147c6ae99SBarry Smith #define PETSCDM_DLL 247c6ae99SBarry Smith 3*ec9811eeSJed Brown #include "packimpl.h" /*I "petscdm.h" I*/ 447c6ae99SBarry Smith 547c6ae99SBarry Smith #undef __FUNCT__ 647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 747c6ae99SBarry Smith /*@C 847c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 9aa219208SBarry Smith seperate components (DMDA's and arrays) in a DMto build the correct matrix nonzero structure. 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith 1247c6ae99SBarry Smith Logically Collective on MPI_Comm 1347c6ae99SBarry Smith 1447c6ae99SBarry Smith Input Parameter: 1547c6ae99SBarry Smith + dm - the composite object 1647c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1747c6ae99SBarry Smith 1847c6ae99SBarry Smith Level: advanced 1947c6ae99SBarry Smith 2047c6ae99SBarry Smith Notes: See DMCompositeSetContext() and DMCompositeGetContext() for how to get user information into 2147c6ae99SBarry Smith this routine 2247c6ae99SBarry Smith 2347c6ae99SBarry Smith @*/ 2447c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2547c6ae99SBarry Smith { 2647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2747c6ae99SBarry Smith 2847c6ae99SBarry Smith PetscFunctionBegin; 2947c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 3047c6ae99SBarry Smith PetscFunctionReturn(0); 3147c6ae99SBarry Smith } 3247c6ae99SBarry Smith 3347c6ae99SBarry Smith #undef __FUNCT__ 3447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetContext" 3547c6ae99SBarry Smith /*@ 3647c6ae99SBarry Smith DMCompositeSetContext - Allows user to stash data they may need within the form coupling routine they 3747c6ae99SBarry Smith set with DMCompositeSetCoupling() 3847c6ae99SBarry Smith 3947c6ae99SBarry Smith 4047c6ae99SBarry Smith Not Collective 4147c6ae99SBarry Smith 4247c6ae99SBarry Smith Input Parameter: 4347c6ae99SBarry Smith + dm - the composite object 4447c6ae99SBarry Smith - ctx - the user supplied context 4547c6ae99SBarry Smith 4647c6ae99SBarry Smith Level: advanced 4747c6ae99SBarry Smith 4847c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 4947c6ae99SBarry Smith 5047c6ae99SBarry Smith @*/ 5147c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeSetContext(DM dm,void *ctx) 5247c6ae99SBarry Smith { 5347c6ae99SBarry Smith PetscFunctionBegin; 5447c6ae99SBarry Smith dm->ctx = ctx; 5547c6ae99SBarry Smith PetscFunctionReturn(0); 5647c6ae99SBarry Smith } 5747c6ae99SBarry Smith 5847c6ae99SBarry Smith #undef __FUNCT__ 5947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetContext" 6047c6ae99SBarry Smith /*@ 6147c6ae99SBarry Smith DMCompositeGetContext - Access the context set with DMCompositeSetContext() 6247c6ae99SBarry Smith 6347c6ae99SBarry Smith 6447c6ae99SBarry Smith Not Collective 6547c6ae99SBarry Smith 6647c6ae99SBarry Smith Input Parameter: 6747c6ae99SBarry Smith . dm - the composite object 6847c6ae99SBarry Smith 6947c6ae99SBarry Smith Output Parameter: 7047c6ae99SBarry Smith . ctx - the user supplied context 7147c6ae99SBarry Smith 7247c6ae99SBarry Smith Level: advanced 7347c6ae99SBarry Smith 7447c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 7547c6ae99SBarry Smith 7647c6ae99SBarry Smith @*/ 7747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetContext(DM dm,void **ctx) 7847c6ae99SBarry Smith { 7947c6ae99SBarry Smith PetscFunctionBegin; 8047c6ae99SBarry Smith *ctx = dm->ctx; 8147c6ae99SBarry Smith PetscFunctionReturn(0); 8247c6ae99SBarry Smith } 8347c6ae99SBarry Smith 8447c6ae99SBarry Smith 8547c6ae99SBarry Smith 8647c6ae99SBarry Smith extern PetscErrorCode DMDestroy_Private(DM,PetscBool *); 8747c6ae99SBarry Smith 8847c6ae99SBarry Smith #undef __FUNCT__ 890c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 900c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDestroy_Composite(DM dm) 9147c6ae99SBarry Smith { 9247c6ae99SBarry Smith PetscErrorCode ierr; 9347c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 9447c6ae99SBarry Smith PetscBool done; 9547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 9647c6ae99SBarry Smith 9747c6ae99SBarry Smith PetscFunctionBegin; 9847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 9947c6ae99SBarry Smith ierr = DMDestroy_Private((DM)dm,&done);CHKERRQ(ierr); 10047c6ae99SBarry Smith if (!done) PetscFunctionReturn(0); 10147c6ae99SBarry Smith 10247c6ae99SBarry Smith next = com->next; 10347c6ae99SBarry Smith while (next) { 10447c6ae99SBarry Smith prev = next; 10547c6ae99SBarry Smith next = next->next; 10647c6ae99SBarry Smith if (prev->type == DMCOMPOSITE_DM) { 10747c6ae99SBarry Smith ierr = DMDestroy(prev->dm);CHKERRQ(ierr); 10847c6ae99SBarry Smith } 10947c6ae99SBarry Smith if (prev->grstarts) { 11047c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 11147c6ae99SBarry Smith } 11247c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 11347c6ae99SBarry Smith } 11447c6ae99SBarry Smith ierr = PetscFree(com);CHKERRQ(ierr); 11547c6ae99SBarry Smith ierr = PetscHeaderDestroy(dm);CHKERRQ(ierr); 11647c6ae99SBarry Smith PetscFunctionReturn(0); 11747c6ae99SBarry Smith } 11847c6ae99SBarry Smith 11947c6ae99SBarry Smith #undef __FUNCT__ 1200c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 1210c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMView_Composite(DM dm,PetscViewer v) 12247c6ae99SBarry Smith { 12347c6ae99SBarry Smith PetscErrorCode ierr; 12447c6ae99SBarry Smith PetscBool iascii; 12547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 12647c6ae99SBarry Smith 12747c6ae99SBarry Smith PetscFunctionBegin; 12847c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 12947c6ae99SBarry Smith if (iascii) { 13047c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 13147c6ae99SBarry Smith PetscInt i; 13247c6ae99SBarry Smith 13347c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix?((PetscObject)dm)->prefix:"no prefix");CHKERRQ(ierr); 13447c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v," contains %d DMs and %d redundant arrays\n",com->nDM,com->nredundant);CHKERRQ(ierr); 13547c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 13647c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 13747c6ae99SBarry Smith if (lnk->dm) { 13847c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"Link %d: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 13947c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 14047c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 14147c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 14247c6ae99SBarry Smith } else { 14306ebdd98SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %d: Redundant array of size %d owned by rank %d\n",i,lnk->nlocal,lnk->rank);CHKERRQ(ierr); 14447c6ae99SBarry Smith } 14547c6ae99SBarry Smith } 14647c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 14747c6ae99SBarry Smith } 14847c6ae99SBarry Smith PetscFunctionReturn(0); 14947c6ae99SBarry Smith } 15047c6ae99SBarry Smith 15147c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 15247c6ae99SBarry Smith #undef __FUNCT__ 153d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 154d7bf68aeSBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMSetUp_Composite(DM dm) 15547c6ae99SBarry Smith { 15647c6ae99SBarry Smith PetscErrorCode ierr; 15747c6ae99SBarry Smith PetscInt nprev = 0; 15847c6ae99SBarry Smith PetscMPIInt rank,size; 15947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 16047c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 16147c6ae99SBarry Smith PetscLayout map; 16247c6ae99SBarry Smith 16347c6ae99SBarry Smith PetscFunctionBegin; 16447c6ae99SBarry Smith if (com->setup) SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 16547c6ae99SBarry Smith ierr = PetscLayoutCreate(((PetscObject)dm)->comm,&map);CHKERRQ(ierr); 16647c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 16747c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 16847c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 16947c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 17047c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 17147c6ae99SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,PETSC_NULL);CHKERRQ(ierr); 17247c6ae99SBarry Smith ierr = PetscLayoutDestroy(map);CHKERRQ(ierr); 17347c6ae99SBarry Smith 17447c6ae99SBarry Smith /* now set the rstart for each linked array/vector */ 17547c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 17647c6ae99SBarry Smith ierr = MPI_Comm_size(((PetscObject)dm)->comm,&size);CHKERRQ(ierr); 17747c6ae99SBarry Smith while (next) { 17847c6ae99SBarry Smith next->rstart = nprev; 17906ebdd98SJed Brown nprev += next->n; 18047c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 18147c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 18247c6ae99SBarry Smith ierr = MPI_Bcast(&next->grstart,1,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 18347c6ae99SBarry Smith } else { 18447c6ae99SBarry Smith ierr = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr); 18547c6ae99SBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,((PetscObject)dm)->comm);CHKERRQ(ierr); 18647c6ae99SBarry Smith } 18747c6ae99SBarry Smith next = next->next; 18847c6ae99SBarry Smith } 18947c6ae99SBarry Smith com->setup = PETSC_TRUE; 19047c6ae99SBarry Smith PetscFunctionReturn(0); 19147c6ae99SBarry Smith } 19247c6ae99SBarry Smith 19347c6ae99SBarry Smith 19447c6ae99SBarry Smith #undef __FUNCT__ 19547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_Array" 19647c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 19747c6ae99SBarry Smith { 19847c6ae99SBarry Smith PetscErrorCode ierr; 19947c6ae99SBarry Smith PetscScalar *varray; 20047c6ae99SBarry Smith PetscMPIInt rank; 20147c6ae99SBarry Smith 20247c6ae99SBarry Smith PetscFunctionBegin; 20347c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 20447c6ae99SBarry