1ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 2af0996ceSBarry Smith #include <petsc/private/isimpl.h> 3e10fd815SStefano Zampini #include <petsc/private/glvisviewerimpl.h> 42764a2aaSMatthew G. Knepley #include <petscds.h> 547c6ae99SBarry Smith 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 8dce8aebaSBarry Smith separate components `DM` in a `DMCOMPOSITE` to build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1020f4b53cSBarry Smith Logically Collective; No Fortran Support 1147c6ae99SBarry Smith 12d8d19677SJose E. Roman Input Parameters: 1347c6ae99SBarry Smith + dm - the composite object 1460225df5SJacob Faibussowitsch - FormCoupleLocations - routine to set the nonzero locations in the matrix 1547c6ae99SBarry Smith 1647c6ae99SBarry Smith Level: advanced 1747c6ae99SBarry Smith 18dce8aebaSBarry Smith Note: 19dce8aebaSBarry Smith See `DMSetApplicationContext()` and `DMGetApplicationContext()` for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 22dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 2347c6ae99SBarry Smith @*/ 24d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeSetCoupling(DM dm, PetscErrorCode (*FormCoupleLocations)(DM, Mat, PetscInt *, PetscInt *, PetscInt, PetscInt, PetscInt, PetscInt)) 25d71ae5a4SJacob Faibussowitsch { 2647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 2771b14b3eSStefano Zampini PetscBool flg; 2847c6ae99SBarry Smith 2947c6ae99SBarry Smith PetscFunctionBegin; 309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 317a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 3247c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3447c6ae99SBarry Smith } 3547c6ae99SBarry Smith 3666976f2fSJacob Faibussowitsch static PetscErrorCode DMDestroy_Composite(DM dm) 37d71ae5a4SJacob Faibussowitsch { 3847c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith PetscFunctionBegin; 4247c6ae99SBarry Smith next = com->next; 4347c6ae99SBarry Smith while (next) { 4447c6ae99SBarry Smith prev = next; 4547c6ae99SBarry Smith next = next->next; 469566063dSJacob Faibussowitsch PetscCall(DMDestroy(&prev->dm)); 479566063dSJacob Faibussowitsch PetscCall(PetscFree(prev->grstarts)); 489566063dSJacob Faibussowitsch PetscCall(PetscFree(prev)); 4947c6ae99SBarry Smith } 509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)dm, "DMSetUpGLVisViewer_C", NULL)); 51435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 529566063dSJacob Faibussowitsch PetscCall(PetscFree(com)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5447c6ae99SBarry Smith } 5547c6ae99SBarry Smith 5666976f2fSJacob Faibussowitsch static PetscErrorCode DMView_Composite(DM dm, PetscViewer v) 57d71ae5a4SJacob Faibussowitsch { 5847c6ae99SBarry Smith PetscBool iascii; 5947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 6047c6ae99SBarry Smith 6147c6ae99SBarry Smith PetscFunctionBegin; 629566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)v, PETSCVIEWERASCII, &iascii)); 6347c6ae99SBarry Smith if (iascii) { 6447c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6547c6ae99SBarry Smith PetscInt i; 6647c6ae99SBarry Smith 679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "DM (%s)\n", ((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix")); 6863a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " contains %" PetscInt_FMT " DMs\n", com->nDM)); 699566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 7047c6ae99SBarry Smith for (i = 0; lnk; lnk = lnk->next, i++) { 7163a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "Link %" PetscInt_FMT ": DM of type %s\n", i, ((PetscObject)lnk->dm)->type_name)); 729566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 739566063dSJacob Faibussowitsch PetscCall(DMView(lnk->dm, v)); 749566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7547c6ae99SBarry Smith } 769566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7747c6ae99SBarry Smith } 783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7947c6ae99SBarry Smith } 8047c6ae99SBarry Smith 8147c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8266976f2fSJacob Faibussowitsch static PetscErrorCode DMSetUp_Composite(DM dm) 83d71ae5a4SJacob Faibussowitsch { 8447c6ae99SBarry Smith PetscInt nprev = 0; 8547c6ae99SBarry Smith PetscMPIInt rank, size; 8647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 8747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 8847c6ae99SBarry Smith PetscLayout map; 8947c6ae99SBarry Smith 9047c6ae99SBarry Smith PetscFunctionBegin; 9128b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Packer has already been setup"); 929566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(PetscObjectComm((PetscObject)dm), &map)); 939566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetLocalSize(map, com->n)); 949566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(map, PETSC_DETERMINE)); 959566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetBlockSize(map, 1)); 969566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(map)); 979566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetSize(map, &com->N)); 989566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetRange(map, &com->rstart, NULL)); 999566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&map)); 10047c6ae99SBarry Smith 1019ae5db72SJed Brown /* now set the rstart for each linked vector */ 1029566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 1039566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size)); 10447c6ae99SBarry Smith while (next) { 10547c6ae99SBarry Smith next->rstart = nprev; 10606ebdd98SJed Brown nprev += next->n; 10747c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 1089566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &next->grstarts)); 1099566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgather(&next->grstart, 1, MPIU_INT, next->grstarts, 1, MPIU_INT, PetscObjectComm((PetscObject)dm))); 11047c6ae99SBarry Smith next = next->next; 11147c6ae99SBarry Smith } 11247c6ae99SBarry Smith com->setup = PETSC_TRUE; 1133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11447c6ae99SBarry Smith } 11547c6ae99SBarry Smith 11673e31fe2SJed Brown /*@ 117aaa8cc7dSPierre Jolivet DMCompositeGetNumberDM - Gets the number of `DM` objects in the `DMCOMPOSITE` 11847c6ae99SBarry Smith representation. 11947c6ae99SBarry Smith 12047c6ae99SBarry Smith Not Collective 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith Input Parameter: 123dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 12447c6ae99SBarry Smith 12547c6ae99SBarry Smith Output Parameter: 126dce8aebaSBarry Smith . nDM - the number of `DM` 12747c6ae99SBarry Smith 12847c6ae99SBarry Smith Level: beginner 12947c6ae99SBarry Smith 130dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 13147c6ae99SBarry Smith @*/ 132d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetNumberDM(DM dm, PetscInt *nDM) 133d71ae5a4SJacob Faibussowitsch { 13447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 13571b14b3eSStefano Zampini PetscBool flg; 1365fd66863SKarl Rupp 13747c6ae99SBarry Smith PetscFunctionBegin; 13847c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 1399566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1407a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 14147c6ae99SBarry Smith *nDM = com->nDM; 1423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14347c6ae99SBarry Smith } 14447c6ae99SBarry Smith 14547c6ae99SBarry Smith /*@C 14647c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 14747c6ae99SBarry Smith representation. 14847c6ae99SBarry Smith 14920f4b53cSBarry Smith Collective 15047c6ae99SBarry Smith 1519ae5db72SJed Brown Input Parameters: 152dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 1539ae5db72SJed Brown - gvec - the global vector 1549ae5db72SJed Brown 1552fe279fdSBarry Smith Output Parameter: 156a4e35b19SJacob Faibussowitsch . ... - the packed parallel vectors, `NULL` for those that are not needed 15747c6ae99SBarry Smith 15847c6ae99SBarry Smith Level: advanced 15947c6ae99SBarry Smith 160dce8aebaSBarry Smith Note: 161dce8aebaSBarry Smith Use `DMCompositeRestoreAccess()` to return the vectors when you no longer need them 162dce8aebaSBarry Smith 16360225df5SJacob Faibussowitsch Fortran Notes: 164dce8aebaSBarry Smith Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 165dce8aebaSBarry Smith or use the alternative interface `DMCompositeGetAccessArray()`. 166dce8aebaSBarry Smith 167dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetEntries()`, `DMCompositeScatter()` 16847c6ae99SBarry Smith @*/ 169d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetAccess(DM dm, Vec gvec, ...) 170d71ae5a4SJacob Faibussowitsch { 17147c6ae99SBarry Smith va_list Argp; 17247c6ae99SBarry Smith struct DMCompositeLink *next; 17347c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 1745edff71fSBarry Smith PetscInt readonly; 17571b14b3eSStefano Zampini PetscBool flg; 17647c6ae99SBarry Smith 17747c6ae99SBarry Smith PetscFunctionBegin; 17847c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 17947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 1809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1817a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 18247c6ae99SBarry Smith next = com->next; 18348a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 18447c6ae99SBarry Smith 1859566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 18615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 18747c6ae99SBarry Smith va_start(Argp, gvec); 18847c6ae99SBarry Smith while (next) { 18947c6ae99SBarry Smith Vec *vec; 19047c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 1919ae5db72SJed Brown if (vec) { 1929566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, vec)); 1935edff71fSBarry Smith if (readonly) { 1945edff71fSBarry Smith const PetscScalar *array; 1959566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 1969566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 1979566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(*vec)); 1989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 1995edff71fSBarry Smith } else { 2005edff71fSBarry Smith PetscScalar *array; 2019566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 2029566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 2039566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 20447c6ae99SBarry Smith } 2055edff71fSBarry Smith } 20647c6ae99SBarry Smith next = next->next; 20747c6ae99SBarry Smith } 20847c6ae99SBarry Smith va_end(Argp); 2093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 21047c6ae99SBarry Smith } 21147c6ae99SBarry Smith 2125d83a8b1SBarry Smith /*@ 213f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 214f73e5cebSJed Brown representation. 