CHKERRQ(ierr); 18011ac17e89SToby Isaac /* TODO: fix for non-uniform refinement */ 18021ac17e89SToby Isaac for (c = 0; c < cEnd - cStart; c++) cellSpaces[c] = Q; 18031ac17e89SToby Isaac ierr = PetscDualSpaceRefinedSetCellSpaces(Qref, cellSpaces);CHKERRQ(ierr); 18041ac17e89SToby Isaac ierr = PetscFree(cellSpaces);CHKERRQ(ierr); 180520cf1dd8SToby Isaac ierr = DMDestroy(&Kref);CHKERRQ(ierr); 180620cf1dd8SToby Isaac ierr = PetscDualSpaceSetUp(Qref);CHKERRQ(ierr); 180720cf1dd8SToby Isaac /* Create element */ 180820cf1dd8SToby Isaac ierr = PetscFECreate(PetscObjectComm((PetscObject) fe), feRef);CHKERRQ(ierr); 180920cf1dd8SToby Isaac ierr = PetscFESetType(*feRef, PETSCFECOMPOSITE);CHKERRQ(ierr); 181020cf1dd8SToby Isaac ierr = PetscFESetBasisSpace(*feRef, Pref);CHKERRQ(ierr); 181120cf1dd8SToby Isaac ierr = PetscFESetDualSpace(*feRef, Qref);CHKERRQ(ierr); 181220cf1dd8SToby Isaac ierr = PetscFEGetNumComponents(fe, &numComp);CHKERRQ(ierr); 181320cf1dd8SToby Isaac ierr = PetscFESetNumComponents(*feRef, numComp);CHKERRQ(ierr); 181420cf1dd8SToby Isaac ierr = PetscFESetUp(*feRef);CHKERRQ(ierr); 181520cf1dd8SToby Isaac ierr = PetscSpaceDestroy(&Pref);CHKERRQ(ierr); 181620cf1dd8SToby Isaac ierr = PetscDualSpaceDestroy(&Qref);CHKERRQ(ierr); 181720cf1dd8SToby Isaac /* Create quadrature */ 181820cf1dd8SToby Isaac ierr = PetscFECompositeGetMapping(*feRef, &numSubelements, &v0, &jac, NULL);CHKERRQ(ierr); 181920cf1dd8SToby Isaac ierr = PetscQuadratureExpandComposite(q, numSubelements, v0, jac, &qref);CHKERRQ(ierr); 182020cf1dd8SToby Isaac ierr = PetscFESetQuadrature(*feRef, qref);CHKERRQ(ierr); 182120cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&qref);CHKERRQ(ierr); 182220cf1dd8SToby Isaac PetscFunctionReturn(0); 182320cf1dd8SToby Isaac } 182420cf1dd8SToby Isaac 182520cf1dd8SToby Isaac /*@C 182620cf1dd8SToby Isaac PetscFECreateDefault - Create a PetscFE for basic FEM computation 182720cf1dd8SToby Isaac 1828d083f849SBarry Smith Collective 182920cf1dd8SToby Isaac 183020cf1dd8SToby Isaac Input Parameters: 18317be5e748SToby Isaac + comm - The MPI comm 183220cf1dd8SToby Isaac . dim - The spatial dimension 183320cf1dd8SToby Isaac . Nc - The number of components 183420cf1dd8SToby Isaac . isSimplex - Flag for simplex reference cell, otherwise its a tensor product 183520cf1dd8SToby Isaac . prefix - The options prefix, or NULL 1836727cddd5SJacob Faibussowitsch - qorder - The quadrature order or PETSC_DETERMINE to use PetscSpace polynomial degree 183720cf1dd8SToby Isaac 183820cf1dd8SToby Isaac Output Parameter: 183920cf1dd8SToby Isaac . fem - The PetscFE object 184020cf1dd8SToby Isaac 1841e703855dSMatthew G. Knepley Note: 1842*8f2aacc6SMatthew G. Knepley Each subobject is SetFromOption() during creation, so that the object may be customized from the command line, using the prefix specified above. See the links below for the particular options available. 1843e703855dSMatthew G. Knepley 184420cf1dd8SToby Isaac Level: beginner 184520cf1dd8SToby Isaac 1846*8f2aacc6SMatthew G. Knepley .seealso: PetscSpaceSetFromOptions(), PetscDualSpaceSetFromOptions(), PetscFESetFromOptions(), PetscFECreate(), PetscSpaceCreate(), PetscDualSpaceCreate() 184720cf1dd8SToby Isaac @*/ 18487be5e748SToby Isaac PetscErrorCode PetscFECreateDefault(MPI_Comm comm, PetscInt dim, PetscInt Nc, PetscBool isSimplex, const char prefix[], PetscInt qorder, PetscFE *fem) 184920cf1dd8SToby Isaac { 185020cf1dd8SToby Isaac PetscQuadrature q, fq; 185120cf1dd8SToby Isaac DM K; 185220cf1dd8SToby Isaac PetscSpace P; 185320cf1dd8SToby Isaac PetscDualSpace Q; 185420cf1dd8SToby Isaac PetscInt order, quadPointsPerEdge; 185520cf1dd8SToby Isaac PetscBool tensor = isSimplex ? PETSC_FALSE : PETSC_TRUE; 185620cf1dd8SToby Isaac PetscErrorCode ierr; 185720cf1dd8SToby Isaac 185820cf1dd8SToby Isaac PetscFunctionBegin; 185920cf1dd8SToby Isaac /* Create space */ 18607be5e748SToby Isaac ierr = PetscSpaceCreate(comm, &P);CHKERRQ(ierr); 186120cf1dd8SToby Isaac ierr = PetscObjectSetOptionsPrefix((PetscObject) P, prefix);CHKERRQ(ierr); 186220cf1dd8SToby Isaac ierr = PetscSpacePolynomialSetTensor(P, tensor);CHKERRQ(ierr); 186320cf1dd8SToby Isaac ierr = PetscSpaceSetNumComponents(P, Nc);CHKERRQ(ierr); 186420cf1dd8SToby Isaac ierr = PetscSpaceSetNumVariables(P, dim);CHKERRQ(ierr); 1865028afddaSToby Isaac ierr = PetscSpaceSetFromOptions(P);CHKERRQ(ierr); 186620cf1dd8SToby Isaac ierr = PetscSpaceSetUp(P);CHKERRQ(ierr); 186720cf1dd8SToby Isaac ierr = PetscSpaceGetDegree(P, &order, NULL);CHKERRQ(ierr); 186820cf1dd8SToby Isaac ierr = PetscSpacePolynomialGetTensor(P, &tensor);CHKERRQ(ierr); 186920cf1dd8SToby Isaac /* Create dual space */ 18707be5e748SToby Isaac ierr = PetscDualSpaceCreate(comm, &Q);CHKERRQ(ierr); 187120cf1dd8SToby Isaac ierr = PetscDualSpaceSetType(Q,PETSCDUALSPACELAGRANGE);CHKERRQ(ierr); 187220cf1dd8SToby Isaac ierr = PetscObjectSetOptionsPrefix((PetscObject) Q, prefix);CHKERRQ(ierr); 187320cf1dd8SToby Isaac ierr = PetscDualSpaceCreateReferenceCell(Q, dim, isSimplex, &K);CHKERRQ(ierr); 187420cf1dd8SToby Isaac ierr = PetscDualSpaceSetDM(Q, K);CHKERRQ(ierr); 187520cf1dd8SToby Isaac ierr = DMDestroy(&K);CHKERRQ(ierr); 