137045ce4SJed Brown /* Discretization tools */ 237045ce4SJed Brown 3a6fc04d9SSatish Balay #include <petscconf.h> 4a6fc04d9SSatish Balay #if defined(PETSC_HAVE_MATHIMF_H) 5a6fc04d9SSatish Balay #include <mathimf.h> /* this needs to be included before math.h */ 6a6fc04d9SSatish Balay #endif 7a6fc04d9SSatish Balay 80c35b76eSJed Brown #include <petscdt.h> /*I "petscdt.h" I*/ 937045ce4SJed Brown #include <petscblaslapack.h> 10194825f6SJed Brown #include <petsc-private/petscimpl.h> 11665c2dedSJed Brown #include <petscviewer.h> 1259804f93SMatthew G. Knepley #include <petscdmplex.h> 1359804f93SMatthew G. Knepley #include <petscdmshell.h> 1437045ce4SJed Brown 1537045ce4SJed Brown #undef __FUNCT__ 16bfa639d9SMatthew G. Knepley #define __FUNCT__ "PetscQuadratureDestroy" 17bfa639d9SMatthew G. Knepley PetscErrorCode PetscQuadratureDestroy(PetscQuadrature *q) 18bfa639d9SMatthew G. Knepley { 19bfa639d9SMatthew G. Knepley PetscErrorCode ierr; 20bfa639d9SMatthew G. Knepley 21bfa639d9SMatthew G. Knepley PetscFunctionBegin; 22bfa639d9SMatthew G. Knepley ierr = PetscFree(q->quadPoints);CHKERRQ(ierr); 23bfa639d9SMatthew G. Knepley ierr = PetscFree(q->quadWeights);CHKERRQ(ierr); 24bfa639d9SMatthew G. Knepley PetscFunctionReturn(0); 25bfa639d9SMatthew G. Knepley } 26bfa639d9SMatthew G. Knepley 27bfa639d9SMatthew G. Knepley #undef __FUNCT__ 2837045ce4SJed Brown #define __FUNCT__ "PetscDTLegendreEval" 2937045ce4SJed Brown /*@ 3037045ce4SJed Brown PetscDTLegendreEval - evaluate Legendre polynomial at points 3137045ce4SJed Brown 3237045ce4SJed Brown Not Collective 3337045ce4SJed Brown 3437045ce4SJed Brown Input Arguments: 3537045ce4SJed Brown + npoints - number of spatial points to evaluate at 3637045ce4SJed Brown . points - array of locations to evaluate at 3737045ce4SJed Brown . ndegree - number of basis degrees to evaluate 3837045ce4SJed Brown - degrees - sorted array of degrees to evaluate 3937045ce4SJed Brown 4037045ce4SJed Brown Output Arguments: 410298fd71SBarry Smith + B - row-oriented basis evaluation matrix B[point*ndegree + degree] (dimension npoints*ndegrees, allocated by caller) (or NULL) 420298fd71SBarry Smith . D - row-oriented derivative evaluation matrix (or NULL) 430298fd71SBarry Smith - D2 - row-oriented second derivative evaluation matrix (or NULL) 4437045ce4SJed Brown 4537045ce4SJed Brown Level: intermediate 4637045ce4SJed Brown 4737045ce4SJed Brown .seealso: PetscDTGaussQuadrature() 4837045ce4SJed Brown @*/ 4937045ce4SJed Brown PetscErrorCode PetscDTLegendreEval(PetscInt npoints,const PetscReal *points,PetscInt ndegree,const PetscInt *degrees,PetscReal *B,PetscReal *D,PetscReal *D2) 5037045ce4SJed Brown { 5137045ce4SJed Brown PetscInt i,maxdegree; 5237045ce4SJed Brown 5337045ce4SJed Brown PetscFunctionBegin; 5437045ce4SJed Brown if (!npoints || !ndegree) PetscFunctionReturn(0); 5537045ce4SJed Brown maxdegree = degrees[ndegree-1]; 5637045ce4SJed Brown for (i=0; i<npoints; i++) { 5737045ce4SJed Brown PetscReal pm1,pm2,pd1,pd2,pdd1,pdd2,x; 5837045ce4SJed Brown PetscInt j,k; 5937045ce4SJed Brown x = points[i]; 6037045ce4SJed Brown pm2 = 0; 6137045ce4SJed Brown pm1 = 1; 6237045ce4SJed Brown pd2 = 0; 6337045ce4SJed Brown pd1 = 0; 6437045ce4SJed Brown pdd2 = 0; 6537045ce4SJed Brown pdd1 = 0; 6637045ce4SJed Brown k = 0; 6737045ce4SJed Brown if (degrees[k] == 0) { 6837045ce4SJed Brown if (B) B[i*ndegree+k] = pm1; 6937045ce4SJed Brown if (D) D[i*ndegree+k] = pd1; 7037045ce4SJed Brown if (D2) D2[i*ndegree+k] = pdd1; 7137045ce4SJed Brown k++; 7237045ce4SJed Brown } 7337045ce4SJed Brown for (j=1; j<=maxdegree; j++,k++) { 7437045ce4SJed Brown PetscReal p,d,dd; 7537045ce4SJed Brown p = ((2*j-1)*x*pm1 - (j-1)*pm2)/j; 7637045ce4SJed Brown d = pd2 + (2*j-1)*pm1; 7737045ce4SJed Brown dd = pdd2 + (2*j-1)*pd1; 7837045ce4SJed Brown pm2 = pm1; 7937045ce4SJed Brown pm1 = p; 