215f73e5cebSJed Brown 21620f4b53cSBarry Smith Collective 217f73e5cebSJed Brown 218f73e5cebSJed Brown Input Parameters: 219dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 220f73e5cebSJed Brown . pvec - packed vector 221f73e5cebSJed Brown . nwanted - number of vectors wanted 222f13dfd9eSBarry Smith - wanted - sorted array of vectors wanted, or `NULL` to get all vectors, length `nwanted` 223f73e5cebSJed Brown 2242fe279fdSBarry Smith Output Parameter: 225f13dfd9eSBarry Smith . vecs - array of requested global vectors (must be previously allocated and of length `nwanted`) 226f73e5cebSJed Brown 227f73e5cebSJed Brown Level: advanced 228f73e5cebSJed Brown 229dce8aebaSBarry Smith Note: 230dce8aebaSBarry Smith Use `DMCompositeRestoreAccessArray()` to return the vectors when you no longer need them 231dce8aebaSBarry Smith 232dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetAccess()`, `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 233f73e5cebSJed Brown @*/ 2345d83a8b1SBarry Smith PetscErrorCode DMCompositeGetAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 235d71ae5a4SJacob Faibussowitsch { 236f73e5cebSJed Brown struct DMCompositeLink *link; 237f73e5cebSJed Brown PetscInt i, wnum; 238f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 239bee642f7SBarry Smith PetscInt readonly; 24071b14b3eSStefano Zampini PetscBool flg; 241f73e5cebSJed Brown 242f73e5cebSJed Brown PetscFunctionBegin; 243f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 244f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 2459566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 2467a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 24748a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 248f73e5cebSJed Brown 2499566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 250f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 251f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 252f73e5cebSJed Brown Vec v; 2539566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(link->dm, &v)); 254bee642f7SBarry Smith if (readonly) { 255bee642f7SBarry Smith const PetscScalar *array; 2569566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 2579566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2589566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 2599566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 260bee642f7SBarry Smith } else { 261bee642f7SBarry Smith PetscScalar *array; 2629566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 2639566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2649566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 265bee642f7SBarry Smith } 266f73e5cebSJed Brown vecs[wnum++] = v; 267f73e5cebSJed Brown } 268f73e5cebSJed Brown } 2693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 270f73e5cebSJed Brown } 271f73e5cebSJed Brown 2725d83a8b1SBarry Smith /*@ 2737ac2b803SAlex Fikl DMCompositeGetLocalAccessArray - Allows one to access the individual 2747ac2b803SAlex Fikl packed vectors in their local representation. 2757ac2b803SAlex Fikl 27620f4b53cSBarry Smith Collective 2777ac2b803SAlex Fikl 2787ac2b803SAlex Fikl Input Parameters: 279dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 2807ac2b803SAlex Fikl . pvec - packed vector 2817ac2b803SAlex Fikl . nwanted - number of vectors wanted 282f13dfd9eSBarry Smith - wanted - sorted array of vectors wanted, or `NULL` to get all vectors, length `nwanted` 2837ac2b803SAlex Fikl 2842fe279fdSBarry Smith Output Parameter: 285f13dfd9eSBarry Smith . vecs - array of requested local vectors (must be allocated and of length `nwanted`) 2867ac2b803SAlex Fikl 2877ac2b803SAlex Fikl Level: advanced 2887ac2b803SAlex Fikl 289dce8aebaSBarry Smith Note: 290dce8aebaSBarry Smith Use `DMCompositeRestoreLocalAccessArray()` to return the vectors 291dce8aebaSBarry Smith when you no longer need them. 292dce8aebaSBarry Smith 293dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreLocalAccessArray()`, `DMCompositeGetAccess()`, 294db781477SPatrick Sanan `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 2957ac2b803SAlex Fikl @*/ 2965d83a8b1SBarry Smith PetscErrorCode DMCompositeGetLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 297d71ae5a4SJacob Faibussowitsch { 2987ac2b803SAlex Fikl struct DMCompositeLink *link; 2997ac2b803SAlex Fikl PetscInt i, wnum; 3007ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 3017ac2b803SAlex Fikl PetscInt readonly; 3027ac2b803SAlex Fikl PetscInt nlocal = 0; 30371b14b3eSStefano Zampini PetscBool flg; 3047ac2b803SAlex Fikl 3057ac2b803SAlex Fikl PetscFunctionBegin; 3067ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 3077ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 3089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3097a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 31048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 3117ac2b803SAlex Fikl 3129566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 3137ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 3147ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 3157ac2b803SAlex Fikl Vec v; 3169566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(link->dm, &v)); 3177ac2b803SAlex Fikl if (readonly) { 3187ac2b803SAlex Fikl const PetscScalar *array; 3199566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 3209566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 321b1c3483dSMark Adams // this method does not make sense. The local vectors are not updated with a global-to-local and the user can not do it because it is locked 3229566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 3239566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 3247ac2b803SAlex Fikl } else { 3257ac2b803SAlex Fikl PetscScalar *array; 3269566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 3279566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 3289566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 3297ac2b803SAlex Fikl } 3307ac2b803SAlex Fikl vecs[wnum++] = v; 3317ac2b803SAlex Fikl } 3327ac2b803SAlex Fikl 3337ac2b803SAlex Fikl nlocal += link->nlocal; 3347ac2b803SAlex Fikl } 3353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3367ac2b803SAlex Fikl } 3377ac2b803SAlex Fikl 33847c6ae99SBarry Smith /*@C 339dce8aebaSBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with `DMCompositeGetAccess()` 34047c6ae99SBarry Smith representation. 34147c6ae99SBarry Smith 34220f4b53cSBarry Smith Collective 34347c6ae99SBarry Smith 3449ae5db72SJed Brown Input Parameters: 345dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 34647c6ae99SBarry Smith . gvec - the global vector 347a4e35b19SJacob Faibussowitsch - ... - the individual parallel vectors, `NULL` for those that are not needed 34847c6ae99SBarry Smith 34947c6ae99SBarry Smith Level: advanced 35047c6ae99SBarry Smith 351dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 352db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeScatter()`, 35342747ad1SJacob Faibussowitsch `DMCompositeGetAccess()` 35447c6ae99SBarry Smith @*/ 355d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreAccess(DM dm, Vec gvec, ...) 356d71ae5a4SJacob Faibussowitsch { 35747c6ae99SBarry Smith va_list Argp; 35847c6ae99SBarry Smith struct DMCompositeLink *next; 35947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 3605edff71fSBarry Smith PetscInt readonly; 36171b14b3eSStefano Zampini PetscBool flg; 36247c6ae99SBarry Smith 36347c6ae99SBarry Smith PetscFunctionBegin; 36447c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 36547c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 3669566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3677a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 36847c6ae99SBarry Smith next = com->next; 36948a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 37047c6ae99SBarry Smith 3719566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 37215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 37347c6ae99SBarry Smith va_start(Argp, gvec); 37447c6ae99SBarry Smith while (next) { 37547c6ae99SBarry Smith Vec *vec; 37647c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 3779ae5db72SJed Brown if (vec) { 3789566063dSJacob Faibussowitsch PetscCall(VecResetArray(*vec)); 3791baa6e33SBarry Smith if (readonly) PetscCall(VecLockReadPop(*vec)); 3809566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, vec)); 38147c6ae99SBarry Smith } 38247c6ae99SBarry Smith next = next->next; 38347c6ae99SBarry Smith } 38447c6ae99SBarry Smith va_end(Argp); 3853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38647c6ae99SBarry Smith } 38747c6ae99SBarry Smith 3885d83a8b1SBarry Smith /*@ 389dce8aebaSBarry Smith DMCompositeRestoreAccessArray - Returns the vectors obtained with `DMCompositeGetAccessArray()` 390f73e5cebSJed Brown 39120f4b53cSBarry Smith Collective 392f73e5cebSJed Brown 393f73e5cebSJed Brown Input Parameters: 394dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 395f73e5cebSJed Brown . pvec - packed vector 396f73e5cebSJed Brown . nwanted - number of vectors wanted 397f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 398f13dfd9eSBarry Smith - vecs - array of global vectors 399f73e5cebSJed Brown 400f73e5cebSJed Brown Level: advanced 401f73e5cebSJed Brown 402dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 403f73e5cebSJed Brown @*/ 4045d83a8b1SBarry Smith PetscErrorCode DMCompositeRestoreAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec vecs[]) 405d71ae5a4SJacob Faibussowitsch { 406f73e5cebSJed Brown struct DMCompositeLink *link; 407f73e5cebSJed Brown PetscInt i, wnum; 408f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 409bee642f7SBarry Smith PetscInt readonly; 41071b14b3eSStefano Zampini PetscBool flg; 411f73e5cebSJed Brown 412f73e5cebSJed Brown PetscFunctionBegin; 413f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 414f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4159566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4167a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 41748a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 418f73e5cebSJed Brown 4199566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 420f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 421f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 4229566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 42348a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4249566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(link->dm, &vecs[wnum])); 425f73e5cebSJed Brown wnum++; 426f73e5cebSJed Brown } 427f73e5cebSJed Brown } 4283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 429f73e5cebSJed Brown } 430f73e5cebSJed Brown 4315d83a8b1SBarry Smith /*@ 432dce8aebaSBarry Smith DMCompositeRestoreLocalAccessArray - Returns the vectors obtained with `DMCompositeGetLocalAccessArray()`. 