Smith if (array) { 20547c6ae99SBarry Smith if (rank == mine->rank) { 20647c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 20747c6ae99SBarry Smith *array = varray + mine->rstart; 20847c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 20947c6ae99SBarry Smith } else { 21047c6ae99SBarry Smith *array = 0; 21147c6ae99SBarry Smith } 21247c6ae99SBarry Smith } 21347c6ae99SBarry Smith PetscFunctionReturn(0); 21447c6ae99SBarry Smith } 21547c6ae99SBarry Smith 21647c6ae99SBarry Smith #undef __FUNCT__ 21747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_DM" 21847c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 21947c6ae99SBarry Smith { 22047c6ae99SBarry Smith PetscErrorCode ierr; 22147c6ae99SBarry Smith PetscScalar *array; 22247c6ae99SBarry Smith 22347c6ae99SBarry Smith PetscFunctionBegin; 22447c6ae99SBarry Smith if (global) { 22547c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,global);CHKERRQ(ierr); 22647c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 22747c6ae99SBarry Smith ierr = VecPlaceArray(*global,array+mine->rstart);CHKERRQ(ierr); 22847c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 22947c6ae99SBarry Smith } 23047c6ae99SBarry Smith PetscFunctionReturn(0); 23147c6ae99SBarry Smith } 23247c6ae99SBarry Smith 23347c6ae99SBarry Smith #undef __FUNCT__ 23447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_Array" 23547c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 23647c6ae99SBarry Smith { 23747c6ae99SBarry Smith PetscFunctionBegin; 23847c6ae99SBarry Smith PetscFunctionReturn(0); 23947c6ae99SBarry Smith } 24047c6ae99SBarry Smith 24147c6ae99SBarry Smith #undef __FUNCT__ 24247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_DM" 24347c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 24447c6ae99SBarry Smith { 24547c6ae99SBarry Smith PetscErrorCode ierr; 24647c6ae99SBarry Smith 24747c6ae99SBarry Smith PetscFunctionBegin; 24847c6ae99SBarry Smith if (global) { 24947c6ae99SBarry Smith ierr = VecResetArray(*global);CHKERRQ(ierr); 25047c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,global);CHKERRQ(ierr); 25147c6ae99SBarry Smith } 25247c6ae99SBarry Smith PetscFunctionReturn(0); 25347c6ae99SBarry Smith } 25447c6ae99SBarry Smith 25547c6ae99SBarry Smith #undef __FUNCT__ 25647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_Array" 25747c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar *array) 25847c6ae99SBarry Smith { 25947c6ae99SBarry Smith PetscErrorCode ierr; 26047c6ae99SBarry Smith PetscScalar *varray; 26147c6ae99SBarry Smith PetscMPIInt rank; 26247c6ae99SBarry Smith 26347c6ae99SBarry Smith PetscFunctionBegin; 26447c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 26547c6ae99SBarry Smith if (rank == mine->rank) { 26647c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 26747c6ae99SBarry Smith ierr = PetscMemcpy(array,varray+mine->rstart,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 26847c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 26947c6ae99SBarry Smith } 27006ebdd98SJed Brown ierr = MPI_Bcast(array,mine->nlocal,MPIU_SCALAR,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 27147c6ae99SBarry Smith PetscFunctionReturn(0); 27247c6ae99SBarry Smith } 27347c6ae99SBarry Smith 27447c6ae99SBarry Smith #undef __FUNCT__ 27547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_DM" 27647c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec local) 27747c6ae99SBarry Smith { 27847c6ae99SBarry Smith PetscErrorCode ierr; 27947c6ae99SBarry Smith PetscScalar *array; 28047c6ae99SBarry Smith Vec global; 28147c6ae99SBarry Smith 28247c6ae99SBarry Smith PetscFunctionBegin; 28347c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 28447c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 28547c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 28647c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 28747c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 28847c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 28947c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 29047c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 29147c6ae99SBarry Smith PetscFunctionReturn(0); 29247c6ae99SBarry Smith } 29347c6ae99SBarry Smith 29447c6ae99SBarry Smith #undef __FUNCT__ 29547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_Array" 296acc1e270SJed Brown PetscErrorCode DMCompositeGather_Array(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,const PetscScalar *array) 29747c6ae99SBarry Smith { 29847c6ae99SBarry Smith PetscErrorCode ierr; 29947c6ae99SBarry Smith PetscScalar *varray; 30047c6ae99SBarry Smith PetscMPIInt rank; 30147c6ae99SBarry Smith 30247c6ae99SBarry Smith PetscFunctionBegin; 30347c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 30447c6ae99SBarry Smith if (rank == mine->rank) { 30547c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 30647c6ae99SBarry Smith if (varray+mine->rstart == array) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"You need not DMCompositeGather() into objects obtained via DMCompositeGetAccess()"); 307acc1e270SJed Brown } 308df0c820aSJed Brown switch (imode) { 309df0c820aSJed Brown case INSERT_VALUES: 310acc1e270SJed Brown if (rank == mine->rank) { 31147c6ae99SBarry Smith ierr = PetscMemcpy(varray+mine->rstart,array,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 312acc1e270SJed Brown } 313df0c820aSJed Brown break; 314df0c820aSJed Brown case ADD_VALUES: { 315df0c820aSJed Brown PetscInt i; 316760fd489SMatthew G Knepley void *source; 317acc1e270SJed Brown PetscScalar *buffer,*dest; 318acc1e270SJed Brown if (rank == mine->rank) { 319acc1e270SJed Brown dest = &varray[mine->rstart]; 320acc1e270SJed Brown #if defined(PETSC_HAVE_MPI_IN_PLACE) 321acc1e270SJed Brown buffer = dest; 322acc1e270SJed Brown source = MPI_IN_PLACE; 323acc1e270SJed Brown #else 32406ebdd98SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),&buffer);CHKERRQ(ierr); 325760fd489SMatthew G Knepley source = (void *) buffer; 326acc1e270SJed Brown #endif 32706ebdd98SJed Brown for (i=0; i<mine->nlocal; i++) buffer[i] = varray[mine->rstart+i] + array[i]; 328acc1e270SJed Brown } else { 329760fd489SMatthew G Knepley source = (void *) array; 330acc1e270SJed Brown dest = PETSC_NULL; 331acc1e270SJed Brown } 33206ebdd98SJed Brown ierr = MPI_Reduce(source,dest,mine->nlocal,MPIU_SCALAR,MPI_SUM,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 333acc1e270SJed Brown #if !defined(PETSC_HAVE_MPI_IN_PLACE) 334acc1e270SJed Brown if (rank == mine->rank) {ierr = PetscFree(source);CHKERRQ(ierr);} 335acc1e270SJed Brown #endif 336df0c820aSJed Brown } break; 337df0c820aSJed Brown default: SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"imode"); 338df0c820aSJed Brown } 339acc1e270SJed Brown if (rank == mine->rank) {ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr);} 34047c6ae99SBarry Smith PetscFunctionReturn(0); 34147c6ae99SBarry Smith } 34247c6ae99SBarry Smith 34347c6ae99SBarry Smith #undef __FUNCT__ 34447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_DM" 345df0c820aSJed Brown PetscErrorCode DMCompositeGather_DM(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,Vec local) 34647c6ae99SBarry Smith { 34747c6ae99SBarry Smith PetscErrorCode ierr; 34847c6ae99SBarry Smith PetscScalar *array; 34947c6ae99SBarry Smith Vec global; 35047c6ae99SBarry Smith 35147c6ae99SBarry Smith PetscFunctionBegin; 35247c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 35347c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 35447c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 355df0c820aSJed Brown ierr = DMLocalToGlobalBegin(mine->dm,local,imode,global);CHKERRQ(ierr); 356df0c820aSJed Brown ierr = DMLocalToGlobalEnd(mine->dm,local,imode,global);CHKERRQ(ierr); 35747c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 35847c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 35947c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 36047c6ae99SBarry Smith PetscFunctionReturn(0); 36147c6ae99SBarry Smith } 36247c6ae99SBarry Smith 36347c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 36447c6ae99SBarry Smith 36547c6ae99SBarry Smith #include <stdarg.h> 36647c6ae99SBarry Smith 36747c6ae99SBarry Smith #undef __FUNCT__ 36847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 36947c6ae99SBarry Smith /*@C 37047c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 37147c6ae99SBarry Smith representation. 37247c6ae99SBarry Smith 37347c6ae99SBarry Smith Not Collective 37447c6ae99SBarry Smith 37547c6ae99SBarry Smith Input Parameter: 37647c6ae99SBarry Smith . dm - the packer object 37747c6ae99SBarry Smith 37847c6ae99SBarry Smith Output Parameter: 37947c6ae99SBarry Smith . nDM - the number of DMs 38047c6ae99SBarry Smith 38147c6ae99SBarry Smith Level: beginner 38247c6ae99SBarry Smith 38347c6ae99SBarry Smith @*/ 38447c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 38547c6ae99SBarry Smith { 38647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38747c6ae99SBarry Smith PetscFunctionBegin; 38847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38947c6ae99SBarry Smith *nDM = com->nDM; 39047c6ae99SBarry Smith PetscFunctionReturn(0); 39147c6ae99SBarry Smith } 39247c6ae99SBarry Smith 39347c6ae99SBarry Smith 39447c6ae99SBarry Smith #undef __FUNCT__ 39547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 39647c6ae99SBarry Smith /*@C 39747c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 39847c6ae99SBarry Smith representation. 39947c6ae99SBarry Smith 40047c6ae99SBarry Smith Collective on DMComposite 40147c6ae99SBarry Smith 40247c6ae99SBarry Smith Input Parameter: 40347c6ae99SBarry Smith + dm - the packer object 40447c6ae99SBarry Smith . gvec - the global vector 40547c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 40647c6ae99SBarry Smith 40747c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 40847c6ae99SBarry Smith 40947c6ae99SBarry Smith Level: advanced 41047c6ae99SBarry Smith 41147c6ae99SBarry Smith @*/ 41247c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetAccess(DM dm,Vec gvec,...) 