8037045ce4SJed Brown pd2 = pd1; 8137045ce4SJed Brown pd1 = d; 8237045ce4SJed Brown pdd2 = pdd1; 8337045ce4SJed Brown pdd1 = dd; 8437045ce4SJed Brown if (degrees[k] == j) { 8537045ce4SJed Brown if (B) B[i*ndegree+k] = p; 8637045ce4SJed Brown if (D) D[i*ndegree+k] = d; 8737045ce4SJed Brown if (D2) D2[i*ndegree+k] = dd; 8837045ce4SJed Brown } 8937045ce4SJed Brown } 9037045ce4SJed Brown } 9137045ce4SJed Brown PetscFunctionReturn(0); 9237045ce4SJed Brown } 9337045ce4SJed Brown 9437045ce4SJed Brown #undef __FUNCT__ 9537045ce4SJed Brown #define __FUNCT__ "PetscDTGaussQuadrature" 9637045ce4SJed Brown /*@ 9737045ce4SJed Brown PetscDTGaussQuadrature - create Gauss quadrature 9837045ce4SJed Brown 9937045ce4SJed Brown Not Collective 10037045ce4SJed Brown 10137045ce4SJed Brown Input Arguments: 10237045ce4SJed Brown + npoints - number of points 10337045ce4SJed Brown . a - left end of interval (often-1) 10437045ce4SJed Brown - b - right end of interval (often +1) 10537045ce4SJed Brown 10637045ce4SJed Brown Output Arguments: 10737045ce4SJed Brown + x - quadrature points 10837045ce4SJed Brown - w - quadrature weights 10937045ce4SJed Brown 11037045ce4SJed Brown Level: intermediate 11137045ce4SJed Brown 11237045ce4SJed Brown References: 11337045ce4SJed Brown Golub and Welsch, Calculation of Quadrature Rules, Math. Comp. 23(106), 221--230, 1969. 11437045ce4SJed Brown 11537045ce4SJed Brown .seealso: PetscDTLegendreEval() 11637045ce4SJed Brown @*/ 11737045ce4SJed Brown PetscErrorCode PetscDTGaussQuadrature(PetscInt npoints,PetscReal a,PetscReal b,PetscReal *x,PetscReal *w) 11837045ce4SJed Brown { 11937045ce4SJed Brown PetscErrorCode ierr; 12037045ce4SJed Brown PetscInt i; 12137045ce4SJed Brown PetscReal *work; 12237045ce4SJed Brown PetscScalar *Z; 12337045ce4SJed Brown PetscBLASInt N,LDZ,info; 12437045ce4SJed Brown 12537045ce4SJed Brown PetscFunctionBegin; 12637045ce4SJed Brown /* Set up the Golub-Welsch system */ 12737045ce4SJed Brown for (i=0; i<npoints; i++) { 12837045ce4SJed Brown x[i] = 0; /* diagonal is 0 */ 12937045ce4SJed Brown if (i) w[i-1] = 0.5 / PetscSqrtReal(1 - 1./PetscSqr(2*i)); 13037045ce4SJed Brown } 13137045ce4SJed Brown ierr = PetscRealView(npoints-1,w,PETSC_VIEWER_STDOUT_SELF);CHKERRQ(ierr); 13237045ce4SJed Brown ierr = PetscMalloc2(npoints*npoints,PetscScalar,&Z,PetscMax(1,2*npoints-2),PetscReal,&work);CHKERRQ(ierr); 133c5df96a5SBarry Smith ierr = PetscBLASIntCast(npoints,&N);CHKERRQ(ierr); 13437045ce4SJed Brown LDZ = N; 13537045ce4SJed Brown ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 1368b83055fSJed Brown PetscStackCallBLAS("LAPACKsteqr",LAPACKsteqr_("I",&N,x,w,Z,&LDZ,work,&info)); 13737045ce4SJed Brown ierr = PetscFPTrapPop();CHKERRQ(ierr); 1381c3d6f74SJed Brown if (info) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"xSTEQR error"); 13937045ce4SJed Brown 14037045ce4SJed Brown for (i=0; i<(npoints+1)/2; i++) { 14137045ce4SJed Brown PetscReal y = 0.5 * (-x[i] + x[npoints-i-1]); /* enforces symmetry */ 14237045ce4SJed Brown x[i] = (a+b)/2 - y*(b-a)/2; 14337045ce4SJed Brown x[npoints-i-1] = (a+b)/2 + y*(b-a)/2; 1440d644c17SKarl Rupp 14537045ce4SJed Brown w[i] = w[npoints-1-i] = (b-a)*PetscSqr(0.5*PetscAbsScalar(Z[i*npoints] + Z[(npoints-i-1)*npoints])); 14637045ce4SJed Brown } 14737045ce4SJed Brown ierr = PetscFree2(Z,work);CHKERRQ(ierr); 14837045ce4SJed Brown PetscFunctionReturn(0); 14937045ce4SJed Brown } 150194825f6SJed Brown 151194825f6SJed Brown #undef __FUNCT__ 152494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTFactorial_Internal" 153494e7359SMatthew G. Knepley /* Evaluates the nth jacobi polynomial with weight parameters a,b at a point x. 154494e7359SMatthew G. Knepley Recurrence relations implemented from the pseudocode given in Karniadakis and Sherwin, Appendix B */ 155494e7359SMatthew G. Knepley PETSC_STATIC_INLINE