1ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 2af0996ceSBarry Smith #include <petsc/private/isimpl.h> 3e10fd815SStefano Zampini #include <petsc/private/glvisviewerimpl.h> 42764a2aaSMatthew G. Knepley #include <petscds.h> 547c6ae99SBarry Smith 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 8dce8aebaSBarry Smith separate components `DM` in a `DMCOMPOSITE` to build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1020f4b53cSBarry Smith Logically Collective; No Fortran Support 1147c6ae99SBarry Smith 12d8d19677SJose E. Roman Input Parameters: 1347c6ae99SBarry Smith + dm - the composite object 1460225df5SJacob Faibussowitsch - FormCoupleLocations - routine to set the nonzero locations in the matrix 1547c6ae99SBarry Smith 1647c6ae99SBarry Smith Level: advanced 1747c6ae99SBarry Smith 18dce8aebaSBarry Smith Note: 19dce8aebaSBarry Smith See `DMSetApplicationContext()` and `DMGetApplicationContext()` for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 22dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 2347c6ae99SBarry Smith @*/ 24d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeSetCoupling(DM dm, PetscErrorCode (*FormCoupleLocations)(DM, Mat, PetscInt *, PetscInt *, PetscInt, PetscInt, PetscInt, PetscInt)) 25d71ae5a4SJacob Faibussowitsch { 2647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 2771b14b3eSStefano Zampini PetscBool flg; 2847c6ae99SBarry Smith 2947c6ae99SBarry Smith PetscFunctionBegin; 309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 317a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 3247c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3447c6ae99SBarry Smith } 3547c6ae99SBarry Smith 3666976f2fSJacob Faibussowitsch static PetscErrorCode DMDestroy_Composite(DM dm) 37d71ae5a4SJacob Faibussowitsch { 3847c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith PetscFunctionBegin; 4247c6ae99SBarry Smith next = com->next; 4347c6ae99SBarry Smith while (next) { 4447c6ae99SBarry Smith prev = next; 4547c6ae99SBarry Smith next = next->next; 469566063dSJacob Faibussowitsch PetscCall(DMDestroy(&prev->dm)); 479566063dSJacob Faibussowitsch PetscCall(PetscFree(prev->grstarts)); 489566063dSJacob Faibussowitsch PetscCall(PetscFree(prev)); 4947c6ae99SBarry Smith } 509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)dm, "DMSetUpGLVisViewer_C", NULL)); 51435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 529566063dSJacob Faibussowitsch PetscCall(PetscFree(com)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5447c6ae99SBarry Smith } 5547c6ae99SBarry Smith 5666976f2fSJacob Faibussowitsch static PetscErrorCode DMView_Composite(DM dm, PetscViewer v) 57d71ae5a4SJacob Faibussowitsch { 589f196a02SMartin Diehl PetscBool isascii; 5947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 6047c6ae99SBarry Smith 6147c6ae99SBarry Smith PetscFunctionBegin; 629f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)v, PETSCVIEWERASCII, &isascii)); 639f196a02SMartin Diehl if (isascii) { 6447c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6547c6ae99SBarry Smith PetscInt i; 6647c6ae99SBarry Smith 679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "DM (%s)\n", ((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix")); 6863a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " contains %" PetscInt_FMT " DMs\n", com->nDM)); 699566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 7047c6ae99SBarry Smith for (i = 0; lnk; lnk = lnk->next, i++) { 7163a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "Link %" PetscInt_FMT ": DM of type %s\n", i, ((PetscObject)lnk->dm)->type_name)); 729566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 739566063dSJacob Faibussowitsch PetscCall(DMView(lnk->dm, v)); 749566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7547c6ae99SBarry Smith } 769566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7747c6ae99SBarry Smith } 783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7947c6ae99SBarry Smith } 8047c6ae99SBarry Smith 8147c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8266976f2fSJacob Faibussowitsch static PetscErrorCode DMSetUp_Composite(DM dm) 83d71ae5a4SJacob Faibussowitsch { 8447c6ae99SBarry Smith PetscInt nprev = 0; 8547c6ae99SBarry Smith PetscMPIInt rank, size; 8647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 8747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 8847c6ae99SBarry Smith PetscLayout map; 8947c6ae99SBarry Smith 9047c6ae99SBarry Smith PetscFunctionBegin; 9128b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Packer has already been setup"); 929566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(PetscObjectComm((PetscObject)dm), &map)); 939566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetLocalSize(map, com->n)); 949566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(map, PETSC_DETERMINE)); 959566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetBlockSize(map, 1)); 969566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(map)); 979566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetSize(map, &com->N)); 989566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetRange(map, &com->rstart, NULL)); 999566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&map)); 10047c6ae99SBarry Smith 1019ae5db72SJed Brown /* now set the rstart for each linked vector */ 1029566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 1039566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size)); 10447c6ae99SBarry Smith while (next) { 10547c6ae99SBarry Smith next->rstart = nprev; 10606ebdd98SJed Brown nprev += next->n; 10747c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 1089566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &next->grstarts)); 1099566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgather(&next->grstart, 1, MPIU_INT, next->grstarts, 1, MPIU_INT, PetscObjectComm((PetscObject)dm))); 11047c6ae99SBarry Smith next = next->next; 11147c6ae99SBarry Smith } 11247c6ae99SBarry Smith com->setup = PETSC_TRUE; 1133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11447c6ae99SBarry Smith } 11547c6ae99SBarry Smith 11673e31fe2SJed Brown /*@ 117aaa8cc7dSPierre Jolivet DMCompositeGetNumberDM - Gets the number of `DM` objects in the `DMCOMPOSITE` 11847c6ae99SBarry Smith representation. 11947c6ae99SBarry Smith 12047c6ae99SBarry Smith Not Collective 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith Input Parameter: 123dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 12447c6ae99SBarry Smith 12547c6ae99SBarry Smith Output Parameter: 126dce8aebaSBarry Smith . nDM - the number of `DM` 12747c6ae99SBarry Smith 12847c6ae99SBarry Smith Level: beginner 12947c6ae99SBarry Smith 130dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 13147c6ae99SBarry Smith @*/ 132d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetNumberDM(DM dm, PetscInt *nDM) 133d71ae5a4SJacob Faibussowitsch { 13447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 13571b14b3eSStefano Zampini PetscBool flg; 1365fd66863SKarl Rupp 13747c6ae99SBarry Smith PetscFunctionBegin; 13847c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 1399566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1407a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 14147c6ae99SBarry Smith *nDM = com->nDM; 1423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14347c6ae99SBarry Smith } 14447c6ae99SBarry Smith 14547c6ae99SBarry Smith /*@C 14647c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 14747c6ae99SBarry Smith representation. 14847c6ae99SBarry Smith 14920f4b53cSBarry Smith Collective 15047c6ae99SBarry Smith 1519ae5db72SJed Brown Input Parameters: 152dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 1539ae5db72SJed Brown - gvec - the global vector 1549ae5db72SJed Brown 1552fe279fdSBarry Smith Output Parameter: 156a4e35b19SJacob Faibussowitsch . ... - the packed parallel vectors, `NULL` for those that are not needed 15747c6ae99SBarry Smith 15847c6ae99SBarry Smith Level: advanced 15947c6ae99SBarry Smith 160dce8aebaSBarry Smith Note: 161dce8aebaSBarry Smith Use `DMCompositeRestoreAccess()` to return the vectors when you no longer need them 162dce8aebaSBarry Smith 163dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetEntries()`, `DMCompositeScatter()` 16447c6ae99SBarry Smith @*/ 165d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetAccess(DM dm, Vec gvec, ...) 166d71ae5a4SJacob Faibussowitsch { 16747c6ae99SBarry Smith va_list Argp; 16847c6ae99SBarry Smith struct DMCompositeLink *next; 16947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 1705edff71fSBarry Smith PetscInt readonly; 17171b14b3eSStefano Zampini PetscBool flg; 17247c6ae99SBarry Smith 17347c6ae99SBarry Smith PetscFunctionBegin; 17447c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 17547c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 1769566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1777a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 17847c6ae99SBarry Smith next = com->next; 17948a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 18047c6ae99SBarry Smith 1819566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 18215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 18347c6ae99SBarry Smith va_start(Argp, gvec); 18447c6ae99SBarry Smith while (next) { 18547c6ae99SBarry Smith Vec *vec; 18647c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 1879ae5db72SJed Brown if (vec) { 1889566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, vec)); 1895edff71fSBarry Smith if (readonly) { 1905edff71fSBarry Smith const PetscScalar *array; 1919566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 1929566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 1939566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(*vec)); 1949566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 1955edff71fSBarry Smith } else { 1965edff71fSBarry Smith PetscScalar *array; 1979566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 1989566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 1999566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 20047c6ae99SBarry Smith } 2015edff71fSBarry Smith } 20247c6ae99SBarry Smith next = next->next; 20347c6ae99SBarry Smith } 20447c6ae99SBarry Smith va_end(Argp); 2053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20647c6ae99SBarry Smith } 20747c6ae99SBarry Smith 2085d83a8b1SBarry Smith /*@ 209f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 210f73e5cebSJed Brown representation. 