4337ac2b803SAlex Fikl 43420f4b53cSBarry Smith Collective 4357ac2b803SAlex Fikl 4367ac2b803SAlex Fikl Input Parameters: 437dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 4387ac2b803SAlex Fikl . pvec - packed vector 4397ac2b803SAlex Fikl . nwanted - number of vectors wanted 440f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 441f13dfd9eSBarry Smith - vecs - array of local vectors 4427ac2b803SAlex Fikl 4437ac2b803SAlex Fikl Level: advanced 4447ac2b803SAlex Fikl 445dce8aebaSBarry Smith Note: 446f13dfd9eSBarry Smith `nwanted` and `wanted` must match the values given to `DMCompositeGetLocalAccessArray()` 4477ac2b803SAlex Fikl otherwise the call will fail. 4487ac2b803SAlex Fikl 449dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetLocalAccessArray()`, `DMCompositeRestoreAccessArray()`, 450db781477SPatrick Sanan `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, 451db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeGather()` 4527ac2b803SAlex Fikl @*/ 4535d83a8b1SBarry Smith PetscErrorCode DMCompositeRestoreLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt wanted[], Vec *vecs) 454d71ae5a4SJacob Faibussowitsch { 4557ac2b803SAlex Fikl struct DMCompositeLink *link; 4567ac2b803SAlex Fikl PetscInt i, wnum; 4577ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 4587ac2b803SAlex Fikl PetscInt readonly; 45971b14b3eSStefano Zampini PetscBool flg; 4607ac2b803SAlex Fikl 4617ac2b803SAlex Fikl PetscFunctionBegin; 4627ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 4637ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4649566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4657a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 46648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 4677ac2b803SAlex Fikl 4689566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 4697ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 4707ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 4719566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 47248a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4739566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(link->dm, &vecs[wnum])); 4747ac2b803SAlex Fikl wnum++; 4757ac2b803SAlex Fikl } 4767ac2b803SAlex Fikl } 4773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4787ac2b803SAlex Fikl } 4797ac2b803SAlex Fikl 48047c6ae99SBarry Smith /*@C 48147c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 48247c6ae99SBarry Smith 48320f4b53cSBarry Smith Collective 48447c6ae99SBarry Smith 4859ae5db72SJed Brown Input Parameters: 486dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 48747c6ae99SBarry Smith . gvec - the global vector 488a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for those that are not needed 48947c6ae99SBarry Smith 49047c6ae99SBarry Smith Level: advanced 49147c6ae99SBarry Smith 492dce8aebaSBarry Smith Note: 493dce8aebaSBarry Smith `DMCompositeScatterArray()` is a non-variadic alternative that is often more convenient for library callers and is 4946f3c3dcfSJed Brown accessible from Fortran. 4956f3c3dcfSJed Brown 496dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 497db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 498db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 499db781477SPatrick Sanan `DMCompositeScatterArray()` 50047c6ae99SBarry Smith @*/ 501d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatter(DM dm, Vec gvec, ...) 502d71ae5a4SJacob Faibussowitsch { 50347c6ae99SBarry Smith va_list Argp; 50447c6ae99SBarry Smith struct DMCompositeLink *next; 505c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 50647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 50771b14b3eSStefano Zampini PetscBool flg; 50847c6ae99SBarry Smith 50947c6ae99SBarry Smith PetscFunctionBegin; 51047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 51147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5129566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5137a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 51448a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 51547c6ae99SBarry Smith 51615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 51747c6ae99SBarry Smith va_start(Argp, gvec); 5188fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 5199ae5db72SJed Brown Vec local; 5209ae5db72SJed Brown local = va_arg(Argp, Vec); 5219ae5db72SJed Brown if (local) { 5229ae5db72SJed Brown Vec global; 5235edff71fSBarry Smith const PetscScalar *array; 52463a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 5259566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5269566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5279566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 5289566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, local)); 5299566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, local)); 5309566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5319566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5329566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 53347c6ae99SBarry Smith } 53447c6ae99SBarry Smith } 53547c6ae99SBarry Smith va_end(Argp); 5363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 53747c6ae99SBarry Smith } 53847c6ae99SBarry Smith 5396f3c3dcfSJed Brown /*@ 5406f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 5416f3c3dcfSJed Brown 54220f4b53cSBarry Smith Collective 5436f3c3dcfSJed Brown 5446f3c3dcfSJed Brown Input Parameters: 545dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 5466f3c3dcfSJed Brown . gvec - the global vector 547a2b725a8SWilliam Gropp - lvecs - array of local vectors, NULL for any that are not needed 5486f3c3dcfSJed Brown 5496f3c3dcfSJed Brown Level: advanced 5506f3c3dcfSJed Brown 5516f3c3dcfSJed Brown Note: 552dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeScatter()` 5536f3c3dcfSJed Brown 554dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()` 555db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 556db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 5576f3c3dcfSJed Brown @*/ 558d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatterArray(DM dm, Vec gvec, Vec *lvecs) 559d71ae5a4SJacob Faibussowitsch { 5606f3c3dcfSJed Brown struct DMCompositeLink *next; 5616f3c3dcfSJed Brown PetscInt i; 5626f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 56371b14b3eSStefano Zampini PetscBool flg; 5646f3c3dcfSJed Brown 5656f3c3dcfSJed Brown PetscFunctionBegin; 5666f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 5676f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5689566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5697a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 57048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 5716f3c3dcfSJed Brown 57215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 5736f3c3dcfSJed Brown for (i = 0, next = com->next; next; next = next->next, i++) { 5746f3c3dcfSJed Brown if (lvecs[i]) { 5756f3c3dcfSJed Brown Vec global; 576c5d31e75SLisandro Dalcin const PetscScalar *array; 5776f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 3); 5789566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5799566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5809566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, (PetscScalar *)array + next->rstart)); 5819566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, lvecs[i])); 5829566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, lvecs[i])); 5839566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5849566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5859566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 5866f3c3dcfSJed Brown } 5876f3c3dcfSJed Brown } 5883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5896f3c3dcfSJed Brown } 5906f3c3dcfSJed Brown 59147c6ae99SBarry Smith /*@C 59247c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 59347c6ae99SBarry Smith 59420f4b53cSBarry Smith Collective 59547c6ae99SBarry Smith 596d8d19677SJose E. Roman Input Parameters: 597dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 598dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 599a4e35b19SJacob Faibussowitsch . gvec - the global vector 600a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for any that are not needed 60147c6ae99SBarry Smith 60247c6ae99SBarry Smith Level: advanced 60347c6ae99SBarry Smith 60460225df5SJacob Faibussowitsch Fortran Notes: 605dce8aebaSBarry Smith Fortran users should use `DMCompositeGatherArray()` 606f5f57ec0SBarry Smith 607dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 608db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 609db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 61047c6ae99SBarry Smith @*/ 611d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGather(DM dm, InsertMode imode, Vec gvec, ...) 612d71ae5a4SJacob Faibussowitsch { 61347c6ae99SBarry Smith va_list Argp; 61447c6ae99SBarry Smith struct DMCompositeLink *next; 61547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 616c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 61771b14b3eSStefano Zampini PetscBool flg; 61847c6ae99SBarry Smith 61947c6ae99SBarry Smith PetscFunctionBegin; 62047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 621064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6229566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6237a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 62448a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 62547c6ae99SBarry Smith 62615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6271dac896bSSatish Balay va_start(Argp, gvec); 6288fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 6299ae5db72SJed Brown Vec local; 6309ae5db72SJed Brown local = va_arg(Argp, Vec); 6319ae5db72SJed Brown if (local) { 63247c6ae99SBarry Smith PetscScalar *array; 6339ae5db72SJed Brown Vec global; 63463a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 6359566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6369566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6379566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6389566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, imode, global)); 6399566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, imode, global)); 6409566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6419566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6429566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 64347c6ae99SBarry Smith } 64447c6ae99SBarry Smith } 64547c6ae99SBarry Smith va_end(Argp); 6463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 64747c6ae99SBarry Smith } 64847c6ae99SBarry Smith 6496f3c3dcfSJed Brown /*@ 6506f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 6516f3c3dcfSJed Brown 65220f4b53cSBarry Smith Collective 6536f3c3dcfSJed Brown 654d8d19677SJose E. Roman Input Parameters: 655dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 6566f3c3dcfSJed Brown . gvec - the global vector 657dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 6586f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 6596f3c3dcfSJed Brown 6606f3c3dcfSJed Brown Level: advanced 6616f3c3dcfSJed Brown 662dce8aebaSBarry Smith Note: 663dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeGather()`. 