PetscErrorCode PetscDTFactorial_Internal(PetscInt n, PetscReal *factorial) 156494e7359SMatthew G. Knepley { 157494e7359SMatthew G. Knepley PetscReal f = 1.0; 158494e7359SMatthew G. Knepley PetscInt i; 159494e7359SMatthew G. Knepley 160494e7359SMatthew G. Knepley PetscFunctionBegin; 161494e7359SMatthew G. Knepley for (i = 1; i < n+1; ++i) f *= i; 162494e7359SMatthew G. Knepley *factorial = f; 163494e7359SMatthew G. Knepley PetscFunctionReturn(0); 164494e7359SMatthew G. Knepley } 165494e7359SMatthew G. Knepley 166494e7359SMatthew G. Knepley #undef __FUNCT__ 167494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTComputeJacobi" 168494e7359SMatthew G. Knepley /* Evaluates the nth jacobi polynomial with weight parameters a,b at a point x. 169494e7359SMatthew G. Knepley Recurrence relations implemented from the pseudocode given in Karniadakis and Sherwin, Appendix B */ 170494e7359SMatthew G. Knepley PETSC_STATIC_INLINE PetscErrorCode PetscDTComputeJacobi(PetscReal a, PetscReal b, PetscInt n, PetscReal x, PetscReal *P) 171494e7359SMatthew G. Knepley { 172494e7359SMatthew G. Knepley PetscReal apb, pn1, pn2; 173494e7359SMatthew G. Knepley PetscInt k; 174494e7359SMatthew G. Knepley 175494e7359SMatthew G. Knepley PetscFunctionBegin; 176494e7359SMatthew G. Knepley if (!n) {*P = 1.0; PetscFunctionReturn(0);} 177494e7359SMatthew G. Knepley if (n == 1) {*P = 0.5 * (a - b + (a + b + 2.0) * x); PetscFunctionReturn(0);} 178494e7359SMatthew G. Knepley apb = a + b; 179494e7359SMatthew G. Knepley pn2 = 1.0; 180494e7359SMatthew G. Knepley pn1 = 0.5 * (a - b + (apb + 2.0) * x); 181494e7359SMatthew G. Knepley *P = 0.0; 182494e7359SMatthew G. Knepley for (k = 2; k < n+1; ++k) { 183494e7359SMatthew G. Knepley PetscReal a1 = 2.0 * k * (k + apb) * (2.0*k + apb - 2.0); 184494e7359SMatthew G. Knepley PetscReal a2 = (2.0 * k + apb - 1.0) * (a*a - b*b); 185494e7359SMatthew G. Knepley PetscReal a3 = (2.0 * k + apb - 2.0) * (2.0 * k + apb - 1.0) * (2.0 * k + apb); 186494e7359SMatthew G. Knepley PetscReal a4 = 2.0 * (k + a - 1.0) * (k + b - 1.0) * (2.0 * k + apb); 187494e7359SMatthew G. Knepley 188494e7359SMatthew G. Knepley a2 = a2 / a1; 189494e7359SMatthew G. Knepley a3 = a3 / a1; 190494e7359SMatthew G. Knepley a4 = a4 / a1; 191494e7359SMatthew G. Knepley *P = (a2 + a3 * x) * pn1 - a4 * pn2; 192494e7359SMatthew G. Knepley pn2 = pn1; 193494e7359SMatthew G. Knepley pn1 = *P; 194494e7359SMatthew G. Knepley } 195494e7359SMatthew G. Knepley PetscFunctionReturn(0); 196494e7359SMatthew G. Knepley } 197494e7359SMatthew G. Knepley 198494e7359SMatthew G. Knepley #undef __FUNCT__ 199494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTComputeJacobiDerivative" 200494e7359SMatthew G. Knepley /* Evaluates the first derivative of P_{n}^{a,b} at a point x. */ 201494e7359SMatthew G. Knepley PETSC_STATIC_INLINE PetscErrorCode PetscDTComputeJacobiDerivative(PetscReal a, PetscReal b, PetscInt n, PetscReal x, PetscReal *P) 202494e7359SMatthew G. Knepley { 203494e7359SMatthew G. Knepley PetscReal nP; 204494e7359SMatthew G. Knepley PetscErrorCode ierr; 205494e7359SMatthew G. Knepley 206494e7359SMatthew G. Knepley PetscFunctionBegin; 207494e7359SMatthew G. Knepley if (!n) {*P = 0.0; PetscFunctionReturn(0);} 208494e7359SMatthew G. Knepley ierr = PetscDTComputeJacobi(a+1, b+1, n-1, x, &nP);CHKERRQ(ierr); 209494e7359SMatthew G. Knepley *P = 0.5 * (a + b + n + 1) * nP; 210494e7359SMatthew G. Knepley PetscFunctionReturn(0); 211494e7359SMatthew G. Knepley } 212494e7359SMatthew G. Knepley 213494e7359SMatthew G. Knepley #undef __FUNCT__ 214494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTMapSquareToTriangle_Internal" 215494e7359SMatthew G. Knepley /* Maps from [-1,1]^2 to the (-1,1) reference triangle */ 216494e7359SMatthew G. Knepley PETSC_STATIC_INLINE PetscErrorCode