211f73e5cebSJed Brown 21220f4b53cSBarry Smith Collective 213f73e5cebSJed Brown 214f73e5cebSJed Brown Input Parameters: 215dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 216f73e5cebSJed Brown . pvec - packed vector 217f73e5cebSJed Brown . nwanted - number of vectors wanted 218ce78bad3SBarry Smith - wanted - sorted array of integers indicating thde vectors wanted, or `NULL` to get all vectors, length `nwanted` 219f73e5cebSJed Brown 2202fe279fdSBarry Smith Output Parameter: 221f13dfd9eSBarry Smith . vecs - array of requested global vectors (must be previously allocated and of length `nwanted`) 222f73e5cebSJed Brown 223f73e5cebSJed Brown Level: advanced 224f73e5cebSJed Brown 225dce8aebaSBarry Smith Note: 226dce8aebaSBarry Smith Use `DMCompositeRestoreAccessArray()` to return the vectors when you no longer need them 227dce8aebaSBarry Smith 228dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetAccess()`, `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 229f73e5cebSJed Brown @*/ 2305d83a8b1SBarry Smith PetscErrorCode DMCompositeGetAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 231d71ae5a4SJacob Faibussowitsch { 232f73e5cebSJed Brown struct DMCompositeLink *link; 233f73e5cebSJed Brown PetscInt i, wnum; 234f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 235bee642f7SBarry Smith PetscInt readonly; 23671b14b3eSStefano Zampini PetscBool flg; 237f73e5cebSJed Brown 238f73e5cebSJed Brown PetscFunctionBegin; 239f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 240f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 2419566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 2427a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 24348a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 244f73e5cebSJed Brown 2459566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 246f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 247f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 248f73e5cebSJed Brown Vec v; 2499566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(link->dm, &v)); 250bee642f7SBarry Smith if (readonly) { 251bee642f7SBarry Smith const PetscScalar *array; 2529566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 2539566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2549566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 2559566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 256bee642f7SBarry Smith } else { 257bee642f7SBarry Smith PetscScalar *array; 2589566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 2599566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2609566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 261bee642f7SBarry Smith } 262f73e5cebSJed Brown vecs[wnum++] = v; 263f73e5cebSJed Brown } 264f73e5cebSJed Brown } 2653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 266f73e5cebSJed Brown } 267f73e5cebSJed Brown 2685d83a8b1SBarry Smith /*@ 2697ac2b803SAlex Fikl DMCompositeGetLocalAccessArray - Allows one to access the individual 2707ac2b803SAlex Fikl packed vectors in their local representation. 2717ac2b803SAlex Fikl 27220f4b53cSBarry Smith Collective 2737ac2b803SAlex Fikl 2747ac2b803SAlex Fikl Input Parameters: 275dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 2767ac2b803SAlex Fikl . pvec - packed vector 2777ac2b803SAlex Fikl . nwanted - number of vectors wanted 278f13dfd9eSBarry Smith - wanted - sorted array of vectors wanted, or `NULL` to get all vectors, length `nwanted` 2797ac2b803SAlex Fikl 2802fe279fdSBarry Smith Output Parameter: 281f13dfd9eSBarry Smith . vecs - array of requested local vectors (must be allocated and of length `nwanted`) 2827ac2b803SAlex Fikl 2837ac2b803SAlex Fikl Level: advanced 2847ac2b803SAlex Fikl 285dce8aebaSBarry Smith Note: 286dce8aebaSBarry Smith Use `DMCompositeRestoreLocalAccessArray()` to return the vectors 287dce8aebaSBarry Smith when you no longer need them. 288dce8aebaSBarry Smith 289dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreLocalAccessArray()`, `DMCompositeGetAccess()`, 290db781477SPatrick Sanan `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 2917ac2b803SAlex Fikl @*/ 2925d83a8b1SBarry Smith PetscErrorCode DMCompositeGetLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 293d71ae5a4SJacob Faibussowitsch { 2947ac2b803SAlex Fikl struct DMCompositeLink *link; 2957ac2b803SAlex Fikl PetscInt i, wnum; 2967ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 2977ac2b803SAlex Fikl PetscInt readonly; 2987ac2b803SAlex Fikl PetscInt nlocal = 0; 29971b14b3eSStefano Zampini PetscBool flg; 3007ac2b803SAlex Fikl 3017ac2b803SAlex Fikl PetscFunctionBegin; 3027ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 3037ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 3049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3057a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 30648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 3077ac2b803SAlex Fikl 3089566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 3097ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 3107ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 3117ac2b803SAlex Fikl Vec v; 3129566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(link->dm, &v)); 3137ac2b803SAlex Fikl if (readonly) { 3147ac2b803SAlex Fikl const PetscScalar *array; 3159566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 3169566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 317b1c3483dSMark Adams // this method does not make sense. The local vectors are not updated with a global-to-local and the user can not do it because it is locked 3189566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 3199566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 3207ac2b803SAlex Fikl } else { 3217ac2b803SAlex Fikl PetscScalar *array; 3229566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 3239566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 3249566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 3257ac2b803SAlex Fikl } 3267ac2b803SAlex Fikl vecs[wnum++] = v; 3277ac2b803SAlex Fikl } 3287ac2b803SAlex Fikl 3297ac2b803SAlex Fikl nlocal += link->nlocal; 3307ac2b803SAlex Fikl } 3313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3327ac2b803SAlex Fikl } 3337ac2b803SAlex Fikl 33447c6ae99SBarry Smith /*@C 335dce8aebaSBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with `DMCompositeGetAccess()` 33647c6ae99SBarry Smith representation. 33747c6ae99SBarry Smith 33820f4b53cSBarry Smith Collective 33947c6ae99SBarry Smith 3409ae5db72SJed Brown Input Parameters: 341dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 34247c6ae99SBarry Smith . gvec - the global vector 343a4e35b19SJacob Faibussowitsch - ... - the individual parallel vectors, `NULL` for those that are not needed 34447c6ae99SBarry Smith 34547c6ae99SBarry Smith Level: advanced 34647c6ae99SBarry Smith 347dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 348db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeScatter()`, 34942747ad1SJacob Faibussowitsch `DMCompositeGetAccess()` 35047c6ae99SBarry Smith @*/ 351d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreAccess(DM dm, Vec gvec, ...) 352d71ae5a4SJacob Faibussowitsch { 35347c6ae99SBarry Smith va_list Argp; 35447c6ae99SBarry Smith struct DMCompositeLink *next; 35547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 3565edff71fSBarry Smith PetscInt readonly; 35771b14b3eSStefano Zampini PetscBool flg; 35847c6ae99SBarry Smith 35947c6ae99SBarry Smith PetscFunctionBegin; 36047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 36147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 3629566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3637a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 36447c6ae99SBarry Smith next = com->next; 36548a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 36647c6ae99SBarry Smith 3679566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 36815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 36947c6ae99SBarry Smith va_start(Argp, gvec); 37047c6ae99SBarry Smith while (next) { 37147c6ae99SBarry Smith Vec *vec; 37247c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 3739ae5db72SJed Brown if (vec) { 3749566063dSJacob Faibussowitsch PetscCall(VecResetArray(*vec)); 3751baa6e33SBarry Smith if (readonly) PetscCall(VecLockReadPop(*vec)); 3769566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, vec)); 37747c6ae99SBarry Smith } 37847c6ae99SBarry Smith next = next->next; 37947c6ae99SBarry Smith } 38047c6ae99SBarry Smith va_end(Argp); 3813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38247c6ae99SBarry Smith } 38347c6ae99SBarry Smith 3845d83a8b1SBarry Smith /*@ 385dce8aebaSBarry Smith DMCompositeRestoreAccessArray - Returns the vectors obtained with `DMCompositeGetAccessArray()` 386f73e5cebSJed Brown 38720f4b53cSBarry Smith Collective 388f73e5cebSJed Brown 389f73e5cebSJed Brown Input Parameters: 390dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 391f73e5cebSJed Brown . pvec - packed vector 392f73e5cebSJed Brown . nwanted - number of vectors wanted 393f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 394f13dfd9eSBarry Smith - vecs - array of global vectors 395f73e5cebSJed Brown 396f73e5cebSJed Brown Level: advanced 397f73e5cebSJed Brown 398dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 399f73e5cebSJed Brown @*/ 4005d83a8b1SBarry Smith PetscErrorCode DMCompositeRestoreAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 401d71ae5a4SJacob Faibussowitsch { 402f73e5cebSJed Brown struct DMCompositeLink *link; 403f73e5cebSJed Brown PetscInt i, wnum; 404f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 405bee642f7SBarry Smith PetscInt readonly; 40671b14b3eSStefano Zampini PetscBool flg; 407f73e5cebSJed Brown 408f73e5cebSJed Brown PetscFunctionBegin; 409f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 410f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4119566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4127a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 41348a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 414f73e5cebSJed Brown 4159566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 416f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 417f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 4189566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 41948a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4209566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(link->dm, &vecs[wnum])); 421f73e5cebSJed Brown wnum++; 422f73e5cebSJed Brown } 423f73e5cebSJed Brown } 4243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 425f73e5cebSJed Brown } 426f73e5cebSJed Brown 4275d83a8b1SBarry Smith /*@ 428dce8aebaSBarry Smith DMCompositeRestoreLocalAccessArray - Returns the vectors obtained with `DMCompositeGetLocalAccessArray()`. 