41347c6ae99SBarry Smith { 41447c6ae99SBarry Smith va_list Argp; 41547c6ae99SBarry Smith PetscErrorCode ierr; 41647c6ae99SBarry Smith struct DMCompositeLink *next; 41747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 41847c6ae99SBarry Smith 41947c6ae99SBarry Smith PetscFunctionBegin; 42047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 42147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 42247c6ae99SBarry Smith next = com->next; 42347c6ae99SBarry Smith if (!com->setup) { 424d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 42547c6ae99SBarry Smith } 42647c6ae99SBarry Smith 42747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 42847c6ae99SBarry Smith va_start(Argp,gvec); 42947c6ae99SBarry Smith while (next) { 43047c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 43147c6ae99SBarry Smith PetscScalar **array; 43247c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 43347c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 43447c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 43547c6ae99SBarry Smith Vec *vec; 43647c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 43747c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 43847c6ae99SBarry Smith } else { 43947c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 44047c6ae99SBarry Smith } 44147c6ae99SBarry Smith next = next->next; 44247c6ae99SBarry Smith } 44347c6ae99SBarry Smith va_end(Argp); 44447c6ae99SBarry Smith PetscFunctionReturn(0); 44547c6ae99SBarry Smith } 44647c6ae99SBarry Smith 44747c6ae99SBarry Smith #undef __FUNCT__ 44847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 44947c6ae99SBarry Smith /*@C 450aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 45147c6ae99SBarry Smith representation. 45247c6ae99SBarry Smith 45347c6ae99SBarry Smith Collective on DMComposite 45447c6ae99SBarry Smith 45547c6ae99SBarry Smith Input Parameter: 45647c6ae99SBarry Smith + dm - the packer object 45747c6ae99SBarry Smith . gvec - the global vector 45847c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 45947c6ae99SBarry Smith 46047c6ae99SBarry Smith Level: advanced 46147c6ae99SBarry Smith 4620c010503SBarry Smith .seealso DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 4636eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 464aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 46547c6ae99SBarry Smith 46647c6ae99SBarry Smith @*/ 46747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeRestoreAccess(DM dm,Vec gvec,...) 46847c6ae99SBarry Smith { 46947c6ae99SBarry Smith va_list Argp; 47047c6ae99SBarry Smith PetscErrorCode ierr; 47147c6ae99SBarry Smith struct DMCompositeLink *next; 47247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 47347c6ae99SBarry Smith 47447c6ae99SBarry Smith PetscFunctionBegin; 47547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 47647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 47747c6ae99SBarry Smith next = com->next; 47847c6ae99SBarry Smith if (!com->setup) { 479d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 48047c6ae99SBarry Smith } 48147c6ae99SBarry Smith 48247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 48347c6ae99SBarry Smith va_start(Argp,gvec); 48447c6ae99SBarry Smith while (next) { 48547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 48647c6ae99SBarry Smith PetscScalar **array; 48747c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 48847c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 48947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 49047c6ae99SBarry Smith Vec *vec; 49147c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 49247c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 49347c6ae99SBarry Smith } else { 49447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 49547c6ae99SBarry Smith } 49647c6ae99SBarry Smith next = next->next; 49747c6ae99SBarry Smith } 49847c6ae99SBarry Smith va_end(Argp); 49947c6ae99SBarry Smith PetscFunctionReturn(0); 50047c6ae99SBarry Smith } 50147c6ae99SBarry Smith 50247c6ae99SBarry Smith #undef __FUNCT__ 50347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 50447c6ae99SBarry Smith /*@C 50547c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 50647c6ae99SBarry Smith 50747c6ae99SBarry Smith Collective on DMComposite 50847c6ae99SBarry Smith 50947c6ae99SBarry Smith Input Parameter: 51047c6ae99SBarry Smith + dm - the packer object 51147c6ae99SBarry Smith . gvec - the global vector 5128fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for those that are not needed 51347c6ae99SBarry Smith 51447c6ae99SBarry Smith Level: advanced 51547c6ae99SBarry Smith 5160c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5176eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 51847c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 51947c6ae99SBarry Smith 52047c6ae99SBarry Smith @*/ 52147c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeScatter(DM dm,Vec gvec,...) 52247c6ae99SBarry Smith { 52347c6ae99SBarry Smith va_list Argp; 52447c6ae99SBarry Smith PetscErrorCode ierr; 52547c6ae99SBarry Smith struct DMCompositeLink *next; 5268fd8f222SJed Brown PetscInt cnt; 52747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 52847c6ae99SBarry Smith 52947c6ae99SBarry Smith PetscFunctionBegin; 53047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 53147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 53247c6ae99SBarry Smith if (!com->setup) { 533d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 53447c6ae99SBarry Smith } 53547c6ae99SBarry Smith 53647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 53747c6ae99SBarry Smith va_start(Argp,gvec); 5388fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 53947c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 54047c6ae99SBarry Smith PetscScalar *array; 54147c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 542c72eef85SJed Brown if (array) PetscValidScalarPointer(array,cnt); 543c72eef85SJed Brown PetscValidLogicalCollectiveBool(dm,!!array,cnt); 5448fd8f222SJed Brown if (!array) continue; 54547c6ae99SBarry Smith ierr = DMCompositeScatter_Array(dm,next,gvec,array);CHKERRQ(ierr); 54647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 54747c6ae99SBarry Smith Vec vec; 54847c6ae99SBarry Smith vec = va_arg(Argp, Vec); 5498fd8f222SJed Brown if (!vec) continue; 55047c6ae99SBarry Smith PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 55147c6ae99SBarry Smith ierr = DMCompositeScatter_DM(dm,next,gvec,vec);CHKERRQ(ierr); 55247c6ae99SBarry Smith } else { 55347c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 55447c6ae99SBarry Smith } 55547c6ae99SBarry Smith } 55647c6ae99SBarry Smith va_end(Argp); 55747c6ae99SBarry Smith PetscFunctionReturn(0); 55847c6ae99SBarry Smith } 55947c6ae99SBarry Smith 56047c6ae99SBarry Smith #undef __FUNCT__ 56147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 56247c6ae99SBarry Smith /*@C 56347c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 56447c6ae99SBarry Smith 56547c6ae99SBarry Smith Collective on DMComposite 56647c6ae99SBarry Smith 56747c6ae99SBarry Smith Input Parameter: 56847c6ae99SBarry Smith + dm - the packer object 56947c6ae99SBarry Smith . gvec - the global vector 5708fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for any that are not needed 57147c6ae99SBarry Smith 57247c6ae99SBarry Smith Level: advanced 57347c6ae99SBarry Smith 5740c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5756eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 57647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 57747c6ae99SBarry Smith 57847c6ae99SBarry Smith @*/ 579df0c820aSJed Brown PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 58047c6ae99SBarry Smith { 58147c6ae99SBarry Smith va_list Argp; 58247c6ae99SBarry Smith PetscErrorCode ierr; 58347c6ae99SBarry Smith struct DMCompositeLink *next; 58447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 5858fd8f222SJed Brown PetscInt cnt; 58647c6ae99SBarry Smith 58747c6ae99SBarry Smith PetscFunctionBegin; 58847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 58947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 59047c6ae99SBarry Smith if (!com->setup) { 591d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 59247c6ae99SBarry Smith } 59347c6ae99SBarry Smith 59447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 595df0c820aSJed Brown va_start(Argp,imode); 5968fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 59747c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 59847c6ae99SBarry Smith PetscScalar *array; 59947c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 6008fd8f222SJed Brown if (!array) continue; 6018fd8f222SJed Brown PetscValidScalarPointer(array,cnt); 602df0c820aSJed Brown ierr = DMCompositeGather_Array(dm,next,gvec,imode,array);CHKERRQ(ierr); 60347c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 60447c6ae99SBarry Smith Vec vec; 60547c6ae99SBarry Smith vec = va_arg(Argp, Vec); 6068fd8f222SJed Brown if (!vec) continue; 6078fd8f222SJed Brown PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 608df0c820aSJed Brown ierr = DMCompositeGather_DM(dm,next,gvec,imode,vec);CHKERRQ(ierr); 60947c6ae99SBarry Smith } else { 61047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 61147c6ae99SBarry Smith } 61247c6ae99SBarry Smith } 61347c6ae99SBarry Smith va_end(Argp); 61447c6ae99SBarry Smith PetscFunctionReturn(0); 61547c6ae99SBarry Smith } 61647c6ae99SBarry Smith 61747c6ae99SBarry Smith #undef __FUNCT__ 61847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddArray" 61947c6ae99SBarry Smith /*@C 62047c6ae99SBarry Smith DMCompositeAddArray - adds an "redundant" array to a DMComposite. The array values will 62147c6ae99SBarry Smith be stored in part of the array on process orank. 