PetscDTMapSquareToTriangle_Internal(PetscReal x, PetscReal y, PetscReal *xi, PetscReal *eta) 217494e7359SMatthew G. Knepley { 218494e7359SMatthew G. Knepley PetscFunctionBegin; 219494e7359SMatthew G. Knepley *xi = 0.5 * (1.0 + x) * (1.0 - y) - 1.0; 220494e7359SMatthew G. Knepley *eta = y; 221494e7359SMatthew G. Knepley PetscFunctionReturn(0); 222494e7359SMatthew G. Knepley } 223494e7359SMatthew G. Knepley 224494e7359SMatthew G. Knepley #undef __FUNCT__ 225494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTMapCubeToTetrahedron_Internal" 226494e7359SMatthew G. Knepley /* Maps from [-1,1]^2 to the (-1,1) reference triangle */ 227494e7359SMatthew G. Knepley PETSC_STATIC_INLINE PetscErrorCode PetscDTMapCubeToTetrahedron_Internal(PetscReal x, PetscReal y, PetscReal z, PetscReal *xi, PetscReal *eta, PetscReal *zeta) 228494e7359SMatthew G. Knepley { 229494e7359SMatthew G. Knepley PetscFunctionBegin; 230494e7359SMatthew G. Knepley *xi = 0.25 * (1.0 + x) * (1.0 - y) * (1.0 - z) - 1.0; 231494e7359SMatthew G. Knepley *eta = 0.5 * (1.0 + y) * (1.0 - z) - 1.0; 232494e7359SMatthew G. Knepley *zeta = z; 233494e7359SMatthew G. Knepley PetscFunctionReturn(0); 234494e7359SMatthew G. Knepley } 235494e7359SMatthew G. Knepley 236494e7359SMatthew G. Knepley #undef __FUNCT__ 237494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTGaussJacobiQuadrature1D_Internal" 238494e7359SMatthew G. Knepley static PetscErrorCode PetscDTGaussJacobiQuadrature1D_Internal(PetscInt npoints, PetscReal a, PetscReal b, PetscReal *x, PetscReal *w) 239494e7359SMatthew G. Knepley { 240494e7359SMatthew G. Knepley PetscInt maxIter = 100; 241494e7359SMatthew G. Knepley PetscReal eps = 1.0e-8; 242a8291ba1SSatish Balay PetscReal a1, a2, a3, a4, a5, a6; 243494e7359SMatthew G. Knepley PetscInt k; 244494e7359SMatthew G. Knepley PetscErrorCode ierr; 245494e7359SMatthew G. Knepley 246494e7359SMatthew G. Knepley PetscFunctionBegin; 247a8291ba1SSatish Balay 248a8291ba1SSatish Balay a1 = pow(2, a+b+1); 249a8291ba1SSatish Balay #if defined(PETSC_HAVE_TGAMMA) 250a8291ba1SSatish Balay a2 = tgamma(a + npoints + 1); 251a8291ba1SSatish Balay a3 = tgamma(b + npoints + 1); 252a8291ba1SSatish Balay a4 = tgamma(a + b + npoints + 1); 253a8291ba1SSatish Balay #else 254a8291ba1SSatish Balay SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"tgamma() - math routine is unavailable."); 255a8291ba1SSatish Balay #endif 256a8291ba1SSatish Balay 257494e7359SMatthew G. Knepley ierr = PetscDTFactorial_Internal(npoints, &a5);CHKERRQ(ierr); 258494e7359SMatthew G. Knepley a6 = a1 * a2 * a3 / a4 / a5; 259494e7359SMatthew G. Knepley /* Computes the m roots of P_{m}^{a,b} on [-1,1] by Newton's method with Chebyshev points as initial guesses. 260494e7359SMatthew G. Knepley Algorithm implemented from the pseudocode given by Karniadakis and Sherwin and Python in FIAT */ 261494e7359SMatthew G. Knepley for (k = 0; k < npoints; ++k) { 2627f1c68b3SMatthew G. Knepley PetscReal r = -cos((2.0*k + 1.0) * PETSC_PI / (2.0 * npoints)), dP; 263494e7359SMatthew G. Knepley PetscInt j; 264494e7359SMatthew G. Knepley 265494e7359SMatthew G. Knepley if (k > 0) r = 0.5 * (r + x[k-1]); 266494e7359SMatthew G. Knepley for (j = 0; j < maxIter; ++j) { 267494e7359SMatthew G. Knepley PetscReal s = 0.0, delta, f, fp; 268494e7359SMatthew G. Knepley PetscInt i; 269494e7359SMatthew G. Knepley 270494e7359SMatthew G. Knepley for (i = 0; i < k; ++i) s = s + 1.0 / (r - x[i]); 271494e7359SMatthew G. Knepley ierr = PetscDTComputeJacobi(a, b, npoints, r, &f);CHKERRQ(ierr); 272494e7359SMatthew G. Knepley ierr = PetscDTComputeJacobiDerivative(a, b, npoints, r, &fp);CHKERRQ(ierr); 273494e7359SMatthew G. Knepley delta = f / (fp - f * s); 274494e7359SMatthew G. Knepley r = r - delta; 275494e7359SMatthew G. Knepley if (fabs(delta) < eps) break; 276494e7359SMatthew G. Knepley } 