4297ac2b803SAlex Fikl 43020f4b53cSBarry Smith Collective 4317ac2b803SAlex Fikl 4327ac2b803SAlex Fikl Input Parameters: 433dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 4347ac2b803SAlex Fikl . pvec - packed vector 4357ac2b803SAlex Fikl . nwanted - number of vectors wanted 436f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 437f13dfd9eSBarry Smith - vecs - array of local vectors 4387ac2b803SAlex Fikl 4397ac2b803SAlex Fikl Level: advanced 4407ac2b803SAlex Fikl 441dce8aebaSBarry Smith Note: 442f13dfd9eSBarry Smith `nwanted` and `wanted` must match the values given to `DMCompositeGetLocalAccessArray()` 4437ac2b803SAlex Fikl otherwise the call will fail. 4447ac2b803SAlex Fikl 445dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetLocalAccessArray()`, `DMCompositeRestoreAccessArray()`, 446db781477SPatrick Sanan `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, 447db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeGather()` 4487ac2b803SAlex Fikl @*/ 4495d83a8b1SBarry Smith PetscErrorCode DMCompositeRestoreLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec *vecs) 450d71ae5a4SJacob Faibussowitsch { 4517ac2b803SAlex Fikl struct DMCompositeLink *link; 4527ac2b803SAlex Fikl PetscInt i, wnum; 4537ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 4547ac2b803SAlex Fikl PetscInt readonly; 45571b14b3eSStefano Zampini PetscBool flg; 4567ac2b803SAlex Fikl 4577ac2b803SAlex Fikl PetscFunctionBegin; 4587ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 4597ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4609566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4617a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 46248a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 4637ac2b803SAlex Fikl 4649566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 4657ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 4667ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 4679566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 46848a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4699566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(link->dm, &vecs[wnum])); 4707ac2b803SAlex Fikl wnum++; 4717ac2b803SAlex Fikl } 4727ac2b803SAlex Fikl } 4733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4747ac2b803SAlex Fikl } 4757ac2b803SAlex Fikl 47647c6ae99SBarry Smith /*@C 47747c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 47847c6ae99SBarry Smith 47920f4b53cSBarry Smith Collective 48047c6ae99SBarry Smith 4819ae5db72SJed Brown Input Parameters: 482dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 48347c6ae99SBarry Smith . gvec - the global vector 484a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for those that are not needed 48547c6ae99SBarry Smith 48647c6ae99SBarry Smith Level: advanced 48747c6ae99SBarry Smith 488dce8aebaSBarry Smith Note: 489dce8aebaSBarry Smith `DMCompositeScatterArray()` is a non-variadic alternative that is often more convenient for library callers and is 4906f3c3dcfSJed Brown accessible from Fortran. 4916f3c3dcfSJed Brown 492dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 493db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 494db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 495db781477SPatrick Sanan `DMCompositeScatterArray()` 49647c6ae99SBarry Smith @*/ 497d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatter(DM dm, Vec gvec, ...) 498d71ae5a4SJacob Faibussowitsch { 49947c6ae99SBarry Smith va_list Argp; 50047c6ae99SBarry Smith struct DMCompositeLink *next; 501c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 50247c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 50371b14b3eSStefano Zampini PetscBool flg; 50447c6ae99SBarry Smith 50547c6ae99SBarry Smith PetscFunctionBegin; 50647c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 50747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5097a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 51048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 51147c6ae99SBarry Smith 51215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 51347c6ae99SBarry Smith va_start(Argp, gvec); 5148fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 5159ae5db72SJed Brown Vec local; 5169ae5db72SJed Brown local = va_arg(Argp, Vec); 5179ae5db72SJed Brown if (local) { 5189ae5db72SJed Brown Vec global; 5195edff71fSBarry Smith const PetscScalar *array; 52063a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 5219566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5229566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5239566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 5249566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, local)); 5259566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, local)); 5269566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5279566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5289566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 52947c6ae99SBarry Smith } 53047c6ae99SBarry Smith } 53147c6ae99SBarry Smith va_end(Argp); 5323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 53347c6ae99SBarry Smith } 53447c6ae99SBarry Smith 5356f3c3dcfSJed Brown /*@ 5366f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 5376f3c3dcfSJed Brown 53820f4b53cSBarry Smith Collective 5396f3c3dcfSJed Brown 5406f3c3dcfSJed Brown Input Parameters: 541dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 5426f3c3dcfSJed Brown . gvec - the global vector 543a2b725a8SWilliam Gropp - lvecs - array of local vectors, NULL for any that are not needed 5446f3c3dcfSJed Brown 5456f3c3dcfSJed Brown Level: advanced 5466f3c3dcfSJed Brown 5476f3c3dcfSJed Brown Note: 548dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeScatter()` 5496f3c3dcfSJed Brown 550dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()` 551db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 552db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 5536f3c3dcfSJed Brown @*/ 554d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatterArray(DM dm, Vec gvec, Vec *lvecs) 555d71ae5a4SJacob Faibussowitsch { 5566f3c3dcfSJed Brown struct DMCompositeLink *next; 5576f3c3dcfSJed Brown PetscInt i; 5586f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 55971b14b3eSStefano Zampini PetscBool flg; 5606f3c3dcfSJed Brown 5616f3c3dcfSJed Brown PetscFunctionBegin; 5626f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 5636f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5649566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5657a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 56648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 5676f3c3dcfSJed Brown 56815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 5696f3c3dcfSJed Brown for (i = 0, next = com->next; next; next = next->next, i++) { 5706f3c3dcfSJed Brown if (lvecs[i]) { 5716f3c3dcfSJed Brown Vec global; 572c5d31e75SLisandro Dalcin const PetscScalar *array; 5736f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 3); 5749566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5759566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5769566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, (PetscScalar *)array + next->rstart)); 5779566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, lvecs[i])); 5789566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, lvecs[i])); 5799566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5809566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5819566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 5826f3c3dcfSJed Brown } 5836f3c3dcfSJed Brown } 5843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5856f3c3dcfSJed Brown } 5866f3c3dcfSJed Brown 58747c6ae99SBarry Smith /*@C 58847c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 58947c6ae99SBarry Smith 59020f4b53cSBarry Smith Collective 59147c6ae99SBarry Smith 592d8d19677SJose E. Roman Input Parameters: 593dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 594dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 595a4e35b19SJacob Faibussowitsch . gvec - the global vector 596a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for any that are not needed 59747c6ae99SBarry Smith 59847c6ae99SBarry Smith Level: advanced 59947c6ae99SBarry Smith 60060225df5SJacob Faibussowitsch Fortran Notes: 601dce8aebaSBarry Smith Fortran users should use `DMCompositeGatherArray()` 602f5f57ec0SBarry Smith 603dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 604db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 605db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 60647c6ae99SBarry Smith @*/ 607d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGather(DM dm, InsertMode imode, Vec gvec, ...) 608d71ae5a4SJacob Faibussowitsch { 60947c6ae99SBarry Smith va_list Argp; 61047c6ae99SBarry Smith struct DMCompositeLink *next; 61147c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 612c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 61371b14b3eSStefano Zampini PetscBool flg; 61447c6ae99SBarry Smith 61547c6ae99SBarry Smith PetscFunctionBegin; 61647c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 617064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6197a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 62048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 62147c6ae99SBarry Smith 62215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6231dac896bSSatish Balay va_start(Argp, gvec); 6248fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 6259ae5db72SJed Brown Vec local; 6269ae5db72SJed Brown local = va_arg(Argp, Vec); 6279ae5db72SJed Brown if (local) { 62847c6ae99SBarry Smith PetscScalar *array; 6299ae5db72SJed Brown Vec global; 63063a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 6319566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6329566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6339566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6349566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, imode, global)); 6359566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, imode, global)); 6369566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6379566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6389566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 63947c6ae99SBarry Smith } 64047c6ae99SBarry Smith } 64147c6ae99SBarry Smith va_end(Argp); 6423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 64347c6ae99SBarry Smith } 64447c6ae99SBarry Smith 6456f3c3dcfSJed Brown /*@ 6466f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 6476f3c3dcfSJed Brown 64820f4b53cSBarry Smith Collective 6496f3c3dcfSJed Brown 650d8d19677SJose E. Roman Input Parameters: 651dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 6526f3c3dcfSJed Brown . gvec - the global vector 653dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 6546f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 6556f3c3dcfSJed Brown 6566f3c3dcfSJed Brown Level: advanced 6576f3c3dcfSJed Brown 658dce8aebaSBarry Smith Note: 659dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeGather()`. 6606f3c3dcfSJed Brown 661dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 662db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 663db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()`, 6646f3c3dcfSJed Brown @*/ 665d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGatherArray(DM dm, InsertMode imode, Vec gvec, Vec *lvecs) 666d71ae5a4SJacob Faibussowitsch { 6676f3c3dcfSJed Brown struct DMCompositeLink *next; 6686f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 6696f3c3dcfSJed Brown PetscInt i; 67071b14b3eSStefano Zampini PetscBool flg; 6716f3c3dcfSJed Brown 6726f3c3dcfSJed Brown PetscFunctionBegin; 6736f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 674064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6759566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6767a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 67748a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 6786f3c3dcfSJed Brown 67915229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6806f3c3dcfSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) { 6816f3c3dcfSJed Brown if (lvecs[i]) { 6826f3c3dcfSJed Brown PetscScalar *array; 6836f3c3dcfSJed Brown Vec global; 684064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 4); 6859566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6869566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6879566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6889566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, lvecs[i], imode, global)); 6899566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, lvecs[i], imode, global)); 6909566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6919566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6929566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 