xref: /petsc/src/dm/impls/composite/pack.c (revision 907376e66e56134b42a3e3ff22609655dbbb89d0)
147c6ae99SBarry Smith 
2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h>       /*I  "petscdmcomposite.h"  I*/
301e13f73SMatthew G. Knepley #include <petsc-private/isimpl.h>
42764a2aaSMatthew G. Knepley #include <petscds.h>
547c6ae99SBarry Smith 
647c6ae99SBarry Smith #undef __FUNCT__
747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling"
847c6ae99SBarry Smith /*@C
947c6ae99SBarry Smith     DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the
109ae5db72SJed Brown       seperate components (DMs) in a DMto build the correct matrix nonzero structure.
1147c6ae99SBarry Smith 
1247c6ae99SBarry Smith 
1347c6ae99SBarry Smith     Logically Collective on MPI_Comm
1447c6ae99SBarry Smith 
1547c6ae99SBarry Smith     Input Parameter:
1647c6ae99SBarry Smith +   dm - the composite object
1747c6ae99SBarry Smith -   formcouplelocations - routine to set the nonzero locations in the matrix
1847c6ae99SBarry Smith 
1947c6ae99SBarry Smith     Level: advanced
2047c6ae99SBarry Smith 
211b2093e4SBarry Smith     Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into
2247c6ae99SBarry Smith         this routine
2347c6ae99SBarry Smith 
2447c6ae99SBarry Smith @*/
257087cfbeSBarry Smith PetscErrorCode  DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt))
2647c6ae99SBarry Smith {
2747c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
2847c6ae99SBarry Smith 
2947c6ae99SBarry Smith   PetscFunctionBegin;
3047c6ae99SBarry Smith   com->FormCoupleLocations = FormCoupleLocations;
3147c6ae99SBarry Smith   PetscFunctionReturn(0);
3247c6ae99SBarry Smith }
3347c6ae99SBarry Smith 
3447c6ae99SBarry Smith #undef __FUNCT__
350c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite"
366bf464f9SBarry Smith PetscErrorCode  DMDestroy_Composite(DM dm)
3747c6ae99SBarry Smith {
3847c6ae99SBarry Smith   PetscErrorCode         ierr;
3947c6ae99SBarry Smith   struct DMCompositeLink *next, *prev;
4047c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
4147c6ae99SBarry Smith 
4247c6ae99SBarry Smith   PetscFunctionBegin;
4347c6ae99SBarry Smith   next = com->next;
4447c6ae99SBarry Smith   while (next) {
4547c6ae99SBarry Smith     prev = next;
4647c6ae99SBarry Smith     next = next->next;
47fcfd50ebSBarry Smith     ierr = DMDestroy(&prev->dm);CHKERRQ(ierr);
4847c6ae99SBarry Smith     ierr = PetscFree(prev->grstarts);CHKERRQ(ierr);
4947c6ae99SBarry Smith     ierr = PetscFree(prev);CHKERRQ(ierr);
5047c6ae99SBarry Smith   }
51435a35e8SMatthew G Knepley   /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */
52435a35e8SMatthew G Knepley   ierr = PetscFree(com);CHKERRQ(ierr);
5347c6ae99SBarry Smith   PetscFunctionReturn(0);
5447c6ae99SBarry Smith }
5547c6ae99SBarry Smith 
5647c6ae99SBarry Smith #undef __FUNCT__
570c010503SBarry Smith #define __FUNCT__ "DMView_Composite"
587087cfbeSBarry Smith PetscErrorCode  DMView_Composite(DM dm,PetscViewer v)
5947c6ae99SBarry Smith {
6047c6ae99SBarry Smith   PetscErrorCode ierr;
6147c6ae99SBarry Smith   PetscBool      iascii;
6247c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
6347c6ae99SBarry Smith 
6447c6ae99SBarry Smith   PetscFunctionBegin;
65251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
6647c6ae99SBarry Smith   if (iascii) {
6747c6ae99SBarry Smith     struct DMCompositeLink *lnk = com->next;
6847c6ae99SBarry Smith     PetscInt               i;
6947c6ae99SBarry Smith 
7047c6ae99SBarry Smith     ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr);
719ae5db72SJed Brown     ierr = PetscViewerASCIIPrintf(v,"  contains %D DMs\n",com->nDM);CHKERRQ(ierr);
7247c6ae99SBarry Smith     ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
7347c6ae99SBarry Smith     for (i=0; lnk; lnk=lnk->next,i++) {
749ae5db72SJed Brown       ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr);
7547c6ae99SBarry Smith       ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
7647c6ae99SBarry Smith       ierr = DMView(lnk->dm,v);CHKERRQ(ierr);
7747c6ae99SBarry Smith       ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
7847c6ae99SBarry Smith     }
7947c6ae99SBarry Smith     ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
8047c6ae99SBarry Smith   }
8147c6ae99SBarry Smith   PetscFunctionReturn(0);
8247c6ae99SBarry Smith }
8347c6ae99SBarry Smith 
8447c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/
8547c6ae99SBarry Smith #undef __FUNCT__
86d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite"
877087cfbeSBarry Smith PetscErrorCode  DMSetUp_Composite(DM dm)
8847c6ae99SBarry Smith {
8947c6ae99SBarry Smith   PetscErrorCode         ierr;
9047c6ae99SBarry Smith   PetscInt               nprev = 0;
9147c6ae99SBarry Smith   PetscMPIInt            rank,size;
9247c6ae99SBarry Smith   DM_Composite           *com  = (DM_Composite*)dm->data;
9347c6ae99SBarry Smith   struct DMCompositeLink *next = com->next;
9447c6ae99SBarry Smith   PetscLayout            map;
9547c6ae99SBarry Smith 
9647c6ae99SBarry Smith   PetscFunctionBegin;
97ce94432eSBarry Smith   if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup");
98ce94432eSBarry Smith   ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr);
9947c6ae99SBarry Smith   ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr);
10047c6ae99SBarry Smith   ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr);
10147c6ae99SBarry Smith   ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr);
10247c6ae99SBarry Smith   ierr = PetscLayoutSetUp(map);CHKERRQ(ierr);
10347c6ae99SBarry Smith   ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr);
1040298fd71SBarry Smith   ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr);
105fcfd50ebSBarry Smith   ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr);
10647c6ae99SBarry Smith 
1079ae5db72SJed Brown   /* now set the rstart for each linked vector */
108ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
109ce94432eSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr);
11047c6ae99SBarry Smith   while (next) {
11147c6ae99SBarry Smith     next->rstart  = nprev;
11206ebdd98SJed Brown     nprev        += next->n;
11347c6ae99SBarry Smith     next->grstart = com->rstart + next->rstart;
114785e854fSJed Brown     ierr          = PetscMalloc1(size,&next->grstarts);CHKERRQ(ierr);
115ce94432eSBarry Smith     ierr          = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr);
11647c6ae99SBarry Smith     next          = next->next;
11747c6ae99SBarry Smith   }
11847c6ae99SBarry Smith   com->setup = PETSC_TRUE;
11947c6ae99SBarry Smith   PetscFunctionReturn(0);
12047c6ae99SBarry Smith }
12147c6ae99SBarry Smith 
12247c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/
12347c6ae99SBarry Smith 
12447c6ae99SBarry Smith #undef __FUNCT__
12547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM"
12673e31fe2SJed Brown /*@
12747c6ae99SBarry Smith     DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite
12847c6ae99SBarry Smith        representation.
12947c6ae99SBarry Smith 
13047c6ae99SBarry Smith     Not Collective
13147c6ae99SBarry Smith 
13247c6ae99SBarry Smith     Input Parameter:
13347c6ae99SBarry Smith .    dm - the packer object
13447c6ae99SBarry Smith 
13547c6ae99SBarry Smith     Output Parameter:
13647c6ae99SBarry Smith .     nDM - the number of DMs
13747c6ae99SBarry Smith 
13847c6ae99SBarry Smith     Level: beginner
13947c6ae99SBarry Smith 
14047c6ae99SBarry Smith @*/
1417087cfbeSBarry Smith PetscErrorCode  DMCompositeGetNumberDM(DM dm,PetscInt *nDM)
14247c6ae99SBarry Smith {
14347c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
1445fd66863SKarl Rupp 
14547c6ae99SBarry Smith   PetscFunctionBegin;
14647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
14747c6ae99SBarry Smith   *nDM = com->nDM;
14847c6ae99SBarry Smith   PetscFunctionReturn(0);
14947c6ae99SBarry Smith }
15047c6ae99SBarry Smith 
15147c6ae99SBarry Smith 
15247c6ae99SBarry Smith #undef __FUNCT__
15347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess"
15447c6ae99SBarry Smith /*@C
15547c6ae99SBarry Smith     DMCompositeGetAccess - Allows one to access the individual packed vectors in their global
15647c6ae99SBarry Smith        representation.
15747c6ae99SBarry Smith 
15847c6ae99SBarry Smith     Collective on DMComposite
15947c6ae99SBarry Smith 
1609ae5db72SJed Brown     Input Parameters:
16147c6ae99SBarry Smith +    dm - the packer object
1629ae5db72SJed Brown -    gvec - the global vector
1639ae5db72SJed Brown 
1649ae5db72SJed Brown     Output Parameters:
1650298fd71SBarry Smith .    Vec* ... - the packed parallel vectors, NULL for those that are not needed
16647c6ae99SBarry Smith 
16747c6ae99SBarry Smith     Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them
16847c6ae99SBarry Smith 
169f73e5cebSJed Brown     Fortran Notes:
170f73e5cebSJed Brown 
171f73e5cebSJed Brown     Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4)
172f73e5cebSJed Brown     or use the alternative interface DMCompositeGetAccessArray().
173f73e5cebSJed Brown 
17447c6ae99SBarry Smith     Level: advanced
17547c6ae99SBarry Smith 
176f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter()
17747c6ae99SBarry Smith @*/
1787087cfbeSBarry Smith PetscErrorCode  DMCompositeGetAccess(DM dm,Vec gvec,...)