6646f3c3dcfSJed Brown 665dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 666db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 667db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()`, 6686f3c3dcfSJed Brown @*/ 669d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGatherArray(DM dm, InsertMode imode, Vec gvec, Vec *lvecs) 670d71ae5a4SJacob Faibussowitsch { 6716f3c3dcfSJed Brown struct DMCompositeLink *next; 6726f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 6736f3c3dcfSJed Brown PetscInt i; 67471b14b3eSStefano Zampini PetscBool flg; 6756f3c3dcfSJed Brown 6766f3c3dcfSJed Brown PetscFunctionBegin; 6776f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 678064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6799566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6807a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 68148a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 6826f3c3dcfSJed Brown 68315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6846f3c3dcfSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) { 6856f3c3dcfSJed Brown if (lvecs[i]) { 6866f3c3dcfSJed Brown PetscScalar *array; 6876f3c3dcfSJed Brown Vec global; 688064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 4); 6899566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6909566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6919566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6929566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, lvecs[i], imode, global)); 6939566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, lvecs[i], imode, global)); 6949566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6959566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6969566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 6976f3c3dcfSJed Brown } 6986f3c3dcfSJed Brown } 6993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7006f3c3dcfSJed Brown } 7016f3c3dcfSJed Brown 702f5f57ec0SBarry Smith /*@ 703dce8aebaSBarry Smith DMCompositeAddDM - adds a `DM` vector to a `DMCOMPOSITE` 70447c6ae99SBarry Smith 70520f4b53cSBarry Smith Collective 70647c6ae99SBarry Smith 707d8d19677SJose E. Roman Input Parameters: 708dce8aebaSBarry Smith + dmc - the `DMCOMPOSITE` object 709dce8aebaSBarry Smith - dm - the `DM` object 71047c6ae99SBarry Smith 71147c6ae99SBarry Smith Level: advanced 71247c6ae99SBarry Smith 71342747ad1SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeGather()`, `DMCreateGlobalVector()`, 714db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 715db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 71647c6ae99SBarry Smith @*/ 717d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeAddDM(DM dmc, DM dm) 718d71ae5a4SJacob Faibussowitsch { 71906ebdd98SJed Brown PetscInt n, nlocal; 72047c6ae99SBarry Smith struct DMCompositeLink *mine, *next; 72106ebdd98SJed Brown Vec global, local; 72247c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmc->data; 72371b14b3eSStefano Zampini PetscBool flg; 72447c6ae99SBarry Smith 72547c6ae99SBarry Smith PetscFunctionBegin; 72647c6ae99SBarry Smith PetscValidHeaderSpecific(dmc, DM_CLASSID, 1); 72747c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 2); 7289566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dmc, DMCOMPOSITE, &flg)); 7297a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 73047c6ae99SBarry Smith next = com->next; 73128b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dmc), PETSC_ERR_ARG_WRONGSTATE, "Cannot add a DM once you have used the DMComposite"); 73247c6ae99SBarry Smith 73347c6ae99SBarry Smith /* create new link */ 7349566063dSJacob Faibussowitsch PetscCall(PetscNew(&mine)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 736cac35740SJunchao Zhang PetscCall(DMCreateGlobalVector(dm, &global)); // Not using DMGetGlobalVector() since it will stash the vector with a type decided by dm, 737cac35740SJunchao Zhang PetscCall(VecGetLocalSize(global, &n)); // while we may want to set dmc's vectype later, say via DMSetFromOptions(dmc), and we 738cac35740SJunchao Zhang PetscCall(VecDestroy(&global)); // want to propagate the type to dm. 739cac35740SJunchao Zhang PetscCall(DMCreateLocalVector(dm, &local)); // Not using DMGetLocalVector(), same reason as above. 7409566063dSJacob Faibussowitsch PetscCall(VecGetSize(local, &nlocal)); 741cac35740SJunchao Zhang PetscCall(VecDestroy(&local)); 7428865f1eaSKarl Rupp 74347c6ae99SBarry Smith mine->n = n; 74406ebdd98SJed Brown mine->nlocal = nlocal; 74547c6ae99SBarry Smith mine->dm = dm; 7460298fd71SBarry Smith mine->next = NULL; 74747c6ae99SBarry Smith com->n += n; 7487ac2b803SAlex Fikl com->nghost += nlocal; 74947c6ae99SBarry Smith 75047c6ae99SBarry Smith /* add to end of list */ 7518865f1eaSKarl Rupp if (!next) com->next = mine; 7528865f1eaSKarl Rupp else { 75347c6ae99SBarry Smith while (next->next) next = next->next; 75447c6ae99SBarry Smith next->next = mine; 75547c6ae99SBarry Smith } 75647c6ae99SBarry Smith com->nDM++; 75747c6ae99SBarry Smith com->nmine++; 7583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 75947c6ae99SBarry Smith } 76047c6ae99SBarry Smith 7619804daf3SBarry Smith #include <petscdraw.h> 76226887b52SJed Brown PETSC_EXTERN PetscErrorCode VecView_MPI(Vec, PetscViewer); 76366976f2fSJacob Faibussowitsch static PetscErrorCode VecView_DMComposite(Vec gvec, PetscViewer viewer) 764d71ae5a4SJacob Faibussowitsch { 76547c6ae99SBarry Smith DM dm; 76647c6ae99SBarry Smith struct DMCompositeLink *next; 76747c6ae99SBarry Smith PetscBool isdraw; 768cef07954SSatish Balay DM_Composite *com; 76947c6ae99SBarry Smith 77047c6ae99SBarry Smith PetscFunctionBegin; 7719566063dSJacob Faibussowitsch PetscCall(VecGetDM(gvec, &dm)); 7727a8be351SBarry Smith PetscCheck(dm, PetscObjectComm((PetscObject)gvec), PETSC_ERR_ARG_WRONG, "Vector not generated from a DMComposite"); 77347c6ae99SBarry Smith com = (DM_Composite *)dm->data; 77447c6ae99SBarry Smith next = com->next; 77547c6ae99SBarry Smith 7769566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 77747c6ae99SBarry Smith if (!isdraw) { 77847c6ae99SBarry Smith /* do I really want to call this? */ 7799566063dSJacob Faibussowitsch PetscCall(VecView_MPI(gvec, viewer)); 78047c6ae99SBarry Smith } else { 78147c6ae99SBarry Smith PetscInt cnt = 0; 78247c6ae99SBarry Smith 78315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 78447c6ae99SBarry Smith while (next) { 78547c6ae99SBarry Smith Vec vec; 786ca4278abSLisandro Dalcin const PetscScalar *array; 78747c6ae99SBarry Smith PetscInt bs; 78847c6ae99SBarry Smith 7899ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 7909566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &vec)); 7919566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 7929566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(vec, (PetscScalar *)array + next->rstart)); 7939566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 7949566063dSJacob Faibussowitsch PetscCall(VecView(vec, viewer)); 7959566063dSJacob Faibussowitsch PetscCall(VecResetArray(vec)); 7969566063dSJacob Faibussowitsch PetscCall(VecGetBlockSize(vec, &bs)); 7979566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &vec)); 7989566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, bs)); 79947c6ae99SBarry Smith cnt += bs; 80047c6ae99SBarry Smith next = next->next; 80147c6ae99SBarry Smith } 8029566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, -cnt)); 80347c6ae99SBarry Smith } 8043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 80547c6ae99SBarry Smith } 80647c6ae99SBarry Smith 80766976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateGlobalVector_Composite(DM dm, Vec *gvec) 808d71ae5a4SJacob Faibussowitsch { 80947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 81047c6ae99SBarry Smith 81147c6ae99SBarry Smith PetscFunctionBegin; 81247c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8139566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8149566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8159566063dSJacob Faibussowitsch PetscCall(VecCreate(PetscObjectComm((PetscObject)dm), gvec)); 8169566063dSJacob Faibussowitsch PetscCall(VecSetType(*gvec, dm->vectype)); 8179566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*gvec, com->n, com->N)); 8189566063dSJacob Faibussowitsch PetscCall(VecSetDM(*gvec, dm)); 8199566063dSJacob Faibussowitsch PetscCall(VecSetOperation(*gvec, VECOP_VIEW, (void (*)(void))VecView_DMComposite)); 8203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 82147c6ae99SBarry Smith } 82247c6ae99SBarry Smith 82366976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateLocalVector_Composite(DM dm, Vec *lvec) 824d71ae5a4SJacob Faibussowitsch { 82547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 82647c6ae99SBarry Smith 82747c6ae99SBarry Smith PetscFunctionBegin; 82847c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 82947c6ae99SBarry Smith if (!com->setup) { 8309566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8319566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 83247c6ae99SBarry Smith } 8339566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, lvec)); 8349566063dSJacob Faibussowitsch PetscCall(VecSetType(*lvec, dm->vectype)); 8359566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*lvec, com->nghost, PETSC_DECIDE)); 8369566063dSJacob Faibussowitsch PetscCall(VecSetDM(*lvec, dm)); 8373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 83847c6ae99SBarry Smith } 83947c6ae99SBarry Smith 84047c6ae99SBarry Smith /*@C 841dce8aebaSBarry Smith DMCompositeGetISLocalToGlobalMappings - gets an `ISLocalToGlobalMapping` for each `DM` in the `DMCOMPOSITE`, maps to the composite global space 84247c6ae99SBarry Smith 84320f4b53cSBarry Smith Collective; No Fortran Support 84447c6ae99SBarry Smith 84547c6ae99SBarry Smith Input Parameter: 846dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 84747c6ae99SBarry Smith 8482fe279fdSBarry Smith Output Parameter: 8499ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 850dce8aebaSBarry Smith all the ghost points that individual ghosted `DMDA` may have. 85147c6ae99SBarry Smith 85247c6ae99SBarry Smith Level: advanced 85347c6ae99SBarry Smith 854dce8aebaSBarry Smith Note: 855f13dfd9eSBarry Smith Each entry of `ltogs` should be destroyed with `ISLocalToGlobalMappingDestroy()`, `ltogs` should be freed with `PetscFree()`. 85647c6ae99SBarry Smith 857dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 858db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 859c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 86047c6ae99SBarry Smith @*/ 861cc4c1da9SBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm, ISLocalToGlobalMapping *ltogs[]) 862d71ae5a4SJacob Faibussowitsch { 86347c6ae99SBarry Smith PetscInt i, *idx, n, cnt; 86447c6ae99SBarry Smith struct DMCompositeLink *next; 86547c6ae99SBarry Smith PetscMPIInt rank; 86647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 86771b14b3eSStefano Zampini PetscBool flg; 86847c6ae99SBarry Smith 86947c6ae99SBarry Smith PetscFunctionBegin; 87047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8719566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 8727a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 8739566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8749566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, ltogs)); 87547c6ae99SBarry Smith next = com->next; 8769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 87747c6ae99SBarry Smith 87815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 87947c6ae99SBarry Smith cnt = 0; 88047c6ae99SBarry Smith while (next) { 8816eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8826eb61c8cSJed Brown PetscMPIInt size; 88386994e45SJed Brown const PetscInt *suboff, *indices; 8846eb61c8cSJed Brown Vec global; 88547c6ae99SBarry Smith 8866eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8879566063dSJacob Faibussowitsch PetscCall(DMGetLocalToGlobalMapping(next->dm, <og)); 8889566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltog, &n)); 8899566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltog, &indices)); 8909566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &idx)); 89147c6ae99SBarry Smith 8926eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8939566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 8949566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRanges(global, &suboff)); 8959566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)global), &size)); 8966eb61c8cSJed Brown 8976eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 8986eb61c8cSJed Brown for (i = 0; i < n; i++) { 89986994e45SJed Brown PetscInt subi = indices[i], lo = 0, hi = size, t; 900e333b035SStefano Zampini /* There's no consensus on what a negative index means, 901e333b035SStefano Zampini except for skipping when setting the values in vectors and matrices */ 9029371c9d4SSatish Balay if (subi < 0) { 9039371c9d4SSatish Balay idx[i] = subi - next->grstarts[rank]; 9049371c9d4SSatish