277494e7359SMatthew G. Knepley x[k] = r; 278494e7359SMatthew G. Knepley ierr = PetscDTComputeJacobiDerivative(a, b, npoints, x[k], &dP);CHKERRQ(ierr); 279494e7359SMatthew G. Knepley w[k] = a6 / (1.0 - PetscSqr(x[k])) / PetscSqr(dP); 280494e7359SMatthew G. Knepley } 281494e7359SMatthew G. Knepley PetscFunctionReturn(0); 282494e7359SMatthew G. Knepley } 283494e7359SMatthew G. Knepley 284494e7359SMatthew G. Knepley #undef __FUNCT__ 285494e7359SMatthew G. Knepley #define __FUNCT__ "PetscDTGaussJacobiQuadrature" 286fd9d31fbSMatthew G. Knepley /*@C 287494e7359SMatthew G. Knepley PetscDTGaussJacobiQuadrature - create Gauss-Jacobi quadrature for a simplex 288494e7359SMatthew G. Knepley 289494e7359SMatthew G. Knepley Not Collective 290494e7359SMatthew G. Knepley 291494e7359SMatthew G. Knepley Input Arguments: 292494e7359SMatthew G. Knepley + dim - The simplex dimension 293552aa4f7SMatthew G. Knepley . order - The quadrature order 294494e7359SMatthew G. Knepley . a - left end of interval (often-1) 295494e7359SMatthew G. Knepley - b - right end of interval (often +1) 296494e7359SMatthew G. Knepley 297494e7359SMatthew G. Knepley Output Arguments: 298552aa4f7SMatthew G. Knepley . q - A PetscQuadrature object 299494e7359SMatthew G. Knepley 300494e7359SMatthew G. Knepley Level: intermediate 301494e7359SMatthew G. Knepley 302494e7359SMatthew G. Knepley References: 303494e7359SMatthew G. Knepley Karniadakis and Sherwin. 304494e7359SMatthew G. Knepley FIAT 305494e7359SMatthew G. Knepley 306494e7359SMatthew G. Knepley .seealso: PetscDTGaussQuadrature() 307494e7359SMatthew G. Knepley @*/ 308552aa4f7SMatthew G. Knepley PetscErrorCode PetscDTGaussJacobiQuadrature(PetscInt dim, PetscInt order, PetscReal a, PetscReal b, PetscQuadrature *q) 309494e7359SMatthew G. Knepley { 310552aa4f7SMatthew G. Knepley PetscInt npoints = dim > 1 ? dim > 2 ? order*PetscSqr(order) : PetscSqr(order) : order; 311494e7359SMatthew G. Knepley PetscReal *px, *wx, *py, *wy, *pz, *wz, *x, *w; 312494e7359SMatthew G. Knepley PetscInt i, j, k; 313494e7359SMatthew G. Knepley PetscErrorCode ierr; 314494e7359SMatthew G. Knepley 315494e7359SMatthew G. Knepley PetscFunctionBegin; 316494e7359SMatthew G. Knepley if ((a != -1.0) || (b != 1.0)) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Must use default internal right now"); 317552aa4f7SMatthew G. Knepley ierr = PetscMalloc(npoints*dim * sizeof(PetscReal), &x);CHKERRQ(ierr); 318552aa4f7SMatthew G. Knepley ierr = PetscMalloc(npoints * sizeof(PetscReal), &w);CHKERRQ(ierr); 319494e7359SMatthew G. Knepley switch (dim) { 320*707aa5c5SMatthew G. Knepley case 0: 321*707aa5c5SMatthew G. Knepley ierr = PetscFree(x);CHKERRQ(ierr); 322*707aa5c5SMatthew G. Knepley ierr = PetscFree(w);CHKERRQ(ierr); 323*707aa5c5SMatthew G. Knepley ierr = PetscMalloc(1 * sizeof(PetscReal), &x);CHKERRQ(ierr); 324*707aa5c5SMatthew G. Knepley ierr = PetscMalloc(1 * sizeof(PetscReal), &w);CHKERRQ(ierr); 325*707aa5c5SMatthew G. Knepley x[0] = 0.0; 326*707aa5c5SMatthew G. Knepley w[0] = 1.0; 327*707aa5c5SMatthew G. Knepley break; 328494e7359SMatthew G. Knepley case 1: 329552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 0.0, 0.0, x, w);CHKERRQ(ierr); 330494e7359SMatthew G. Knepley break; 331494e7359SMatthew G. Knepley case 2: 332552aa4f7SMatthew G. Knepley ierr = PetscMalloc4(order,PetscReal,&px,order,PetscReal,&wx,order,PetscReal,&py,order,PetscReal,&wy);CHKERRQ(ierr); 333552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 0.0, 0.0, px, wx);CHKERRQ(ierr); 334552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 1.0, 0.0, py, wy);CHKERRQ(ierr); 335552aa4f7SMatthew G. Knepley for (i = 0; i < order; ++i) { 336552aa4f7SMatthew G. Knepley for (j = 0; j < order; ++j) { 337552aa4f7SMatthew G. Knepley ierr = PetscDTMapSquareToTriangle_Internal(px[i], py[j], &x[(i*order+j)*2+0], &x[(i*order+j)*2+1]);CHKERRQ(ierr); 