17947c6ae99SBarry Smith {
18047c6ae99SBarry Smith   va_list                Argp;
18147c6ae99SBarry Smith   PetscErrorCode         ierr;
18247c6ae99SBarry Smith   struct DMCompositeLink *next;
18347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
18447c6ae99SBarry Smith 
18547c6ae99SBarry Smith   PetscFunctionBegin;
18647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
18747c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
18847c6ae99SBarry Smith   next = com->next;
18947c6ae99SBarry Smith   if (!com->setup) {
190d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
19147c6ae99SBarry Smith   }
19247c6ae99SBarry Smith 
19347c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
19447c6ae99SBarry Smith   va_start(Argp,gvec);
19547c6ae99SBarry Smith   while (next) {
19647c6ae99SBarry Smith     Vec *vec;
19747c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
1989ae5db72SJed Brown     if (vec) {
1999ae5db72SJed Brown       PetscScalar *array;
2009ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr);
2019ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
2029ae5db72SJed Brown       ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr);
2039ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
20447c6ae99SBarry Smith     }
20547c6ae99SBarry Smith     next = next->next;
20647c6ae99SBarry Smith   }
20747c6ae99SBarry Smith   va_end(Argp);
20847c6ae99SBarry Smith   PetscFunctionReturn(0);
20947c6ae99SBarry Smith }
21047c6ae99SBarry Smith 
21147c6ae99SBarry Smith #undef __FUNCT__
212f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray"
213f73e5cebSJed Brown /*@C
214f73e5cebSJed Brown     DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global
215f73e5cebSJed Brown        representation.
216f73e5cebSJed Brown 
217f73e5cebSJed Brown     Collective on DMComposite
218f73e5cebSJed Brown 
219f73e5cebSJed Brown     Input Parameters:
220f73e5cebSJed Brown +    dm - the packer object
221f73e5cebSJed Brown .    pvec - packed vector
222f73e5cebSJed Brown .    nwanted - number of vectors wanted
2230298fd71SBarry Smith -    wanted - sorted array of vectors wanted, or NULL to get all vectors
224f73e5cebSJed Brown 
225f73e5cebSJed Brown     Output Parameters:
226f73e5cebSJed Brown .    vecs - array of requested global vectors (must be allocated)
227f73e5cebSJed Brown 
228f73e5cebSJed Brown     Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them
229f73e5cebSJed Brown 
230f73e5cebSJed Brown     Level: advanced
231f73e5cebSJed Brown 
232f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather()
233f73e5cebSJed Brown @*/
234f73e5cebSJed Brown PetscErrorCode  DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs)
235f73e5cebSJed Brown {
236f73e5cebSJed Brown   PetscErrorCode         ierr;
237f73e5cebSJed Brown   struct DMCompositeLink *link;
238f73e5cebSJed Brown   PetscInt               i,wnum;
239f73e5cebSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
240f73e5cebSJed Brown 
241f73e5cebSJed Brown   PetscFunctionBegin;
242f73e5cebSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
243f73e5cebSJed Brown   PetscValidHeaderSpecific(pvec,VEC_CLASSID,2);
244f73e5cebSJed Brown   if (!com->setup) {
245f73e5cebSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
246f73e5cebSJed Brown   }
247f73e5cebSJed Brown 
248f73e5cebSJed Brown   for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) {
249f73e5cebSJed Brown     if (!wanted || i == wanted[wnum]) {
250f73e5cebSJed Brown       PetscScalar *array;
251f73e5cebSJed Brown       Vec v;
252f73e5cebSJed Brown       ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr);
253f73e5cebSJed Brown       ierr = VecGetArray(pvec,&array);CHKERRQ(ierr);
254f73e5cebSJed Brown       ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr);
255f73e5cebSJed Brown       ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr);
256f73e5cebSJed Brown       vecs[wnum++] = v;
257f73e5cebSJed Brown     }
258f73e5cebSJed Brown   }
259f73e5cebSJed Brown   PetscFunctionReturn(0);
260f73e5cebSJed Brown }
261f73e5cebSJed Brown 
262f73e5cebSJed Brown #undef __FUNCT__
26347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess"
26447c6ae99SBarry Smith /*@C
265aa219208SBarry Smith     DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess()
26647c6ae99SBarry Smith        representation.
26747c6ae99SBarry Smith 
26847c6ae99SBarry Smith     Collective on DMComposite
26947c6ae99SBarry Smith 
2709ae5db72SJed Brown     Input Parameters:
27147c6ae99SBarry Smith +    dm - the packer object
27247c6ae99SBarry Smith .    gvec - the global vector
2730298fd71SBarry Smith -    Vec* ... - the individual parallel vectors, NULL for those that are not needed
27447c6ae99SBarry Smith 
27547c6ae99SBarry Smith     Level: advanced
27647c6ae99SBarry Smith 
2779ae5db72SJed Brown .seealso  DMCompositeAddDM(), DMCreateGlobalVector(),
2786eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(),
279aa219208SBarry Smith          DMCompositeRestoreAccess(), DMCompositeGetAccess()
28047c6ae99SBarry Smith 
28147c6ae99SBarry Smith @*/
2827087cfbeSBarry Smith PetscErrorCode  DMCompositeRestoreAccess(DM dm,Vec gvec,...)
28347c6ae99SBarry Smith {
28447c6ae99SBarry Smith   va_list                Argp;
28547c6ae99SBarry Smith   PetscErrorCode         ierr;
28647c6ae99SBarry Smith   struct DMCompositeLink *next;
28747c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
28847c6ae99SBarry Smith 
28947c6ae99SBarry Smith   PetscFunctionBegin;
29047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
29147c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
29247c6ae99SBarry Smith   next = com->next;
29347c6ae99SBarry Smith   if (!com->setup) {
294d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
29547c6ae99SBarry Smith   }
29647c6ae99SBarry Smith 
29747c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
29847c6ae99SBarry Smith   va_start(Argp,gvec);
29947c6ae99SBarry Smith   while (next) {
30047c6ae99SBarry Smith     Vec *vec;
30147c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
3029ae5db72SJed Brown     if (vec) {
3039ae5db72SJed Brown       ierr = VecResetArray(*vec);CHKERRQ(ierr);
3049ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr);
30547c6ae99SBarry Smith     }
30647c6ae99SBarry Smith     next = next->next;
30747c6ae99SBarry Smith   }
30847c6ae99SBarry Smith   va_end(Argp);
30947c6ae99SBarry Smith   PetscFunctionReturn(0);
31047c6ae99SBarry Smith }
31147c6ae99SBarry Smith 
31247c6ae99SBarry Smith #undef __FUNCT__
313f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray"
314f73e5cebSJed Brown /*@C
315f73e5cebSJed Brown     DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray()
316f73e5cebSJed Brown 
317f73e5cebSJed Brown     Collective on DMComposite
318f73e5cebSJed Brown 
319f73e5cebSJed Brown     Input Parameters:
320f73e5cebSJed Brown +    dm - the packer object
321f73e5cebSJed Brown .    pvec - packed vector
322f73e5cebSJed Brown .    nwanted - number of vectors wanted
3230298fd71SBarry Smith .    wanted - sorted array of vectors wanted, or NULL to get all vectors
324f73e5cebSJed Brown -    vecs - array of global vectors to return
325f73e5cebSJed Brown 
326f73e5cebSJed Brown     Level: advanced
327f73e5cebSJed Brown 
328f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather()
329f73e5cebSJed Brown @*/
330f73e5cebSJed Brown PetscErrorCode  DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs)
331f73e5cebSJed Brown {
332f73e5cebSJed Brown   PetscErrorCode         ierr;
333f73e5cebSJed Brown   struct DMCompositeLink *link;
334f73e5cebSJed Brown   PetscInt               i,wnum;
335f73e5cebSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
336f73e5cebSJed Brown 
337f73e5cebSJed Brown   PetscFunctionBegin;
338f73e5cebSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
339f73e5cebSJed Brown   PetscValidHeaderSpecific(pvec,VEC_CLASSID,2);
340f73e5cebSJed Brown   if (!com->setup) {
341f73e5cebSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
342f73e5cebSJed Brown   }
343f73e5cebSJed Brown 
344f73e5cebSJed Brown   for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) {
345f73e5cebSJed Brown     if (!wanted || i == wanted[wnum]) {
346f73e5cebSJed Brown       ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr);
347f73e5cebSJed Brown       ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr);
348f73e5cebSJed Brown       wnum++;
349f73e5cebSJed Brown     }
350f73e5cebSJed Brown   }
351f73e5cebSJed Brown   PetscFunctionReturn(0);
352f73e5cebSJed Brown }
353f73e5cebSJed Brown 
354f73e5cebSJed Brown #undef __FUNCT__
35547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter"
35647c6ae99SBarry Smith /*@C
35747c6ae99SBarry Smith     DMCompositeScatter - Scatters from a global packed vector into its individual local vectors
35847c6ae99SBarry Smith 
35947c6ae99SBarry Smith     Collective on DMComposite
36047c6ae99SBarry Smith 
3619ae5db72SJed Brown     Input Parameters:
36247c6ae99SBarry Smith +    dm - the packer object
36347c6ae99SBarry Smith .    gvec - the global vector
3640298fd71SBarry Smith -    Vec ... - the individual sequential vectors, NULL for those that are not needed
36547c6ae99SBarry Smith 
36647c6ae99SBarry Smith     Level: advanced
36747c6ae99SBarry Smith 
3686f3c3dcfSJed Brown     Notes:
3696f3c3dcfSJed Brown     DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is
3706f3c3dcfSJed Brown     accessible from Fortran.
3716f3c3dcfSJed Brown 
3729ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
3736eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
37447c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
3756f3c3dcfSJed Brown          DMCompositeScatterArray()
37647c6ae99SBarry Smith 
37747c6ae99SBarry Smith @*/
3787087cfbeSBarry Smith PetscErrorCode  DMCompositeScatter(DM dm,Vec gvec,...)