187620cf1dd8SToby Isaac ierr = PetscDualSpaceSetNumComponents(Q, Nc);CHKERRQ(ierr); 187720cf1dd8SToby Isaac ierr = PetscDualSpaceSetOrder(Q, order);CHKERRQ(ierr); 187820cf1dd8SToby Isaac ierr = PetscDualSpaceLagrangeSetTensor(Q, tensor);CHKERRQ(ierr); 187920cf1dd8SToby Isaac ierr = PetscDualSpaceSetFromOptions(Q);CHKERRQ(ierr); 188020cf1dd8SToby Isaac ierr = PetscDualSpaceSetUp(Q);CHKERRQ(ierr); 188120cf1dd8SToby Isaac /* Create element */ 18827be5e748SToby Isaac ierr = PetscFECreate(comm, fem);CHKERRQ(ierr); 188320cf1dd8SToby Isaac ierr = PetscObjectSetOptionsPrefix((PetscObject) *fem, prefix);CHKERRQ(ierr); 188420cf1dd8SToby Isaac ierr = PetscFESetBasisSpace(*fem, P);CHKERRQ(ierr); 188520cf1dd8SToby Isaac ierr = PetscFESetDualSpace(*fem, Q);CHKERRQ(ierr); 188620cf1dd8SToby Isaac ierr = PetscFESetNumComponents(*fem, Nc);CHKERRQ(ierr); 188791e89cf0SMatthew G. Knepley ierr = PetscFESetFromOptions(*fem);CHKERRQ(ierr); 188820cf1dd8SToby Isaac ierr = PetscFESetUp(*fem);CHKERRQ(ierr); 188920cf1dd8SToby Isaac ierr = PetscSpaceDestroy(&P);CHKERRQ(ierr); 189020cf1dd8SToby Isaac ierr = PetscDualSpaceDestroy(&Q);CHKERRQ(ierr); 189120cf1dd8SToby Isaac /* Create quadrature (with specified order if given) */ 189220cf1dd8SToby Isaac qorder = qorder >= 0 ? qorder : order; 189320cf1dd8SToby Isaac ierr = PetscObjectOptionsBegin((PetscObject)*fem);CHKERRQ(ierr); 18945a856986SBarry Smith ierr = PetscOptionsBoundedInt("-petscfe_default_quadrature_order","Quadrature order is one less than quadrature points per edge","PetscFECreateDefault",qorder,&qorder,NULL,0);CHKERRQ(ierr); 189520cf1dd8SToby Isaac ierr = PetscOptionsEnd();CHKERRQ(ierr); 189620cf1dd8SToby Isaac quadPointsPerEdge = PetscMax(qorder + 1,1); 189720cf1dd8SToby Isaac if (isSimplex) { 1898e6a796c3SToby Isaac ierr = PetscDTStroudConicalQuadrature(dim, 1, quadPointsPerEdge, -1.0, 1.0, &q);CHKERRQ(ierr); 1899e6a796c3SToby Isaac ierr = PetscDTStroudConicalQuadrature(dim-1, 1, quadPointsPerEdge, -1.0, 1.0, &fq);CHKERRQ(ierr); 19004ccfa306SStefano Zampini } else { 190120cf1dd8SToby Isaac ierr = PetscDTGaussTensorQuadrature(dim, 1, quadPointsPerEdge, -1.0, 1.0, &q);CHKERRQ(ierr); 190220cf1dd8SToby Isaac ierr = PetscDTGaussTensorQuadrature(dim-1, 1, quadPointsPerEdge, -1.0, 1.0, &fq);CHKERRQ(ierr); 190320cf1dd8SToby Isaac } 190420cf1dd8SToby Isaac ierr = PetscFESetQuadrature(*fem, q);CHKERRQ(ierr); 190520cf1dd8SToby Isaac ierr = PetscFESetFaceQuadrature(*fem, fq);CHKERRQ(ierr); 190620cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&q);CHKERRQ(ierr); 190720cf1dd8SToby Isaac ierr = PetscQuadratureDestroy(&fq);CHKERRQ(ierr); 190820cf1dd8SToby Isaac PetscFunctionReturn(0); 190920cf1dd8SToby Isaac } 19103f6b16c7SMatthew G. Knepley 1911e703855dSMatthew G. Knepley /*@ 1912e703855dSMatthew G. Knepley PetscFECreateLagrange - Create a PetscFE for the basic Lagrange space of degree k 1913e703855dSMatthew G. Knepley 1914e703855dSMatthew G. Knepley Collective 1915e703855dSMatthew G. Knepley 1916e703855dSMatthew G. Knepley Input Parameters: 1917e703855dSMatthew G. Knepley + comm - The MPI comm 1918e703855dSMatthew G. Knepley . dim - The spatial dimension 1919e703855dSMatthew G. Knepley . Nc - The number of components 1920e703855dSMatthew G. Knepley . isSimplex - Flag for simplex reference cell, otherwise its a tensor product 1921e703855dSMatthew G. Knepley . k - The degree k of the space 1922e703855dSMatthew G. Knepley - qorder - The quadrature order or PETSC_DETERMINE to use PetscSpace polynomial degree 1923e703855dSMatthew G. Knepley 1924e703855dSMatthew G. Knepley Output Parameter: 1925e703855dSMatthew G. Knepley . fem - The PetscFE object 1926e703855dSMatthew G. Knepley 1927e703855dSMatthew G. Knepley Level: beginner 1928e703855dSMatthew G. Knepley 1929e703855dSMatthew G. Knepley Notes: 1930e703855dSMatthew G. Knepley For simplices, this element is the space of maximum polynomial degree k, otherwise it is a tensor product of 1D polynomials, each with maximal degree k. 1931e703855dSMatthew G. Knepley 1932e703855dSMatthew G. Knepley .seealso: PetscFECreate(), PetscSpaceCreate(), PetscDualSpaceCreate() 1933e703855dSMatthew G. Knepley @*/ 1934e703855dSMatthew G. Knepley PetscErrorCode PetscFECreateLagrange(MPI_Comm comm, PetscInt dim, PetscInt Nc, PetscBool isSimplex, PetscInt k, PetscInt qorder, PetscFE *fem) 1935e703855dSMatthew G. Knepley { 1936e703855dSMatthew G. Knepley PetscQuadrature q, fq; 1937e703855dSMatthew G. Knepley DM K; 1938e703855dSMatthew G. Knepley PetscSpace P; 1939e703855dSMatthew G. Knepley PetscDualSpace Q; 1940e703855dSMatthew G. Knepley PetscInt quadPointsPerEdge; 1941e703855dSMatthew G. Knepley PetscBool tensor = isSimplex ? PETSC_FALSE : PETSC_TRUE; 1942e703855dSMatthew G. Knepley char name[64]; 1943e703855dSMatthew G. Knepley PetscErrorCode ierr; 1944e703855dSMatthew G. Knepley 1945e703855dSMatthew G. Knepley PetscFunctionBegin; 1946e703855dSMatthew G. Knepley /* Create space */ 1947e703855dSMatthew G. Knepley ierr = PetscSpaceCreate(comm, &P);CHKERRQ(ierr); 1948e703855dSMatthew G. Knepley ierr = PetscSpaceSetType(P, PETSCSPACEPOLYNOMIAL);CHKERRQ(ierr); 1949e703855dSMatthew G. Knepley ierr = PetscSpacePolynomialSetTensor(P, tensor);CHKERRQ(ierr); 1950e703855dSMatthew G. Knepley ierr = PetscSpaceSetNumComponents(P, Nc);CHKERRQ(ierr); 1951e703855dSMatthew G. Knepley ierr = PetscSpaceSetNumVariables(P, dim);CHKERRQ(ierr); 1952e703855dSMatthew G. Knepley ierr = PetscSpaceSetDegree(P, k, PETSC_DETERMINE);CHKERRQ(ierr); 1953e703855dSMatthew G. Knepley ierr = PetscSpaceSetUp(P);CHKERRQ(ierr); 1954e703855dSMatthew G. Knepley /* Create dual space */ 1955e703855dSMatthew G. Knepley ierr = PetscDualSpaceCreate(comm, &Q);CHKERRQ(ierr); 1956e703855dSMatthew G. Knepley ierr = PetscDualSpaceSetType(Q, PETSCDUALSPACELAGRANGE);CHKERRQ(ierr); 1957e703855dSMatthew G. Knepley ierr = PetscDualSpaceCreateReferenceCell(Q, dim, isSimplex, &K);CHKERRQ(ierr); 1958e703855dSMatthew G. Knepley ierr = PetscDualSpaceSetDM(Q, K);CHKERRQ(ierr); 1959e703855dSMatthew G. Knepley ierr = DMDestroy(&K);CHKERRQ(ierr); 1960e703855dSMatthew G. Knepley ierr = PetscDualSpaceSetNumComponents(Q, Nc);CHKERRQ(ierr); 1961e703855dSMatthew G. Knepley ierr = PetscDualSpaceSetOrder(Q, k);CHKERRQ(ierr); 1962e703855dSMatthew G. Knepley ierr = PetscDualSpaceLagrangeSetTensor(Q, tensor);CHKERRQ(ierr); 1963e703855dSMatthew G. Knepley ierr = PetscDualSpaceSetUp(Q);CHKERRQ(ierr); 1964849618d6SLisandro Dalcin /* Create finite element */ 1965e703855dSMatthew G. Knepley ierr = PetscFECreate(comm, fem);CHKERRQ(ierr); 196635e85c11SLisandro Dalcin ierr = PetscSNPrintf(name, sizeof(name), "%s%D", isSimplex? "P" : "Q", k);CHKERRQ(ierr); 196735e85c11SLisandro Dalcin ierr = PetscObjectSetName((PetscObject) *fem, name);CHKERRQ(ierr); 1968e703855dSMatthew G. Knepley ierr = PetscFESetType(*fem, PETSCFEBASIC);CHKERRQ(ierr); 1969e703855dSMatthew G. Knepley ierr = PetscFESetBasisSpace(*fem, P);CHKERRQ(ierr); 1970e703855dSMatthew G. Knepley ierr = PetscFESetDualSpace(*fem, Q);CHKERRQ(ierr); 1971e703855dSMatthew G. Knepley ierr = PetscFESetNumComponents(*fem, Nc);CHKERRQ(ierr); 1972e703855dSMatthew G. Knepley ierr = PetscFESetUp(*fem);CHKERRQ(ierr); 1973e703855dSMatthew G. Knepley ierr = PetscSpaceDestroy(&P);CHKERRQ(ierr); 1974e703855dSMatthew G. Knepley ierr = PetscDualSpaceDestroy(&Q);CHKERRQ(ierr); 1975e703855dSMatthew G. Knepley /* Create quadrature (with specified order if given) */ 1976e703855dSMatthew G. Knepley qorder = qorder >= 0 ? qorder : k; 1977e703855dSMatthew G. Knepley quadPointsPerEdge = PetscMax(qorder + 1,1); 1978e703855dSMatthew G. Knepley if (isSimplex) { 1979e6a796c3SToby Isaac ierr = PetscDTStroudConicalQuadrature(dim, 1, quadPointsPerEdge, -1.0, 1.0, &q);CHKERRQ(ierr); 1980e6a796c3SToby Isaac ierr = PetscDTStroudConicalQuadrature(dim-1, 1, quadPointsPerEdge, -1.0, 1.0, &fq);CHKERRQ(ierr); 1981e703855dSMatthew G. Knepley } else { 1982e703855dSMatthew G. Knepley ierr = PetscDTGaussTensorQuadrature(dim, 1, quadPointsPerEdge, -1.0, 1.0, &q);CHKERRQ(ierr); 1983e703855dSMatthew G. Knepley ierr = PetscDTGaussTensorQuadrature(dim-1, 1, quadPointsPerEdge, -1.0, 1.0, &fq);CHKERRQ(ierr); 1984e703855dSMatthew G. Knepley } 1985e703855dSMatthew G. Knepley ierr = PetscFESetQuadrature(*fem, q);CHKERRQ(ierr); 1986e703855dSMatthew G. Knepley ierr = PetscFESetFaceQuadrature(*fem, fq);CHKERRQ(ierr); 1987e703855dSMatthew G. Knepley ierr = PetscQuadratureDestroy(&q);CHKERRQ(ierr); 1988e703855dSMatthew G. Knepley ierr = PetscQuadratureDestroy(&fq);CHKERRQ(ierr); 1989849618d6SLisandro Dalcin /* Set finite element name */ 1990849618d6SLisandro Dalcin ierr = PetscSNPrintf(name, sizeof(name), "%s%D", isSimplex? "P" : "Q", k);CHKERRQ(ierr); 1991849618d6SLisandro Dalcin ierr = PetscFESetName(*fem, name);CHKERRQ(ierr); 1992e703855dSMatthew G. Knepley PetscFunctionReturn(0); 1993e703855dSMatthew G. Knepley } 1994e703855dSMatthew G. Knepley 19953f6b16c7SMatthew G. Knepley /*@C 19963f6b16c7SMatthew G. Knepley PetscFESetName - Names the FE and its subobjects 19973f6b16c7SMatthew G. Knepley 19983f6b16c7SMatthew G. Knepley Not collective 19993f6b16c7SMatthew G. Knepley 20003f6b16c7SMatthew G. Knepley Input Parameters: 20013f6b16c7SMatthew G. Knepley + fe - The PetscFE 20023f6b16c7SMatthew G. Knepley - name - The name 20033f6b16c7SMatthew G. Knepley 20042b99622eSMatthew G. Knepley Level: intermediate 20053f6b16c7SMatthew G. Knepley 20063f6b16c7SMatthew G. Knepley .seealso: PetscFECreate(), PetscSpaceCreate(), PetscDualSpaceCreate() 20073f6b16c7SMatthew G. Knepley @*/ 20083f6b16c7SMatthew G. Knepley PetscErrorCode PetscFESetName(PetscFE fe, const char name[]) 20093f6b16c7SMatthew G. Knepley { 20103f6b16c7SMatthew G. Knepley PetscSpace P; 20113f6b16c7SMatthew G. Knepley PetscDualSpace Q; 20123f6b16c7SMatthew G. Knepley PetscErrorCode ierr; 20133f6b16c7SMatthew G. Knepley 20143f6b16c7SMatthew G. Knepley PetscFunctionBegin; 20153f6b16c7SMatthew G. Knepley ierr = PetscFEGetBasisSpace(fe, &P);CHKERRQ(ierr); 20163f6b16c7SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &Q);CHKERRQ(ierr); 20173f6b16c7SMatthew G. Knepley ierr = PetscObjectSetName((PetscObject) fe, name);CHKERRQ(ierr); 20183f6b16c7SMatthew G. Knepley ierr = PetscObjectSetName((PetscObject) P, name);CHKERRQ(ierr); 20193f6b16c7SMatthew G. Knepley ierr = PetscObjectSetName((PetscObject) Q, name);CHKERRQ(ierr); 20203f6b16c7SMatthew G. Knepley PetscFunctionReturn(0); 20213f6b16c7SMatthew G. Knepley } 2022a8f1f9e5SMatthew G. Knepley 2023ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFEEvaluateFieldJets_Internal(PetscDS ds, PetscInt Nf, PetscInt r, PetscInt q, PetscTabulation T[], PetscFEGeom *fegeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscScalar u[], PetscScalar u_x[], PetscScalar u_t[]) 2024a8f1f9e5SMatthew G. Knepley { 2025f9244615SMatthew G. Knepley PetscInt dOffset = 0, fOffset = 0, f, g; 2026a8f1f9e5SMatthew G. Knepley PetscErrorCode ierr; 2027a8f1f9e5SMatthew G. Knepley 2028a8f1f9e5SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 2029a8f1f9e5SMatthew G. Knepley PetscFE fe; 2030f9244615SMatthew G. Knepley const PetscInt k = ds->jetDegree[f]; 2031ef0bb6c7SMatthew G. Knepley const PetscInt cdim = T[f]->cdim; 2032ef0bb6c7SMatthew G. Knepley const PetscInt Nq = T[f]->Np; 2033ef0bb6c7SMatthew G. Knepley const PetscInt Nbf = T[f]->Nb; 2034ef0bb6c7SMatthew G. Knepley const PetscInt Ncf = T[f]->Nc; 2035ef0bb6c7SMatthew G. Knepley const PetscReal *Bq = &T[f]->T[0][(r*Nq+q)*Nbf*Ncf]; 2036ef0bb6c7SMatthew G. Knepley const PetscReal *Dq = &T[f]->T[1][(r*Nq+q)*Nbf*Ncf*cdim]; 2037f9244615SMatthew G. Knepley const PetscReal *Hq = k > 1 ? &T[f]->T[2][(r*Nq+q)*Nbf*Ncf*cdim*cdim] : NULL; 2038f9244615SMatthew G. Knepley PetscInt hOffset = 0, b, c, d; 2039a8f1f9e5SMatthew G. Knepley 2040a8f1f9e5SMatthew G. Knepley ierr = PetscDSGetDiscretization(ds, f, (PetscObject *) &fe);CHKERRQ(ierr); 2041a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u[fOffset+c] = 0.0; 2042ef0bb6c7SMatthew G. Knepley for (d = 0; d < cdim*Ncf; ++d) u_x[fOffset*cdim+d] = 0.0; 2043a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2044a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2045a8f1f9e5SMatthew G. Knepley const PetscInt cidx = b*Ncf+c; 2046a8f1f9e5SMatthew G. Knepley 2047a8f1f9e5SMatthew G. Knepley u[fOffset+c] += Bq[cidx]*coefficients[dOffset+b]; 2048ef0bb6c7SMatthew G. Knepley for (d = 0; d < cdim; ++d) u_x[(fOffset+c)*cdim+d] += Dq[cidx*cdim+d]*coefficients[dOffset+b]; 2049a8f1f9e5SMatthew G. Knepley } 2050a8f1f9e5SMatthew G. Knepley } 2051f9244615SMatthew G. Knepley if (k > 1) { 2052f9244615SMatthew G. Knepley for (g = 0; g < Nf; ++g) hOffset += T[g]->Nc*cdim; 2053f9244615SMatthew G. Knepley for (d = 0; d < cdim*cdim*Ncf; ++d) u_x[hOffset+fOffset*cdim*cdim+d] = 0.0; 2054f9244615SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2055f9244615SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2056f9244615SMatthew G. Knepley const PetscInt cidx = b*Ncf+c; 2057f9244615SMatthew G. Knepley 2058f9244615SMatthew G. Knepley for (d = 0; d < cdim*cdim; ++d) u_x[hOffset+(fOffset+c)*cdim*cdim+d] += Hq[cidx*cdim*cdim+d]*coefficients[dOffset+b]; 2059f9244615SMatthew G. Knepley } 2060f9244615SMatthew G. Knepley } 2061f9244615SMatthew G. Knepley ierr = PetscFEPushforwardHessian(fe, fegeom, 1, &u_x[hOffset+fOffset*cdim*cdim]);CHKERRQ(ierr); 2062f9244615SMatthew G. Knepley } 20632edcad52SToby Isaac ierr = PetscFEPushforward(fe, fegeom, 1, &u[fOffset]);CHKERRQ(ierr); 20642edcad52SToby Isaac ierr = PetscFEPushforwardGradient(fe, fegeom, 1, &u_x[fOffset*cdim]);CHKERRQ(ierr); 2065a8f1f9e5SMatthew G. Knepley if (u_t) { 2066a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u_t[fOffset+c] = 0.0; 2067a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 2068a8f1f9e5SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 2069a8f1f9e5SMatthew G. Knepley const PetscInt cidx = b*Ncf+c; 2070a8f1f9e5SMatthew G. Knepley 2071a8f1f9e5SMatthew G. Knepley u_t[fOffset+c] += Bq[cidx]*coefficients_t[dOffset+b]; 2072a8f1f9e5SMatthew G. Knepley } 2073a8f1f9e5SMatthew G. Knepley } 20742edcad52SToby Isaac ierr = PetscFEPushforward(fe, fegeom, 1, &u_t[fOffset]);CHKERRQ(ierr); 2075a8f1f9e5SMatthew G. Knepley } 2076a8f1f9e5SMatthew G. Knepley fOffset += Ncf; 2077a8f1f9e5SMatthew G. Knepley dOffset += Nbf; 2078a8f1f9e5SMatthew G. Knepley } 2079a8f1f9e5SMatthew G. Knepley return 0; 2080a8f1f9e5SMatthew G. Knepley } 2081a8f1f9e5SMatthew G. Knepley 2082665f567fSMatthew G. Knepley PetscErrorCode PetscFEEvaluateFieldJets_Hybrid_Internal(PetscDS ds, PetscInt Nf, PetscInt r, PetscInt q, PetscTabulation T[], PetscFEGeom *fegeom, const PetscScalar coefficients[], const PetscScalar coefficients_t[], PetscScalar u[], PetscScalar u_x[], PetscScalar u_t[]) 208327f02ce8SMatthew G. Knepley { 208427f02ce8SMatthew G. Knepley PetscInt dOffset = 0, fOffset = 0, g; 208527f02ce8SMatthew G. Knepley PetscErrorCode ierr; 208627f02ce8SMatthew G. Knepley 208727f02ce8SMatthew G. Knepley for (g = 0; g < 2*Nf-1; ++g) { 2088665f567fSMatthew G. Knepley if (!T[g/2]) continue; 2089665f567fSMatthew G. Knepley { 209027f02ce8SMatthew G. Knepley PetscFE fe; 209127f02ce8SMatthew G. Knepley const PetscInt f = g/2; 2092665f567fSMatthew G. Knepley const PetscInt cdim = T[f]->cdim; 2093665f567fSMatthew G. Knepley const PetscInt Nq = T[f]->Np; 2094665f567fSMatthew G. Knepley const PetscInt Nbf = T[f]->Nb; 2095665f567fSMatthew G. Knepley const PetscInt Ncf = T[f]->Nc; 