6936f3c3dcfSJed Brown } 6946f3c3dcfSJed Brown } 6953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6966f3c3dcfSJed Brown } 6976f3c3dcfSJed Brown 698f5f57ec0SBarry Smith /*@ 699dce8aebaSBarry Smith DMCompositeAddDM - adds a `DM` vector to a `DMCOMPOSITE` 70047c6ae99SBarry Smith 70120f4b53cSBarry Smith Collective 70247c6ae99SBarry Smith 703d8d19677SJose E. Roman Input Parameters: 704dce8aebaSBarry Smith + dmc - the `DMCOMPOSITE` object 705dce8aebaSBarry Smith - dm - the `DM` object 70647c6ae99SBarry Smith 70747c6ae99SBarry Smith Level: advanced 70847c6ae99SBarry Smith 70942747ad1SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeGather()`, `DMCreateGlobalVector()`, 710db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 711db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 71247c6ae99SBarry Smith @*/ 713d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeAddDM(DM dmc, DM dm) 714d71ae5a4SJacob Faibussowitsch { 71506ebdd98SJed Brown PetscInt n, nlocal; 71647c6ae99SBarry Smith struct DMCompositeLink *mine, *next; 71706ebdd98SJed Brown Vec global, local; 71847c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmc->data; 71971b14b3eSStefano Zampini PetscBool flg; 72047c6ae99SBarry Smith 72147c6ae99SBarry Smith PetscFunctionBegin; 72247c6ae99SBarry Smith PetscValidHeaderSpecific(dmc, DM_CLASSID, 1); 72347c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 2); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dmc, DMCOMPOSITE, &flg)); 7257a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 72647c6ae99SBarry Smith next = com->next; 72728b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dmc), PETSC_ERR_ARG_WRONGSTATE, "Cannot add a DM once you have used the DMComposite"); 72847c6ae99SBarry Smith 72947c6ae99SBarry Smith /* create new link */ 7309566063dSJacob Faibussowitsch PetscCall(PetscNew(&mine)); 7319566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 732cac35740SJunchao Zhang PetscCall(DMCreateGlobalVector(dm, &global)); // Not using DMGetGlobalVector() since it will stash the vector with a type decided by dm, 733cac35740SJunchao Zhang PetscCall(VecGetLocalSize(global, &n)); // while we may want to set dmc's vectype later, say via DMSetFromOptions(dmc), and we 734cac35740SJunchao Zhang PetscCall(VecDestroy(&global)); // want to propagate the type to dm. 735cac35740SJunchao Zhang PetscCall(DMCreateLocalVector(dm, &local)); // Not using DMGetLocalVector(), same reason as above. 7369566063dSJacob Faibussowitsch PetscCall(VecGetSize(local, &nlocal)); 737cac35740SJunchao Zhang PetscCall(VecDestroy(&local)); 7388865f1eaSKarl Rupp 73947c6ae99SBarry Smith mine->n = n; 74006ebdd98SJed Brown mine->nlocal = nlocal; 74147c6ae99SBarry Smith mine->dm = dm; 7420298fd71SBarry Smith mine->next = NULL; 74347c6ae99SBarry Smith com->n += n; 7447ac2b803SAlex Fikl com->nghost += nlocal; 74547c6ae99SBarry Smith 74647c6ae99SBarry Smith /* add to end of list */ 7478865f1eaSKarl Rupp if (!next) com->next = mine; 7488865f1eaSKarl Rupp else { 74947c6ae99SBarry Smith while (next->next) next = next->next; 75047c6ae99SBarry Smith next->next = mine; 75147c6ae99SBarry Smith } 75247c6ae99SBarry Smith com->nDM++; 75347c6ae99SBarry Smith com->nmine++; 7543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 75547c6ae99SBarry Smith } 75647c6ae99SBarry Smith 7579804daf3SBarry Smith #include <petscdraw.h> 758d6acfc2dSPierre Jolivet PETSC_SINGLE_LIBRARY_INTERN PetscErrorCode VecView_MPI(Vec, PetscViewer); 759d6acfc2dSPierre Jolivet 76066976f2fSJacob Faibussowitsch static PetscErrorCode VecView_DMComposite(Vec gvec, PetscViewer viewer) 761d71ae5a4SJacob Faibussowitsch { 76247c6ae99SBarry Smith DM dm; 76347c6ae99SBarry Smith struct DMCompositeLink *next; 76447c6ae99SBarry Smith PetscBool isdraw; 765cef07954SSatish Balay DM_Composite *com; 76647c6ae99SBarry Smith 76747c6ae99SBarry Smith PetscFunctionBegin; 7689566063dSJacob Faibussowitsch PetscCall(VecGetDM(gvec, &dm)); 7697a8be351SBarry Smith PetscCheck(dm, PetscObjectComm((PetscObject)gvec), PETSC_ERR_ARG_WRONG, "Vector not generated from a DMComposite"); 77047c6ae99SBarry Smith com = (DM_Composite *)dm->data; 77147c6ae99SBarry Smith next = com->next; 77247c6ae99SBarry Smith 7739566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 77447c6ae99SBarry Smith if (!isdraw) { 77547c6ae99SBarry Smith /* do I really want to call this? */ 7769566063dSJacob Faibussowitsch PetscCall(VecView_MPI(gvec, viewer)); 77747c6ae99SBarry Smith } else { 77847c6ae99SBarry Smith PetscInt cnt = 0; 77947c6ae99SBarry Smith 78015229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 78147c6ae99SBarry Smith while (next) { 78247c6ae99SBarry Smith Vec vec; 783ca4278abSLisandro Dalcin const PetscScalar *array; 78447c6ae99SBarry Smith PetscInt bs; 78547c6ae99SBarry Smith 7869ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 7879566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &vec)); 7889566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 7899566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(vec, (PetscScalar *)array + next->rstart)); 7909566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 7919566063dSJacob Faibussowitsch PetscCall(VecView(vec, viewer)); 7929566063dSJacob Faibussowitsch PetscCall(VecResetArray(vec)); 7939566063dSJacob Faibussowitsch PetscCall(VecGetBlockSize(vec, &bs)); 7949566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &vec)); 7959566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, bs)); 79647c6ae99SBarry Smith cnt += bs; 79747c6ae99SBarry Smith next = next->next; 79847c6ae99SBarry Smith } 7999566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, -cnt)); 80047c6ae99SBarry Smith } 8013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 80247c6ae99SBarry Smith } 80347c6ae99SBarry Smith 80466976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateGlobalVector_Composite(DM dm, Vec *gvec) 805d71ae5a4SJacob Faibussowitsch { 80647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 80747c6ae99SBarry Smith 80847c6ae99SBarry Smith PetscFunctionBegin; 80947c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8109566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8119566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8129566063dSJacob Faibussowitsch PetscCall(VecCreate(PetscObjectComm((PetscObject)dm), gvec)); 8139566063dSJacob Faibussowitsch PetscCall(VecSetType(*gvec, dm->vectype)); 8149566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*gvec, com->n, com->N)); 8159566063dSJacob Faibussowitsch PetscCall(VecSetDM(*gvec, dm)); 816*57d50842SBarry Smith PetscCall(VecSetOperation(*gvec, VECOP_VIEW, (PetscErrorCodeFn *)VecView_DMComposite)); 8173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 81847c6ae99SBarry Smith } 81947c6ae99SBarry Smith 82066976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateLocalVector_Composite(DM dm, Vec *lvec) 821d71ae5a4SJacob Faibussowitsch { 82247c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 82347c6ae99SBarry Smith 82447c6ae99SBarry Smith PetscFunctionBegin; 82547c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 82647c6ae99SBarry Smith if (!com->setup) { 8279566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8289566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 82947c6ae99SBarry Smith } 8309566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, lvec)); 8319566063dSJacob Faibussowitsch PetscCall(VecSetType(*lvec, dm->vectype)); 8329566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*lvec, com->nghost, PETSC_DECIDE)); 8339566063dSJacob Faibussowitsch PetscCall(VecSetDM(*lvec, dm)); 8343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 83547c6ae99SBarry Smith } 83647c6ae99SBarry Smith 83747c6ae99SBarry Smith /*@C 838dce8aebaSBarry Smith DMCompositeGetISLocalToGlobalMappings - gets an `ISLocalToGlobalMapping` for each `DM` in the `DMCOMPOSITE`, maps to the composite global space 83947c6ae99SBarry Smith 84020f4b53cSBarry Smith Collective; No Fortran Support 84147c6ae99SBarry Smith 84247c6ae99SBarry Smith Input Parameter: 843dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 84447c6ae99SBarry Smith 8452fe279fdSBarry Smith Output Parameter: 8469ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 847dce8aebaSBarry Smith all the ghost points that individual ghosted `DMDA` may have. 84847c6ae99SBarry Smith 84947c6ae99SBarry Smith Level: advanced 85047c6ae99SBarry Smith 851dce8aebaSBarry Smith Note: 852f13dfd9eSBarry Smith Each entry of `ltogs` should be destroyed with `ISLocalToGlobalMappingDestroy()`, `ltogs` should be freed with `PetscFree()`. 85347c6ae99SBarry Smith 854dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 855db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 856c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 85747c6ae99SBarry Smith @*/ 858cc4c1da9SBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm, ISLocalToGlobalMapping *ltogs[]) 859d71ae5a4SJacob Faibussowitsch { 86047c6ae99SBarry Smith PetscInt i, *idx, n, cnt; 86147c6ae99SBarry Smith struct DMCompositeLink *next; 86247c6ae99SBarry Smith PetscMPIInt rank; 86347c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 86471b14b3eSStefano Zampini PetscBool flg; 86547c6ae99SBarry Smith 86647c6ae99SBarry Smith PetscFunctionBegin; 86747c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8689566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 8697a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 8709566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8719566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, ltogs)); 87247c6ae99SBarry Smith next = com->next; 8739566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 87447c6ae99SBarry Smith 87515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 87647c6ae99SBarry Smith cnt = 0; 87747c6ae99SBarry Smith while (next) { 8786eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8796eb61c8cSJed Brown PetscMPIInt size; 88086994e45SJed Brown const PetscInt *suboff, *indices; 8816eb61c8cSJed Brown Vec global; 88247c6ae99SBarry Smith 8836eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8849566063dSJacob Faibussowitsch PetscCall(DMGetLocalToGlobalMapping(next->dm, <og)); 8859566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltog, &n)); 8869566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltog, &indices)); 8879566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &idx)); 88847c6ae99SBarry Smith 8896eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8909566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 8919566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRanges(global, &suboff)); 8929566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)global), &size)); 8936eb61c8cSJed Brown 8946eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 8956eb61c8cSJed Brown for (i = 0; i < n; i++) { 89686994e45SJed Brown PetscInt subi = indices[i], lo = 0, hi = size, t; 897e333b035SStefano Zampini /* There's no consensus on what a negative index means, 898e333b035SStefano Zampini except for skipping when setting the values in vectors and matrices */ 8999371c9d4SSatish Balay if (subi < 0) { 9009371c9d4SSatish Balay idx[i] = subi - next->grstarts[rank]; 9019371c9d4SSatish Balay continue; 9029371c9d4SSatish Balay } 9036eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 9046eb61c8cSJed Brown