37947c6ae99SBarry Smith {
38047c6ae99SBarry Smith   va_list                Argp;
38147c6ae99SBarry Smith   PetscErrorCode         ierr;
38247c6ae99SBarry Smith   struct DMCompositeLink *next;
3838fd8f222SJed Brown   PetscInt               cnt;
38447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
38547c6ae99SBarry Smith 
38647c6ae99SBarry Smith   PetscFunctionBegin;
38747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
38847c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
38947c6ae99SBarry Smith   if (!com->setup) {
390d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
39147c6ae99SBarry Smith   }
39247c6ae99SBarry Smith 
39347c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
39447c6ae99SBarry Smith   va_start(Argp,gvec);
3958fd8f222SJed Brown   for (cnt=3,next=com->next; next; cnt++,next=next->next) {
3969ae5db72SJed Brown     Vec local;
3979ae5db72SJed Brown     local = va_arg(Argp, Vec);
3989ae5db72SJed Brown     if (local) {
3999ae5db72SJed Brown       Vec         global;
40047c6ae99SBarry Smith       PetscScalar *array;
4019ae5db72SJed Brown       PetscValidHeaderSpecific(local,VEC_CLASSID,cnt);
4029ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
4039ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
4049ae5db72SJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
4059ae5db72SJed Brown       ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
4069ae5db72SJed Brown       ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
4079ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
4089ae5db72SJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
4099ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
41047c6ae99SBarry Smith     }
41147c6ae99SBarry Smith   }
41247c6ae99SBarry Smith   va_end(Argp);
41347c6ae99SBarry Smith   PetscFunctionReturn(0);
41447c6ae99SBarry Smith }
41547c6ae99SBarry Smith 
41647c6ae99SBarry Smith #undef __FUNCT__
4176f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray"
4186f3c3dcfSJed Brown /*@
4196f3c3dcfSJed Brown     DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors
4206f3c3dcfSJed Brown 
4216f3c3dcfSJed Brown     Collective on DMComposite
4226f3c3dcfSJed Brown 
4236f3c3dcfSJed Brown     Input Parameters:
4246f3c3dcfSJed Brown +    dm - the packer object
4256f3c3dcfSJed Brown .    gvec - the global vector
4266f3c3dcfSJed Brown .    lvecs - array of local vectors, NULL for any that are not needed
4276f3c3dcfSJed Brown 
4286f3c3dcfSJed Brown     Level: advanced
4296f3c3dcfSJed Brown 
4306f3c3dcfSJed Brown     Note:
431*907376e6SBarry Smith     This is a non-variadic alternative to DMCompositeScatter()
4326f3c3dcfSJed Brown 
4336f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector()
4346f3c3dcfSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
4356f3c3dcfSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
4366f3c3dcfSJed Brown 
4376f3c3dcfSJed Brown @*/
4386f3c3dcfSJed Brown PetscErrorCode  DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs)
4396f3c3dcfSJed Brown {
4406f3c3dcfSJed Brown   PetscErrorCode         ierr;
4416f3c3dcfSJed Brown   struct DMCompositeLink *next;
4426f3c3dcfSJed Brown   PetscInt               i;
4436f3c3dcfSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
4446f3c3dcfSJed Brown 
4456f3c3dcfSJed Brown   PetscFunctionBegin;
4466f3c3dcfSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
4476f3c3dcfSJed Brown   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
4486f3c3dcfSJed Brown   if (!com->setup) {
4496f3c3dcfSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
4506f3c3dcfSJed Brown   }
4516f3c3dcfSJed Brown 
4526f3c3dcfSJed Brown   /* loop over packed objects, handling one at at time */
4536f3c3dcfSJed Brown   for (i=0,next=com->next; next; next=next->next,i++) {
4546f3c3dcfSJed Brown     if (lvecs[i]) {
4556f3c3dcfSJed Brown       Vec         global;
4566f3c3dcfSJed Brown       PetscScalar *array;
4576f3c3dcfSJed Brown       PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3);
4586f3c3dcfSJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
4596f3c3dcfSJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
4606f3c3dcfSJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
4616f3c3dcfSJed Brown       ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr);
4626f3c3dcfSJed Brown       ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr);
4636f3c3dcfSJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
4646f3c3dcfSJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
4656f3c3dcfSJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
4666f3c3dcfSJed Brown     }
4676f3c3dcfSJed Brown   }
4686f3c3dcfSJed Brown   PetscFunctionReturn(0);
4696f3c3dcfSJed Brown }
4706f3c3dcfSJed Brown 
4716f3c3dcfSJed Brown #undef __FUNCT__
47247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather"
47347c6ae99SBarry Smith /*@C
47447c6ae99SBarry Smith     DMCompositeGather - Gathers into a global packed vector from its individual local vectors
47547c6ae99SBarry Smith 
47647c6ae99SBarry Smith     Collective on DMComposite
47747c6ae99SBarry Smith 
47847c6ae99SBarry Smith     Input Parameter:
47947c6ae99SBarry Smith +    dm - the packer object
48047c6ae99SBarry Smith .    gvec - the global vector
481*907376e6SBarry Smith .    imode - INSERT_VALUES or ADD_VALUES
4820298fd71SBarry Smith -    Vec ... - the individual sequential vectors, NULL for any that are not needed
48347c6ae99SBarry Smith 
48447c6ae99SBarry Smith     Level: advanced
48547c6ae99SBarry Smith 
4869ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
4876eb61c8cSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
48847c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
48947c6ae99SBarry Smith 
49047c6ae99SBarry Smith @*/
4917087cfbeSBarry Smith PetscErrorCode  DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...)
49247c6ae99SBarry Smith {
49347c6ae99SBarry Smith   va_list                Argp;
49447c6ae99SBarry Smith   PetscErrorCode         ierr;
49547c6ae99SBarry Smith   struct DMCompositeLink *next;
49647c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
4978fd8f222SJed Brown   PetscInt               cnt;
49847c6ae99SBarry Smith 
49947c6ae99SBarry Smith   PetscFunctionBegin;
50047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
50147c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
50247c6ae99SBarry Smith   if (!com->setup) {
503d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
50447c6ae99SBarry Smith   }
50547c6ae99SBarry Smith 
50647c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
507df0c820aSJed Brown   va_start(Argp,imode);
5088fd8f222SJed Brown   for (cnt=3,next=com->next; next; cnt++,next=next->next) {
5099ae5db72SJed Brown     Vec local;
5109ae5db72SJed Brown     local = va_arg(Argp, Vec);
5119ae5db72SJed Brown     if (local) {
51247c6ae99SBarry Smith       PetscScalar *array;
5139ae5db72SJed Brown       Vec         global;
5149ae5db72SJed Brown       PetscValidHeaderSpecific(local,VEC_CLASSID,cnt);
5159ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
5169ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
5179ae5db72SJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
5189ae5db72SJed Brown       ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr);
5199ae5db72SJed Brown       ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr);
5209ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
5219ae5db72SJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
5229ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
52347c6ae99SBarry Smith     }
52447c6ae99SBarry Smith   }
52547c6ae99SBarry Smith   va_end(Argp);
52647c6ae99SBarry Smith   PetscFunctionReturn(0);
52747c6ae99SBarry Smith }
52847c6ae99SBarry Smith 
52947c6ae99SBarry Smith #undef __FUNCT__
5306f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray"
5316f3c3dcfSJed Brown /*@
5326f3c3dcfSJed Brown     DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors
5336f3c3dcfSJed Brown 
5346f3c3dcfSJed Brown     Collective on DMComposite
5356f3c3dcfSJed Brown 
5366f3c3dcfSJed Brown     Input Parameter:
5376f3c3dcfSJed Brown +    dm - the packer object
5386f3c3dcfSJed Brown .    gvec - the global vector
539*907376e6SBarry Smith .    imode - INSERT_VALUES or ADD_VALUES
5406f3c3dcfSJed Brown -    lvecs - the individual sequential vectors, NULL for any that are not needed
5416f3c3dcfSJed Brown 
5426f3c3dcfSJed Brown     Level: advanced
5436f3c3dcfSJed Brown 
5446f3c3dcfSJed Brown     Notes:
5456f3c3dcfSJed Brown     This is a non-variadic alternative to DMCompositeGather().