62247c6ae99SBarry Smith 62347c6ae99SBarry Smith Collective on DMComposite 62447c6ae99SBarry Smith 62547c6ae99SBarry Smith Input Parameter: 62647c6ae99SBarry Smith + dm - the packer object 62747c6ae99SBarry Smith . orank - the process on which the array entries officially live, this number must be 62847c6ae99SBarry Smith the same on all processes. 62947c6ae99SBarry Smith - n - the length of the array 63047c6ae99SBarry Smith 63147c6ae99SBarry Smith Level: advanced 63247c6ae99SBarry Smith 6330c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6346eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 63547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 63647c6ae99SBarry Smith 63747c6ae99SBarry Smith @*/ 63847c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeAddArray(DM dm,PetscMPIInt orank,PetscInt n) 63947c6ae99SBarry Smith { 64047c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 64147c6ae99SBarry Smith PetscErrorCode ierr; 64247c6ae99SBarry Smith PetscMPIInt rank; 64347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 64447c6ae99SBarry Smith 64547c6ae99SBarry Smith PetscFunctionBegin; 64647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 64747c6ae99SBarry Smith next = com->next; 64847c6ae99SBarry Smith if (com->setup) { 64947c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add an array once you have used the DMComposite"); 65047c6ae99SBarry Smith } 65147c6ae99SBarry Smith #if defined(PETSC_USE_DEBUG) 65247c6ae99SBarry Smith { 65347c6ae99SBarry Smith PetscMPIInt orankmax; 65447c6ae99SBarry Smith ierr = MPI_Allreduce(&orank,&orankmax,1,MPI_INT,MPI_MAX,((PetscObject)dm)->comm);CHKERRQ(ierr); 65547c6ae99SBarry Smith if (orank != orankmax) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"orank %d must be equal on all processes, another process has value %d",orank,orankmax); 65647c6ae99SBarry Smith } 65747c6ae99SBarry Smith #endif 65847c6ae99SBarry Smith 65947c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 66047c6ae99SBarry Smith /* create new link */ 66147c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 66206ebdd98SJed Brown mine->nlocal = n; 66306ebdd98SJed Brown mine->n = (rank == orank) ? n : 0; 66447c6ae99SBarry Smith mine->rank = orank; 66547c6ae99SBarry Smith mine->dm = PETSC_NULL; 66647c6ae99SBarry Smith mine->type = DMCOMPOSITE_ARRAY; 66747c6ae99SBarry Smith mine->next = PETSC_NULL; 66847c6ae99SBarry Smith if (rank == mine->rank) {com->n += n;com->nmine++;} 66947c6ae99SBarry Smith 67047c6ae99SBarry Smith /* add to end of list */ 67147c6ae99SBarry Smith if (!next) { 67247c6ae99SBarry Smith com->next = mine; 67347c6ae99SBarry Smith } else { 67447c6ae99SBarry Smith while (next->next) next = next->next; 67547c6ae99SBarry Smith next->next = mine; 67647c6ae99SBarry Smith } 67747c6ae99SBarry Smith com->nredundant++; 67847c6ae99SBarry Smith PetscFunctionReturn(0); 67947c6ae99SBarry Smith } 68047c6ae99SBarry Smith 68147c6ae99SBarry Smith #undef __FUNCT__ 68247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 68347c6ae99SBarry Smith /*@C 684aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 68547c6ae99SBarry Smith 68647c6ae99SBarry Smith Collective on DMComposite 68747c6ae99SBarry Smith 68847c6ae99SBarry Smith Input Parameter: 68947c6ae99SBarry Smith + dm - the packer object 69047c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 69147c6ae99SBarry Smith 69247c6ae99SBarry Smith Level: advanced 69347c6ae99SBarry Smith 6940c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6956eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 69647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 69747c6ae99SBarry Smith 69847c6ae99SBarry Smith @*/ 69947c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeAddDM(DM dmc,DM dm) 70047c6ae99SBarry Smith { 70147c6ae99SBarry Smith PetscErrorCode ierr; 70206ebdd98SJed Brown PetscInt n,nlocal; 70347c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 70406ebdd98SJed Brown Vec global,local; 70547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 70647c6ae99SBarry Smith 70747c6ae99SBarry Smith PetscFunctionBegin; 70847c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 70947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 71047c6ae99SBarry Smith next = com->next; 711aa219208SBarry Smith if (com->setup) SETERRQ(((PetscObject)dmc)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 71247c6ae99SBarry Smith 71347c6ae99SBarry Smith /* create new link */ 71447c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 71547c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 71647c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 71747c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 71847c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 71906ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 72006ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 72106ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 72247c6ae99SBarry Smith mine->n = n; 72306ebdd98SJed Brown mine->nlocal = nlocal; 72447c6ae99SBarry Smith mine->dm = dm; 72547c6ae99SBarry Smith mine->type = DMCOMPOSITE_DM; 72647c6ae99SBarry Smith mine->next = PETSC_NULL; 72747c6ae99SBarry Smith com->n += n; 72847c6ae99SBarry Smith 72947c6ae99SBarry Smith /* add to end of list */ 73047c6ae99SBarry Smith if (!next) { 73147c6ae99SBarry Smith com->next = mine; 73247c6ae99SBarry Smith } else { 73347c6ae99SBarry Smith while (next->next) next = next->next; 73447c6ae99SBarry Smith next->next = mine; 73547c6ae99SBarry Smith } 73647c6ae99SBarry Smith com->nDM++; 73747c6ae99SBarry Smith com->nmine++; 73847c6ae99SBarry Smith PetscFunctionReturn(0); 73947c6ae99SBarry Smith } 74047c6ae99SBarry Smith 74147c6ae99SBarry Smith extern PetscErrorCode PETSCDM_DLLEXPORT VecView_MPI(Vec,PetscViewer); 74247c6ae99SBarry Smith EXTERN_C_BEGIN 74347c6ae99SBarry Smith #undef __FUNCT__ 74447c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 74547c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT VecView_DMComposite(Vec gvec,PetscViewer viewer) 74647c6ae99SBarry Smith { 74747c6ae99SBarry Smith DM dm; 74847c6ae99SBarry Smith PetscErrorCode ierr; 74947c6ae99SBarry Smith struct DMCompositeLink *next; 75047c6ae99SBarry Smith PetscBool isdraw; 751cef07954SSatish Balay DM_Composite *com; 75247c6ae99SBarry Smith 75347c6ae99SBarry Smith PetscFunctionBegin; 75447c6ae99SBarry Smith ierr = PetscObjectQuery((PetscObject)gvec,"DMComposite",(PetscObject*)&dm);CHKERRQ(ierr); 75547c6ae99SBarry Smith if (!dm) SETERRQ(((PetscObject)gvec)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 75647c6ae99SBarry Smith com = (DM_Composite*)dm->data; 75747c6ae99SBarry Smith next = com->next; 75847c6ae99SBarry Smith 75947c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 76047c6ae99SBarry Smith if (!isdraw) { 76147c6ae99SBarry Smith /* do I really want to call this? */ 76247c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 76347c6ae99SBarry Smith } else { 76447c6ae99SBarry Smith PetscInt cnt = 0; 76547c6ae99SBarry Smith 76647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76747c6ae99SBarry Smith while (next) { 76847c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 76947c6ae99SBarry Smith PetscScalar *array; 77047c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,&array);CHKERRQ(ierr); 77147c6ae99SBarry Smith 77247c6ae99SBarry Smith /*skip it for now */ 77347c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 77447c6ae99SBarry Smith Vec vec; 77547c6ae99SBarry Smith PetscInt bs; 77647c6ae99SBarry Smith 77747c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 77847c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 77947c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 78047c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 78147c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 78247c6ae99SBarry Smith cnt += bs; 78347c6ae99SBarry Smith } else { 78447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 78547c6ae99SBarry Smith } 78647c6ae99SBarry Smith next = next->next; 78747c6ae99SBarry Smith } 78847c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 78947c6ae99SBarry Smith } 79047c6ae99SBarry Smith PetscFunctionReturn(0); 79147c6ae99SBarry Smith } 79247c6ae99SBarry Smith EXTERN_C_END 79347c6ae99SBarry Smith 79447c6ae99SBarry Smith 79547c6ae99SBarry Smith #undef __FUNCT__ 7960c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 7970c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 79847c6ae99SBarry Smith { 79947c6ae99SBarry Smith PetscErrorCode ierr; 80047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 80147c6ae99SBarry Smith 80247c6ae99SBarry Smith PetscFunctionBegin; 80347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 80447c6ae99SBarry Smith if (!com->setup) { 805d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 80647c6ae99SBarry Smith } 80747c6ae99SBarry Smith ierr = VecCreateMPI(((PetscObject)dm)->comm,com->n,com->N,gvec);CHKERRQ(ierr); 80847c6ae99SBarry Smith ierr = PetscObjectCompose((PetscObject)*gvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr); 80947c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void(*)(void))VecView_DMComposite);CHKERRQ(ierr); 81047c6ae99SBarry Smith PetscFunctionReturn(0); 81147c6ae99SBarry Smith } 81247c6ae99SBarry Smith 81347c6ae99SBarry Smith #undef __FUNCT__ 8140c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 8150c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCreateLocalVector_Composite(DM dm,Vec *lvec) 81647c6ae99SBarry Smith { 81747c6ae99SBarry Smith PetscErrorCode ierr; 81847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 81947c6ae99SBarry Smith 82047c6ae99SBarry Smith PetscFunctionBegin; 82147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 82247c6ae99SBarry Smith if (!com->setup) { 823d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 82447c6ae99SBarry Smith } 82547c6ae99SBarry Smith ierr = VecCreateSeq(((PetscObject)dm)->comm,com->nghost,lvec);CHKERRQ(ierr); 82647c6ae99SBarry Smith ierr = PetscObjectCompose((PetscObject)*lvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr); 82747c6ae99SBarry Smith PetscFunctionReturn(0); 82847c6ae99SBarry Smith } 82947c6ae99SBarry Smith 83047c6ae99SBarry Smith #undef __FUNCT__ 8316eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 83247c6ae99SBarry Smith /*@C 8336eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM/array in the DMComposite, maps to the composite global space 83447c6ae99SBarry Smith 83506ebdd98SJed Brown Collective on DM 83647c6ae99SBarry Smith 83747c6ae99SBarry Smith Input Parameter: 83847c6ae99SBarry Smith . dm - the packer object 83947c6ae99SBarry Smith 84047c6ae99SBarry Smith Output Parameters: 8416eb61c8cSJed Brown . ltogs - the individual mappings for each packed vector/array. Note that this includes 842aa219208SBarry Smith all the ghost points that individual ghosted DMDA's may have. Also each process has an 8436eb61c8cSJed Brown mapping for EACH redundant array (not just the local redundant arrays). 