Balay continue; 9059371c9d4SSatish Balay } 9066eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 9076eb61c8cSJed Brown while (hi - lo > 1) { 9086eb61c8cSJed Brown t = lo + (hi - lo) / 2; 9096eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 9106eb61c8cSJed Brown else lo = t; 9116eb61c8cSJed Brown } 9126eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 9136eb61c8cSJed Brown } 9149566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltog, &indices)); 9159566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm), 1, n, idx, PETSC_OWN_POINTER, &(*ltogs)[cnt])); 9169566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 91747c6ae99SBarry Smith next = next->next; 91847c6ae99SBarry Smith cnt++; 91947c6ae99SBarry Smith } 9203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 92147c6ae99SBarry Smith } 92247c6ae99SBarry Smith 92387c85e80SJed Brown /*@C 9249ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 92587c85e80SJed Brown 92620f4b53cSBarry Smith Not Collective; No Fortran Support 92787c85e80SJed Brown 9284165533cSJose E. Roman Input Parameter: 929dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` 93087c85e80SJed Brown 9314165533cSJose E. Roman Output Parameter: 93215229ffcSPierre Jolivet . is - array of serial index sets for each component of the `DMCOMPOSITE` 93387c85e80SJed Brown 93487c85e80SJed Brown Level: intermediate 93587c85e80SJed Brown 93687c85e80SJed Brown Notes: 93787c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 93815229ffcSPierre Jolivet `MatGetLocalSubMatrix()`. In the future, the scatters for each entry in the `DMCOMPOSITE` may be merged into a single 9399ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 94087c85e80SJed Brown 941dce8aebaSBarry Smith To get the composite global indices at all local points (including ghosts), use `DMCompositeGetISLocalToGlobalMappings()`. 94287c85e80SJed Brown 943dce8aebaSBarry Smith To get index sets for pieces of the composite global vector, use `DMCompositeGetGlobalISs()`. 94487c85e80SJed Brown 945dce8aebaSBarry Smith Each returned `IS` should be destroyed with `ISDestroy()`, the array should be freed with `PetscFree()`. 94687c85e80SJed Brown 947f13dfd9eSBarry Smith Fortran Note: 948f13dfd9eSBarry Smith Pass in an array long enough to hold all the `IS`, see `DMCompositeGetNumberDM()` 949f13dfd9eSBarry Smith 950f13dfd9eSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetGlobalISs()`, `DMCompositeGetISLocalToGlobalMappings()`, `MatGetLocalSubMatrix()`, 951f13dfd9eSBarry Smith `MatCreateLocalRef()`, `DMCompositeGetNumberDM()` 95287c85e80SJed Brown @*/ 953cc4c1da9SBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm, IS *is[]) 954d71ae5a4SJacob Faibussowitsch { 95587c85e80SJed Brown DM_Composite *com = (DM_Composite *)dm->data; 95687c85e80SJed Brown struct DMCompositeLink *link; 95787c85e80SJed Brown PetscInt cnt, start; 95871b14b3eSStefano Zampini PetscBool flg; 95987c85e80SJed Brown 96087c85e80SJed Brown PetscFunctionBegin; 96187c85e80SJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 9624f572ea9SToby Isaac PetscAssertPointer(is, 2); 9639566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 9647a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 9659566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nmine, is)); 96606ebdd98SJed Brown for (cnt = 0, start = 0, link = com->next; link; start += link->nlocal, cnt++, link = link->next) { 967520db06cSJed Brown PetscInt bs; 9689566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, link->nlocal, start, 1, &(*is)[cnt])); 9699566063dSJacob Faibussowitsch PetscCall(DMGetBlockSize(link->dm, &bs)); 9709566063dSJacob Faibussowitsch PetscCall(ISSetBlockSize((*is)[cnt], bs)); 971520db06cSJed Brown } 9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 97387c85e80SJed Brown } 97487c85e80SJed Brown 97547c6ae99SBarry Smith /*@C 976dce8aebaSBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object in a `DMCOMPOSITE` 97747c6ae99SBarry Smith 97820f4b53cSBarry Smith Collective 97947c6ae99SBarry Smith 98047c6ae99SBarry Smith Input Parameter: 981dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 98247c6ae99SBarry Smith 9832fe279fdSBarry Smith Output Parameter: 98447c6ae99SBarry Smith . is - the array of index sets 98547c6ae99SBarry Smith 98647c6ae99SBarry Smith Level: advanced 98747c6ae99SBarry Smith 98847c6ae99SBarry Smith Notes: 989f13dfd9eSBarry Smith The `is` entries should be destroyed with `ISDestroy()`, `is` should be freed with `PetscFree()` 99047c6ae99SBarry Smith 99147c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 99247c6ae99SBarry Smith 993dce8aebaSBarry Smith Use `DMCompositeGetLocalISs()` for index sets in the packed local numbering, and 994dce8aebaSBarry Smith `DMCompositeGetISLocalToGlobalMappings()` for to map local sub-`DM` (including ghost) indices to packed global 9956eb61c8cSJed Brown indices. 99647c6ae99SBarry Smith 99760225df5SJacob Faibussowitsch Fortran Notes: 998dce8aebaSBarry Smith The output argument 'is' must be an allocated array of sufficient length, which can be learned using `DMCompositeGetNumberDM()`. 999f3cb0f7eSJed Brown 1000dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1001db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 1002c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 100347c6ae99SBarry Smith @*/ 1004d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetGlobalISs(DM dm, IS *is[]) 1005d71ae5a4SJacob Faibussowitsch { 100666bb578eSMark Adams PetscInt cnt = 0; 100747c6ae99SBarry Smith struct DMCompositeLink *next; 100847c6ae99SBarry Smith PetscMPIInt rank; 100947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 101071b14b3eSStefano Zampini PetscBool flg; 101147c6ae99SBarry Smith 101247c6ae99SBarry Smith PetscFunctionBegin; 101347c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 10149566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 10157a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 10167a8be351SBarry Smith PetscCheck(dm->setupcalled, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Must call DMSetUp() before"); 10179566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, is)); 101847c6ae99SBarry Smith next = com->next; 10199566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 102047c6ae99SBarry Smith 102115229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 102247c6ae99SBarry Smith while (next) { 1023e5e52638SMatthew G. Knepley PetscDS prob; 1024e5e52638SMatthew G. Knepley 10259566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PetscObjectComm((PetscObject)dm), next->n, next->grstart, 1, &(*is)[cnt])); 10269566063dSJacob Faibussowitsch PetscCall(DMGetDS(dm, &prob)); 1027e5e52638SMatthew G. Knepley if (prob) { 102865c226d8SMatthew G. Knepley MatNullSpace space; 102965c226d8SMatthew G. Knepley Mat pmat; 10300f21e855SMatthew G. Knepley PetscObject disc; 10310f21e855SMatthew G. Knepley PetscInt Nf; 103265c226d8SMatthew G. Knepley 10339566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(prob, &Nf)); 1034f24dd8d2SMatthew G. Knepley if (cnt < Nf) { 10359566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, cnt, &disc)); 10369566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nullspace", (PetscObject *)&space)); 10379566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nullspace", (PetscObject)space)); 10389566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nearnullspace", (PetscObject *)&space)); 10399566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nearnullspace", (PetscObject)space)); 10409566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "pmat", (PetscObject *)&pmat)); 10419566063dSJacob Faibussowitsch if (pmat) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "pmat", (PetscObject)pmat)); 104265c226d8SMatthew G. Knepley } 1043f24dd8d2SMatthew G. Knepley } 104447c6ae99SBarry Smith cnt++; 104547c6ae99SBarry Smith next = next->next; 104647c6ae99SBarry Smith } 10473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 104847c6ae99SBarry Smith } 104947c6ae99SBarry Smith 105066976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields, char ***fieldNames, IS **fields) 1051d71ae5a4SJacob Faibussowitsch { 10524d343eeaSMatthew G Knepley PetscInt nDM; 10534d343eeaSMatthew G Knepley DM *dms; 10544d343eeaSMatthew G Knepley PetscInt i; 10554d343eeaSMatthew G Knepley 10564d343eeaSMatthew G Knepley PetscFunctionBegin; 10579566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 10588865f1eaSKarl Rupp if (numFields) *numFields = nDM; 10599566063dSJacob Faibussowitsch PetscCall(DMCompositeGetGlobalISs(dm, fields)); 10604d343eeaSMatthew G Knepley if (fieldNames) { 10619566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, &dms)); 10629566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, fieldNames)); 10639566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 10644d343eeaSMatthew G Knepley for (i = 0; i < nDM; i++) { 10654d343eeaSMatthew G Knepley char buf[256]; 10664d343eeaSMatthew G Knepley const char *splitname; 10674d343eeaSMatthew G Knepley 10684d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 10694d343eeaSMatthew G Knepley splitname = ((PetscObject)dm)->name; 10704d343eeaSMatthew G Knepley if (!splitname) { 10719566063dSJacob Faibussowitsch PetscCall(PetscObjectGetOptionsPrefix((PetscObject)dms[i], &splitname)); 10724d343eeaSMatthew G Knepley if (splitname) { 10734d343eeaSMatthew G Knepley size_t len; 10749566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(buf, splitname, sizeof(buf))); 10758caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 10769566063dSJacob Faibussowitsch PetscCall(PetscStrlen(buf, &len)); 10774d343eeaSMatthew G Knepley if (buf[len - 1] == '_') buf[len - 1] = 0; /* Remove trailing underscore if it was used */ 10784d343eeaSMatthew G Knepley splitname = buf; 10794d343eeaSMatthew G Knepley } 10804d343eeaSMatthew G Knepley } 10814d343eeaSMatthew G Knepley if (!splitname) { 108263a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(buf, sizeof(buf), "%" PetscInt_FMT, i)); 10834d343eeaSMatthew G Knepley splitname = buf; 10844d343eeaSMatthew G Knepley } 10859566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(splitname, &(*fieldNames)[i])); 10864d343eeaSMatthew G Knepley } 10879566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 10884d343eeaSMatthew G Knepley } 10893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10904d343eeaSMatthew G Knepley } 10914d343eeaSMatthew G Knepley 1092e7c4fc90SDmitry Karpeev /* 1093e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 10940298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 1095e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 1096e7c4fc90SDmitry Karpeev */ 109766976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len, char ***namelist, IS **islist, DM **dmlist) 1098d71ae5a4SJacob Faibussowitsch { 1099e7c4fc90SDmitry Karpeev PetscInt nDM; 1100e7c4fc90SDmitry Karpeev PetscInt i; 1101e7c4fc90SDmitry Karpeev 1102e7c4fc90SDmitry Karpeev PetscFunctionBegin; 11039566063dSJacob Faibussowitsch PetscCall(DMCreateFieldIS_Composite(dm, len, namelist, islist)); 1104e7c4fc90SDmitry Karpeev if (dmlist) { 11059566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 11069566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, dmlist)); 11079566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, *dmlist)); 110848a46eb9SPierre Jolivet for (i = 0; i < nDM; i++) PetscCall(PetscObjectReference((PetscObject)((*dmlist)[i]))); 1109e7c4fc90SDmitry Karpeev } 11103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1111e7c4fc90SDmitry Karpeev } 1112e7c4fc90SDmitry Karpeev 111347c6ae99SBarry Smith /*@C 1114dce8aebaSBarry Smith DMCompositeGetLocalVectors - Gets local vectors for each part of a `DMCOMPOSITE` 1115dce8aebaSBarry Smith Use `DMCompositeRestoreLocalVectors()` to return them. 111647c6ae99SBarry Smith 111720f4b53cSBarry Smith Not Collective; No Fortran Support 111847c6ae99SBarry Smith 111947c6ae99SBarry Smith Input Parameter: 1120dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 112147c6ae99SBarry Smith 112247c6ae99SBarry Smith Output Parameter: 1123a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec`s 112447c6ae99SBarry Smith 112547c6ae99SBarry Smith Level: advanced 112647c6ae99SBarry Smith 1127dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1128db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1129db781477SPatrick Sanan `DMCompositeRestoreLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 113047c6ae99SBarry Smith @*/ 1131d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetLocalVectors(DM dm, ...) 