5466f3c3dcfSJed Brown 
5476f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
5486f3c3dcfSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
5496f3c3dcfSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(),
5506f3c3dcfSJed Brown @*/
5516f3c3dcfSJed Brown PetscErrorCode  DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs)
5526f3c3dcfSJed Brown {
5536f3c3dcfSJed Brown   PetscErrorCode         ierr;
5546f3c3dcfSJed Brown   struct DMCompositeLink *next;
5556f3c3dcfSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
5566f3c3dcfSJed Brown   PetscInt               i;
5576f3c3dcfSJed Brown 
5586f3c3dcfSJed Brown   PetscFunctionBegin;
5596f3c3dcfSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
5606f3c3dcfSJed Brown   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
5616f3c3dcfSJed Brown   if (!com->setup) {
5626f3c3dcfSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
5636f3c3dcfSJed Brown   }
5646f3c3dcfSJed Brown 
5656f3c3dcfSJed Brown   /* loop over packed objects, handling one at at time */
5666f3c3dcfSJed Brown   for (next=com->next,i=0; next; next=next->next,i++) {
5676f3c3dcfSJed Brown     if (lvecs[i]) {
5686f3c3dcfSJed Brown       PetscScalar *array;
5696f3c3dcfSJed Brown       Vec         global;
5706f3c3dcfSJed Brown       PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3);
5716f3c3dcfSJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
5726f3c3dcfSJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
5736f3c3dcfSJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
5746f3c3dcfSJed Brown       ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr);
5756f3c3dcfSJed Brown       ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr);
5766f3c3dcfSJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
5776f3c3dcfSJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
5786f3c3dcfSJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
5796f3c3dcfSJed Brown     }
5806f3c3dcfSJed Brown   }
5816f3c3dcfSJed Brown   PetscFunctionReturn(0);
5826f3c3dcfSJed Brown }
5836f3c3dcfSJed Brown 
5846f3c3dcfSJed Brown #undef __FUNCT__
58547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM"
58647c6ae99SBarry Smith /*@C
587aa219208SBarry Smith     DMCompositeAddDM - adds a DM  vector to a DMComposite
58847c6ae99SBarry Smith 
58947c6ae99SBarry Smith     Collective on DMComposite
59047c6ae99SBarry Smith 
59147c6ae99SBarry Smith     Input Parameter:
59247c6ae99SBarry Smith +    dm - the packer object
59347c6ae99SBarry Smith -    dm - the DM object, if the DM is a da you will need to caste it with a (DM)
59447c6ae99SBarry Smith 
59547c6ae99SBarry Smith     Level: advanced
59647c6ae99SBarry Smith 
5970c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(),
5986eb61c8cSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
59947c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
60047c6ae99SBarry Smith 
60147c6ae99SBarry Smith @*/
6027087cfbeSBarry Smith PetscErrorCode  DMCompositeAddDM(DM dmc,DM dm)
60347c6ae99SBarry Smith {
60447c6ae99SBarry Smith   PetscErrorCode         ierr;
60506ebdd98SJed Brown   PetscInt               n,nlocal;
60647c6ae99SBarry Smith   struct DMCompositeLink *mine,*next;
60706ebdd98SJed Brown   Vec                    global,local;
60847c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmc->data;
60947c6ae99SBarry Smith 
61047c6ae99SBarry Smith   PetscFunctionBegin;
61147c6ae99SBarry Smith   PetscValidHeaderSpecific(dmc,DM_CLASSID,1);
61247c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,2);
61347c6ae99SBarry Smith   next = com->next;
614ce94432eSBarry Smith   if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite");
61547c6ae99SBarry Smith 
61647c6ae99SBarry Smith   /* create new link */
617b00a9115SJed Brown   ierr = PetscNew(&mine);CHKERRQ(ierr);
61847c6ae99SBarry Smith   ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr);
61947c6ae99SBarry Smith   ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr);
62047c6ae99SBarry Smith   ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr);
62147c6ae99SBarry Smith   ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr);
62206ebdd98SJed Brown   ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr);
62306ebdd98SJed Brown   ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr);
62406ebdd98SJed Brown   ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr);
6258865f1eaSKarl Rupp 
62647c6ae99SBarry Smith   mine->n      = n;
62706ebdd98SJed Brown   mine->nlocal = nlocal;
62847c6ae99SBarry Smith   mine->dm     = dm;
6290298fd71SBarry Smith   mine->next   = NULL;
63047c6ae99SBarry Smith   com->n      += n;
63147c6ae99SBarry Smith 
63247c6ae99SBarry Smith   /* add to end of list */
6338865f1eaSKarl Rupp   if (!next) com->next = mine;
6348865f1eaSKarl Rupp   else {
63547c6ae99SBarry Smith     while (next->next) next = next->next;
63647c6ae99SBarry Smith     next->next = mine;
63747c6ae99SBarry Smith   }
63847c6ae99SBarry Smith   com->nDM++;
63947c6ae99SBarry Smith   com->nmine++;
64047c6ae99SBarry Smith   PetscFunctionReturn(0);
64147c6ae99SBarry Smith }
64247c6ae99SBarry Smith 
6439804daf3SBarry Smith #include <petscdraw.h>
64426887b52SJed Brown PETSC_EXTERN PetscErrorCode  VecView_MPI(Vec,PetscViewer);
64547c6ae99SBarry Smith #undef __FUNCT__
64647c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite"
6477087cfbeSBarry Smith PetscErrorCode  VecView_DMComposite(Vec gvec,PetscViewer viewer)
64847c6ae99SBarry Smith {
64947c6ae99SBarry Smith   DM                     dm;
65047c6ae99SBarry Smith   PetscErrorCode         ierr;
65147c6ae99SBarry Smith   struct DMCompositeLink *next;
65247c6ae99SBarry Smith   PetscBool              isdraw;
653cef07954SSatish Balay   DM_Composite           *com;
65447c6ae99SBarry Smith 
65547c6ae99SBarry Smith   PetscFunctionBegin;
656c688c046SMatthew G Knepley   ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr);
657ce94432eSBarry Smith   if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite");
65847c6ae99SBarry Smith   com  = (DM_Composite*)dm->data;
65947c6ae99SBarry Smith   next = com->next;
66047c6ae99SBarry Smith 
661251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
66247c6ae99SBarry Smith   if (!isdraw) {
66347c6ae99SBarry Smith     /* do I really want to call this? */
66447c6ae99SBarry Smith     ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr);
66547c6ae99SBarry Smith   } else {
66647c6ae99SBarry Smith     PetscInt cnt = 0;
66747c6ae99SBarry Smith 
66847c6ae99SBarry Smith     /* loop over packed objects, handling one at at time */
66947c6ae99SBarry Smith     while (next) {
67047c6ae99SBarry Smith       Vec         vec;
6719ae5db72SJed Brown       PetscScalar *array;
67247c6ae99SBarry Smith       PetscInt    bs;
67347c6ae99SBarry Smith 
6749ae5db72SJed Brown       /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */
6759ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr);
6769ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
6779ae5db72SJed Brown       ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr);
6789ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
67947c6ae99SBarry Smith       ierr = VecView(vec,viewer);CHKERRQ(ierr);
68047c6ae99SBarry Smith       ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr);
6819ae5db72SJed Brown       ierr = VecResetArray(vec);CHKERRQ(ierr);
6829ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr);
68347c6ae99SBarry Smith       ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr);
68447c6ae99SBarry Smith       cnt += bs;
68547c6ae99SBarry Smith       next = next->next;
68647c6ae99SBarry Smith     }
68747c6ae99SBarry Smith     ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr);
68847c6ae99SBarry Smith   }
68947c6ae99SBarry Smith   PetscFunctionReturn(0);
69047c6ae99SBarry Smith }
69147c6ae99SBarry Smith 
69247c6ae99SBarry Smith #undef __FUNCT__
6930c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite"
6947087cfbeSBarry Smith PetscErrorCode  DMCreateGlobalVector_Composite(DM dm,Vec *gvec)
69547c6ae99SBarry Smith {
69647c6ae99SBarry Smith   PetscErrorCode ierr;
69747c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
69847c6ae99SBarry Smith 
69947c6ae99SBarry Smith   PetscFunctionBegin;
70047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
701d7bf68aeSBarry Smith   ierr = DMSetUp(dm);CHKERRQ(ierr);
702ce94432eSBarry Smith   ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr);
703c688c046SMatthew G Knepley   ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr);
70447c6ae99SBarry Smith   ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr);
70547c6ae99SBarry Smith   PetscFunctionReturn(0);
70647c6ae99SBarry Smith }
70747c6ae99SBarry Smith 
70847c6ae99SBarry Smith #undef __FUNCT__
7090c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite"
7107087cfbeSBarry Smith PetscErrorCode  DMCreateLocalVector_Composite(DM dm,Vec *lvec)
71147c6ae99SBarry Smith {
71247c6ae99SBarry Smith   PetscErrorCode ierr;
71347c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
71447c6ae99SBarry Smith 
71547c6ae99SBarry Smith   PetscFunctionBegin;
71647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
71747c6ae99SBarry Smith   if (!com->setup) {
718d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
71947c6ae99SBarry Smith   }
720ce94432eSBarry Smith   ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr);
721c688c046SMatthew G Knepley   ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr);
72247c6ae99SBarry Smith   PetscFunctionReturn(0);
72347c6ae99SBarry Smith }
72447c6ae99SBarry Smith 
72547c6ae99SBarry Smith #undef __FUNCT__
7266eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings"
72747c6ae99SBarry Smith /*@C
7289ae5db72SJed Brown     DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space
72947c6ae99SBarry Smith 
73006ebdd98SJed Brown     Collective on DM
73147c6ae99SBarry Smith 
73247c6ae99SBarry Smith     Input Parameter:
73347c6ae99SBarry Smith .    dm - the packer object
73447c6ae99SBarry Smith 
73547c6ae99SBarry Smith     Output Parameters:
7369ae5db72SJed Brown .    ltogs - the individual mappings for each packed vector. Note that this includes
7379ae5db72SJed Brown            all the ghost points that individual ghosted DMDA's may have.
73847c6ae99SBarry Smith 
73947c6ae99SBarry Smith     Level: advanced
74047c6ae99SBarry Smith 
74147c6ae99SBarry Smith     Notes:
7426eb61c8cSJed Brown        Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree().