while (hi - lo > 1) { 9056eb61c8cSJed Brown t = lo + (hi - lo) / 2; 9066eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 9076eb61c8cSJed Brown else lo = t; 9086eb61c8cSJed Brown } 9096eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 9106eb61c8cSJed Brown } 9119566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltog, &indices)); 9129566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm), 1, n, idx, PETSC_OWN_POINTER, &(*ltogs)[cnt])); 9139566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 91447c6ae99SBarry Smith next = next->next; 91547c6ae99SBarry Smith cnt++; 91647c6ae99SBarry Smith } 9173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 91847c6ae99SBarry Smith } 91947c6ae99SBarry Smith 92087c85e80SJed Brown /*@C 9219ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 92287c85e80SJed Brown 92320f4b53cSBarry Smith Not Collective; No Fortran Support 92487c85e80SJed Brown 9254165533cSJose E. Roman Input Parameter: 926dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` 92787c85e80SJed Brown 9284165533cSJose E. Roman Output Parameter: 92915229ffcSPierre Jolivet . is - array of serial index sets for each component of the `DMCOMPOSITE` 93087c85e80SJed Brown 93187c85e80SJed Brown Level: intermediate 93287c85e80SJed Brown 93387c85e80SJed Brown Notes: 93487c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 93515229ffcSPierre Jolivet `MatGetLocalSubMatrix()`. In the future, the scatters for each entry in the `DMCOMPOSITE` may be merged into a single 9369ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 93787c85e80SJed Brown 938dce8aebaSBarry Smith To get the composite global indices at all local points (including ghosts), use `DMCompositeGetISLocalToGlobalMappings()`. 93987c85e80SJed Brown 940dce8aebaSBarry Smith To get index sets for pieces of the composite global vector, use `DMCompositeGetGlobalISs()`. 94187c85e80SJed Brown 942dce8aebaSBarry Smith Each returned `IS` should be destroyed with `ISDestroy()`, the array should be freed with `PetscFree()`. 94387c85e80SJed Brown 944f13dfd9eSBarry Smith Fortran Note: 945ce78bad3SBarry Smith Use `DMCompositeRestoreLocalISs()` to release the `is`. 946f13dfd9eSBarry Smith 947f13dfd9eSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetGlobalISs()`, `DMCompositeGetISLocalToGlobalMappings()`, `MatGetLocalSubMatrix()`, 948f13dfd9eSBarry Smith `MatCreateLocalRef()`, `DMCompositeGetNumberDM()` 94987c85e80SJed Brown @*/ 950cc4c1da9SBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm, IS *is[]) 951d71ae5a4SJacob Faibussowitsch { 95287c85e80SJed Brown DM_Composite *com = (DM_Composite *)dm->data; 95387c85e80SJed Brown struct DMCompositeLink *link; 95487c85e80SJed Brown PetscInt cnt, start; 95571b14b3eSStefano Zampini PetscBool flg; 95687c85e80SJed Brown 95787c85e80SJed Brown PetscFunctionBegin; 95887c85e80SJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 9594f572ea9SToby Isaac PetscAssertPointer(is, 2); 9609566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 9617a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 9629566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nmine, is)); 96306ebdd98SJed Brown for (cnt = 0, start = 0, link = com->next; link; start += link->nlocal, cnt++, link = link->next) { 964520db06cSJed Brown PetscInt bs; 9659566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, link->nlocal, start, 1, &(*is)[cnt])); 9669566063dSJacob Faibussowitsch PetscCall(DMGetBlockSize(link->dm, &bs)); 9679566063dSJacob Faibussowitsch PetscCall(ISSetBlockSize((*is)[cnt], bs)); 968520db06cSJed Brown } 9693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 97087c85e80SJed Brown } 97187c85e80SJed Brown 97247c6ae99SBarry Smith /*@C 973dce8aebaSBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object in a `DMCOMPOSITE` 97447c6ae99SBarry Smith 97520f4b53cSBarry Smith Collective 97647c6ae99SBarry Smith 97747c6ae99SBarry Smith Input Parameter: 978dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 97947c6ae99SBarry Smith 9802fe279fdSBarry Smith Output Parameter: 98147c6ae99SBarry Smith . is - the array of index sets 98247c6ae99SBarry Smith 98347c6ae99SBarry Smith Level: advanced 98447c6ae99SBarry Smith 98547c6ae99SBarry Smith Notes: 986f13dfd9eSBarry Smith The `is` entries should be destroyed with `ISDestroy()`, `is` should be freed with `PetscFree()` 98747c6ae99SBarry Smith 98847c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 98947c6ae99SBarry Smith 990dce8aebaSBarry Smith Use `DMCompositeGetLocalISs()` for index sets in the packed local numbering, and 991dce8aebaSBarry Smith `DMCompositeGetISLocalToGlobalMappings()` for to map local sub-`DM` (including ghost) indices to packed global 9926eb61c8cSJed Brown indices. 99347c6ae99SBarry Smith 994ce78bad3SBarry Smith Fortran Note: 995ce78bad3SBarry Smith Use `DMCompositeRestoreGlobalISs()` to release the `is`. 996f3cb0f7eSJed Brown 997dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 998db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 999c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 100047c6ae99SBarry Smith @*/ 1001d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetGlobalISs(DM dm, IS *is[]) 1002d71ae5a4SJacob Faibussowitsch { 100366bb578eSMark Adams PetscInt cnt = 0; 100447c6ae99SBarry Smith struct DMCompositeLink *next; 100547c6ae99SBarry Smith PetscMPIInt rank; 100647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 100771b14b3eSStefano Zampini PetscBool flg; 100847c6ae99SBarry Smith 100947c6ae99SBarry Smith PetscFunctionBegin; 101047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 10119566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 10127a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 10137a8be351SBarry Smith PetscCheck(dm->setupcalled, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Must call DMSetUp() before"); 10149566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, is)); 101547c6ae99SBarry Smith next = com->next; 10169566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 101747c6ae99SBarry Smith 101815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 101947c6ae99SBarry Smith while (next) { 1020e5e52638SMatthew G. Knepley PetscDS prob; 1021e5e52638SMatthew G. Knepley 10229566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PetscObjectComm((PetscObject)dm), next->n, next->grstart, 1, &(*is)[cnt])); 10239566063dSJacob Faibussowitsch PetscCall(DMGetDS(dm, &prob)); 1024e5e52638SMatthew G. Knepley if (prob) { 102565c226d8SMatthew G. Knepley MatNullSpace space; 102665c226d8SMatthew G. Knepley Mat pmat; 10270f21e855SMatthew G. Knepley PetscObject disc; 10280f21e855SMatthew G. Knepley PetscInt Nf; 102965c226d8SMatthew G. Knepley 10309566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(prob, &Nf)); 1031f24dd8d2SMatthew G. Knepley if (cnt < Nf) { 10329566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, cnt, &disc)); 10339566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nullspace", (PetscObject *)&space)); 10349566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nullspace", (PetscObject)space)); 10359566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nearnullspace", (PetscObject *)&space)); 10369566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nearnullspace", (PetscObject)space)); 10379566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "pmat", (PetscObject *)&pmat)); 10389566063dSJacob Faibussowitsch if (pmat) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "pmat", (PetscObject)pmat)); 103965c226d8SMatthew G. Knepley } 1040f24dd8d2SMatthew G. Knepley } 104147c6ae99SBarry Smith cnt++; 104247c6ae99SBarry Smith next = next->next; 104347c6ae99SBarry Smith } 10443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 104547c6ae99SBarry Smith } 104647c6ae99SBarry Smith 104766976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields, char ***fieldNames, IS **fields) 1048d71ae5a4SJacob Faibussowitsch { 10494d343eeaSMatthew G Knepley PetscInt nDM; 10504d343eeaSMatthew G Knepley DM *dms; 10514d343eeaSMatthew G Knepley PetscInt i; 10524d343eeaSMatthew G Knepley 10534d343eeaSMatthew G Knepley PetscFunctionBegin; 10549566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 10558865f1eaSKarl Rupp if (numFields) *numFields = nDM; 10569566063dSJacob Faibussowitsch PetscCall(DMCompositeGetGlobalISs(dm, fields)); 10574d343eeaSMatthew G Knepley if (fieldNames) { 10589566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, &dms)); 10599566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, fieldNames)); 10609566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 10614d343eeaSMatthew G Knepley for (i = 0; i < nDM; i++) { 10624d343eeaSMatthew G Knepley char buf[256]; 10634d343eeaSMatthew G Knepley const char *splitname; 10644d343eeaSMatthew G Knepley 10654d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 10664d343eeaSMatthew G Knepley splitname = ((PetscObject)dm)->name; 10674d343eeaSMatthew G Knepley if (!splitname) { 10689566063dSJacob Faibussowitsch PetscCall(PetscObjectGetOptionsPrefix((PetscObject)dms[i], &splitname)); 10694d343eeaSMatthew G Knepley if (splitname) { 10704d343eeaSMatthew G Knepley size_t len; 10719566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(buf, splitname, sizeof(buf))); 10728caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 10739566063dSJacob Faibussowitsch PetscCall(PetscStrlen(buf, &len)); 10744d343eeaSMatthew G Knepley if (buf[len - 1] == '_') buf[len - 1] = 0; /* Remove trailing underscore if it was used */ 10754d343eeaSMatthew G Knepley splitname = buf; 10764d343eeaSMatthew G Knepley } 10774d343eeaSMatthew G Knepley } 10784d343eeaSMatthew G Knepley if (!splitname) { 107963a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(buf, sizeof(buf), "%" PetscInt_FMT, i)); 10804d343eeaSMatthew G Knepley splitname = buf; 10814d343eeaSMatthew G Knepley } 10829566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(splitname, &(*fieldNames)[i])); 10834d343eeaSMatthew G Knepley } 10849566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 10854d343eeaSMatthew G Knepley } 10863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10874d343eeaSMatthew G Knepley } 10884d343eeaSMatthew G Knepley 1089e7c4fc90SDmitry Karpeev /* 1090e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 10910298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 1092e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 1093e7c4fc90SDmitry Karpeev */ 109466976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len, char ***namelist, IS **islist, DM **dmlist) 1095d71ae5a4SJacob Faibussowitsch { 1096e7c4fc90SDmitry Karpeev PetscInt nDM; 1097e7c4fc90SDmitry Karpeev PetscInt i; 1098e7c4fc90SDmitry Karpeev 1099e7c4fc90SDmitry Karpeev PetscFunctionBegin; 11009566063dSJacob Faibussowitsch PetscCall(DMCreateFieldIS_Composite(dm, len, namelist, islist)); 1101e7c4fc90SDmitry Karpeev if (dmlist) { 11029566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 11039566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, dmlist)); 11049566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, *dmlist)); 110548a46eb9SPierre Jolivet for (i = 0; i < nDM; i++) PetscCall(PetscObjectReference((PetscObject)((*dmlist)[i]))); 1106e7c4fc90SDmitry Karpeev } 11073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1108e7c4fc90SDmitry Karpeev } 1109e7c4fc90SDmitry Karpeev 111047c6ae99SBarry Smith /*@C 1111dce8aebaSBarry Smith DMCompositeGetLocalVectors - Gets local vectors for each part of a `DMCOMPOSITE` 1112dce8aebaSBarry Smith Use `DMCompositeRestoreLocalVectors()` to return them. 111347c6ae99SBarry Smith 111420f4b53cSBarry Smith Not Collective; No Fortran Support 111547c6ae99SBarry Smith 111647c6ae99SBarry Smith Input Parameter: 1117dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 111847c6ae99SBarry Smith 111947c6ae99SBarry Smith Output Parameter: 1120a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec`s 112147c6ae99SBarry Smith 112247c6ae99SBarry Smith Level: advanced 112347c6ae99SBarry Smith 1124dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1125db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1126db781477SPatrick Sanan `DMCompositeRestoreLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 112747c6ae99SBarry Smith @*/ 1128d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetLocalVectors(DM dm, ...) 