84447c6ae99SBarry Smith 84547c6ae99SBarry Smith Level: advanced 84647c6ae99SBarry Smith 84747c6ae99SBarry Smith Notes: 8486eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 84947c6ae99SBarry Smith 8500c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 85147c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 85247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 85347c6ae99SBarry Smith 85447c6ae99SBarry Smith @*/ 8556eb61c8cSJed Brown PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 85647c6ae99SBarry Smith { 85747c6ae99SBarry Smith PetscErrorCode ierr; 85847c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 85947c6ae99SBarry Smith struct DMCompositeLink *next; 86047c6ae99SBarry Smith PetscMPIInt rank; 86147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 86247c6ae99SBarry Smith 86347c6ae99SBarry Smith PetscFunctionBegin; 86447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 865acc1e270SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(ISLocalToGlobalMapping),ltogs);CHKERRQ(ierr); 86647c6ae99SBarry Smith next = com->next; 86747c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 86847c6ae99SBarry Smith 86947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 87047c6ae99SBarry Smith cnt = 0; 87147c6ae99SBarry Smith while (next) { 87247c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 87306ebdd98SJed Brown ierr = PetscMalloc(next->nlocal*sizeof(PetscInt),&idx);CHKERRQ(ierr); 87447c6ae99SBarry Smith if (rank == next->rank) { 87506ebdd98SJed Brown for (i=0; i<next->nlocal; i++) idx[i] = next->grstart + i; 87647c6ae99SBarry Smith } 87706ebdd98SJed Brown ierr = MPI_Bcast(idx,next->nlocal,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 87806ebdd98SJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,next->nlocal,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 87947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 8806eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8816eb61c8cSJed Brown PetscMPIInt size; 88286994e45SJed Brown const PetscInt *suboff,*indices; 8836eb61c8cSJed Brown Vec global; 88447c6ae99SBarry Smith 8856eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8861411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 8876eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 88886994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 88947c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 89047c6ae99SBarry Smith 8916eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8926eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 8936eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 8946eb61c8cSJed Brown ierr = MPI_Comm_size(((PetscObject)global)->comm,&size);CHKERRQ(ierr); 8956eb61c8cSJed Brown 8966eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 8976eb61c8cSJed Brown for (i=0; i<n; i++) { 89886994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 8996eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 9006eb61c8cSJed Brown while (hi-lo > 1) { 9016eb61c8cSJed Brown t = lo + (hi-lo)/2; 9026eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 9036eb61c8cSJed Brown else lo = t; 9046eb61c8cSJed Brown } 9056eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 9066eb61c8cSJed Brown } 90786994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 9086eb61c8cSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 9096eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 9106eb61c8cSJed Brown } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 91147c6ae99SBarry Smith next = next->next; 91247c6ae99SBarry Smith cnt++; 91347c6ae99SBarry Smith } 91447c6ae99SBarry Smith PetscFunctionReturn(0); 91547c6ae99SBarry Smith } 91647c6ae99SBarry Smith 91747c6ae99SBarry Smith #undef __FUNCT__ 91887c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 91987c85e80SJed Brown /*@C 92087c85e80SJed Brown DMCompositeGetLocalISs - Gets index sets for each DM/array component of a composite local vector 92187c85e80SJed Brown 92287c85e80SJed Brown Not Collective 92387c85e80SJed Brown 92487c85e80SJed Brown Input Arguments: 92587c85e80SJed Brown . dm - composite DM 92687c85e80SJed Brown 92787c85e80SJed Brown Output Arguments: 92887c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 92987c85e80SJed Brown 93087c85e80SJed Brown Level: intermediate 93187c85e80SJed Brown 93287c85e80SJed Brown Notes: 93387c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 93487c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 93587c85e80SJed Brown scatter to a composite local vector. 93687c85e80SJed Brown 93787c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 93887c85e80SJed Brown 93987c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 94087c85e80SJed Brown 94187c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 94287c85e80SJed Brown 94387c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 94487c85e80SJed Brown @*/ 94587c85e80SJed Brown PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetLocalISs(DM dm,IS **is) 94687c85e80SJed Brown { 94787c85e80SJed Brown PetscErrorCode ierr; 94887c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 94987c85e80SJed Brown struct DMCompositeLink *link; 95087c85e80SJed Brown PetscInt cnt,start; 95187c85e80SJed Brown 95287c85e80SJed Brown PetscFunctionBegin; 95387c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 95487c85e80SJed Brown PetscValidPointer(is,2); 95587c85e80SJed Brown ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr); 95606ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 95706ebdd98SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 958520db06cSJed Brown if (link->type == DMCOMPOSITE_DM) { 959520db06cSJed Brown PetscInt bs; 9601411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 961520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 962520db06cSJed Brown } 96387c85e80SJed Brown } 96487c85e80SJed Brown PetscFunctionReturn(0); 96587c85e80SJed Brown } 96687c85e80SJed Brown 96787c85e80SJed Brown #undef __FUNCT__ 96847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 96947c6ae99SBarry Smith /*@C 97047c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 97147c6ae99SBarry Smith 97247c6ae99SBarry Smith Collective on DMComposite 97347c6ae99SBarry Smith 97447c6ae99SBarry Smith Input Parameter: 97547c6ae99SBarry Smith . dm - the packer object 97647c6ae99SBarry Smith 97747c6ae99SBarry Smith Output Parameters: 97847c6ae99SBarry Smith . is - the array of index sets 97947c6ae99SBarry Smith 98047c6ae99SBarry Smith Level: advanced 98147c6ae99SBarry Smith 98247c6ae99SBarry Smith Notes: 98347c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 98447c6ae99SBarry Smith 98547c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 98647c6ae99SBarry Smith 9876eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 9886eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 9896eb61c8cSJed Brown indices. 