338552aa4f7SMatthew G. Knepley w[i*order+j] = 0.5 * wx[i] * wy[j]; 339494e7359SMatthew G. Knepley } 340494e7359SMatthew G. Knepley } 341494e7359SMatthew G. Knepley ierr = PetscFree4(px,wx,py,wy);CHKERRQ(ierr); 342494e7359SMatthew G. Knepley break; 343494e7359SMatthew G. Knepley case 3: 344552aa4f7SMatthew G. Knepley ierr = PetscMalloc6(order,PetscReal,&px,order,PetscReal,&wx,order,PetscReal,&py,order,PetscReal,&wy,order,PetscReal,&pz,order,PetscReal,&wz);CHKERRQ(ierr); 345552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 0.0, 0.0, px, wx);CHKERRQ(ierr); 346552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 1.0, 0.0, py, wy);CHKERRQ(ierr); 347552aa4f7SMatthew G. Knepley ierr = PetscDTGaussJacobiQuadrature1D_Internal(order, 2.0, 0.0, pz, wz);CHKERRQ(ierr); 348552aa4f7SMatthew G. Knepley for (i = 0; i < order; ++i) { 349552aa4f7SMatthew G. Knepley for (j = 0; j < order; ++j) { 350552aa4f7SMatthew G. Knepley for (k = 0; k < order; ++k) { 351552aa4f7SMatthew G. Knepley ierr = PetscDTMapCubeToTetrahedron_Internal(px[i], py[j], pz[k], &x[((i*order+j)*order+k)*3+0], &x[((i*order+j)*order+k)*3+1], &x[((i*order+j)*order+k)*3+2]);CHKERRQ(ierr); 352552aa4f7SMatthew G. Knepley w[(i*order+j)*order+k] = 0.125 * wx[i] * wy[j] * wz[k]; 353494e7359SMatthew G. Knepley } 354494e7359SMatthew G. Knepley } 355494e7359SMatthew G. Knepley } 356494e7359SMatthew G. Knepley ierr = PetscFree6(px,wx,py,wy,pz,wz);CHKERRQ(ierr); 357494e7359SMatthew G. Knepley break; 358494e7359SMatthew G. Knepley default: 359494e7359SMatthew G. Knepley SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Cannot construct quadrature rule for dimension %d", dim); 360494e7359SMatthew G. Knepley } 361552aa4f7SMatthew G. Knepley q->numQuadPoints = npoints; 362552aa4f7SMatthew G. Knepley q->quadPoints = x; 363552aa4f7SMatthew G. Knepley q->quadWeights = w; 364494e7359SMatthew G. Knepley PetscFunctionReturn(0); 365494e7359SMatthew G. Knepley } 366494e7359SMatthew G. Knepley 367494e7359SMatthew G. Knepley #undef __FUNCT__ 368194825f6SJed Brown #define __FUNCT__ "PetscDTPseudoInverseQR" 369194825f6SJed Brown /* Overwrites A. Can only handle full-rank problems with m>=n 370194825f6SJed Brown * A in column-major format 371194825f6SJed Brown * Ainv in row-major format 372194825f6SJed Brown * tau has length m 373194825f6SJed Brown * worksize must be >= max(1,n) 374194825f6SJed Brown */ 375194825f6SJed Brown static PetscErrorCode PetscDTPseudoInverseQR(PetscInt m,PetscInt mstride,PetscInt n,PetscReal *A_in,PetscReal *Ainv_out,PetscScalar *tau,PetscInt worksize,PetscScalar *work) 376194825f6SJed Brown { 377194825f6SJed Brown PetscErrorCode ierr; 378194825f6SJed Brown PetscBLASInt M,N,K,lda,ldb,ldwork,info; 379194825f6SJed Brown PetscScalar *A,*Ainv,*R,*Q,Alpha; 380194825f6SJed Brown 381194825f6SJed Brown PetscFunctionBegin; 382194825f6SJed Brown #if defined(PETSC_USE_COMPLEX) 383194825f6SJed Brown { 384194825f6SJed Brown PetscInt i,j; 385194825f6SJed Brown ierr = PetscMalloc2(m*n,PetscScalar,&A,m*n,PetscScalar,&Ainv);CHKERRQ(ierr); 386194825f6SJed Brown for (j=0; j<n; j++) { 387194825f6SJed Brown for (i=0; i<m; i++) A[i+m*j] = A_in[i+mstride*j]; 388194825f6SJed Brown } 389194825f6SJed Brown mstride = m; 390194825f6SJed Brown } 391194825f6SJed Brown #else 392194825f6SJed Brown A = A_in; 393194825f6SJed Brown Ainv = Ainv_out; 394194825f6SJed Brown #endif 395194825f6SJed Brown 396194825f6SJed Brown ierr = PetscBLASIntCast(m,&M);CHKERRQ(ierr); 397194825f6SJed Brown ierr = PetscBLASIntCast(n,&N);CHKERRQ(ierr); 398194825f6SJed Brown ierr = PetscBLASIntCast(mstride,&lda);CHKERRQ(ierr); 399194825f6SJed Brown ierr = PetscBLASIntCast(worksize,&ldwork);CHKERRQ(ierr); 400194825f6SJed Brown ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 401194825f6SJed Brown