2096665f567fSMatthew G. Knepley const PetscReal *Bq = &T[f]->T[0][(r*Nq+q)*Nbf*Ncf]; 2097665f567fSMatthew G. Knepley const PetscReal *Dq = &T[f]->T[1][(r*Nq+q)*Nbf*Ncf*cdim]; 209827f02ce8SMatthew G. Knepley PetscInt b, c, d; 209927f02ce8SMatthew G. Knepley 210027f02ce8SMatthew G. Knepley fe = (PetscFE) ds->disc[f]; 210127f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u[fOffset+c] = 0.0; 2102665f567fSMatthew G. Knepley for (d = 0; d < cdim*Ncf; ++d) u_x[fOffset*cdim+d] = 0.0; 210327f02ce8SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 210427f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 210527f02ce8SMatthew G. Knepley const PetscInt cidx = b*Ncf+c; 210627f02ce8SMatthew G. Knepley 210727f02ce8SMatthew G. Knepley u[fOffset+c] += Bq[cidx]*coefficients[dOffset+b]; 2108665f567fSMatthew G. Knepley for (d = 0; d < cdim; ++d) u_x[(fOffset+c)*cdim+d] += Dq[cidx*cdim+d]*coefficients[dOffset+b]; 210927f02ce8SMatthew G. Knepley } 211027f02ce8SMatthew G. Knepley } 211127f02ce8SMatthew G. Knepley ierr = PetscFEPushforward(fe, fegeom, 1, &u[fOffset]);CHKERRQ(ierr); 2112665f567fSMatthew G. Knepley ierr = PetscFEPushforwardGradient(fe, fegeom, 1, &u_x[fOffset*cdim]);CHKERRQ(ierr); 211327f02ce8SMatthew G. Knepley if (u_t) { 211427f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) u_t[fOffset+c] = 0.0; 211527f02ce8SMatthew G. Knepley for (b = 0; b < Nbf; ++b) { 211627f02ce8SMatthew G. Knepley for (c = 0; c < Ncf; ++c) { 211727f02ce8SMatthew G. Knepley const PetscInt cidx = b*Ncf+c; 211827f02ce8SMatthew G. Knepley 211927f02ce8SMatthew G. Knepley u_t[fOffset+c] += Bq[cidx]*coefficients_t[dOffset+b]; 212027f02ce8SMatthew G. Knepley } 212127f02ce8SMatthew G. Knepley } 212227f02ce8SMatthew G. Knepley ierr = PetscFEPushforward(fe, fegeom, 1, &u_t[fOffset]);CHKERRQ(ierr); 212327f02ce8SMatthew G. Knepley } 212427f02ce8SMatthew G. Knepley fOffset += Ncf; 212527f02ce8SMatthew G. Knepley dOffset += Nbf; 212627f02ce8SMatthew G. Knepley } 2127665f567fSMatthew G. Knepley } 212827f02ce8SMatthew G. Knepley return 0; 212927f02ce8SMatthew G. Knepley } 213027f02ce8SMatthew G. Knepley 2131a8f1f9e5SMatthew G. Knepley PetscErrorCode PetscFEEvaluateFaceFields_Internal(PetscDS prob, PetscInt field, PetscInt faceLoc, const PetscScalar coefficients[], PetscScalar u[]) 2132a8f1f9e5SMatthew G. Knepley { 2133a8f1f9e5SMatthew G. Knepley PetscFE fe; 2134ef0bb6c7SMatthew G. Knepley PetscTabulation Tc; 2135ef0bb6c7SMatthew G. Knepley PetscInt b, c; 2136a8f1f9e5SMatthew G. Knepley PetscErrorCode ierr; 2137a8f1f9e5SMatthew G. Knepley 2138a8f1f9e5SMatthew G. Knepley if (!prob) return 0; 2139a8f1f9e5SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr); 2140ef0bb6c7SMatthew G. Knepley ierr = PetscFEGetFaceCentroidTabulation(fe, &Tc);CHKERRQ(ierr); 2141ef0bb6c7SMatthew G. Knepley { 2142ef0bb6c7SMatthew G. Knepley const PetscReal *faceBasis = Tc->T[0]; 2143ef0bb6c7SMatthew G. Knepley const PetscInt Nb = Tc->Nb; 2144ef0bb6c7SMatthew G. Knepley const PetscInt Nc = Tc->Nc; 2145ef0bb6c7SMatthew G. Knepley 2146a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) {u[c] = 0.0;} 2147a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2148a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 2149813a933aSJed Brown u[c] += coefficients[b] * faceBasis[(faceLoc*Nb + b)*Nc + c]; 2150a8f1f9e5SMatthew G. Knepley } 2151a8f1f9e5SMatthew G. Knepley } 2152ef0bb6c7SMatthew G. Knepley } 2153a8f1f9e5SMatthew G. Knepley return 0; 2154a8f1f9e5SMatthew G. Knepley } 2155a8f1f9e5SMatthew G. Knepley 2156ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFEUpdateElementVec_Internal(PetscFE fe, PetscTabulation T, PetscInt r, PetscScalar tmpBasis[], PetscScalar tmpBasisDer[], PetscFEGeom *fegeom, PetscScalar f0[], PetscScalar f1[], PetscScalar elemVec[]) 2157a8f1f9e5SMatthew G. Knepley { 215827f02ce8SMatthew G. Knepley const PetscInt dE = T->cdim; /* fegeom->dimEmbed */ 2159ef0bb6c7SMatthew G. Knepley const PetscInt Nq = T->Np; 2160ef0bb6c7SMatthew G. Knepley const PetscInt Nb = T->Nb; 2161ef0bb6c7SMatthew G. Knepley const PetscInt Nc = T->Nc; 2162ef0bb6c7SMatthew G. Knepley const PetscReal *basis = &T->T[0][r*Nq*Nb*Nc]; 2163665f567fSMatthew G. Knepley const PetscReal *basisDer = &T->T[1][r*Nq*Nb*Nc*dE]; 2164a8f1f9e5SMatthew G. Knepley PetscInt q, b, c, d; 2165a8f1f9e5SMatthew G. Knepley PetscErrorCode ierr; 2166a8f1f9e5SMatthew G. Knepley 2167a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) elemVec[b] = 0.0; 2168a8f1f9e5SMatthew G. Knepley for (q = 0; q < Nq; ++q) { 2169a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2170a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 2171a8f1f9e5SMatthew G. Knepley const PetscInt bcidx = b*Nc+c; 2172a8f1f9e5SMatthew G. Knepley 2173a8f1f9e5SMatthew G. Knepley tmpBasis[bcidx] = basis[q*Nb*Nc+bcidx]; 217427f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) tmpBasisDer[bcidx*dE+d] = basisDer[q*Nb*Nc*dE+bcidx*dE+d]; 2175a8f1f9e5SMatthew G. Knepley } 2176a8f1f9e5SMatthew G. Knepley } 21772edcad52SToby Isaac ierr = PetscFEPushforward(fe, fegeom, Nb, tmpBasis);CHKERRQ(ierr); 21782edcad52SToby Isaac ierr = PetscFEPushforwardGradient(fe, fegeom, Nb, tmpBasisDer);CHKERRQ(ierr); 2179a8f1f9e5SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 2180a8f1f9e5SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 2181a8f1f9e5SMatthew G. Knepley const PetscInt bcidx = b*Nc+c; 2182a8f1f9e5SMatthew G. Knepley const PetscInt qcidx = q*Nc+c; 2183a8f1f9e5SMatthew G. Knepley 2184a8f1f9e5SMatthew G. Knepley elemVec[b] += tmpBasis[bcidx]*f0[qcidx]; 218527f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) elemVec[b] += tmpBasisDer[bcidx*dE+d]*f1[qcidx*dE+d]; 218627f02ce8SMatthew G. Knepley } 218727f02ce8SMatthew G. Knepley } 218827f02ce8SMatthew G. Knepley } 218927f02ce8SMatthew G. Knepley return(0); 219027f02ce8SMatthew G. Knepley } 219127f02ce8SMatthew G. Knepley 219227f02ce8SMatthew G. Knepley PetscErrorCode PetscFEUpdateElementVec_Hybrid_Internal(PetscFE fe, PetscTabulation T, PetscInt r, PetscScalar tmpBasis[], PetscScalar tmpBasisDer[], PetscFEGeom *fegeom, PetscScalar f0[], PetscScalar f1[], PetscScalar elemVec[]) 219327f02ce8SMatthew G. Knepley { 219427f02ce8SMatthew G. Knepley const PetscInt dE = T->cdim; 219527f02ce8SMatthew G. Knepley const PetscInt Nq = T->Np; 219627f02ce8SMatthew G. Knepley const PetscInt Nb = T->Nb; 219727f02ce8SMatthew G. Knepley const PetscInt Nc = T->Nc; 219827f02ce8SMatthew G. Knepley const PetscReal *basis = &T->T[0][r*Nq*Nb*Nc]; 219927f02ce8SMatthew G. Knepley const PetscReal *basisDer = &T->T[1][r*Nq*Nb*Nc*dE]; 220027f02ce8SMatthew G. Knepley PetscInt q, b, c, d, s; 220127f02ce8SMatthew G. Knepley PetscErrorCode ierr; 220227f02ce8SMatthew G. Knepley 220327f02ce8SMatthew G. Knepley for (b = 0; b < Nb*2; ++b) elemVec[b] = 0.0; 220427f02ce8SMatthew G. Knepley for (q = 0; q < Nq; ++q) { 220527f02ce8SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 220627f02ce8SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 220727f02ce8SMatthew G. Knepley const PetscInt bcidx = b*Nc+c; 220827f02ce8SMatthew G. Knepley 220927f02ce8SMatthew G. Knepley tmpBasis[bcidx] = basis[q*Nb*Nc+bcidx]; 221027f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) tmpBasisDer[bcidx*dE+d] = basisDer[q*Nb*Nc*dE+bcidx*dE+d]; 221127f02ce8SMatthew G. Knepley } 221227f02ce8SMatthew G. Knepley } 221327f02ce8SMatthew G. Knepley ierr = PetscFEPushforward(fe, fegeom, Nb, tmpBasis);CHKERRQ(ierr); 221427f02ce8SMatthew G. Knepley ierr = PetscFEPushforwardGradient(fe, fegeom, Nb, tmpBasisDer);CHKERRQ(ierr); 221527f02ce8SMatthew G. Knepley for (s = 0; s < 2; ++s) { 221627f02ce8SMatthew G. Knepley for (b = 0; b < Nb; ++b) { 221727f02ce8SMatthew G. Knepley for (c = 0; c < Nc; ++c) { 221827f02ce8SMatthew G. Knepley const PetscInt bcidx = b*Nc+c; 221927f02ce8SMatthew G. Knepley const PetscInt qcidx = (q*2+s)*Nc+c; 222027f02ce8SMatthew G. Knepley 222127f02ce8SMatthew G. Knepley elemVec[Nb*s+b] += tmpBasis[bcidx]*f0[qcidx]; 222227f02ce8SMatthew G. Knepley for (d = 0; d < dE; ++d) elemVec[Nb*s+b] += tmpBasisDer[bcidx*dE+d]*f1[qcidx*dE+d]; 222327f02ce8SMatthew G. Knepley } 2224a8f1f9e5SMatthew G. Knepley } 2225a8f1f9e5SMatthew G. Knepley } 2226a8f1f9e5SMatthew G. Knepley } 2227a8f1f9e5SMatthew G. Knepley return(0); 2228a8f1f9e5SMatthew G. Knepley } 2229a8f1f9e5SMatthew G. Knepley 2230ef0bb6c7SMatthew G. Knepley PetscErrorCode PetscFEUpdateElementMat_Internal(PetscFE feI, PetscFE feJ, PetscInt r, PetscInt q, PetscTabulation TI, PetscScalar tmpBasisI[], PetscScalar tmpBasisDerI[], PetscTabulation TJ, PetscScalar tmpBasisJ[], PetscScalar tmpBasisDerJ[], PetscFEGeom *fegeom, const PetscScalar g0[], const PetscScalar g1[], const PetscScalar g2[], const PetscScalar g3[], PetscInt eOffset, PetscInt totDim, PetscInt offsetI, PetscInt offsetJ, PetscScalar elemMat[]) 2231a8f1f9e5SMatthew G. Knepley { 223227f02ce8SMatthew G. Knepley const PetscInt dE = TI->cdim; 2233ef0bb6c7SMatthew G. Knepley const PetscInt NqI = TI->Np; 2234ef0bb6c7SMatthew G. Knepley const PetscInt NbI = TI->Nb; 2235ef0bb6c7SMatthew G. Knepley const PetscInt NcI = TI->Nc; 2236ef0bb6c7SMatthew G. Knepley const PetscReal *basisI = &TI->T[0][(r*NqI+q)*NbI*NcI]; 2237665f567fSMatthew G. Knepley const PetscReal *basisDerI = &TI->T[1][(r*NqI+q)*NbI*NcI*dE]; 2238ef0bb6c7SMatthew G. Knepley const PetscInt NqJ = TJ->Np; 2239ef0bb6c7SMatthew G. Knepley const PetscInt NbJ = TJ->Nb; 2240ef0bb6c7SMatthew G. Knepley const PetscInt NcJ = TJ->Nc; 2241ef0bb6c7SMatthew G. Knepley const PetscReal *basisJ = &TJ->T[0][(r*NqJ+q)*NbJ*NcJ]; 2242665f567fSMatthew G. Knepley const PetscReal *basisDerJ = &TJ->T[1][(r*NqJ+q)*NbJ*NcJ*dE]; 2243a8f1f9e5SMatthew G. Knepley PetscInt f, fc, g, gc, df, dg; 2244a8f1f9e5SMatthew G. Knepley PetscErrorCode ierr; 2245a8f1f9e5SMatthew G. Knepley 2246a8f1f9e5SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 2247a8f1f9e5SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 2248a8f1f9e5SMatthew G. Knepley const PetscInt fidx = f*NcI+fc; /* Test function basis index */ 2249a8f1f9e5SMatthew G. Knepley 2250a8f1f9e5SMatthew G. Knepley tmpBasisI[fidx] = basisI[fidx]; 225127f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) tmpBasisDerI[fidx*dE+df] = basisDerI[fidx*dE+df]; 2252a8f1f9e5SMatthew G. Knepley } 2253a8f1f9e5SMatthew