99047c6ae99SBarry Smith 9910c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 99247c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 99347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 99447c6ae99SBarry Smith 99547c6ae99SBarry Smith @*/ 9966eb61c8cSJed Brown 99747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetGlobalISs(DM dm,IS *is[]) 99847c6ae99SBarry Smith { 99947c6ae99SBarry Smith PetscErrorCode ierr; 100047c6ae99SBarry Smith PetscInt cnt = 0,*idx,i; 100147c6ae99SBarry Smith struct DMCompositeLink *next; 100247c6ae99SBarry Smith PetscMPIInt rank; 100347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 100447c6ae99SBarry Smith 100547c6ae99SBarry Smith PetscFunctionBegin; 100647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 100706ebdd98SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(IS),is);CHKERRQ(ierr); 100847c6ae99SBarry Smith next = com->next; 100947c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 101047c6ae99SBarry Smith 101147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 101247c6ae99SBarry Smith while (next) { 101347c6ae99SBarry Smith ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 101447c6ae99SBarry Smith for (i=0; i<next->n; i++) idx[i] = next->grstart + i; 101547c6ae99SBarry Smith ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr); 101647c6ae99SBarry Smith cnt++; 101747c6ae99SBarry Smith next = next->next; 101847c6ae99SBarry Smith } 101947c6ae99SBarry Smith PetscFunctionReturn(0); 102047c6ae99SBarry Smith } 102147c6ae99SBarry Smith 102247c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 102347c6ae99SBarry Smith #undef __FUNCT__ 102447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_Array" 102547c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 102647c6ae99SBarry Smith { 102747c6ae99SBarry Smith PetscErrorCode ierr; 102847c6ae99SBarry Smith PetscFunctionBegin; 102947c6ae99SBarry Smith if (array) { 1030c72eef85SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),array);CHKERRQ(ierr); 103147c6ae99SBarry Smith } 103247c6ae99SBarry Smith PetscFunctionReturn(0); 103347c6ae99SBarry Smith } 103447c6ae99SBarry Smith 103547c6ae99SBarry Smith #undef __FUNCT__ 103647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_DM" 103747c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 103847c6ae99SBarry Smith { 103947c6ae99SBarry Smith PetscErrorCode ierr; 104047c6ae99SBarry Smith PetscFunctionBegin; 104147c6ae99SBarry Smith if (local) { 104247c6ae99SBarry Smith ierr = DMGetLocalVector(mine->dm,local);CHKERRQ(ierr); 104347c6ae99SBarry Smith } 104447c6ae99SBarry Smith PetscFunctionReturn(0); 104547c6ae99SBarry Smith } 104647c6ae99SBarry Smith 104747c6ae99SBarry Smith #undef __FUNCT__ 104847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_Array" 104947c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 105047c6ae99SBarry Smith { 105147c6ae99SBarry Smith PetscErrorCode ierr; 105247c6ae99SBarry Smith PetscFunctionBegin; 105347c6ae99SBarry Smith if (array) { 105447c6ae99SBarry Smith ierr = PetscFree(*array);CHKERRQ(ierr); 105547c6ae99SBarry Smith } 105647c6ae99SBarry Smith PetscFunctionReturn(0); 105747c6ae99SBarry Smith } 105847c6ae99SBarry Smith 105947c6ae99SBarry Smith #undef __FUNCT__ 106047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_DM" 106147c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 106247c6ae99SBarry Smith { 106347c6ae99SBarry Smith PetscErrorCode ierr; 106447c6ae99SBarry Smith PetscFunctionBegin; 106547c6ae99SBarry Smith if (local) { 106647c6ae99SBarry Smith ierr = DMRestoreLocalVector(mine->dm,local);CHKERRQ(ierr); 106747c6ae99SBarry Smith } 106847c6ae99SBarry Smith PetscFunctionReturn(0); 106947c6ae99SBarry Smith } 107047c6ae99SBarry Smith 107147c6ae99SBarry Smith #undef __FUNCT__ 107247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 107347c6ae99SBarry Smith /*@C 107447c6ae99SBarry Smith DMCompositeGetLocalVectors - Gets local vectors and arrays for each part of a DMComposite. 107547c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 107647c6ae99SBarry Smith 107747c6ae99SBarry Smith Not Collective 107847c6ae99SBarry Smith 107947c6ae99SBarry Smith Input Parameter: 108047c6ae99SBarry Smith . dm - the packer object 108147c6ae99SBarry Smith 108247c6ae99SBarry Smith Output Parameter: 108347c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 108447c6ae99SBarry Smith 108547c6ae99SBarry Smith Level: advanced 108647c6ae99SBarry Smith 10870c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 10886eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 108947c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 109047c6ae99SBarry Smith 109147c6ae99SBarry Smith @*/ 109247c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetLocalVectors(DM dm,...) 109347c6ae99SBarry Smith { 109447c6ae99SBarry Smith va_list Argp; 109547c6ae99SBarry Smith PetscErrorCode ierr; 109647c6ae99SBarry Smith struct DMCompositeLink *next; 109747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 109847c6ae99SBarry Smith 109947c6ae99SBarry Smith PetscFunctionBegin; 110047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 110147c6ae99SBarry Smith next = com->next; 110247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 110347c6ae99SBarry Smith va_start(Argp,dm); 110447c6ae99SBarry Smith while (next) { 110547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 110647c6ae99SBarry Smith PetscScalar **array; 110747c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 110847c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 110947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 111047c6ae99SBarry Smith Vec *vec; 111147c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 111247c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 111347c6ae99SBarry Smith } else { 111447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 111547c6ae99SBarry Smith } 111647c6ae99SBarry Smith next = next->next; 111747c6ae99SBarry Smith } 111847c6ae99SBarry Smith va_end(Argp); 111947c6ae99SBarry Smith PetscFunctionReturn(0); 112047c6ae99SBarry Smith } 112147c6ae99SBarry Smith 112247c6ae99SBarry Smith #undef __FUNCT__ 112347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 112447c6ae99SBarry Smith /*@C 112547c6ae99SBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors and arrays for each part of a DMComposite. 112647c6ae99SBarry Smith 112747c6ae99SBarry Smith Not Collective 112847c6ae99SBarry Smith 112947c6ae99SBarry Smith Input Parameter: 113047c6ae99SBarry Smith . dm - the packer object 113147c6ae99SBarry Smith 113247c6ae99SBarry Smith Output Parameter: 113347c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 113447c6ae99SBarry Smith 113547c6ae99SBarry Smith Level: advanced 113647c6ae99SBarry Smith 11370c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 11386eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 113947c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 114047c6ae99SBarry Smith 114147c6ae99SBarry Smith @*/ 114247c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeRestoreLocalVectors(DM dm,...) 114347c6ae99SBarry Smith { 114447c6ae99SBarry Smith va_list Argp; 114547c6ae99SBarry Smith PetscErrorCode ierr; 114647c6ae99SBarry Smith struct DMCompositeLink *next; 114747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 114847c6ae99SBarry Smith 114947c6ae99SBarry Smith PetscFunctionBegin; 115047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 115147c6ae99SBarry Smith next = com->next; 115247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 115347c6ae99SBarry Smith va_start(Argp,dm); 115447c6ae99SBarry Smith while (next) { 115547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 115647c6ae99SBarry Smith PetscScalar **array; 115747c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 115847c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 115947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 116047c6ae99SBarry Smith Vec *vec; 116147c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 116247c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 116347c6ae99SBarry Smith } else { 116447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 116547c6ae99SBarry Smith } 116647c6ae99SBarry Smith next = next->next; 116747c6ae99SBarry Smith } 116847c6ae99SBarry Smith va_end(Argp); 116947c6ae99SBarry Smith PetscFunctionReturn(0); 117047c6ae99SBarry Smith } 117147c6ae99SBarry Smith 117247c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 117347c6ae99SBarry Smith #undef __FUNCT__ 117447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_Array" 117547c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_Array(DM dm,struct DMCompositeLink *mine,PetscInt *n) 117647c6ae99SBarry Smith { 117747c6ae99SBarry Smith PetscFunctionBegin; 117806ebdd98SJed Brown if (n) *n = mine->nlocal; 117947c6ae99SBarry Smith PetscFunctionReturn(0); 118047c6ae99SBarry Smith } 118147c6ae99SBarry Smith 118247c6ae99SBarry Smith #undef __FUNCT__ 118347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_DM" 118447c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_DM(DM dmi,struct DMCompositeLink *mine,DM *dm) 118547c6ae99SBarry Smith { 118647c6ae99SBarry Smith PetscFunctionBegin; 118747c6ae99SBarry Smith if (dm) *dm = mine->dm; 118847c6ae99SBarry Smith PetscFunctionReturn(0); 118947c6ae99SBarry Smith } 119047c6ae99SBarry Smith 119147c6ae99SBarry Smith #undef __FUNCT__ 119247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 119347c6ae99SBarry Smith /*@C 1194aa219208SBarry Smith DMCompositeGetEntries - Gets the DM, redundant size, etc for each entry in a DMComposite. 119547c6ae99SBarry Smith 119647c6ae99SBarry Smith Not Collective 119747c6ae99SBarry Smith 119847c6ae99SBarry Smith Input Parameter: 119947c6ae99SBarry Smith . dm - the packer object 120047c6ae99SBarry Smith 120147c6ae99SBarry Smith Output Parameter: 1202aa219208SBarry Smith . ... - the individual entries, DMs or integer sizes) 120347c6ae99SBarry Smith 120447c6ae99SBarry Smith Level: advanced 120547c6ae99SBarry Smith 12060c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 12076eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 120847c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 120947c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 121047c6ae99SBarry Smith 121147c6ae99SBarry Smith @*/ 121247c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetEntries(DM dm,...) 