74347c6ae99SBarry Smith 
7449ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
74547c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
74647c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
74747c6ae99SBarry Smith 
74847c6ae99SBarry Smith @*/
7497087cfbeSBarry Smith PetscErrorCode  DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs)
75047c6ae99SBarry Smith {
75147c6ae99SBarry Smith   PetscErrorCode         ierr;
75247c6ae99SBarry Smith   PetscInt               i,*idx,n,cnt;
75347c6ae99SBarry Smith   struct DMCompositeLink *next;
75447c6ae99SBarry Smith   PetscMPIInt            rank;
75547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
75647c6ae99SBarry Smith 
75747c6ae99SBarry Smith   PetscFunctionBegin;
75847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
759728e99d6SJed Brown   ierr = DMSetUp(dm);CHKERRQ(ierr);
760854ce69bSBarry Smith   ierr = PetscMalloc1(com->nDM,ltogs);CHKERRQ(ierr);
76147c6ae99SBarry Smith   next = com->next;
762ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
76347c6ae99SBarry Smith 
76447c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
76547c6ae99SBarry Smith   cnt = 0;
76647c6ae99SBarry Smith   while (next) {
7676eb61c8cSJed Brown     ISLocalToGlobalMapping ltog;
7686eb61c8cSJed Brown     PetscMPIInt            size;
76986994e45SJed Brown     const PetscInt         *suboff,*indices;
7706eb61c8cSJed Brown     Vec                    global;
77147c6ae99SBarry Smith 
7726eb61c8cSJed Brown     /* Get sub-DM global indices for each local dof */
7731411c6eeSJed Brown     ierr = DMGetLocalToGlobalMapping(next->dm,&ltog);CHKERRQ(ierr);
7746eb61c8cSJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr);
77586994e45SJed Brown     ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr);
776785e854fSJed Brown     ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr);
77747c6ae99SBarry Smith 
7786eb61c8cSJed Brown     /* Get the offsets for the sub-DM global vector */
7796eb61c8cSJed Brown     ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
7806eb61c8cSJed Brown     ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr);
781ce94432eSBarry Smith     ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr);
7826eb61c8cSJed Brown 
7836eb61c8cSJed Brown     /* Shift the sub-DM definition of the global space to the composite global space */
7846eb61c8cSJed Brown     for (i=0; i<n; i++) {
78586994e45SJed Brown       PetscInt subi = indices[i],lo = 0,hi = size,t;
7866eb61c8cSJed Brown       /* Binary search to find which rank owns subi */
7876eb61c8cSJed Brown       while (hi-lo > 1) {
7886eb61c8cSJed Brown         t = lo + (hi-lo)/2;
7896eb61c8cSJed Brown         if (suboff[t] > subi) hi = t;
7906eb61c8cSJed Brown         else                  lo = t;
7916eb61c8cSJed Brown       }
7926eb61c8cSJed Brown       idx[i] = subi - suboff[lo] + next->grstarts[lo];
7936eb61c8cSJed Brown     }
79486994e45SJed Brown     ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr);
795f0413b6fSBarry Smith     ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),1,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr);
7966eb61c8cSJed Brown     ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
79747c6ae99SBarry Smith     next = next->next;
79847c6ae99SBarry Smith     cnt++;
79947c6ae99SBarry Smith   }
80047c6ae99SBarry Smith   PetscFunctionReturn(0);
80147c6ae99SBarry Smith }
80247c6ae99SBarry Smith 
80347c6ae99SBarry Smith #undef __FUNCT__
80487c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs"
80587c85e80SJed Brown /*@C
8069ae5db72SJed Brown    DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector
80787c85e80SJed Brown 
80887c85e80SJed Brown    Not Collective
80987c85e80SJed Brown 
81087c85e80SJed Brown    Input Arguments:
81187c85e80SJed Brown . dm - composite DM
81287c85e80SJed Brown 
81387c85e80SJed Brown    Output Arguments:
81487c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite
81587c85e80SJed Brown 
81687c85e80SJed Brown    Level: intermediate
81787c85e80SJed Brown 
81887c85e80SJed Brown    Notes:
81987c85e80SJed Brown    At present, a composite local vector does not normally exist.  This function is used to provide index sets for
82087c85e80SJed Brown    MatGetLocalSubMatrix().  In the future, the scatters for each entry in the DMComposite may be be merged into a single
8219ae5db72SJed Brown    scatter to a composite local vector.  The user should not typically need to know which is being done.
82287c85e80SJed Brown 
82387c85e80SJed Brown    To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings().
82487c85e80SJed Brown 
82587c85e80SJed Brown    To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs().
82687c85e80SJed Brown 
82787c85e80SJed Brown    Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree().
82887c85e80SJed Brown 
82987c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef()
83087c85e80SJed Brown @*/
8317087cfbeSBarry Smith PetscErrorCode  DMCompositeGetLocalISs(DM dm,IS **is)
83287c85e80SJed Brown {
83387c85e80SJed Brown   PetscErrorCode         ierr;
83487c85e80SJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
83587c85e80SJed Brown   struct DMCompositeLink *link;
83687c85e80SJed Brown   PetscInt               cnt,start;
83787c85e80SJed Brown 
83887c85e80SJed Brown   PetscFunctionBegin;
83987c85e80SJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
84087c85e80SJed Brown   PetscValidPointer(is,2);
841785e854fSJed Brown   ierr = PetscMalloc1(com->nmine,is);CHKERRQ(ierr);
84206ebdd98SJed Brown   for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) {
843520db06cSJed Brown     PetscInt bs;
8449ae5db72SJed Brown     ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr);
8451411c6eeSJed Brown     ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr);
846520db06cSJed Brown     ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr);
847520db06cSJed Brown   }
84887c85e80SJed Brown   PetscFunctionReturn(0);
84987c85e80SJed Brown }
85087c85e80SJed Brown 
85187c85e80SJed Brown #undef __FUNCT__
85247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs"
85347c6ae99SBarry Smith /*@C
85447c6ae99SBarry Smith     DMCompositeGetGlobalISs - Gets the index sets for each composed object
85547c6ae99SBarry Smith 
85647c6ae99SBarry Smith     Collective on DMComposite
85747c6ae99SBarry Smith 
85847c6ae99SBarry Smith     Input Parameter:
85947c6ae99SBarry Smith .    dm - the packer object
86047c6ae99SBarry Smith 
86147c6ae99SBarry Smith     Output Parameters:
86247c6ae99SBarry Smith .    is - the array of index sets
86347c6ae99SBarry Smith 
86447c6ae99SBarry Smith     Level: advanced
86547c6ae99SBarry Smith 
86647c6ae99SBarry Smith     Notes:
86747c6ae99SBarry Smith        The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree()
86847c6ae99SBarry Smith 
86947c6ae99SBarry Smith        These could be used to extract a subset of vector entries for a "multi-physics" preconditioner
87047c6ae99SBarry Smith 
8716eb61c8cSJed Brown        Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and
8726eb61c8cSJed Brown        DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global
8736eb61c8cSJed Brown        indices.
87447c6ae99SBarry Smith 
8759ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
87647c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
87747c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
87847c6ae99SBarry Smith 
87947c6ae99SBarry Smith @*/
8806eb61c8cSJed Brown 
8817087cfbeSBarry Smith PetscErrorCode  DMCompositeGetGlobalISs(DM dm,IS *is[])
88247c6ae99SBarry Smith {
88347c6ae99SBarry Smith   PetscErrorCode         ierr;
88466bb578eSMark Adams   PetscInt               cnt = 0;
88547c6ae99SBarry Smith   struct DMCompositeLink *next;
88647c6ae99SBarry Smith   PetscMPIInt            rank;
88747c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
88847c6ae99SBarry Smith 
88947c6ae99SBarry Smith   PetscFunctionBegin;
89047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
891854ce69bSBarry Smith   ierr = PetscMalloc1(com->nDM,is);CHKERRQ(ierr);
89247c6ae99SBarry Smith   next = com->next;
893ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
89447c6ae99SBarry Smith 
89547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
89647c6ae99SBarry Smith   while (next) {
89766bb578eSMark Adams     ierr = ISCreateStride(PetscObjectComm((PetscObject)dm),next->n,next->grstart,1,&(*is)[cnt]);CHKERRQ(ierr);
8980f21e855SMatthew G. Knepley     if (dm->prob) {
89965c226d8SMatthew G. Knepley       MatNullSpace space;
90065c226d8SMatthew G. Knepley       Mat          pmat;
9010f21e855SMatthew G. Knepley       PetscObject  disc;
9020f21e855SMatthew G. Knepley       PetscInt     Nf;
90365c226d8SMatthew G. Knepley 
9042764a2aaSMatthew G. Knepley       ierr = PetscDSGetNumFields(dm->prob, &Nf);CHKERRQ(ierr);
905f24dd8d2SMatthew G. Knepley       if (cnt < Nf) {
9062764a2aaSMatthew G. Knepley         ierr = PetscDSGetDiscretization(dm->prob, cnt, &disc);CHKERRQ(ierr);
9070f21e855SMatthew G. Knepley         ierr = PetscObjectQuery(disc, "nullspace", (PetscObject*) &space);CHKERRQ(ierr);
908aac2dd2dSMatthew G. Knepley         if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nullspace", (PetscObject) space);CHKERRQ(ierr);}
9090f21e855SMatthew G. Knepley         ierr = PetscObjectQuery(disc, "nearnullspace", (PetscObject*) &space);CHKERRQ(ierr);
910aac2dd2dSMatthew G. Knepley         if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nearnullspace", (PetscObject) space);CHKERRQ(ierr);}
9110f21e855SMatthew G. Knepley         ierr = PetscObjectQuery(disc, "pmat", (PetscObject*) &pmat);CHKERRQ(ierr);
912aac2dd2dSMatthew G. Knepley         if (pmat) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "pmat", (PetscObject) pmat);CHKERRQ(ierr);}
91365c226d8SMatthew G. Knepley       }
914f24dd8d2SMatthew G. Knepley     }
91547c6ae99SBarry Smith     cnt++;
91647c6ae99SBarry Smith     next = next->next;
91747c6ae99SBarry Smith   }
91847c6ae99SBarry Smith   PetscFunctionReturn(0);
91947c6ae99SBarry Smith }
92047c6ae99SBarry Smith 
9214d343eeaSMatthew G Knepley #undef __FUNCT__
9224d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite"
92321c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields)
9244d343eeaSMatthew G Knepley {
9254d343eeaSMatthew G Knepley   PetscInt       nDM;
9264d343eeaSMatthew G Knepley   DM             *dms;
9274d343eeaSMatthew G Knepley   PetscInt       i;
9284d343eeaSMatthew G Knepley   PetscErrorCode ierr;
9294d343eeaSMatthew G Knepley 
9304d343eeaSMatthew G Knepley   PetscFunctionBegin;
9314d343eeaSMatthew G Knepley   ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr);
9328865f1eaSKarl Rupp   if (numFields) *numFields = nDM;
9334d343eeaSMatthew G Knepley   ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr);
9344d343eeaSMatthew G Knepley   if (fieldNames) {
935785e854fSJed Brown     ierr = PetscMalloc1(nDM, &dms);CHKERRQ(ierr);
936785e854fSJed Brown     ierr = PetscMalloc1(nDM, fieldNames);CHKERRQ(ierr);
9374d343eeaSMatthew G Knepley     ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr);
9384d343eeaSMatthew G Knepley     for (i=0; i<nDM; i++) {
9394d343eeaSMatthew G Knepley       char       buf[256];
9404d343eeaSMatthew G Knepley       const char *splitname;
9414d343eeaSMatthew G Knepley 
9424d343eeaSMatthew G Knepley       /* Split naming precedence: object name, prefix, number */
9434d343eeaSMatthew G Knepley       splitname = ((PetscObject) dm)->name;
9444d343eeaSMatthew G Knepley       if (!splitname) {
9454d343eeaSMatthew G Knepley         ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr);
9464d343eeaSMatthew G Knepley         if (splitname) {
9474d343eeaSMatthew G Knepley           size_t len;
9488caf3d72SBarry Smith           ierr                 = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr);
9498caf3d72SBarry Smith           buf[sizeof(buf) - 1] = 0;
9504d343eeaSMatthew G Knepley           ierr                 = PetscStrlen(buf,&len);CHKERRQ(ierr);
9514d343eeaSMatthew G Knepley           if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */
9524d343eeaSMatthew G Knepley           splitname = buf;
9534d343eeaSMatthew G Knepley         }
9544d343eeaSMatthew G Knepley       }
9554d343eeaSMatthew G Knepley       if (!splitname) {
9568caf3d72SBarry Smith         ierr      = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr);
9574d343eeaSMatthew G Knepley         splitname = buf;
9584d343eeaSMatthew G Knepley       }
95921c9b008SJed Brown       ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr);
9604d343eeaSMatthew G Knepley     }
9614d343eeaSMatthew G Knepley     ierr = PetscFree(dms);CHKERRQ(ierr);
9624d343eeaSMatthew G Knepley   }
9634d343eeaSMatthew G Knepley   PetscFunctionReturn(0);
9644d343eeaSMatthew G Knepley }
9654d343eeaSMatthew G Knepley 
966e7c4fc90SDmitry Karpeev /*
967e7c4fc90SDmitry Karpeev  This could take over from DMCreateFieldIS(), as it is more general,
9680298fd71SBarry Smith  making DMCreateFieldIS() a special case -- calling with dmlist == NULL;
969e7c4fc90SDmitry Karpeev  At this point it's probably best to be less intrusive, however.