1132d71ae5a4SJacob Faibussowitsch { 113347c6ae99SBarry Smith va_list Argp; 113447c6ae99SBarry Smith struct DMCompositeLink *next; 113547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 113671b14b3eSStefano Zampini PetscBool flg; 113747c6ae99SBarry Smith 113847c6ae99SBarry Smith PetscFunctionBegin; 113947c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11409566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11417a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 114247c6ae99SBarry Smith next = com->next; 114315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 114447c6ae99SBarry Smith va_start(Argp, dm); 114547c6ae99SBarry Smith while (next) { 114647c6ae99SBarry Smith Vec *vec; 114747c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11489566063dSJacob Faibussowitsch if (vec) PetscCall(DMGetLocalVector(next->dm, vec)); 114947c6ae99SBarry Smith next = next->next; 115047c6ae99SBarry Smith } 115147c6ae99SBarry Smith va_end(Argp); 11523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 115347c6ae99SBarry Smith } 115447c6ae99SBarry Smith 115547c6ae99SBarry Smith /*@C 1156dce8aebaSBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors for each part of a `DMCOMPOSITE` 115747c6ae99SBarry Smith 115820f4b53cSBarry Smith Not Collective; No Fortran Support 115947c6ae99SBarry Smith 116047c6ae99SBarry Smith Input Parameter: 1161dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 116247c6ae99SBarry Smith 116347c6ae99SBarry Smith Output Parameter: 1164a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec` 116547c6ae99SBarry Smith 116647c6ae99SBarry Smith Level: advanced 116747c6ae99SBarry Smith 1168dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1169db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1170db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 117147c6ae99SBarry Smith @*/ 1172d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreLocalVectors(DM dm, ...) 1173d71ae5a4SJacob Faibussowitsch { 117447c6ae99SBarry Smith va_list Argp; 117547c6ae99SBarry Smith struct DMCompositeLink *next; 117647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 117771b14b3eSStefano Zampini PetscBool flg; 117847c6ae99SBarry Smith 117947c6ae99SBarry Smith PetscFunctionBegin; 118047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11827a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 118347c6ae99SBarry Smith next = com->next; 118415229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 118547c6ae99SBarry Smith va_start(Argp, dm); 118647c6ae99SBarry Smith while (next) { 118747c6ae99SBarry Smith Vec *vec; 118847c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11899566063dSJacob Faibussowitsch if (vec) PetscCall(DMRestoreLocalVector(next->dm, vec)); 119047c6ae99SBarry Smith next = next->next; 119147c6ae99SBarry Smith } 119247c6ae99SBarry Smith va_end(Argp); 11933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 119447c6ae99SBarry Smith } 119547c6ae99SBarry Smith 119647c6ae99SBarry Smith /*@C 1197dce8aebaSBarry Smith DMCompositeGetEntries - Gets the `DM` for each entry in a `DMCOMPOSITE`. 119847c6ae99SBarry Smith 119947c6ae99SBarry Smith Not Collective 120047c6ae99SBarry Smith 120147c6ae99SBarry Smith Input Parameter: 1202dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 120347c6ae99SBarry Smith 120447c6ae99SBarry Smith Output Parameter: 1205a4e35b19SJacob Faibussowitsch . ... - the individual entries `DM` 120647c6ae99SBarry Smith 120747c6ae99SBarry Smith Level: advanced 120847c6ae99SBarry Smith 120960225df5SJacob Faibussowitsch Fortran Notes: 12105d83a8b1SBarry Smith Use `DMCompositeGetEntriesArray()` 1211f5f57ec0SBarry Smith 1212dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntriesArray()` 1213db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 121460225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 121547c6ae99SBarry Smith @*/ 1216d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntries(DM dm, ...) 1217d71ae5a4SJacob Faibussowitsch { 121847c6ae99SBarry Smith va_list Argp; 121947c6ae99SBarry Smith struct DMCompositeLink *next; 122047c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 122171b14b3eSStefano Zampini PetscBool flg; 122247c6ae99SBarry Smith 122347c6ae99SBarry Smith PetscFunctionBegin; 122447c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12259566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12267a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 122747c6ae99SBarry Smith next = com->next; 122815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 122947c6ae99SBarry Smith va_start(Argp, dm); 123047c6ae99SBarry Smith while (next) { 123147c6ae99SBarry Smith DM *dmn; 123247c6ae99SBarry Smith dmn = va_arg(Argp, DM *); 12339ae5db72SJed Brown if (dmn) *dmn = next->dm; 123447c6ae99SBarry Smith next = next->next; 123547c6ae99SBarry Smith } 123647c6ae99SBarry Smith va_end(Argp); 12373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 123847c6ae99SBarry Smith } 123947c6ae99SBarry Smith 1240cc4c1da9SBarry Smith /*@ 1241dce8aebaSBarry Smith DMCompositeGetEntriesArray - Gets the DM for each entry in a `DMCOMPOSITE` 12422fa5ba8aSJed Brown 12432fa5ba8aSJed Brown Not Collective 12442fa5ba8aSJed Brown 12452fa5ba8aSJed Brown Input Parameter: 1246dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 1247907376e6SBarry Smith 1248907376e6SBarry Smith Output Parameter: 1249dce8aebaSBarry Smith . dms - array of sufficient length (see `DMCompositeGetNumberDM()`) to hold the individual `DM` 12502fa5ba8aSJed Brown 12512fa5ba8aSJed Brown Level: advanced 12522fa5ba8aSJed Brown 1253dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntries()` 1254db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 125560225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 12562fa5ba8aSJed Brown @*/ 1257d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntriesArray(DM dm, DM dms[]) 1258d71ae5a4SJacob Faibussowitsch { 12592fa5ba8aSJed Brown struct DMCompositeLink *next; 12602fa5ba8aSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 12612fa5ba8aSJed Brown PetscInt i; 126271b14b3eSStefano Zampini PetscBool flg; 12632fa5ba8aSJed Brown 12642fa5ba8aSJed Brown PetscFunctionBegin; 12652fa5ba8aSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12669566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12677a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 126815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 12692fa5ba8aSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) dms[i] = next->dm; 12703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12712fa5ba8aSJed Brown } 12722fa5ba8aSJed Brown 1273e10fd815SStefano Zampini typedef struct { 1274e10fd815SStefano Zampini DM dm; 1275e10fd815SStefano Zampini PetscViewer *subv; 1276e10fd815SStefano Zampini Vec *vecs; 1277e10fd815SStefano Zampini } GLVisViewerCtx; 1278e10fd815SStefano Zampini 1279d71ae5a4SJacob Faibussowitsch static PetscErrorCode DestroyGLVisViewerCtx_Private(void *vctx) 1280d71ae5a4SJacob Faibussowitsch { 1281e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1282e10fd815SStefano Zampini PetscInt i, n; 1283e10fd815SStefano Zampini 1284e10fd815SStefano Zampini PetscFunctionBegin; 12859566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 128648a46eb9SPierre Jolivet for (i = 0; i < n; i++) PetscCall(PetscViewerDestroy(&ctx->subv[i])); 12879566063dSJacob Faibussowitsch PetscCall(PetscFree2(ctx->subv, ctx->vecs)); 12889566063dSJacob Faibussowitsch PetscCall(DMDestroy(&ctx->dm)); 12899566063dSJacob Faibussowitsch PetscCall(PetscFree(ctx)); 12903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1291e10fd815SStefano Zampini } 1292e10fd815SStefano Zampini 1293d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCompositeSampleGLVisFields_Private(PetscObject oX, PetscInt nf, PetscObject oXfield[], void *vctx) 1294d71ae5a4SJacob Faibussowitsch { 1295e10fd815SStefano Zampini Vec X = (Vec)oX; 1296e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1297e10fd815SStefano Zampini PetscInt i, n, cumf; 1298e10fd815SStefano Zampini 1299e10fd815SStefano Zampini PetscFunctionBegin; 13009566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 13019566063dSJacob Faibussowitsch PetscCall(DMCompositeGetAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 1302e10fd815SStefano Zampini for (i = 0, cumf = 0; i < n; i++) { 1303e10fd815SStefano Zampini PetscErrorCode (*g2l)(PetscObject, PetscInt, PetscObject[], void *); 1304e10fd815SStefano Zampini void *fctx; 1305e10fd815SStefano Zampini PetscInt nfi; 1306e10fd815SStefano Zampini 130734e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nfi, NULL, NULL, &g2l, NULL, &fctx)); 1308e10fd815SStefano Zampini if (!nfi) continue; 13091baa6e33SBarry Smith if (g2l) PetscCall((*g2l)((PetscObject)ctx->vecs[i], nfi, oXfield + cumf, fctx)); 1310f4f49eeaSPierre Jolivet else PetscCall(VecCopy(ctx->vecs[i], (Vec)oXfield[cumf])); 1311e10fd815SStefano Zampini cumf += nfi; 1312e10fd815SStefano Zampini } 13139566063dSJacob Faibussowitsch PetscCall(DMCompositeRestoreAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 13143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1315e10fd815SStefano Zampini } 1316e10fd815SStefano Zampini 1317d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMSetUpGLVisViewer_Composite(PetscObject odm, PetscViewer viewer) 1318d71ae5a4SJacob Faibussowitsch { 1319e10fd815SStefano Zampini DM dm = (DM)odm, *dms; 1320e10fd815SStefano Zampini Vec *Ufds; 1321e10fd815SStefano Zampini GLVisViewerCtx *ctx; 1322e10fd815SStefano Zampini PetscInt i, n, tnf, *sdim; 1323e10fd815SStefano Zampini char **fecs; 1324e10fd815SStefano Zampini 1325e10fd815SStefano Zampini PetscFunctionBegin; 13269566063dSJacob Faibussowitsch PetscCall(PetscNew(&ctx)); 13279566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 1328e10fd815SStefano Zampini ctx->dm = dm; 13299566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &n)); 13309566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &dms)); 13319566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 13329566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n, &ctx->subv, n, &ctx->vecs)); 1333e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1334e10fd815SStefano Zampini PetscInt nf; 1335e10fd815SStefano Zampini 13369566063dSJacob Faibussowitsch