LAPACKgeqrf_(&M,&N,A,&lda,tau,work,&ldwork,&info); 402194825f6SJed Brown ierr = PetscFPTrapPop();CHKERRQ(ierr); 403194825f6SJed Brown if (info) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"xGEQRF error"); 404194825f6SJed Brown R = A; /* Upper triangular part of A now contains R, the rest contains the elementary reflectors */ 405194825f6SJed Brown 406194825f6SJed Brown /* Extract an explicit representation of Q */ 407194825f6SJed Brown Q = Ainv; 408194825f6SJed Brown ierr = PetscMemcpy(Q,A,mstride*n*sizeof(PetscScalar));CHKERRQ(ierr); 409194825f6SJed Brown K = N; /* full rank */ 410194825f6SJed Brown LAPACKungqr_(&M,&N,&K,Q,&lda,tau,work,&ldwork,&info); 411194825f6SJed Brown if (info) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"xORGQR/xUNGQR error"); 412194825f6SJed Brown 413194825f6SJed Brown /* Compute A^{-T} = (R^{-1} Q^T)^T = Q R^{-T} */ 414194825f6SJed Brown Alpha = 1.0; 415194825f6SJed Brown ldb = lda; 416194825f6SJed Brown BLAStrsm_("Right","Upper","ConjugateTranspose","NotUnitTriangular",&M,&N,&Alpha,R,&lda,Q,&ldb); 417194825f6SJed Brown /* Ainv is Q, overwritten with inverse */ 418194825f6SJed Brown 419194825f6SJed Brown #if defined(PETSC_USE_COMPLEX) 420194825f6SJed Brown { 421194825f6SJed Brown PetscInt i; 422194825f6SJed Brown for (i=0; i<m*n; i++) Ainv_out[i] = PetscRealPart(Ainv[i]); 423194825f6SJed Brown ierr = PetscFree2(A,Ainv);CHKERRQ(ierr); 424194825f6SJed Brown } 425194825f6SJed Brown #endif 426194825f6SJed Brown PetscFunctionReturn(0); 427194825f6SJed Brown } 428194825f6SJed Brown 429194825f6SJed Brown #undef __FUNCT__ 430194825f6SJed Brown #define __FUNCT__ "PetscDTLegendreIntegrate" 431194825f6SJed Brown /* Computes integral of L_p' over intervals {(x0,x1),(x1,x2),...} */ 432194825f6SJed Brown static PetscErrorCode PetscDTLegendreIntegrate(PetscInt ninterval,const PetscReal *x,PetscInt ndegree,const PetscInt *degrees,PetscBool Transpose,PetscReal *B) 433194825f6SJed Brown { 434194825f6SJed Brown PetscErrorCode ierr; 435194825f6SJed Brown PetscReal *Bv; 436194825f6SJed Brown PetscInt i,j; 437194825f6SJed Brown 438194825f6SJed Brown PetscFunctionBegin; 439194825f6SJed Brown ierr = PetscMalloc((ninterval+1)*ndegree*sizeof(PetscReal),&Bv);CHKERRQ(ierr); 440194825f6SJed Brown /* Point evaluation of L_p on all the source vertices */ 441194825f6SJed Brown ierr = PetscDTLegendreEval(ninterval+1,x,ndegree,degrees,Bv,NULL,NULL);CHKERRQ(ierr); 442194825f6SJed Brown /* Integral over each interval: \int_a^b L_p' = L_p(b)-L_p(a) */ 443194825f6SJed Brown for (i=0; i<ninterval; i++) { 444194825f6SJed Brown for (j=0; j<ndegree; j++) { 445194825f6SJed Brown if (Transpose) B[i+ninterval*j] = Bv[(i+1)*ndegree+j] - Bv[i*ndegree+j]; 446194825f6SJed Brown else B[i*ndegree+j] = Bv[(i+1)*ndegree+j] - Bv[i*ndegree+j]; 447194825f6SJed Brown } 448194825f6SJed Brown } 449194825f6SJed Brown ierr = PetscFree(Bv);CHKERRQ(ierr); 450194825f6SJed Brown PetscFunctionReturn(0); 451194825f6SJed Brown } 452194825f6SJed Brown 453194825f6SJed Brown #undef __FUNCT__ 454194825f6SJed Brown #define __FUNCT__ "PetscDTReconstructPoly" 455194825f6SJed Brown /*@ 456194825f6SJed Brown PetscDTReconstructPoly - create matrix representing polynomial reconstruction using cell intervals and evaluation at target intervals 457194825f6SJed Brown 458194825f6SJed Brown Not Collective 459194825f6SJed Brown 460194825f6SJed Brown Input Arguments: 461194825f6SJed Brown + degree - degree of reconstruction polynomial 462194825f6SJed Brown . nsource - number of source intervals 463194825f6SJed Brown . sourcex - sorted coordinates of source cell boundaries (length nsource+1) 464194825f6SJed Brown . ntarget - number of target intervals 465194825f6SJed Brown - targetx - sorted coordinates of target cell boundaries (length ntarget+1) 466194825f6SJed Brown 467194825f6SJed Brown