970e7c4fc90SDmitry Karpeev  */
971e7c4fc90SDmitry Karpeev #undef __FUNCT__
97216621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite"
97316621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist)
974e7c4fc90SDmitry Karpeev {
975e7c4fc90SDmitry Karpeev   PetscInt       nDM;
976e7c4fc90SDmitry Karpeev   PetscInt       i;
977e7c4fc90SDmitry Karpeev   PetscErrorCode ierr;
978e7c4fc90SDmitry Karpeev 
979e7c4fc90SDmitry Karpeev   PetscFunctionBegin;
980e7c4fc90SDmitry Karpeev   ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr);
981e7c4fc90SDmitry Karpeev   if (dmlist) {
982e7c4fc90SDmitry Karpeev     ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr);
983785e854fSJed Brown     ierr = PetscMalloc1(nDM, dmlist);CHKERRQ(ierr);
984e7c4fc90SDmitry Karpeev     ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr);
985e7c4fc90SDmitry Karpeev     for (i=0; i<nDM; i++) {
986e7c4fc90SDmitry Karpeev       ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr);
987e7c4fc90SDmitry Karpeev     }
988e7c4fc90SDmitry Karpeev   }
989e7c4fc90SDmitry Karpeev   PetscFunctionReturn(0);
990e7c4fc90SDmitry Karpeev }
991e7c4fc90SDmitry Karpeev 
992e7c4fc90SDmitry Karpeev 
993e7c4fc90SDmitry Karpeev 
99447c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
99547c6ae99SBarry Smith #undef __FUNCT__
99647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors"
99747c6ae99SBarry Smith /*@C
9989ae5db72SJed Brown     DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite.
99947c6ae99SBarry Smith        Use DMCompositeRestoreLocalVectors() to return them.
100047c6ae99SBarry Smith 
100147c6ae99SBarry Smith     Not Collective
100247c6ae99SBarry Smith 
100347c6ae99SBarry Smith     Input Parameter:
100447c6ae99SBarry Smith .    dm - the packer object
100547c6ae99SBarry Smith 
100647c6ae99SBarry Smith     Output Parameter:
10079ae5db72SJed Brown .   Vec ... - the individual sequential Vecs
100847c6ae99SBarry Smith 
100947c6ae99SBarry Smith     Level: advanced
101047c6ae99SBarry Smith 
10119ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
10126eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
101347c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
101447c6ae99SBarry Smith 
101547c6ae99SBarry Smith @*/
10167087cfbeSBarry Smith PetscErrorCode  DMCompositeGetLocalVectors(DM dm,...)
101747c6ae99SBarry Smith {
101847c6ae99SBarry Smith   va_list                Argp;
101947c6ae99SBarry Smith   PetscErrorCode         ierr;
102047c6ae99SBarry Smith   struct DMCompositeLink *next;
102147c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
102247c6ae99SBarry Smith 
102347c6ae99SBarry Smith   PetscFunctionBegin;
102447c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
102547c6ae99SBarry Smith   next = com->next;
102647c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
102747c6ae99SBarry Smith   va_start(Argp,dm);
102847c6ae99SBarry Smith   while (next) {
102947c6ae99SBarry Smith     Vec *vec;
103047c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
103106930112SJed Brown     if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);}
103247c6ae99SBarry Smith     next = next->next;
103347c6ae99SBarry Smith   }
103447c6ae99SBarry Smith   va_end(Argp);
103547c6ae99SBarry Smith   PetscFunctionReturn(0);
103647c6ae99SBarry Smith }
103747c6ae99SBarry Smith 
103847c6ae99SBarry Smith #undef __FUNCT__
103947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors"
104047c6ae99SBarry Smith /*@C
10419ae5db72SJed Brown     DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite.
104247c6ae99SBarry Smith 
104347c6ae99SBarry Smith     Not Collective
104447c6ae99SBarry Smith 
104547c6ae99SBarry Smith     Input Parameter:
104647c6ae99SBarry Smith .    dm - the packer object
104747c6ae99SBarry Smith 
104847c6ae99SBarry Smith     Output Parameter:
10499ae5db72SJed Brown .   Vec ... - the individual sequential Vecs
105047c6ae99SBarry Smith 
105147c6ae99SBarry Smith     Level: advanced
105247c6ae99SBarry Smith 
10539ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
10546eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
105547c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
105647c6ae99SBarry Smith 
105747c6ae99SBarry Smith @*/
10587087cfbeSBarry Smith PetscErrorCode  DMCompositeRestoreLocalVectors(DM dm,...)
105947c6ae99SBarry Smith {
106047c6ae99SBarry Smith   va_list                Argp;
106147c6ae99SBarry Smith   PetscErrorCode         ierr;
106247c6ae99SBarry Smith   struct DMCompositeLink *next;
106347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
106447c6ae99SBarry Smith 
106547c6ae99SBarry Smith   PetscFunctionBegin;
106647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
106747c6ae99SBarry Smith   next = com->next;
106847c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
106947c6ae99SBarry Smith   va_start(Argp,dm);
107047c6ae99SBarry Smith   while (next) {
107147c6ae99SBarry Smith     Vec *vec;
107247c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
107306930112SJed Brown     if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);}
107447c6ae99SBarry Smith     next = next->next;
107547c6ae99SBarry Smith   }
107647c6ae99SBarry Smith   va_end(Argp);
107747c6ae99SBarry Smith   PetscFunctionReturn(0);
107847c6ae99SBarry Smith }
107947c6ae99SBarry Smith 
108047c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
108147c6ae99SBarry Smith #undef __FUNCT__
108247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries"
108347c6ae99SBarry Smith /*@C
10849ae5db72SJed Brown     DMCompositeGetEntries - Gets the DM for each entry in a DMComposite.
108547c6ae99SBarry Smith 
108647c6ae99SBarry Smith     Not Collective
108747c6ae99SBarry Smith 
108847c6ae99SBarry Smith     Input Parameter:
108947c6ae99SBarry Smith .    dm - the packer object
109047c6ae99SBarry Smith 
109147c6ae99SBarry Smith     Output Parameter:
10929ae5db72SJed Brown .   DM ... - the individual entries (DMs)
109347c6ae99SBarry Smith 
109447c6ae99SBarry Smith     Level: advanced
109547c6ae99SBarry Smith 
10962fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray()
10976eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
109847c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(),  DMCompositeScatter(),
109947c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors()
110047c6ae99SBarry Smith 
110147c6ae99SBarry Smith @*/
11027087cfbeSBarry Smith PetscErrorCode  DMCompositeGetEntries(DM dm,...)
110347c6ae99SBarry Smith {
110447c6ae99SBarry Smith   va_list                Argp;
110547c6ae99SBarry Smith   struct DMCompositeLink *next;
110647c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
110747c6ae99SBarry Smith 
110847c6ae99SBarry Smith   PetscFunctionBegin;
110947c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
111047c6ae99SBarry Smith   next = com->next;
111147c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
111247c6ae99SBarry Smith   va_start(Argp,dm);
111347c6ae99SBarry Smith   while (next) {
111447c6ae99SBarry Smith     DM *dmn;
111547c6ae99SBarry Smith     dmn = va_arg(Argp, DM*);
11169ae5db72SJed Brown     if (dmn) *dmn = next->dm;
111747c6ae99SBarry Smith     next = next->next;
111847c6ae99SBarry Smith   }
111947c6ae99SBarry Smith   va_end(Argp);
112047c6ae99SBarry Smith   PetscFunctionReturn(0);
112147c6ae99SBarry Smith }
112247c6ae99SBarry Smith 
112347c6ae99SBarry Smith #undef __FUNCT__
11242fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray"
1125dbab29e1SMark F. Adams /*@C
11262fa5ba8aSJed Brown     DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite.