PetscCall(PetscViewerCreate(PetscObjectComm(odm), &ctx->subv[i])); 13379566063dSJacob Faibussowitsch PetscCall(PetscViewerSetType(ctx->subv[i], PETSCVIEWERGLVIS)); 133834e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisSetDM_Internal(ctx->subv[i], (PetscObject)dms[i])); 133934e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, NULL, NULL, NULL, NULL, NULL)); 1340e10fd815SStefano Zampini tnf += nf; 1341e10fd815SStefano Zampini } 13429566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 13439566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(tnf, &fecs, tnf, &sdim, tnf, &Ufds)); 1344e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1345e10fd815SStefano Zampini PetscInt *sd, nf, f; 1346e10fd815SStefano Zampini const char **fec; 1347e10fd815SStefano Zampini Vec *Uf; 1348e10fd815SStefano Zampini 134934e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, &fec, &sd, NULL, (PetscObject **)&Uf, NULL)); 1350e10fd815SStefano Zampini for (f = 0; f < nf; f++) { 13519566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(fec[f], &fecs[tnf + f])); 1352e10fd815SStefano Zampini Ufds[tnf + f] = Uf[f]; 1353e10fd815SStefano Zampini sdim[tnf + f] = sd[f]; 1354e10fd815SStefano Zampini } 1355e10fd815SStefano Zampini tnf += nf; 1356e10fd815SStefano Zampini } 13579566063dSJacob Faibussowitsch PetscCall(PetscViewerGLVisSetFields(viewer, tnf, (const char **)fecs, sdim, DMCompositeSampleGLVisFields_Private, (PetscObject *)Ufds, ctx, DestroyGLVisViewerCtx_Private)); 135848a46eb9SPierre Jolivet for (i = 0; i < tnf; i++) PetscCall(PetscFree(fecs[i])); 13599566063dSJacob Faibussowitsch PetscCall(PetscFree3(fecs, sdim, Ufds)); 13603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1361e10fd815SStefano Zampini } 1362e10fd815SStefano Zampini 136366976f2fSJacob Faibussowitsch static PetscErrorCode DMRefine_Composite(DM dmi, MPI_Comm comm, DM *fine) 1364d71ae5a4SJacob Faibussowitsch { 136547c6ae99SBarry Smith struct DMCompositeLink *next; 136647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmi->data; 136747c6ae99SBarry Smith DM dm; 136847c6ae99SBarry Smith 136947c6ae99SBarry Smith PetscFunctionBegin; 137047c6ae99SBarry Smith PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 137148a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 13729566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 137347c6ae99SBarry Smith next = com->next; 13749566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 137547c6ae99SBarry Smith 137615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 137747c6ae99SBarry Smith while (next) { 13789566063dSJacob Faibussowitsch PetscCall(DMRefine(next->dm, comm, &dm)); 13799566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 13809566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 138147c6ae99SBarry Smith next = next->next; 138247c6ae99SBarry Smith } 13833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138447c6ae99SBarry Smith } 138547c6ae99SBarry Smith 138666976f2fSJacob Faibussowitsch static PetscErrorCode DMCoarsen_Composite(DM dmi, MPI_Comm comm, DM *fine) 1387d71ae5a4SJacob Faibussowitsch { 138814354c39SJed Brown struct DMCompositeLink *next; 138914354c39SJed Brown DM_Composite *com = (DM_Composite *)dmi->data; 139014354c39SJed Brown DM dm; 139114354c39SJed Brown 139214354c39SJed Brown PetscFunctionBegin; 139314354c39SJed Brown PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 13949566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 139548a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 139614354c39SJed Brown next = com->next; 13979566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 139814354c39SJed Brown 139915229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 140014354c39SJed Brown while (next) { 14019566063dSJacob Faibussowitsch PetscCall(DMCoarsen(next->dm, comm, &dm)); 14029566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 14039566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 140414354c39SJed Brown next = next->next; 140514354c39SJed Brown } 14063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 140714354c39SJed Brown } 140847c6ae99SBarry Smith 140966976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateInterpolation_Composite(DM coarse, DM fine, Mat *A, Vec *v) 1410d71ae5a4SJacob Faibussowitsch { 14119ae5db72SJed Brown PetscInt m, n, M, N, nDM, i; 141247c6ae99SBarry Smith struct DMCompositeLink *nextc; 141347c6ae99SBarry Smith struct DMCompositeLink *nextf; 141425296bd5SBarry Smith Vec gcoarse, gfine, *vecs; 141547c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite *)coarse->data; 141647c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite *)fine->data; 14179ae5db72SJed Brown Mat *mats; 141847c6ae99SBarry Smith 141947c6ae99SBarry Smith PetscFunctionBegin; 142047c6ae99SBarry Smith PetscValidHeaderSpecific(coarse, DM_CLASSID, 1); 142147c6ae99SBarry Smith PetscValidHeaderSpecific(fine, DM_CLASSID, 2); 14229566063dSJacob Faibussowitsch PetscCall(DMSetUp(coarse)); 14239566063dSJacob Faibussowitsch PetscCall(DMSetUp(fine)); 142447c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14259566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(coarse, &gcoarse)); 14269566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(fine, &gfine)); 14279566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gcoarse, &n)); 14289566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gfine, &m)); 14299566063dSJacob Faibussowitsch PetscCall(VecGetSize(gcoarse, &N)); 14309566063dSJacob Faibussowitsch PetscCall(VecGetSize(gfine, &M)); 14319566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(coarse, &gcoarse)); 14329566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(fine, &gfine)); 143347c6ae99SBarry Smith 14349ae5db72SJed Brown nDM = comfine->nDM; 143563a3b9bcSJacob Faibussowitsch PetscCheck(nDM == comcoarse->nDM, PetscObjectComm((PetscObject)fine), PETSC_ERR_ARG_INCOMP, "Fine DMComposite has %" PetscInt_FMT " entries, but coarse has %" PetscInt_FMT, nDM, comcoarse->nDM); 14369566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nDM * nDM, &mats)); 143748a46eb9SPierre Jolivet if (v) PetscCall(PetscCalloc1(nDM, &vecs)); 143847c6ae99SBarry Smith 143915229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 14409ae5db72SJed Brown for (nextc = comcoarse->next, nextf = comfine->next, i = 0; nextc; nextc = nextc->next, nextf = nextf->next, i++) { 14411baa6e33SBarry Smith if (!v) PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], NULL)); 14421baa6e33SBarry Smith else PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], &vecs[i])); 144347c6ae99SBarry Smith } 14449566063dSJacob Faibussowitsch PetscCall(MatCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, nDM, NULL, mats, A)); 14451baa6e33SBarry Smith if (v) PetscCall(VecCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, vecs, v)); 14469566063dSJacob Faibussowitsch for (i = 0; i < nDM * nDM; i++) PetscCall(MatDestroy(&mats[i])); 14479566063dSJacob Faibussowitsch PetscCall(PetscFree(mats)); 144825296bd5SBarry Smith if (v) { 14499566063dSJacob Faibussowitsch for (i = 0; i < nDM; i++) PetscCall(VecDestroy(&vecs[i])); 14509566063dSJacob Faibussowitsch PetscCall(PetscFree(vecs)); 145125296bd5SBarry Smith } 14523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145347c6ae99SBarry Smith } 145447c6ae99SBarry Smith 1455d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 1456d71ae5a4SJacob Faibussowitsch { 14571411c6eeSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 14581411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1459f7efa3c7SJed Brown PetscInt i; 14601411c6eeSJed Brown 14611411c6eeSJed Brown PetscFunctionBegin; 14621411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 14639566063dSJacob Faibussowitsch PetscCall(DMCompositeGetISLocalToGlobalMappings(dm, <ogs)); 14649566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm), com->nDM, ltogs, &dm->ltogmap)); 14659566063dSJacob Faibussowitsch for (i = 0; i < com->nDM; i++) PetscCall(ISLocalToGlobalMappingDestroy(<ogs[i])); 14669566063dSJacob Faibussowitsch PetscCall(PetscFree(ltogs)); 14673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14681411c6eeSJed Brown } 14691411c6eeSJed Brown 147066976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateColoring_Composite(DM dm, ISColoringType ctype, ISColoring *coloring) 1471d71ae5a4SJacob Faibussowitsch { 147247c6ae99SBarry Smith PetscInt n, i, cnt; 147347c6ae99SBarry Smith ISColoringValue *colors; 147447c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 147547c6ae99SBarry Smith ISColoringValue maxcol = 0; 147647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 147747c6ae99SBarry Smith 147847c6ae99SBarry Smith PetscFunctionBegin; 147947c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 148008401ef6SPierre Jolivet PetscCheck(ctype != IS_COLORING_LOCAL, PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "Only global coloring supported"); 1481f7d195e4SLawrence Mitchell if (ctype == IS_COLORING_GLOBAL) { 148247c6ae99SBarry Smith n = com->n; 1483ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Unknown ISColoringType"); 14849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &colors)); /* freed in ISColoringDestroy() */ 148547c6ae99SBarry Smith 14869566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(((PetscObject)dm)->options, ((PetscObject)dm)->prefix, "-dmcomposite_dense_jacobian", &dense, NULL)); 148747c6ae99SBarry Smith if (dense) { 1488*6497c311SBarry Smith PetscCall(ISColoringValueCast(com->N, &maxcol)); 1489*6497c311SBarry Smith for (i = 0; i < n; i++) PetscCall(ISColoringValueCast(com->rstart + i, colors + i)); 149047c6ae99SBarry Smith } else { 149147c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 149247c6ae99SBarry Smith PetscMPIInt rank; 149347c6ae99SBarry Smith 14949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 149547c6ae99SBarry Smith cnt = 0; 149647c6ae99SBarry Smith while (next) { 149747c6ae99SBarry Smith ISColoring lcoloring; 149847c6ae99SBarry Smith 14999566063dSJacob Faibussowitsch PetscCall(DMCreateColoring(next->dm, IS_COLORING_GLOBAL, &lcoloring)); 1500*6497c311SBarry Smith for (i = 0; i < lcoloring->N; i++) PetscCall(ISColoringValueCast(maxcol + lcoloring->colors[i], colors + cnt++)); 150147c6ae99SBarry Smith maxcol += lcoloring->n; 15029566063dSJacob Faibussowitsch PetscCall(ISColoringDestroy(&lcoloring)); 150347c6ae99SBarry Smith next = next->next; 150447c6ae99SBarry Smith } 150547c6ae99SBarry Smith } 15069566063dSJacob Faibussowitsch PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)dm), maxcol, n, colors, PETSC_OWN_POINTER, coloring)); 15073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150847c6ae99SBarry Smith } 150947c6ae99SBarry Smith 151066976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1511d71ae5a4SJacob Faibussowitsch { 151247c6ae99SBarry Smith struct DMCompositeLink *next; 151347c6ae99SBarry Smith PetscScalar *garray, *larray; 151447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 151547c6ae99SBarry Smith 151647c6ae99SBarry Smith PetscFunctionBegin; 151747c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 151847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 151939d35262SVincent Le Chenadec 152048a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 152139d35262SVincent Le Chenadec 15229566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 15239566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 