121347c6ae99SBarry Smith { 121447c6ae99SBarry Smith va_list Argp; 121547c6ae99SBarry Smith PetscErrorCode ierr; 121647c6ae99SBarry Smith struct DMCompositeLink *next; 121747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 121847c6ae99SBarry Smith 121947c6ae99SBarry Smith PetscFunctionBegin; 122047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 122147c6ae99SBarry Smith next = com->next; 122247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 122347c6ae99SBarry Smith va_start(Argp,dm); 122447c6ae99SBarry Smith while (next) { 122547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 122647c6ae99SBarry Smith PetscInt *n; 122747c6ae99SBarry Smith n = va_arg(Argp, PetscInt*); 122847c6ae99SBarry Smith ierr = DMCompositeGetEntries_Array(dm,next,n);CHKERRQ(ierr); 122947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 123047c6ae99SBarry Smith DM *dmn; 123147c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 123247c6ae99SBarry Smith ierr = DMCompositeGetEntries_DM(dm,next,dmn);CHKERRQ(ierr); 123347c6ae99SBarry Smith } else { 123447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 123547c6ae99SBarry Smith } 123647c6ae99SBarry Smith next = next->next; 123747c6ae99SBarry Smith } 123847c6ae99SBarry Smith va_end(Argp); 123947c6ae99SBarry Smith PetscFunctionReturn(0); 124047c6ae99SBarry Smith } 124147c6ae99SBarry Smith 124247c6ae99SBarry Smith #undef __FUNCT__ 12430c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 12440c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 124547c6ae99SBarry Smith { 124647c6ae99SBarry Smith PetscErrorCode ierr; 124747c6ae99SBarry Smith struct DMCompositeLink *next; 124847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 124947c6ae99SBarry Smith DM dm; 125047c6ae99SBarry Smith 125147c6ae99SBarry Smith PetscFunctionBegin; 125247c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 125347c6ae99SBarry Smith next = com->next; 125447c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 125547c6ae99SBarry Smith 125647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 125747c6ae99SBarry Smith while (next) { 125847c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 125906ebdd98SJed Brown ierr = DMCompositeAddArray(*fine,next->rank,next->nlocal);CHKERRQ(ierr); 126047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 126147c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 126247c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 126347c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 126447c6ae99SBarry Smith } else { 126547c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 126647c6ae99SBarry Smith } 126747c6ae99SBarry Smith next = next->next; 126847c6ae99SBarry Smith } 126947c6ae99SBarry Smith PetscFunctionReturn(0); 127047c6ae99SBarry Smith } 127147c6ae99SBarry Smith 127247c6ae99SBarry Smith #include "petscmat.h" 127347c6ae99SBarry Smith 127447c6ae99SBarry Smith struct MatPackLink { 127547c6ae99SBarry Smith Mat A; 127647c6ae99SBarry Smith struct MatPackLink *next; 127747c6ae99SBarry Smith }; 127847c6ae99SBarry Smith 127947c6ae99SBarry Smith struct MatPack { 128047c6ae99SBarry Smith DM right,left; 128147c6ae99SBarry Smith struct MatPackLink *next; 128247c6ae99SBarry Smith }; 128347c6ae99SBarry Smith 128447c6ae99SBarry Smith #undef __FUNCT__ 128547c6ae99SBarry Smith #define __FUNCT__ "MatMultBoth_Shell_Pack" 128647c6ae99SBarry Smith PetscErrorCode MatMultBoth_Shell_Pack(Mat A,Vec x,Vec y,PetscBool add) 128747c6ae99SBarry Smith { 128847c6ae99SBarry Smith struct MatPack *mpack; 128947c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 129047c6ae99SBarry Smith struct MatPackLink *anext; 129147c6ae99SBarry Smith PetscScalar *xarray,*yarray; 129247c6ae99SBarry Smith PetscErrorCode ierr; 129347c6ae99SBarry Smith PetscInt i; 129447c6ae99SBarry Smith Vec xglobal,yglobal; 129547c6ae99SBarry Smith PetscMPIInt rank; 129647c6ae99SBarry Smith DM_Composite *comright; 129747c6ae99SBarry Smith DM_Composite *comleft; 129847c6ae99SBarry Smith 129947c6ae99SBarry Smith PetscFunctionBegin; 130047c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 130147c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 130247c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 130347c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 130447c6ae99SBarry Smith xnext = comright->next; 130547c6ae99SBarry Smith ynext = comleft->next; 130647c6ae99SBarry Smith anext = mpack->next; 130747c6ae99SBarry Smith 130847c6ae99SBarry Smith while (xnext) { 130947c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 131047c6ae99SBarry Smith if (rank == xnext->rank) { 131147c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 131247c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 131347c6ae99SBarry Smith if (add) { 131447c6ae99SBarry Smith for (i=0; i<xnext->n; i++) { 131547c6ae99SBarry Smith yarray[ynext->rstart+i] += xarray[xnext->rstart+i]; 131647c6ae99SBarry Smith } 131747c6ae99SBarry Smith } else { 131847c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 131947c6ae99SBarry Smith } 132047c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 132147c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 132247c6ae99SBarry Smith } 132347c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 132447c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 132547c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 132647c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 132747c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 132847c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 132947c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 133047c6ae99SBarry Smith if (add) { 133147c6ae99SBarry Smith ierr = MatMultAdd(anext->A,xglobal,yglobal,yglobal);CHKERRQ(ierr); 133247c6ae99SBarry Smith } else { 133347c6ae99SBarry Smith ierr = MatMult(anext->A,xglobal,yglobal);CHKERRQ(ierr); 133447c6ae99SBarry Smith } 133547c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 133647c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 133747c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 133847c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 133947c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 134047c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 134147c6ae99SBarry Smith anext = anext->next; 134247c6ae99SBarry Smith } else { 134347c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 134447c6ae99SBarry Smith } 134547c6ae99SBarry Smith xnext = xnext->next; 134647c6ae99SBarry Smith ynext = ynext->next; 134747c6ae99SBarry Smith } 134847c6ae99SBarry Smith PetscFunctionReturn(0); 134947c6ae99SBarry Smith } 135047c6ae99SBarry Smith 135147c6ae99SBarry Smith #undef __FUNCT__ 135247c6ae99SBarry Smith #define __FUNCT__ "MatMultAdd_Shell_Pack" 135347c6ae99SBarry Smith PetscErrorCode MatMultAdd_Shell_Pack(Mat A,Vec x,Vec y,Vec z) 135447c6ae99SBarry Smith { 135547c6ae99SBarry Smith PetscErrorCode ierr; 135647c6ae99SBarry Smith PetscFunctionBegin; 135747c6ae99SBarry Smith if (z != y) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Handles y == z only"); 135847c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_TRUE);CHKERRQ(ierr); 135947c6ae99SBarry Smith PetscFunctionReturn(0); 136047c6ae99SBarry Smith } 136147c6ae99SBarry Smith 136247c6ae99SBarry Smith #undef __FUNCT__ 136347c6ae99SBarry Smith #define __FUNCT__ "MatMult_Shell_Pack" 136447c6ae99SBarry Smith PetscErrorCode MatMult_Shell_Pack(Mat A,Vec x,Vec y) 136547c6ae99SBarry Smith { 136647c6ae99SBarry Smith PetscErrorCode ierr; 136747c6ae99SBarry Smith PetscFunctionBegin; 136847c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_FALSE);CHKERRQ(ierr); 136947c6ae99SBarry Smith PetscFunctionReturn(0); 137047c6ae99SBarry Smith } 137147c6ae99SBarry Smith 137247c6ae99SBarry Smith #undef __FUNCT__ 137347c6ae99SBarry Smith #define __FUNCT__ "MatMultTranspose_Shell_Pack" 137447c6ae99SBarry Smith PetscErrorCode MatMultTranspose_Shell_Pack(Mat A,Vec x,Vec y) 137547c6ae99SBarry Smith { 137647c6ae99SBarry Smith struct MatPack *mpack; 137747c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 137847c6ae99SBarry Smith struct MatPackLink *anext; 137947c6ae99SBarry Smith PetscScalar *xarray,*yarray; 138047c6ae99SBarry Smith PetscErrorCode ierr; 138147c6ae99SBarry Smith Vec xglobal,yglobal; 138247c6ae99SBarry Smith PetscMPIInt rank; 138347c6ae99SBarry Smith DM_Composite *comright; 138447c6ae99SBarry Smith DM_Composite *comleft; 138547c6ae99SBarry Smith 138647c6ae99SBarry Smith PetscFunctionBegin; 138747c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 138847c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 138947c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 139047c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 139147c6ae99SBarry Smith ynext = comright->next; 139247c6ae99SBarry Smith xnext = comleft->next; 139347c6ae99SBarry Smith anext = mpack->next; 139447c6ae99SBarry Smith 139547c6ae99SBarry Smith while (xnext) { 139647c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 139747c6ae99SBarry Smith if (rank == ynext->rank) { 139847c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 139947c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 140047c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 140147c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 140247c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 140347c6ae99SBarry Smith } 140447c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 140547c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 140647c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 140747c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 140847c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 140947c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 141047c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 141147c6ae99SBarry Smith ierr = MatMultTranspose(anext->A,xglobal,yglobal);CHKERRQ(ierr); 141247c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 141347c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 141447c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 141547c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 141647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 141747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 141847c6ae99SBarry Smith anext = anext->next; 141947c6ae99SBarry Smith } else { 142047c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 142147c6ae99SBarry Smith } 142247c6ae99SBarry Smith xnext = xnext->next; 142347c6ae99SBarry Smith ynext = ynext->next; 