G. Knepley } 22542edcad52SToby Isaac ierr = PetscFEPushforward(feI, fegeom, NbI, tmpBasisI);CHKERRQ(ierr); 22552edcad52SToby Isaac ierr = PetscFEPushforwardGradient(feI, fegeom, NbI, tmpBasisDerI);CHKERRQ(ierr); 2256a8f1f9e5SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 2257a8f1f9e5SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 2258a8f1f9e5SMatthew G. Knepley const PetscInt gidx = g*NcJ+gc; /* Trial function basis index */ 2259a8f1f9e5SMatthew G. Knepley 2260a8f1f9e5SMatthew G. Knepley tmpBasisJ[gidx] = basisJ[gidx]; 226127f02ce8SMatthew G. Knepley for (dg = 0; dg < dE; ++dg) tmpBasisDerJ[gidx*dE+dg] = basisDerJ[gidx*dE+dg]; 2262a8f1f9e5SMatthew G. Knepley } 2263a8f1f9e5SMatthew G. Knepley } 22642edcad52SToby Isaac ierr = PetscFEPushforward(feJ, fegeom, NbJ, tmpBasisJ);CHKERRQ(ierr); 22652edcad52SToby Isaac ierr = PetscFEPushforwardGradient(feJ, fegeom, NbJ, tmpBasisDerJ);CHKERRQ(ierr); 2266a8f1f9e5SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 2267a8f1f9e5SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 2268a8f1f9e5SMatthew G. Knepley const PetscInt fidx = f*NcI+fc; /* Test function basis index */ 2269a8f1f9e5SMatthew G. Knepley const PetscInt i = offsetI+f; /* Element matrix row */ 2270a8f1f9e5SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 2271a8f1f9e5SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 2272a8f1f9e5SMatthew G. Knepley const PetscInt gidx = g*NcJ+gc; /* Trial function basis index */ 2273a8f1f9e5SMatthew G. Knepley const PetscInt j = offsetJ+g; /* Element matrix column */ 2274a8f1f9e5SMatthew G. Knepley const PetscInt fOff = eOffset+i*totDim+j; 2275a8f1f9e5SMatthew G. Knepley 2276a8f1f9e5SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx]*g0[fc*NcJ+gc]*tmpBasisJ[gidx]; 227727f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) { 227827f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx]*g1[(fc*NcJ+gc)*dE+df]*tmpBasisDerJ[gidx*dE+df]; 227927f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx*dE+df]*g2[(fc*NcJ+gc)*dE+df]*tmpBasisJ[gidx]; 228027f02ce8SMatthew G. Knepley for (dg = 0; dg < dE; ++dg) { 228127f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx*dE+df]*g3[((fc*NcJ+gc)*dE+df)*dE+dg]*tmpBasisDerJ[gidx*dE+dg]; 228227f02ce8SMatthew G. Knepley } 228327f02ce8SMatthew G. Knepley } 228427f02ce8SMatthew G. Knepley } 228527f02ce8SMatthew G. Knepley } 228627f02ce8SMatthew G. Knepley } 228727f02ce8SMatthew G. Knepley } 228827f02ce8SMatthew G. Knepley return(0); 228927f02ce8SMatthew G. Knepley } 229027f02ce8SMatthew G. Knepley 2291665f567fSMatthew G. Knepley PetscErrorCode PetscFEUpdateElementMat_Hybrid_Internal(PetscFE feI, PetscBool isHybridI, PetscFE feJ, PetscBool isHybridJ, PetscInt r, PetscInt q, PetscTabulation TI, PetscScalar tmpBasisI[], PetscScalar tmpBasisDerI[], PetscTabulation TJ, PetscScalar tmpBasisJ[], PetscScalar tmpBasisDerJ[], PetscFEGeom *fegeom, const PetscScalar g0[], const PetscScalar g1[], const PetscScalar g2[], const PetscScalar g3[], PetscInt eOffset, PetscInt totDim, PetscInt offsetI, PetscInt offsetJ, PetscScalar elemMat[]) 229227f02ce8SMatthew G. Knepley { 2293665f567fSMatthew G. Knepley const PetscInt dE = TI->cdim; 2294665f567fSMatthew G. Knepley const PetscInt NqI = TI->Np; 2295665f567fSMatthew G. Knepley const PetscInt NbI = TI->Nb; 2296665f567fSMatthew G. Knepley const PetscInt NcI = TI->Nc; 2297665f567fSMatthew G. Knepley const PetscReal *basisI = &TI->T[0][(r*NqI+q)*NbI*NcI]; 2298665f567fSMatthew G. Knepley const PetscReal *basisDerI = &TI->T[1][(r*NqI+q)*NbI*NcI*dE]; 2299665f567fSMatthew G. Knepley const PetscInt NqJ = TJ->Np; 2300665f567fSMatthew G. Knepley const PetscInt NbJ = TJ->Nb; 2301665f567fSMatthew G. Knepley const PetscInt NcJ = TJ->Nc; 2302665f567fSMatthew G. Knepley const PetscReal *basisJ = &TJ->T[0][(r*NqJ+q)*NbJ*NcJ]; 2303665f567fSMatthew G. Knepley const PetscReal *basisDerJ = &TJ->T[1][(r*NqJ+q)*NbJ*NcJ*dE]; 230427f02ce8SMatthew G. Knepley const PetscInt Ns = isHybridI ? 1 : 2; 230527f02ce8SMatthew G. Knepley const PetscInt Nt = isHybridJ ? 1 : 2; 230627f02ce8SMatthew G. Knepley PetscInt f, fc, g, gc, df, dg, s, t; 230727f02ce8SMatthew G. Knepley PetscErrorCode ierr; 230827f02ce8SMatthew G. Knepley 230927f02ce8SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 231027f02ce8SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 231127f02ce8SMatthew G. Knepley const PetscInt fidx = f*NcI+fc; /* Test function basis index */ 231227f02ce8SMatthew G. Knepley 231327f02ce8SMatthew G. Knepley tmpBasisI[fidx] = basisI[fidx]; 2314665f567fSMatthew G. Knepley for (df = 0; df < dE; ++df) tmpBasisDerI[fidx*dE+df] = basisDerI[fidx*dE+df]; 231527f02ce8SMatthew G. Knepley } 231627f02ce8SMatthew G. Knepley } 231727f02ce8SMatthew G. Knepley ierr = PetscFEPushforward(feI, fegeom, NbI, tmpBasisI);CHKERRQ(ierr); 231827f02ce8SMatthew G. Knepley ierr = PetscFEPushforwardGradient(feI, fegeom, NbI, tmpBasisDerI);CHKERRQ(ierr); 231927f02ce8SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 232027f02ce8SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 232127f02ce8SMatthew G. Knepley const PetscInt gidx = g*NcJ+gc; /* Trial