152447c6ae99SBarry Smith 152515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 152639d35262SVincent Le Chenadec next = com->next; 152747c6ae99SBarry Smith while (next) { 152847c6ae99SBarry Smith Vec local, global; 152947c6ae99SBarry Smith PetscInt N; 153047c6ae99SBarry Smith 15319566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15329566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(global, &N)); 15339566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15349566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15359566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15369566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, mode, local)); 15379566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, mode, local)); 15389566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15399566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15409566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15419566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 154239d35262SVincent Le Chenadec 154306ebdd98SJed Brown larray += next->nlocal; 154439d35262SVincent Le Chenadec garray += next->n; 154547c6ae99SBarry Smith next = next->next; 154647c6ae99SBarry Smith } 154747c6ae99SBarry Smith 15489566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 15499566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 15503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 155147c6ae99SBarry Smith } 155247c6ae99SBarry Smith 155366976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1554d71ae5a4SJacob Faibussowitsch { 15550c010503SBarry Smith PetscFunctionBegin; 155639d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 155739d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 155839d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 4); 15593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 156039d35262SVincent Le Chenadec } 156139d35262SVincent Le Chenadec 156266976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalBegin_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1563d71ae5a4SJacob Faibussowitsch { 156439d35262SVincent Le Chenadec struct DMCompositeLink *next; 156539d35262SVincent Le Chenadec PetscScalar *larray, *garray; 156639d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 156739d35262SVincent Le Chenadec 156839d35262SVincent Le Chenadec PetscFunctionBegin; 156939d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 157039d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 157139d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 157239d35262SVincent Le Chenadec 157348a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 157439d35262SVincent Le Chenadec 15759566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 15769566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 157739d35262SVincent Le Chenadec 157815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 157939d35262SVincent Le Chenadec next = com->next; 158039d35262SVincent Le Chenadec while (next) { 158139d35262SVincent Le Chenadec Vec global, local; 158239d35262SVincent Le Chenadec 15839566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15849566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15859566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15869566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15879566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, mode, global)); 15889566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, mode, global)); 15899566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15909566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15919566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15929566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 159339d35262SVincent Le Chenadec 159439d35262SVincent Le Chenadec garray += next->n; 159539d35262SVincent Le Chenadec larray += next->nlocal; 159639d35262SVincent Le Chenadec next = next->next; 159739d35262SVincent Le Chenadec } 159839d35262SVincent Le Chenadec 15999566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 16009566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 16013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 160239d35262SVincent Le Chenadec } 160339d35262SVincent Le Chenadec 160466976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1605d71ae5a4SJacob Faibussowitsch { 160639d35262SVincent Le Chenadec PetscFunctionBegin; 160739d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 160839d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 160939d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161139d35262SVincent Le Chenadec } 161239d35262SVincent Le Chenadec 161366976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalBegin_Composite(DM dm, Vec vec1, InsertMode mode, Vec vec2) 1614d71ae5a4SJacob Faibussowitsch { 161539d35262SVincent Le Chenadec struct DMCompositeLink *next; 161639d35262SVincent Le Chenadec PetscScalar *array1, *array2; 161739d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 161839d35262SVincent Le Chenadec 161939d35262SVincent Le Chenadec PetscFunctionBegin; 162039d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 162139d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec1, VEC_CLASSID, 2); 162239d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec2, VEC_CLASSID, 4); 162339d35262SVincent Le Chenadec 162448a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 162539d35262SVincent Le Chenadec 16269566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec1, &array1)); 16279566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec2, &array2)); 162839d35262SVincent Le Chenadec 162915229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 163039d35262SVincent Le Chenadec next = com->next; 163139d35262SVincent Le Chenadec while (next) { 163239d35262SVincent Le Chenadec Vec local1, local2; 163339d35262SVincent Le Chenadec 16349566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local1)); 16359566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local1, array1)); 16369566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local2)); 16379566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local2, array2)); 16389566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalBegin(next->dm, local1, mode, local2)); 16399566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalEnd(next->dm, local1, mode, local2)); 16409566063dSJacob Faibussowitsch PetscCall(VecResetArray(local2)); 16419566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local2)); 16429566063dSJacob Faibussowitsch PetscCall(VecResetArray(local1)); 16439566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local1)); 164439d35262SVincent Le Chenadec 164539d35262SVincent Le Chenadec array1 += next->nlocal; 164639d35262SVincent Le Chenadec array2 += next->nlocal; 164739d35262SVincent Le Chenadec next = next->next; 164839d35262SVincent Le Chenadec } 164939d35262SVincent Le Chenadec 16509566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec1, NULL)); 16519566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec2, NULL)); 16523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 165339d35262SVincent Le Chenadec } 165439d35262SVincent Le Chenadec 165566976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1656d71ae5a4SJacob Faibussowitsch { 165739d35262SVincent Le Chenadec PetscFunctionBegin; 165839d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 165939d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 166039d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16620c010503SBarry Smith } 166347c6ae99SBarry Smith 16646ae3a549SBarry Smith /*MC 1665dce8aebaSBarry Smith DMCOMPOSITE = "composite" - A `DM` object that is used to manage data for a collection of `DM` 16666ae3a549SBarry Smith 16676ae3a549SBarry Smith Level: intermediate 16686ae3a549SBarry Smith 1669db781477SPatrick Sanan .seealso: `DMType`, `DM`, `DMDACreate()`, `DMCreate()`, `DMSetType()`, `DMCompositeCreate()` 16706ae3a549SBarry Smith M*/ 16716ae3a549SBarry Smith 1672d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1673d71ae5a4SJacob Faibussowitsch { 1674a4121054SBarry Smith DM_Composite *com; 1675a4121054SBarry Smith 1676a4121054SBarry Smith PetscFunctionBegin; 16774dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&com)); 1678a4121054SBarry Smith p->data = com; 1679a4121054SBarry Smith com->n = 0; 16807ac2b803SAlex Fikl com->nghost = 0; 16810298fd71SBarry Smith com->next = NULL; 1682a4121054SBarry Smith com->nDM = 0; 1683a4121054SBarry Smith 1684a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1685a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1686184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 16874d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 168816621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1689a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 169014354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 169125296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 169225296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1693e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1694a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1695a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 169639d35262SVincent Le Chenadec p->ops->localtoglobalbegin = DMLocalToGlobalBegin_Composite; 169739d35262SVincent Le Chenadec p->ops->localtoglobalend = DMLocalToGlobalEnd_Composite; 169839d35262SVincent Le Chenadec p->ops->localtolocalbegin = DMLocalToLocalBegin_Composite; 169939d35262SVincent Le Chenadec p->ops->localtolocalend = DMLocalToLocalEnd_Composite; 1700a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1701a4121054SBarry Smith p->ops->view = DMView_Composite; 1702a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1703e10fd815SStefano Zampini 17049566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)p, "DMSetUpGLVisViewer_C", DMSetUpGLVisViewer_Composite)); 17053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1706a4121054SBarry Smith } 1707a4121054SBarry Smith 17081fd49c25SBarry Smith /*@ 1709dce8aebaSBarry Smith DMCompositeCreate - Creates a `DMCOMPOSITE`, used to generate "composite" 17100c010503SBarry Smith vectors made up of several subvectors. 17110c010503SBarry Smith 1712d083f849SBarry Smith Collective 171347c6ae99SBarry Smith 171447c6ae99SBarry Smith Input Parameter: 17150c010503SBarry Smith . comm - the processors that will share the global vector 17160c010503SBarry Smith 17172fe279fdSBarry Smith Output Parameter: 1718dce8aebaSBarry Smith . packer - the `DMCOMPOSITE` object 171947c6ae99SBarry Smith 172047c6ae99SBarry Smith Level: advanced 172147c6ae99SBarry Smith 172260225df5SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCompositeScatter()`, `DMCreate()` 1723db781477SPatrick Sanan `DMCompositeGather()`, `DMCreateGlobalVector()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()` 1724db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 172547c6ae99SBarry Smith @*/ 1726d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeCreate(MPI_Comm comm, DM *packer) 1727d71ae5a4SJacob Faibussowitsch { 172847c6ae99SBarry Smith PetscFunctionBegin; 17294f572ea9SToby Isaac PetscAssertPointer(packer, 2); 17309566063dSJacob Faibussowitsch PetscCall(DMCreate(comm, packer)); 17319566063dSJacob Faibussowitsch PetscCall(DMSetType(*packer, DMCOMPOSITE)); 17323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 173347c6ae99SBarry Smith } 1734