1129d71ae5a4SJacob Faibussowitsch { 113047c6ae99SBarry Smith va_list Argp; 113147c6ae99SBarry Smith struct DMCompositeLink *next; 113247c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 113371b14b3eSStefano Zampini PetscBool flg; 113447c6ae99SBarry Smith 113547c6ae99SBarry Smith PetscFunctionBegin; 113647c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11379566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11387a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 113947c6ae99SBarry Smith next = com->next; 114015229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 114147c6ae99SBarry Smith va_start(Argp, dm); 114247c6ae99SBarry Smith while (next) { 114347c6ae99SBarry Smith Vec *vec; 114447c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11459566063dSJacob Faibussowitsch if (vec) PetscCall(DMGetLocalVector(next->dm, vec)); 114647c6ae99SBarry Smith next = next->next; 114747c6ae99SBarry Smith } 114847c6ae99SBarry Smith va_end(Argp); 11493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 115047c6ae99SBarry Smith } 115147c6ae99SBarry Smith 115247c6ae99SBarry Smith /*@C 1153dce8aebaSBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors for each part of a `DMCOMPOSITE` 115447c6ae99SBarry Smith 115520f4b53cSBarry Smith Not Collective; No Fortran Support 115647c6ae99SBarry Smith 115747c6ae99SBarry Smith Input Parameter: 1158dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 115947c6ae99SBarry Smith 116047c6ae99SBarry Smith Output Parameter: 1161a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec` 116247c6ae99SBarry Smith 116347c6ae99SBarry Smith Level: advanced 116447c6ae99SBarry Smith 1165dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1166db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1167db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 116847c6ae99SBarry Smith @*/ 1169d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreLocalVectors(DM dm, ...) 1170d71ae5a4SJacob Faibussowitsch { 117147c6ae99SBarry Smith va_list Argp; 117247c6ae99SBarry Smith struct DMCompositeLink *next; 117347c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 117471b14b3eSStefano Zampini PetscBool flg; 117547c6ae99SBarry Smith 117647c6ae99SBarry Smith PetscFunctionBegin; 117747c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11789566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11797a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 118047c6ae99SBarry Smith next = com->next; 118115229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 118247c6ae99SBarry Smith va_start(Argp, dm); 118347c6ae99SBarry Smith while (next) { 118447c6ae99SBarry Smith Vec *vec; 118547c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11869566063dSJacob Faibussowitsch if (vec) PetscCall(DMRestoreLocalVector(next->dm, vec)); 118747c6ae99SBarry Smith next = next->next; 118847c6ae99SBarry Smith } 118947c6ae99SBarry Smith va_end(Argp); 11903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 119147c6ae99SBarry Smith } 119247c6ae99SBarry Smith 119347c6ae99SBarry Smith /*@C 1194dce8aebaSBarry Smith DMCompositeGetEntries - Gets the `DM` for each entry in a `DMCOMPOSITE`. 119547c6ae99SBarry Smith 119647c6ae99SBarry Smith Not Collective 119747c6ae99SBarry Smith 119847c6ae99SBarry Smith Input Parameter: 1199dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 120047c6ae99SBarry Smith 120147c6ae99SBarry Smith Output Parameter: 1202a4e35b19SJacob Faibussowitsch . ... - the individual entries `DM` 120347c6ae99SBarry Smith 120447c6ae99SBarry Smith Level: advanced 120547c6ae99SBarry Smith 120660225df5SJacob Faibussowitsch Fortran Notes: 12075d83a8b1SBarry Smith Use `DMCompositeGetEntriesArray()` 1208f5f57ec0SBarry Smith 1209dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntriesArray()` 1210db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 121160225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 121247c6ae99SBarry Smith @*/ 1213d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntries(DM dm, ...) 1214d71ae5a4SJacob Faibussowitsch { 121547c6ae99SBarry Smith va_list Argp; 121647c6ae99SBarry Smith struct DMCompositeLink *next; 121747c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 121871b14b3eSStefano Zampini PetscBool flg; 121947c6ae99SBarry Smith 122047c6ae99SBarry Smith PetscFunctionBegin; 122147c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12229566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12237a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 122447c6ae99SBarry Smith next = com->next; 122515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 122647c6ae99SBarry Smith va_start(Argp, dm); 122747c6ae99SBarry Smith while (next) { 122847c6ae99SBarry Smith DM *dmn; 122947c6ae99SBarry Smith dmn = va_arg(Argp, DM *); 12309ae5db72SJed Brown if (dmn) *dmn = next->dm; 123147c6ae99SBarry Smith next = next->next; 123247c6ae99SBarry Smith } 123347c6ae99SBarry Smith va_end(Argp); 12343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 123547c6ae99SBarry Smith } 123647c6ae99SBarry Smith 1237cc4c1da9SBarry Smith /*@ 1238dce8aebaSBarry Smith DMCompositeGetEntriesArray - Gets the DM for each entry in a `DMCOMPOSITE` 12392fa5ba8aSJed Brown 12402fa5ba8aSJed Brown Not Collective 12412fa5ba8aSJed Brown 12422fa5ba8aSJed Brown Input Parameter: 1243dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 1244907376e6SBarry Smith 1245907376e6SBarry Smith Output Parameter: 1246dce8aebaSBarry Smith . dms - array of sufficient length (see `DMCompositeGetNumberDM()`) to hold the individual `DM` 12472fa5ba8aSJed Brown 12482fa5ba8aSJed Brown Level: advanced 12492fa5ba8aSJed Brown 1250dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntries()` 1251db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 125260225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 12532fa5ba8aSJed Brown @*/ 1254d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntriesArray(DM dm, DM dms[]) 1255d71ae5a4SJacob Faibussowitsch { 12562fa5ba8aSJed Brown struct DMCompositeLink *next; 12572fa5ba8aSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 12582fa5ba8aSJed Brown PetscInt i; 125971b14b3eSStefano Zampini PetscBool flg; 12602fa5ba8aSJed Brown 12612fa5ba8aSJed Brown PetscFunctionBegin; 12622fa5ba8aSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12639566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12647a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 126515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 12662fa5ba8aSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) dms[i] = next->dm; 12673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12682fa5ba8aSJed Brown } 12692fa5ba8aSJed Brown 1270e10fd815SStefano Zampini typedef struct { 1271e10fd815SStefano Zampini DM dm; 1272e10fd815SStefano Zampini PetscViewer *subv; 1273e10fd815SStefano Zampini Vec *vecs; 1274e10fd815SStefano Zampini } GLVisViewerCtx; 1275e10fd815SStefano Zampini 1276d71ae5a4SJacob Faibussowitsch static PetscErrorCode DestroyGLVisViewerCtx_Private(void *vctx) 1277d71ae5a4SJacob Faibussowitsch { 1278e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1279e10fd815SStefano Zampini PetscInt i, n; 1280e10fd815SStefano Zampini 1281e10fd815SStefano Zampini PetscFunctionBegin; 12829566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 128348a46eb9SPierre Jolivet for (i = 0; i < n; i++) PetscCall(PetscViewerDestroy(&ctx->subv[i])); 12849566063dSJacob Faibussowitsch PetscCall(PetscFree2(ctx->subv, ctx->vecs)); 12859566063dSJacob Faibussowitsch PetscCall(DMDestroy(&ctx->dm)); 12869566063dSJacob Faibussowitsch PetscCall(PetscFree(ctx)); 12873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1288e10fd815SStefano Zampini } 1289e10fd815SStefano Zampini 1290d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCompositeSampleGLVisFields_Private(PetscObject oX, PetscInt nf, PetscObject oXfield[], void *vctx) 1291d71ae5a4SJacob Faibussowitsch { 1292e10fd815SStefano Zampini Vec X = (Vec)oX; 1293e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1294e10fd815SStefano Zampini PetscInt i, n, cumf; 1295e10fd815SStefano Zampini 1296e10fd815SStefano Zampini PetscFunctionBegin; 12979566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 12989566063dSJacob Faibussowitsch PetscCall(DMCompositeGetAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 1299e10fd815SStefano Zampini for (i = 0, cumf = 0; i < n; i++) { 1300e10fd815SStefano Zampini PetscErrorCode (*g2l)(PetscObject, PetscInt, PetscObject[], void *); 1301e10fd815SStefano Zampini void *fctx; 1302e10fd815SStefano Zampini PetscInt nfi; 1303e10fd815SStefano Zampini 130434e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nfi, NULL, NULL, &g2l, NULL, &fctx)); 1305e10fd815SStefano Zampini if (!nfi) continue; 13061baa6e33SBarry Smith if (g2l) PetscCall((*g2l)((PetscObject)ctx->vecs[i], nfi, oXfield + cumf, fctx)); 1307f4f49eeaSPierre Jolivet else PetscCall(VecCopy(ctx->vecs[i], (Vec)oXfield[cumf])); 1308e10fd815SStefano Zampini cumf += nfi; 1309e10fd815SStefano Zampini } 13109566063dSJacob Faibussowitsch PetscCall(DMCompositeRestoreAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 13113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1312e10fd815SStefano Zampini } 1313e10fd815SStefano Zampini 1314d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMSetUpGLVisViewer_Composite(PetscObject odm, PetscViewer viewer) 1315d71ae5a4SJacob Faibussowitsch { 1316e10fd815SStefano Zampini DM dm = (DM)odm, *dms; 1317e10fd815SStefano Zampini Vec *Ufds; 1318e10fd815SStefano Zampini GLVisViewerCtx *ctx; 1319e10fd815SStefano Zampini PetscInt i, n, tnf, *sdim; 1320e10fd815SStefano Zampini char **fecs; 1321e10fd815SStefano Zampini 1322e10fd815SStefano Zampini PetscFunctionBegin; 13239566063dSJacob Faibussowitsch PetscCall(PetscNew(&ctx)); 13249566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 1325e10fd815SStefano Zampini ctx->dm = dm; 13269566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &n)); 13279566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &dms)); 13289566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 13299566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n, &ctx->subv, n, &ctx->vecs)); 1330e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1331e10fd815SStefano Zampini PetscInt nf; 1332e10fd815SStefano Zampini 13339566063dSJacob Faibussowitsch PetscCall(PetscViewerCreate(PetscObjectComm(odm), &ctx->subv[i])); 13349566063dSJacob