function basis index */ 232227f02ce8SMatthew G. Knepley 232327f02ce8SMatthew G. Knepley tmpBasisJ[gidx] = basisJ[gidx]; 2324665f567fSMatthew G. Knepley for (dg = 0; dg < dE; ++dg) tmpBasisDerJ[gidx*dE+dg] = basisDerJ[gidx*dE+dg]; 232527f02ce8SMatthew G. Knepley } 232627f02ce8SMatthew G. Knepley } 232727f02ce8SMatthew G. Knepley ierr = PetscFEPushforward(feJ, fegeom, NbJ, tmpBasisJ);CHKERRQ(ierr); 232827f02ce8SMatthew G. Knepley ierr = PetscFEPushforwardGradient(feJ, fegeom, NbJ, tmpBasisDerJ);CHKERRQ(ierr); 232927f02ce8SMatthew G. Knepley for (s = 0; s < Ns; ++s) { 233027f02ce8SMatthew G. Knepley for (f = 0; f < NbI; ++f) { 233127f02ce8SMatthew G. Knepley for (fc = 0; fc < NcI; ++fc) { 233227f02ce8SMatthew G. Knepley const PetscInt sc = NcI*s+fc; /* components from each side of the surface */ 233327f02ce8SMatthew G. Knepley const PetscInt fidx = f*NcI+fc; /* Test function basis index */ 233427f02ce8SMatthew G. Knepley const PetscInt i = offsetI+NbI*s+f; /* Element matrix row */ 233527f02ce8SMatthew G. Knepley for (t = 0; t < Nt; ++t) { 233627f02ce8SMatthew G. Knepley for (g = 0; g < NbJ; ++g) { 233727f02ce8SMatthew G. Knepley for (gc = 0; gc < NcJ; ++gc) { 233827f02ce8SMatthew G. Knepley const PetscInt tc = NcJ*t+gc; /* components from each side of the surface */ 233927f02ce8SMatthew G. Knepley const PetscInt gidx = g*NcJ+gc; /* Trial function basis index */ 234027f02ce8SMatthew G. Knepley const PetscInt j = offsetJ+NbJ*t+g; /* Element matrix column */ 234127f02ce8SMatthew G. Knepley const PetscInt fOff = eOffset+i*totDim+j; 234227f02ce8SMatthew G. Knepley 234327f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx]*g0[sc*NcJ*Nt+tc]*tmpBasisJ[gidx]; 234427f02ce8SMatthew G. Knepley for (df = 0; df < dE; ++df) { 234527f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisI[fidx]*g1[(sc*NcJ*Nt+tc)*dE+df]*tmpBasisDerJ[gidx*dE+df]; 234627f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx*dE+df]*g2[(sc*NcJ*Nt+tc)*dE+df]*tmpBasisJ[gidx]; 234727f02ce8SMatthew G. Knepley for (dg = 0; dg < dE; ++dg) { 234827f02ce8SMatthew G. Knepley elemMat[fOff] += tmpBasisDerI[fidx*dE+df]*g3[((sc*NcJ*Nt+tc)*dE+df)*dE+dg]*tmpBasisDerJ[gidx*dE+dg]; 234927f02ce8SMatthew G. Knepley } 235027f02ce8SMatthew G. Knepley } 2351a8f1f9e5SMatthew G. Knepley } 2352a8f1f9e5SMatthew G. Knepley } 2353a8f1f9e5SMatthew G. Knepley } 2354a8f1f9e5SMatthew G. Knepley } 2355a8f1f9e5SMatthew G. Knepley } 2356a8f1f9e5SMatthew G. Knepley } 2357a8f1f9e5SMatthew G. Knepley return(0); 2358a8f1f9e5SMatthew G. Knepley } 2359c9ba7969SMatthew G. Knepley 2360c9ba7969SMatthew G. Knepley PetscErrorCode PetscFECreateCellGeometry(PetscFE fe, PetscQuadrature quad, PetscFEGeom *cgeom) 2361c9ba7969SMatthew G. Knepley { 2362c9ba7969SMatthew G. Knepley PetscDualSpace dsp; 2363c9ba7969SMatthew G. Knepley DM dm; 2364c9ba7969SMatthew G. Knepley PetscQuadrature quadDef; 2365c9ba7969SMatthew G. Knepley PetscInt dim, cdim, Nq; 2366c9ba7969SMatthew G. Knepley PetscErrorCode ierr; 2367c9ba7969SMatthew G. Knepley 2368c9ba7969SMatthew G. Knepley PetscFunctionBegin; 2369c9ba7969SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &dsp);CHKERRQ(ierr); 2370c9ba7969SMatthew G. Knepley ierr = PetscDualSpaceGetDM(dsp, &dm);CHKERRQ(ierr); 2371c9ba7969SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 2372c9ba7969SMatthew G. Knepley ierr = DMGetCoordinateDim(dm, &cdim);CHKERRQ(ierr); 2373c9ba7969SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quadDef);CHKERRQ(ierr); 2374c9ba7969SMatthew G. Knepley quad = quad ? quad : quadDef; 2375c9ba7969SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, NULL, &Nq, NULL, NULL);CHKERRQ(ierr); 2376c9ba7969SMatthew G. Knepley ierr = PetscMalloc1(Nq*cdim, &cgeom->v);CHKERRQ(ierr); 2377c9ba7969SMatthew G. Knepley ierr = PetscMalloc1(Nq*cdim*cdim, &cgeom->J);CHKERRQ(ierr); 2378c9ba7969SMatthew G. Knepley ierr = PetscMalloc1(Nq*cdim*cdim, &cgeom->invJ);CHKERRQ(ierr); 2379c9ba7969SMatthew G. Knepley ierr = PetscMalloc1(Nq, &cgeom->detJ);CHKERRQ(ierr); 2380c9ba7969SMatthew G. Knepley cgeom->dim = dim; 2381c9ba7969SMatthew G. Knepley cgeom->dimEmbed = cdim; 2382c9ba7969SMatthew G. Knepley cgeom->numCells = 1; 2383c9ba7969SMatthew G. Knepley cgeom->numPoints = Nq; 2384c9ba7969SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, 0, quad, cgeom->v, cgeom->J, cgeom->invJ, cgeom->detJ);CHKERRQ(ierr); 2385c9ba7969SMatthew G. Knepley PetscFunctionReturn(0); 2386c9ba7969SMatthew G. Knepley } 2387c9ba7969SMatthew G. Knepley 2388c9ba7969SMatthew G. Knepley PetscErrorCode PetscFEDestroyCellGeometry(PetscFE fe, PetscFEGeom *cgeom) 2389c9ba7969SMatthew G. Knepley { 2390c9ba7969SMatthew G. Knepley PetscErrorCode ierr; 2391c9ba7969SMatthew G. Knepley 2392c9ba7969SMatthew G. Knepley PetscFunctionBegin; 2393c9ba7969SMatthew G. Knepley ierr = PetscFree(cgeom->v);CHKERRQ(ierr); 2394c9ba7969SMatthew G. Knepley ierr = PetscFree(cgeom->J);CHKERRQ(ierr); 2395c9ba7969SMatthew G. Knepley ierr = PetscFree(cgeom->invJ);CHKERRQ(ierr); 2396c9ba7969SMatthew G. Knepley ierr = PetscFree(cgeom->detJ);CHKERRQ(ierr); 2397c9ba7969SMatthew G. Knepley PetscFunctionReturn(0); 2398c9ba7969SMatthew G. Knepley } 2399