Output Arguments: 468194825f6SJed Brown . R - reconstruction matrix, utarget = sum_s R[t*nsource+s] * usource[s] 469194825f6SJed Brown 470194825f6SJed Brown Level: advanced 471194825f6SJed Brown 472194825f6SJed Brown .seealso: PetscDTLegendreEval() 473194825f6SJed Brown @*/ 474194825f6SJed Brown PetscErrorCode PetscDTReconstructPoly(PetscInt degree,PetscInt nsource,const PetscReal *sourcex,PetscInt ntarget,const PetscReal *targetx,PetscReal *R) 475194825f6SJed Brown { 476194825f6SJed Brown PetscErrorCode ierr; 477194825f6SJed Brown PetscInt i,j,k,*bdegrees,worksize; 478194825f6SJed Brown PetscReal xmin,xmax,center,hscale,*sourcey,*targety,*Bsource,*Bsinv,*Btarget; 479194825f6SJed Brown PetscScalar *tau,*work; 480194825f6SJed Brown 481194825f6SJed Brown PetscFunctionBegin; 482194825f6SJed Brown PetscValidRealPointer(sourcex,3); 483194825f6SJed Brown PetscValidRealPointer(targetx,5); 484194825f6SJed Brown PetscValidRealPointer(R,6); 485194825f6SJed Brown if (degree >= nsource) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Reconstruction degree %D must be less than number of source intervals %D",degree,nsource); 486194825f6SJed Brown #if defined(PETSC_USE_DEBUG) 487194825f6SJed Brown for (i=0; i<nsource; i++) { 488194825f6SJed Brown if (sourcex[i] >= sourcex[i+1]) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_CORRUPT,"Source interval %D has negative orientation (%G,%G)",i,sourcex[i],sourcex[i+1]); 489194825f6SJed Brown } 490194825f6SJed Brown for (i=0; i<ntarget; i++) { 491194825f6SJed Brown if (targetx[i] >= targetx[i+1]) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_CORRUPT,"Target interval %D has negative orientation (%G,%G)",i,targetx[i],targetx[i+1]); 492194825f6SJed Brown } 493194825f6SJed Brown #endif 494194825f6SJed Brown xmin = PetscMin(sourcex[0],targetx[0]); 495194825f6SJed Brown xmax = PetscMax(sourcex[nsource],targetx[ntarget]); 496194825f6SJed Brown center = (xmin + xmax)/2; 497194825f6SJed Brown hscale = (xmax - xmin)/2; 498194825f6SJed Brown worksize = nsource; 499194825f6SJed Brown ierr = PetscMalloc4(degree+1,PetscInt,&bdegrees,nsource+1,PetscReal,&sourcey,nsource*(degree+1),PetscReal,&Bsource,worksize,PetscScalar,&work);CHKERRQ(ierr); 50082772646SJed Brown ierr = PetscMalloc4(nsource,PetscScalar,&tau,nsource*(degree+1),PetscReal,&Bsinv,ntarget+1,PetscReal,&targety,ntarget*(degree+1),PetscReal,&Btarget);CHKERRQ(ierr); 501194825f6SJed Brown for (i=0; i<=nsource; i++) sourcey[i] = (sourcex[i]-center)/hscale; 502194825f6SJed Brown for (i=0; i<=degree; i++) bdegrees[i] = i+1; 503194825f6SJed Brown ierr = PetscDTLegendreIntegrate(nsource,sourcey,degree+1,bdegrees,PETSC_TRUE,Bsource);CHKERRQ(ierr); 504194825f6SJed Brown ierr = PetscDTPseudoInverseQR(nsource,nsource,degree+1,Bsource,Bsinv,tau,nsource,work);CHKERRQ(ierr); 505194825f6SJed Brown for (i=0; i<=ntarget; i++) targety[i] = (targetx[i]-center)/hscale; 506194825f6SJed Brown ierr = PetscDTLegendreIntegrate(ntarget,targety,degree+1,bdegrees,PETSC_FALSE,Btarget);CHKERRQ(ierr); 507194825f6SJed Brown for (i=0; i<ntarget; i++) { 508194825f6SJed Brown PetscReal rowsum = 0; 509194825f6SJed Brown for (j=0; j<nsource; j++) { 510194825f6SJed Brown PetscReal sum = 0; 511194825f6SJed Brown for (k=0; k<degree+1; k++) { 512194825f6SJed Brown sum += Btarget[i*(degree+1)+k] * Bsinv[k*nsource+j]; 513194825f6SJed Brown } 514194825f6SJed Brown R[i*nsource+j] = sum; 515194825f6SJed Brown rowsum += sum; 516194825f6SJed Brown } 517194825f6SJed Brown for (j=0; j<nsource; j++) R[i*nsource+j] /= rowsum; /* normalize each row */ 518194825f6SJed Brown } 519194825f6SJed Brown ierr = PetscFree4(bdegrees,sourcey,Bsource,work);CHKERRQ(ierr); 520194825f6SJed Brown ierr = PetscFree4(tau,Bsinv,targety,Btarget);CHKERRQ(ierr); 521194825f6SJed Brown PetscFunctionReturn(0); 522194825f6SJed Brown } 523