11272fa5ba8aSJed Brown 
11282fa5ba8aSJed Brown     Not Collective
11292fa5ba8aSJed Brown 
11302fa5ba8aSJed Brown     Input Parameter:
1131*907376e6SBarry Smith .    dm - the packer object
1132*907376e6SBarry Smith 
1133*907376e6SBarry Smith     Output Parameter:
1134*907376e6SBarry Smith .    dms - array of sufficient length (see DMCompositeGetNumberDM()) to hold the individual DMs
11352fa5ba8aSJed Brown 
11362fa5ba8aSJed Brown     Level: advanced
11372fa5ba8aSJed Brown 
11382fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries()
11392fa5ba8aSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
11402fa5ba8aSJed Brown          DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(),  DMCompositeScatter(),
11412fa5ba8aSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors()
11422fa5ba8aSJed Brown 
11432fa5ba8aSJed Brown @*/
11442fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[])
11452fa5ba8aSJed Brown {
11462fa5ba8aSJed Brown   struct DMCompositeLink *next;
11472fa5ba8aSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
11482fa5ba8aSJed Brown   PetscInt               i;
11492fa5ba8aSJed Brown 
11502fa5ba8aSJed Brown   PetscFunctionBegin;
11512fa5ba8aSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
11522fa5ba8aSJed Brown   /* loop over packed objects, handling one at at time */
11532fa5ba8aSJed Brown   for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm;
11542fa5ba8aSJed Brown   PetscFunctionReturn(0);
11552fa5ba8aSJed Brown }
11562fa5ba8aSJed Brown 
11572fa5ba8aSJed Brown #undef __FUNCT__
11580c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite"
11597087cfbeSBarry Smith PetscErrorCode  DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine)
116047c6ae99SBarry Smith {
116147c6ae99SBarry Smith   PetscErrorCode         ierr;
116247c6ae99SBarry Smith   struct DMCompositeLink *next;
116347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmi->data;
116447c6ae99SBarry Smith   DM                     dm;
116547c6ae99SBarry Smith 
116647c6ae99SBarry Smith   PetscFunctionBegin;
116747c6ae99SBarry Smith   PetscValidHeaderSpecific(dmi,DM_CLASSID,1);
1168ce94432eSBarry Smith   if (comm == MPI_COMM_NULL) {
1169ce94432eSBarry Smith     ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr);
1170ce94432eSBarry Smith   }
11712ce3a92bSJed Brown   ierr = DMSetUp(dmi);CHKERRQ(ierr);
117247c6ae99SBarry Smith   next = com->next;
117347c6ae99SBarry Smith   ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr);
117447c6ae99SBarry Smith 
117547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
117647c6ae99SBarry Smith   while (next) {
117747c6ae99SBarry Smith     ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr);
117847c6ae99SBarry Smith     ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr);
117947c6ae99SBarry Smith     ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr);
118047c6ae99SBarry Smith     next = next->next;
118147c6ae99SBarry Smith   }
118247c6ae99SBarry Smith   PetscFunctionReturn(0);
118347c6ae99SBarry Smith }
118447c6ae99SBarry Smith 
118514354c39SJed Brown #undef __FUNCT__
118614354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite"
118714354c39SJed Brown PetscErrorCode  DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine)
118814354c39SJed Brown {
118914354c39SJed Brown   PetscErrorCode         ierr;
119014354c39SJed Brown   struct DMCompositeLink *next;
119114354c39SJed Brown   DM_Composite           *com = (DM_Composite*)dmi->data;
119214354c39SJed Brown   DM                     dm;
119314354c39SJed Brown 
119414354c39SJed Brown   PetscFunctionBegin;
119514354c39SJed Brown   PetscValidHeaderSpecific(dmi,DM_CLASSID,1);
11962ce3a92bSJed Brown   ierr = DMSetUp(dmi);CHKERRQ(ierr);
11972ee06e3bSJed Brown   if (comm == MPI_COMM_NULL) {
119825296bd5SBarry Smith     ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr);
119925296bd5SBarry Smith   }
120014354c39SJed Brown   next = com->next;
120114354c39SJed Brown   ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr);
120214354c39SJed Brown 
120314354c39SJed Brown   /* loop over packed objects, handling one at at time */
120414354c39SJed Brown   while (next) {
120514354c39SJed Brown     ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr);
120614354c39SJed Brown     ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr);
120714354c39SJed Brown     ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr);
120814354c39SJed Brown     next = next->next;
120914354c39SJed Brown   }
121014354c39SJed Brown   PetscFunctionReturn(0);
121114354c39SJed Brown }
121247c6ae99SBarry Smith 
121347c6ae99SBarry Smith #undef __FUNCT__
1214e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite"
1215e727c939SJed Brown PetscErrorCode  DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v)
121647c6ae99SBarry Smith {
121747c6ae99SBarry Smith   PetscErrorCode         ierr;
12189ae5db72SJed Brown   PetscInt               m,n,M,N,nDM,i;
121947c6ae99SBarry Smith   struct DMCompositeLink *nextc;
122047c6ae99SBarry Smith   struct DMCompositeLink *nextf;
122125296bd5SBarry Smith   Vec                    gcoarse,gfine,*vecs;
122247c6ae99SBarry Smith   DM_Composite           *comcoarse = (DM_Composite*)coarse->data;
122347c6ae99SBarry Smith   DM_Composite           *comfine   = (DM_Composite*)fine->data;
12249ae5db72SJed Brown   Mat                    *mats;
122547c6ae99SBarry Smith 
122647c6ae99SBarry Smith   PetscFunctionBegin;
122747c6ae99SBarry Smith   PetscValidHeaderSpecific(coarse,DM_CLASSID,1);
122847c6ae99SBarry Smith   PetscValidHeaderSpecific(fine,DM_CLASSID,2);
1229f692024eSJed Brown   ierr = DMSetUp(coarse);CHKERRQ(ierr);
1230f692024eSJed Brown   ierr = DMSetUp(fine);CHKERRQ(ierr);
123147c6ae99SBarry Smith   /* use global vectors only for determining matrix layout */
12329ae5db72SJed Brown   ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr);
12339ae5db72SJed Brown   ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr);
123447c6ae99SBarry Smith   ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr);
123547c6ae99SBarry Smith   ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr);
123647c6ae99SBarry Smith   ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr);
123747c6ae99SBarry Smith   ierr = VecGetSize(gfine,&M);CHKERRQ(ierr);
12389ae5db72SJed Brown   ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr);
12399ae5db72SJed Brown   ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr);
124047c6ae99SBarry Smith 
12419ae5db72SJed Brown   nDM = comfine->nDM;
1242ce94432eSBarry Smith   if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM);
12431795a4d1SJed Brown   ierr = PetscCalloc1(nDM*nDM,&mats);CHKERRQ(ierr);
124425296bd5SBarry Smith   if (v) {
12451795a4d1SJed Brown     ierr = PetscCalloc1(nDM,&vecs);CHKERRQ(ierr);
124625296bd5SBarry Smith   }
124747c6ae99SBarry Smith 
124847c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
12499ae5db72SJed Brown   for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) {
125025296bd5SBarry Smith     if (!v) {
12510298fd71SBarry Smith       ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr);
125225296bd5SBarry Smith     } else {
125325296bd5SBarry Smith       ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr);
125425296bd5SBarry Smith     }
125547c6ae99SBarry Smith   }
1256ce94432eSBarry Smith   ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr);
125725296bd5SBarry Smith   if (v) {
1258ce94432eSBarry Smith     ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr);
125925296bd5SBarry Smith   }
12609ae5db72SJed Brown   for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);}
12619ae5db72SJed Brown   ierr = PetscFree(mats);CHKERRQ(ierr);
126225296bd5SBarry Smith   if (v) {
126325296bd5SBarry Smith     for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);}
126425296bd5SBarry Smith     ierr = PetscFree(vecs);CHKERRQ(ierr);
126525296bd5SBarry Smith   }
126647c6ae99SBarry Smith   PetscFunctionReturn(0);
126747c6ae99SBarry Smith }
126847c6ae99SBarry Smith 
126947c6ae99SBarry Smith #undef __FUNCT__
1270184d77edSJed Brown #define __FUNCT__ "DMGetLocalToGlobalMapping_Composite"
1271184d77edSJed Brown static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm)
12721411c6eeSJed Brown {
12731411c6eeSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
12741411c6eeSJed Brown   ISLocalToGlobalMapping *ltogs;
1275f7efa3c7SJed Brown   PetscInt               i;
12761411c6eeSJed Brown   PetscErrorCode         ierr;
12771411c6eeSJed Brown 
12781411c6eeSJed Brown   PetscFunctionBegin;
12791411c6eeSJed Brown   /* Set the ISLocalToGlobalMapping on the new matrix */
12801411c6eeSJed Brown   ierr = DMCompositeGetISLocalToGlobalMappings(dm,&ltogs);CHKERRQ(ierr);
1281ce94432eSBarry Smith   ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr);
12829ae5db72SJed Brown   for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(&ltogs[i]);CHKERRQ(ierr);}
12831411c6eeSJed Brown   ierr = PetscFree(ltogs);CHKERRQ(ierr);
12841411c6eeSJed Brown   PetscFunctionReturn(0);
12851411c6eeSJed Brown }
12861411c6eeSJed Brown 
12871411c6eeSJed Brown 
12881411c6eeSJed Brown #undef __FUNCT__
1289e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite"
1290b412c318SBarry Smith PetscErrorCode  DMCreateColoring_Composite(DM dm,ISColoringType ctype,ISColoring *coloring)
129147c6ae99SBarry Smith {
129247c6ae99SBarry Smith   PetscErrorCode  ierr;
129347c6ae99SBarry Smith   PetscInt        n,i,cnt;
129447c6ae99SBarry Smith   ISColoringValue *colors;
129547c6ae99SBarry Smith   PetscBool       dense  = PETSC_FALSE;
129647c6ae99SBarry Smith   ISColoringValue maxcol = 0;