Faibussowitsch PetscCall(PetscViewerSetType(ctx->subv[i], PETSCVIEWERGLVIS)); 133534e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisSetDM_Internal(ctx->subv[i], (PetscObject)dms[i])); 133634e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, NULL, NULL, NULL, NULL, NULL)); 1337e10fd815SStefano Zampini tnf += nf; 1338e10fd815SStefano Zampini } 13399566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 13409566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(tnf, &fecs, tnf, &sdim, tnf, &Ufds)); 1341e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1342e10fd815SStefano Zampini PetscInt *sd, nf, f; 1343e10fd815SStefano Zampini const char **fec; 1344e10fd815SStefano Zampini Vec *Uf; 1345e10fd815SStefano Zampini 134634e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, &fec, &sd, NULL, (PetscObject **)&Uf, NULL)); 1347e10fd815SStefano Zampini for (f = 0; f < nf; f++) { 13489566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(fec[f], &fecs[tnf + f])); 1349e10fd815SStefano Zampini Ufds[tnf + f] = Uf[f]; 1350e10fd815SStefano Zampini sdim[tnf + f] = sd[f]; 1351e10fd815SStefano Zampini } 1352e10fd815SStefano Zampini tnf += nf; 1353e10fd815SStefano Zampini } 13549566063dSJacob Faibussowitsch PetscCall(PetscViewerGLVisSetFields(viewer, tnf, (const char **)fecs, sdim, DMCompositeSampleGLVisFields_Private, (PetscObject *)Ufds, ctx, DestroyGLVisViewerCtx_Private)); 135548a46eb9SPierre Jolivet for (i = 0; i < tnf; i++) PetscCall(PetscFree(fecs[i])); 13569566063dSJacob Faibussowitsch PetscCall(PetscFree3(fecs, sdim, Ufds)); 13573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1358e10fd815SStefano Zampini } 1359e10fd815SStefano Zampini 136066976f2fSJacob Faibussowitsch static PetscErrorCode DMRefine_Composite(DM dmi, MPI_Comm comm, DM *fine) 1361d71ae5a4SJacob Faibussowitsch { 136247c6ae99SBarry Smith struct DMCompositeLink *next; 136347c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmi->data; 136447c6ae99SBarry Smith DM dm; 136547c6ae99SBarry Smith 136647c6ae99SBarry Smith PetscFunctionBegin; 136747c6ae99SBarry Smith PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 136848a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 13699566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 137047c6ae99SBarry Smith next = com->next; 13719566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 137247c6ae99SBarry Smith 137315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 137447c6ae99SBarry Smith while (next) { 13759566063dSJacob Faibussowitsch PetscCall(DMRefine(next->dm, comm, &dm)); 13769566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 13779566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 137847c6ae99SBarry Smith next = next->next; 137947c6ae99SBarry Smith } 13803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138147c6ae99SBarry Smith } 138247c6ae99SBarry Smith 138366976f2fSJacob Faibussowitsch static PetscErrorCode DMCoarsen_Composite(DM dmi, MPI_Comm comm, DM *fine) 1384d71ae5a4SJacob Faibussowitsch { 138514354c39SJed Brown struct DMCompositeLink *next; 138614354c39SJed Brown DM_Composite *com = (DM_Composite *)dmi->data; 138714354c39SJed Brown DM dm; 138814354c39SJed Brown 138914354c39SJed Brown PetscFunctionBegin; 139014354c39SJed Brown PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 13919566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 139248a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 139314354c39SJed Brown next = com->next; 13949566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 139514354c39SJed Brown 139615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 139714354c39SJed Brown while (next) { 13989566063dSJacob Faibussowitsch PetscCall(DMCoarsen(next->dm, comm, &dm)); 13999566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 14009566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 140114354c39SJed Brown next = next->next; 140214354c39SJed Brown } 14033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 140414354c39SJed Brown } 140547c6ae99SBarry Smith 140666976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateInterpolation_Composite(DM coarse, DM fine, Mat *A, Vec *v) 1407d71ae5a4SJacob Faibussowitsch { 14089ae5db72SJed Brown PetscInt m, n, M, N, nDM, i; 140947c6ae99SBarry Smith struct DMCompositeLink *nextc; 141047c6ae99SBarry Smith struct DMCompositeLink *nextf; 141125296bd5SBarry Smith Vec gcoarse, gfine, *vecs; 141247c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite *)coarse->data; 141347c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite *)fine->data; 14149ae5db72SJed Brown Mat *mats; 141547c6ae99SBarry Smith 141647c6ae99SBarry Smith PetscFunctionBegin; 141747c6ae99SBarry Smith PetscValidHeaderSpecific(coarse, DM_CLASSID, 1); 141847c6ae99SBarry Smith PetscValidHeaderSpecific(fine, DM_CLASSID, 2); 14199566063dSJacob Faibussowitsch PetscCall(DMSetUp(coarse)); 14209566063dSJacob Faibussowitsch PetscCall(DMSetUp(fine)); 142147c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14229566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(coarse, &gcoarse)); 14239566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(fine, &gfine)); 14249566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gcoarse, &n)); 14259566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gfine, &m)); 14269566063dSJacob Faibussowitsch PetscCall(VecGetSize(gcoarse, &N)); 14279566063dSJacob Faibussowitsch PetscCall(VecGetSize(gfine, &M)); 14289566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(coarse, &gcoarse)); 14299566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(fine, &gfine)); 143047c6ae99SBarry Smith 14319ae5db72SJed Brown nDM = comfine->nDM; 143263a3b9bcSJacob Faibussowitsch PetscCheck(nDM == comcoarse->nDM, PetscObjectComm((PetscObject)fine), PETSC_ERR_ARG_INCOMP, "Fine DMComposite has %" PetscInt_FMT " entries, but coarse has %" PetscInt_FMT, nDM, comcoarse->nDM); 14339566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nDM * nDM, &mats)); 143448a46eb9SPierre Jolivet if (v) PetscCall(PetscCalloc1(nDM, &vecs)); 143547c6ae99SBarry Smith 143615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 14379ae5db72SJed Brown for (nextc = comcoarse->next, nextf = comfine->next, i = 0; nextc; nextc = nextc->next, nextf = nextf->next, i++) { 14381baa6e33SBarry Smith if (!v) PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], NULL)); 14391baa6e33SBarry Smith else PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], &vecs[i])); 144047c6ae99SBarry Smith } 14419566063dSJacob Faibussowitsch PetscCall(MatCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, nDM, NULL, mats, A)); 14421baa6e33SBarry Smith if (v) PetscCall(VecCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, vecs, v)); 14439566063dSJacob Faibussowitsch for (i = 0; i < nDM * nDM; i++) PetscCall(MatDestroy(&mats[i])); 14449566063dSJacob Faibussowitsch PetscCall(PetscFree(mats)); 144525296bd5SBarry Smith if (v) { 14469566063dSJacob Faibussowitsch for (i = 0; i < nDM; i++) PetscCall(VecDestroy(&vecs[i])); 14479566063dSJacob Faibussowitsch PetscCall(PetscFree(vecs)); 144825296bd5SBarry Smith } 14493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145047c6ae99SBarry Smith } 145147c6ae99SBarry Smith 1452d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 1453d71ae5a4SJacob Faibussowitsch { 14541411c6eeSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 14551411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1456f7efa3c7SJed Brown PetscInt i; 14571411c6eeSJed Brown 14581411c6eeSJed Brown PetscFunctionBegin; 14591411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 14609566063dSJacob Faibussowitsch PetscCall(DMCompositeGetISLocalToGlobalMappings(dm, <ogs)); 14619566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm), com->nDM, ltogs, &dm->ltogmap)); 14629566063dSJacob Faibussowitsch for (i = 0; i < com->nDM; i++) PetscCall(ISLocalToGlobalMappingDestroy(<ogs[i])); 14639566063dSJacob Faibussowitsch PetscCall(PetscFree(ltogs)); 14643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14651411c6eeSJed Brown } 14661411c6eeSJed Brown 146766976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateColoring_Composite(DM dm, ISColoringType ctype, ISColoring *coloring) 1468d71ae5a4SJacob Faibussowitsch { 146947c6ae99SBarry Smith PetscInt n, i, cnt; 147047c6ae99SBarry Smith ISColoringValue *colors; 147147c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 147247c6ae99SBarry Smith ISColoringValue maxcol = 0; 147347c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 147447c6ae99SBarry Smith 147547c6ae99SBarry Smith PetscFunctionBegin; 147647c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 147708401ef6SPierre Jolivet PetscCheck(ctype != IS_COLORING_LOCAL, PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "Only global coloring supported"); 1478966bd95aSPierre Jolivet PetscCheck(ctype == IS_COLORING_GLOBAL, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Unknown ISColoringType"); 147947c6ae99SBarry Smith n = com->n; 14809566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &colors)); /* freed in ISColoringDestroy() */ 148147c6ae99SBarry Smith 14829566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(((PetscObject)dm)->options, ((PetscObject)dm)->prefix, "-dmcomposite_dense_jacobian", &dense, NULL)); 148347c6ae99SBarry Smith if (dense) { 14846497c311SBarry Smith PetscCall(ISColoringValueCast(com->N, &maxcol)); 14856497c311SBarry Smith for (i = 0; i < n; i++) PetscCall(ISColoringValueCast(com->rstart + i, colors + i)); 148647c6ae99SBarry Smith } else { 148747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 148847c6ae99SBarry Smith PetscMPIInt rank; 148947c6ae99SBarry Smith 14909566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 149147c6ae99SBarry Smith cnt = 0; 149247c6ae99SBarry Smith while (next) { 149347c6ae99SBarry Smith ISColoring lcoloring; 149447c6ae99SBarry Smith 14959566063dSJacob Faibussowitsch PetscCall(DMCreateColoring(next->dm, IS_COLORING_GLOBAL, &lcoloring)); 14966497c311SBarry Smith for (i = 0; i < lcoloring->N; i++) PetscCall(ISColoringValueCast(maxcol + lcoloring->colors[i], colors + cnt++)); 149747c6ae99SBarry Smith maxcol += lcoloring->n; 14989566063dSJacob Faibussowitsch PetscCall(ISColoringDestroy(&lcoloring)); 149947c6ae99SBarry Smith next = next->next; 150047c6ae99SBarry Smith } 150147c6ae99SBarry Smith } 15029566063dSJacob Faibussowitsch PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)dm), maxcol, n, colors, PETSC_OWN_POINTER, coloring)); 15033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150447c6ae99SBarry Smith } 150547c6ae99SBarry Smith 150666976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1507d71ae5a4SJacob Faibussowitsch { 150847c6ae99SBarry Smith struct DMCompositeLink *next; 150947c6ae99SBarry Smith PetscScalar *garray, *larray; 151047c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 151147c6ae99SBarry Smith 151247c6ae99SBarry Smith PetscFunctionBegin; 151347c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 151447c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 151539d35262SVincent Le Chenadec 151648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 151739d35262SVincent Le Chenadec 15189566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 15199566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 152047c6ae99SBarry Smith 