129747c6ae99SBarry Smith   DM_Composite    *com   = (DM_Composite*)dm->data;
129847c6ae99SBarry Smith 
129947c6ae99SBarry Smith   PetscFunctionBegin;
130047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
1301ce94432eSBarry Smith   if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported");
1302e3247f34SBarry Smith   else if (ctype == IS_COLORING_GLOBAL) {
130347c6ae99SBarry Smith     n = com->n;
1304ce94432eSBarry Smith   } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType");
1305785e854fSJed Brown   ierr = PetscMalloc1(n,&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */
130647c6ae99SBarry Smith 
13070298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr);
130847c6ae99SBarry Smith   if (dense) {
130947c6ae99SBarry Smith     for (i=0; i<n; i++) {
131047c6ae99SBarry Smith       colors[i] = (ISColoringValue)(com->rstart + i);
131147c6ae99SBarry Smith     }
131247c6ae99SBarry Smith     maxcol = com->N;
131347c6ae99SBarry Smith   } else {
131447c6ae99SBarry Smith     struct DMCompositeLink *next = com->next;
131547c6ae99SBarry Smith     PetscMPIInt            rank;
131647c6ae99SBarry Smith 
1317ce94432eSBarry Smith     ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
131847c6ae99SBarry Smith     cnt  = 0;
131947c6ae99SBarry Smith     while (next) {
132047c6ae99SBarry Smith       ISColoring lcoloring;
132147c6ae99SBarry Smith 
1322b412c318SBarry Smith       ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,&lcoloring);CHKERRQ(ierr);
132347c6ae99SBarry Smith       for (i=0; i<lcoloring->N; i++) {
132447c6ae99SBarry Smith         colors[cnt++] = maxcol + lcoloring->colors[i];
132547c6ae99SBarry Smith       }
132647c6ae99SBarry Smith       maxcol += lcoloring->n;
1327fcfd50ebSBarry Smith       ierr    = ISColoringDestroy(&lcoloring);CHKERRQ(ierr);
132847c6ae99SBarry Smith       next    = next->next;
132947c6ae99SBarry Smith     }
133047c6ae99SBarry Smith   }
1331aaf3ff59SMatthew G. Knepley   ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,PETSC_OWN_POINTER,coloring);CHKERRQ(ierr);
133247c6ae99SBarry Smith   PetscFunctionReturn(0);
133347c6ae99SBarry Smith }
133447c6ae99SBarry Smith 
133547c6ae99SBarry Smith #undef __FUNCT__
13360c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite"
13377087cfbeSBarry Smith PetscErrorCode  DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
133847c6ae99SBarry Smith {
133947c6ae99SBarry Smith   PetscErrorCode         ierr;
134047c6ae99SBarry Smith   struct DMCompositeLink *next;
134147c6ae99SBarry Smith   PetscInt               cnt = 3;
134247c6ae99SBarry Smith   PetscMPIInt            rank;
134347c6ae99SBarry Smith   PetscScalar            *garray,*larray;
134447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
134547c6ae99SBarry Smith 
134647c6ae99SBarry Smith   PetscFunctionBegin;
134747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
134847c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
134947c6ae99SBarry Smith   next = com->next;
135047c6ae99SBarry Smith   if (!com->setup) {
1351d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
135247c6ae99SBarry Smith   }
1353ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
135447c6ae99SBarry Smith   ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr);
135547c6ae99SBarry Smith   ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr);
135647c6ae99SBarry Smith 
135747c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
135847c6ae99SBarry Smith   while (next) {
135947c6ae99SBarry Smith     Vec      local,global;
136047c6ae99SBarry Smith     PetscInt N;
136147c6ae99SBarry Smith 
136247c6ae99SBarry Smith     ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
136347c6ae99SBarry Smith     ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr);
136447c6ae99SBarry Smith     ierr = VecPlaceArray(global,garray);CHKERRQ(ierr);
136547c6ae99SBarry Smith     ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr);
136647c6ae99SBarry Smith     ierr = VecPlaceArray(local,larray);CHKERRQ(ierr);
136747c6ae99SBarry Smith     ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr);
136847c6ae99SBarry Smith     ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr);
136947c6ae99SBarry Smith     ierr = VecResetArray(global);CHKERRQ(ierr);
137047c6ae99SBarry Smith     ierr = VecResetArray(local);CHKERRQ(ierr);
137147c6ae99SBarry Smith     ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
137247c6ae99SBarry Smith     ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr);
137347c6ae99SBarry Smith     cnt++;
137406ebdd98SJed Brown     larray += next->nlocal;
137547c6ae99SBarry Smith     next    = next->next;
137647c6ae99SBarry Smith   }
137747c6ae99SBarry Smith 
13780298fd71SBarry Smith   ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr);
13790298fd71SBarry Smith   ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr);
138047c6ae99SBarry Smith   PetscFunctionReturn(0);
138147c6ae99SBarry Smith }
138247c6ae99SBarry Smith 
138347c6ae99SBarry Smith #undef __FUNCT__
13840c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite"
13857087cfbeSBarry Smith PetscErrorCode  DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
13860c010503SBarry Smith {
13870c010503SBarry Smith   PetscFunctionBegin;
13880c010503SBarry Smith   PetscFunctionReturn(0);
13890c010503SBarry Smith }
139047c6ae99SBarry Smith 
13916ae3a549SBarry Smith /*MC
13926ae3a549SBarry Smith    DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs
13936ae3a549SBarry Smith 
13946ae3a549SBarry Smith   Level: intermediate
13956ae3a549SBarry Smith 
13961abcec8cSBarry Smith .seealso: DMType, DM, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate()
13976ae3a549SBarry Smith M*/
13986ae3a549SBarry Smith 
13996ae3a549SBarry Smith 
1400a4121054SBarry Smith #undef __FUNCT__
1401a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite"
14028cc058d9SJed Brown PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p)
1403a4121054SBarry Smith {
1404a4121054SBarry Smith   PetscErrorCode ierr;
1405a4121054SBarry Smith   DM_Composite   *com;
1406a4121054SBarry Smith 
1407a4121054SBarry Smith   PetscFunctionBegin;
1408b00a9115SJed Brown   ierr      = PetscNewLog(p,&com);CHKERRQ(ierr);
1409a4121054SBarry Smith   p->data   = com;
1410a4121054SBarry Smith   ierr      = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr);
1411a4121054SBarry Smith   com->n    = 0;
14120298fd71SBarry Smith   com->next = NULL;
1413a4121054SBarry Smith   com->nDM  = 0;
1414a4121054SBarry Smith 
1415a4121054SBarry Smith   p->ops->createglobalvector              = DMCreateGlobalVector_Composite;
1416a4121054SBarry Smith   p->ops->createlocalvector               = DMCreateLocalVector_Composite;
1417184d77edSJed Brown   p->ops->getlocaltoglobalmapping         = DMGetLocalToGlobalMapping_Composite;
14184d343eeaSMatthew G Knepley   p->ops->createfieldis                   = DMCreateFieldIS_Composite;
141916621825SDmitry Karpeev   p->ops->createfielddecomposition        = DMCreateFieldDecomposition_Composite;
1420a4121054SBarry Smith   p->ops->refine                          = DMRefine_Composite;
142114354c39SJed Brown   p->ops->coarsen                         = DMCoarsen_Composite;
142225296bd5SBarry Smith   p->ops->createinterpolation             = DMCreateInterpolation_Composite;
142325296bd5SBarry Smith   p->ops->creatematrix                    = DMCreateMatrix_Composite;
1424e727c939SJed Brown   p->ops->getcoloring                     = DMCreateColoring_Composite;
1425a4121054SBarry Smith   p->ops->globaltolocalbegin              = DMGlobalToLocalBegin_Composite;
1426a4121054SBarry Smith   p->ops->globaltolocalend                = DMGlobalToLocalEnd_Composite;
1427a4121054SBarry Smith   p->ops->destroy                         = DMDestroy_Composite;
1428a4121054SBarry Smith   p->ops->view                            = DMView_Composite;
1429a4121054SBarry Smith   p->ops->setup                           = DMSetUp_Composite;
1430a4121054SBarry Smith   PetscFunctionReturn(0);
1431a4121054SBarry Smith }
1432a4121054SBarry Smith 
14330c010503SBarry Smith #undef __FUNCT__
14340c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate"
14350c010503SBarry Smith /*@C
14360c010503SBarry Smith     DMCompositeCreate - Creates a vector packer, used to generate "composite"
14370c010503SBarry Smith       vectors made up of several subvectors.
14380c010503SBarry Smith 
14390c010503SBarry Smith     Collective on MPI_Comm
144047c6ae99SBarry Smith 
144147c6ae99SBarry Smith     Input Parameter:
14420c010503SBarry Smith .   comm - the processors that will share the global vector
14430c010503SBarry Smith 
14440c010503SBarry Smith     Output Parameters:
14450c010503SBarry Smith .   packer - the packer object
144647c6ae99SBarry Smith 
144747c6ae99SBarry Smith     Level: advanced
144847c6ae99SBarry Smith 
14491abcec8cSBarry Smith .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(), DMCOMPOSITE,DMCreate()
14506eb61c8cSJed Brown          DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess()
145147c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
145247c6ae99SBarry Smith 
145347c6ae99SBarry Smith @*/
14547087cfbeSBarry Smith PetscErrorCode  DMCompositeCreate(MPI_Comm comm,DM *packer)
145547c6ae99SBarry Smith {
14560c010503SBarry Smith   PetscErrorCode ierr;
14570c010503SBarry Smith 
145847c6ae99SBarry Smith   PetscFunctionBegin;
14590c010503SBarry Smith   PetscValidPointer(packer,2);
1460a4121054SBarry Smith   ierr = DMCreate(comm,packer);CHKERRQ(ierr);
1461a4121054SBarry Smith   ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr);
146247c6ae99SBarry Smith   PetscFunctionReturn(0);
146347c6ae99SBarry Smith }
1464