152115229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 152239d35262SVincent Le Chenadec next = com->next; 152347c6ae99SBarry Smith while (next) { 152447c6ae99SBarry Smith Vec local, global; 152547c6ae99SBarry Smith PetscInt N; 152647c6ae99SBarry Smith 15279566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15289566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(global, &N)); 15299566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15309566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15319566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15329566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, mode, local)); 15339566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, mode, local)); 15349566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15359566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15369566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15379566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 153839d35262SVincent Le Chenadec 153906ebdd98SJed Brown larray += next->nlocal; 154039d35262SVincent Le Chenadec garray += next->n; 154147c6ae99SBarry Smith next = next->next; 154247c6ae99SBarry Smith } 154347c6ae99SBarry Smith 15449566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 15459566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 15463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 154747c6ae99SBarry Smith } 154847c6ae99SBarry Smith 154966976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1550d71ae5a4SJacob Faibussowitsch { 15510c010503SBarry Smith PetscFunctionBegin; 155239d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 155339d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 155439d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 4); 15553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 155639d35262SVincent Le Chenadec } 155739d35262SVincent Le Chenadec 155866976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalBegin_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1559d71ae5a4SJacob Faibussowitsch { 156039d35262SVincent Le Chenadec struct DMCompositeLink *next; 156139d35262SVincent Le Chenadec PetscScalar *larray, *garray; 156239d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 156339d35262SVincent Le Chenadec 156439d35262SVincent Le Chenadec PetscFunctionBegin; 156539d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 156639d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 156739d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 156839d35262SVincent Le Chenadec 156948a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 157039d35262SVincent Le Chenadec 15719566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 15729566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 157339d35262SVincent Le Chenadec 157415229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 157539d35262SVincent Le Chenadec next = com->next; 157639d35262SVincent Le Chenadec while (next) { 157739d35262SVincent Le Chenadec Vec global, local; 157839d35262SVincent Le Chenadec 15799566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15809566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15819566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15829566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15839566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, mode, global)); 15849566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, mode, global)); 15859566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15869566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15879566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15889566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 158939d35262SVincent Le Chenadec 159039d35262SVincent Le Chenadec garray += next->n; 159139d35262SVincent Le Chenadec larray += next->nlocal; 159239d35262SVincent Le Chenadec next = next->next; 159339d35262SVincent Le Chenadec } 159439d35262SVincent Le Chenadec 15959566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 15969566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 15973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 159839d35262SVincent Le Chenadec } 159939d35262SVincent Le Chenadec 160066976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1601d71ae5a4SJacob Faibussowitsch { 160239d35262SVincent Le Chenadec PetscFunctionBegin; 160339d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 160439d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 160539d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 160739d35262SVincent Le Chenadec } 160839d35262SVincent Le Chenadec 160966976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalBegin_Composite(DM dm, Vec vec1, InsertMode mode, Vec vec2) 1610d71ae5a4SJacob Faibussowitsch { 161139d35262SVincent Le Chenadec struct DMCompositeLink *next; 161239d35262SVincent Le Chenadec PetscScalar *array1, *array2; 161339d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 161439d35262SVincent Le Chenadec 161539d35262SVincent Le Chenadec PetscFunctionBegin; 161639d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 161739d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec1, VEC_CLASSID, 2); 161839d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec2, VEC_CLASSID, 4); 161939d35262SVincent Le Chenadec 162048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 162139d35262SVincent Le Chenadec 16229566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec1, &array1)); 16239566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec2, &array2)); 162439d35262SVincent Le Chenadec 162515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 162639d35262SVincent Le Chenadec next = com->next; 162739d35262SVincent Le Chenadec while (next) { 162839d35262SVincent Le Chenadec Vec local1, local2; 162939d35262SVincent Le Chenadec 16309566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local1)); 16319566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local1, array1)); 16329566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local2)); 16339566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local2, array2)); 16349566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalBegin(next->dm, local1, mode, local2)); 16359566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalEnd(next->dm, local1, mode, local2)); 16369566063dSJacob Faibussowitsch PetscCall(VecResetArray(local2)); 16379566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local2)); 16389566063dSJacob Faibussowitsch PetscCall(VecResetArray(local1)); 16399566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local1)); 164039d35262SVincent Le Chenadec 164139d35262SVincent Le Chenadec array1 += next->nlocal; 164239d35262SVincent Le Chenadec array2 += next->nlocal; 164339d35262SVincent Le Chenadec next = next->next; 164439d35262SVincent Le Chenadec } 164539d35262SVincent Le Chenadec 16469566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec1, NULL)); 16479566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec2, NULL)); 16483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164939d35262SVincent Le Chenadec } 165039d35262SVincent Le Chenadec 165166976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1652d71ae5a4SJacob Faibussowitsch { 165339d35262SVincent Le Chenadec PetscFunctionBegin; 165439d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 165539d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 165639d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16580c010503SBarry Smith } 165947c6ae99SBarry Smith 16606ae3a549SBarry Smith /*MC 1661dce8aebaSBarry Smith DMCOMPOSITE = "composite" - A `DM` object that is used to manage data for a collection of `DM` 16626ae3a549SBarry Smith 16636ae3a549SBarry Smith Level: intermediate 16646ae3a549SBarry Smith 1665db781477SPatrick Sanan .seealso: `DMType`, `DM`, `DMDACreate()`, `DMCreate()`, `DMSetType()`, `DMCompositeCreate()` 16666ae3a549SBarry Smith M*/ 16676ae3a549SBarry Smith 1668d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1669d71ae5a4SJacob Faibussowitsch { 1670a4121054SBarry Smith DM_Composite *com; 1671a4121054SBarry Smith 1672a4121054SBarry Smith PetscFunctionBegin; 16734dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&com)); 1674a4121054SBarry Smith p->data = com; 1675a4121054SBarry Smith com->n = 0; 16767ac2b803SAlex Fikl com->nghost = 0; 16770298fd71SBarry Smith com->next = NULL; 1678a4121054SBarry Smith com->nDM = 0; 1679a4121054SBarry Smith 1680a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1681a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1682184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 16834d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 168416621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1685a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 168614354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 168725296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 168825296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1689e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1690a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1691a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 169239d35262SVincent Le Chenadec p->ops->localtoglobalbegin = DMLocalToGlobalBegin_Composite; 169339d35262SVincent Le Chenadec p->ops->localtoglobalend = DMLocalToGlobalEnd_Composite; 169439d35262SVincent Le Chenadec p->ops->localtolocalbegin = DMLocalToLocalBegin_Composite; 169539d35262SVincent Le Chenadec p->ops->localtolocalend = DMLocalToLocalEnd_Composite; 1696a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1697a4121054SBarry Smith p->ops->view = DMView_Composite; 1698a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1699e10fd815SStefano Zampini 17009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)p, "DMSetUpGLVisViewer_C", DMSetUpGLVisViewer_Composite)); 17013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1702a4121054SBarry Smith } 1703a4121054SBarry Smith 17041fd49c25SBarry Smith /*@ 1705dce8aebaSBarry Smith DMCompositeCreate - Creates a `DMCOMPOSITE`, used to generate "composite" 17060c010503SBarry Smith vectors made up of several subvectors. 17070c010503SBarry Smith 1708d083f849SBarry Smith Collective 170947c6ae99SBarry Smith 171047c6ae99SBarry Smith Input Parameter: 17110c010503SBarry Smith . comm - the processors that will share the global vector 17120c010503SBarry Smith 17132fe279fdSBarry Smith Output Parameter: 1714dce8aebaSBarry Smith . packer - the `DMCOMPOSITE` object 171547c6ae99SBarry Smith 171647c6ae99SBarry Smith Level: advanced 171747c6ae99SBarry Smith 171860225df5SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCompositeScatter()`, `DMCreate()` 1719db781477SPatrick Sanan `DMCompositeGather()`, `DMCreateGlobalVector()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()` 1720db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 172147c6ae99SBarry Smith @*/ 1722d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeCreate(MPI_Comm comm, DM *packer) 1723d71ae5a4SJacob Faibussowitsch { 172447c6ae99SBarry Smith PetscFunctionBegin; 17254f572ea9SToby Isaac PetscAssertPointer(packer, 2); 17269566063dSJacob Faibussowitsch PetscCall(DMCreate(comm, packer)); 17279566063dSJacob Faibussowitsch PetscCall(DMSetType(*packer, DMCOMPOSITE)); 17283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 172947c6ae99SBarry Smith } 1730