142447c6ae99SBarry Smith } 142547c6ae99SBarry Smith PetscFunctionReturn(0); 142647c6ae99SBarry Smith } 142747c6ae99SBarry Smith 142847c6ae99SBarry Smith #undef __FUNCT__ 142947c6ae99SBarry Smith #define __FUNCT__ "MatDestroy_Shell_Pack" 143047c6ae99SBarry Smith PetscErrorCode MatDestroy_Shell_Pack(Mat A) 143147c6ae99SBarry Smith { 143247c6ae99SBarry Smith struct MatPack *mpack; 143347c6ae99SBarry Smith struct MatPackLink *anext,*oldanext; 143447c6ae99SBarry Smith PetscErrorCode ierr; 143547c6ae99SBarry Smith 143647c6ae99SBarry Smith PetscFunctionBegin; 143747c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 143847c6ae99SBarry Smith anext = mpack->next; 143947c6ae99SBarry Smith 144047c6ae99SBarry Smith while (anext) { 144147c6ae99SBarry Smith ierr = MatDestroy(anext->A);CHKERRQ(ierr); 144247c6ae99SBarry Smith oldanext = anext; 144347c6ae99SBarry Smith anext = anext->next; 144447c6ae99SBarry Smith ierr = PetscFree(oldanext);CHKERRQ(ierr); 144547c6ae99SBarry Smith } 144647c6ae99SBarry Smith ierr = PetscFree(mpack);CHKERRQ(ierr); 144747c6ae99SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 144847c6ae99SBarry Smith PetscFunctionReturn(0); 144947c6ae99SBarry Smith } 145047c6ae99SBarry Smith 145147c6ae99SBarry Smith #undef __FUNCT__ 14520c010503SBarry Smith #define __FUNCT__ "DMGetInterpolation_Composite" 14530c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 145447c6ae99SBarry Smith { 145547c6ae99SBarry Smith PetscErrorCode ierr; 145647c6ae99SBarry Smith PetscInt m,n,M,N; 145747c6ae99SBarry Smith struct DMCompositeLink *nextc; 145847c6ae99SBarry Smith struct DMCompositeLink *nextf; 145947c6ae99SBarry Smith struct MatPackLink *nextmat,*pnextmat = 0; 146047c6ae99SBarry Smith struct MatPack *mpack; 146147c6ae99SBarry Smith Vec gcoarse,gfine; 146247c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 146347c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 146447c6ae99SBarry Smith 146547c6ae99SBarry Smith PetscFunctionBegin; 146647c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 146747c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 146847c6ae99SBarry Smith nextc = comcoarse->next; 146947c6ae99SBarry Smith nextf = comfine->next; 147047c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14710c010503SBarry Smith ierr = DMCreateGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 14720c010503SBarry Smith ierr = DMCreateGlobalVector(fine,&gfine);CHKERRQ(ierr); 147347c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 147447c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 147547c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 147647c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 147747c6ae99SBarry Smith ierr = VecDestroy(gcoarse);CHKERRQ(ierr); 147847c6ae99SBarry Smith ierr = VecDestroy(gfine);CHKERRQ(ierr); 147947c6ae99SBarry Smith 148047c6ae99SBarry Smith ierr = PetscNew(struct MatPack,&mpack);CHKERRQ(ierr); 148147c6ae99SBarry Smith mpack->right = coarse; 148247c6ae99SBarry Smith mpack->left = fine; 148347c6ae99SBarry Smith ierr = MatCreate(((PetscObject)fine)->comm,A);CHKERRQ(ierr); 148447c6ae99SBarry Smith ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr); 148547c6ae99SBarry Smith ierr = MatSetType(*A,MATSHELL);CHKERRQ(ierr); 148647c6ae99SBarry Smith ierr = MatShellSetContext(*A,mpack);CHKERRQ(ierr); 148747c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT,(void(*)(void))MatMult_Shell_Pack);CHKERRQ(ierr); 148847c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_TRANSPOSE,(void(*)(void))MatMultTranspose_Shell_Pack);CHKERRQ(ierr); 148947c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_ADD,(void(*)(void))MatMultAdd_Shell_Pack);CHKERRQ(ierr); 149047c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_DESTROY,(void(*)(void))MatDestroy_Shell_Pack);CHKERRQ(ierr); 149147c6ae99SBarry Smith 149247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 149347c6ae99SBarry Smith while (nextc) { 149447c6ae99SBarry Smith if (nextc->type != nextf->type) SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_ARG_INCOMP,"Two DM have different layout"); 149547c6ae99SBarry Smith 149647c6ae99SBarry Smith if (nextc->type == DMCOMPOSITE_ARRAY) { 149747c6ae99SBarry Smith ; 149847c6ae99SBarry Smith } else if (nextc->type == DMCOMPOSITE_DM) { 149947c6ae99SBarry Smith ierr = PetscNew(struct MatPackLink,&nextmat);CHKERRQ(ierr); 150047c6ae99SBarry Smith nextmat->next = 0; 150147c6ae99SBarry Smith if (pnextmat) { 150247c6ae99SBarry Smith pnextmat->next = nextmat; 150347c6ae99SBarry Smith pnextmat = nextmat; 150447c6ae99SBarry Smith } else { 150547c6ae99SBarry Smith pnextmat = nextmat; 150647c6ae99SBarry Smith mpack->next = nextmat; 150747c6ae99SBarry Smith } 150847c6ae99SBarry Smith ierr = DMGetInterpolation(nextc->dm,nextf->dm,&nextmat->A,PETSC_NULL);CHKERRQ(ierr); 150947c6ae99SBarry Smith } else { 151047c6ae99SBarry Smith SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 151147c6ae99SBarry Smith } 151247c6ae99SBarry Smith nextc = nextc->next; 151347c6ae99SBarry Smith nextf = nextf->next; 151447c6ae99SBarry Smith } 151547c6ae99SBarry Smith PetscFunctionReturn(0); 151647c6ae99SBarry Smith } 151747c6ae99SBarry Smith 151847c6ae99SBarry Smith #undef __FUNCT__ 15191411c6eeSJed Brown #define __FUNCT__ "DMCreateLocalToGlobalMapping_Composite" 15201411c6eeSJed Brown static PetscErrorCode DMCreateLocalToGlobalMapping_Composite(DM dm) 15211411c6eeSJed Brown { 15221411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 15231411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1524a03f9cedSJed Brown PetscInt i,cnt,m,*idx; 15251411c6eeSJed Brown PetscErrorCode ierr; 15261411c6eeSJed Brown 15271411c6eeSJed Brown PetscFunctionBegin; 15281411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 15291411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 15301411c6eeSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 1531a03f9cedSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 1532a03f9cedSJed Brown cnt += m; 1533a03f9cedSJed Brown } 1534a03f9cedSJed Brown ierr = PetscMalloc(cnt*sizeof(PetscInt),&idx);CHKERRQ(ierr); 1535a03f9cedSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 15361411c6eeSJed Brown const PetscInt *subidx; 15371411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 15381411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15391411c6eeSJed Brown ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr); 15401411c6eeSJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15411411c6eeSJed Brown cnt += m; 15421411c6eeSJed Brown } 15431411c6eeSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,cnt,idx,PETSC_OWN_POINTER,&dm->ltogmap);CHKERRQ(ierr); 15441411c6eeSJed Brown for (i=0; i<com->nDM+com->nredundant; i++) {ierr = ISLocalToGlobalMappingDestroy(ltogs[i]);CHKERRQ(ierr);} 15451411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 15461411c6eeSJed Brown PetscFunctionReturn(0); 15471411c6eeSJed Brown } 15481411c6eeSJed Brown 15491411c6eeSJed Brown 15501411c6eeSJed Brown #undef __FUNCT__ 15510c010503SBarry Smith #define __FUNCT__ "DMGetColoring_Composite" 15520c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetColoring_Composite(DM dm,ISColoringType ctype,const MatType mtype,ISColoring *coloring) 155347c6ae99SBarry Smith { 155447c6ae99SBarry Smith PetscErrorCode ierr; 155547c6ae99SBarry Smith PetscInt n,i,cnt; 155647c6ae99SBarry Smith ISColoringValue *colors; 155747c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 155847c6ae99SBarry Smith ISColoringValue maxcol = 0; 155947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 156047c6ae99SBarry Smith 156147c6ae99SBarry Smith PetscFunctionBegin; 156247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 156347c6ae99SBarry Smith if (ctype == IS_COLORING_GHOSTED) { 156447c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Currently you must use -dmmg_iscoloring_type global" ); 156547c6ae99SBarry Smith } else if (ctype == IS_COLORING_GLOBAL) { 156647c6ae99SBarry Smith n = com->n; 156747c6ae99SBarry Smith } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 156847c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 156947c6ae99SBarry Smith 1570671f6225SBarry Smith ierr = PetscOptionsGetBool(PETSC_NULL,"-dmcomposite_dense_jacobian",&dense,PETSC_NULL);CHKERRQ(ierr); 157147c6ae99SBarry Smith if (dense) { 157247c6ae99SBarry Smith for (i=0; i<n; i++) { 157347c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 157447c6ae99SBarry Smith } 157547c6ae99SBarry Smith maxcol = com->N; 157647c6ae99SBarry Smith } else { 157747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 157847c6ae99SBarry Smith PetscMPIInt rank; 157947c6ae99SBarry Smith 158047c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 158147c6ae99SBarry Smith cnt = 0; 158247c6ae99SBarry Smith while (next) { 158347c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 158447c6ae99SBarry Smith if (rank == next->rank) { /* each column gets is own color */ 158547c6ae99SBarry Smith for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) { 158647c6ae99SBarry Smith colors[cnt++] = maxcol++; 158747c6ae99SBarry Smith } 158847c6ae99SBarry Smith } 158947c6ae99SBarry Smith ierr = MPI_Bcast(&maxcol,1,MPIU_COLORING_VALUE,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 159047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 159147c6ae99SBarry Smith ISColoring lcoloring; 159247c6ae99SBarry Smith 159347c6ae99SBarry Smith ierr = DMGetColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr); 159447c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 159547c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 159647c6ae99SBarry Smith } 159747c6ae99SBarry Smith maxcol += lcoloring->n; 159847c6ae99SBarry Smith ierr = ISColoringDestroy(lcoloring);CHKERRQ(ierr); 159947c6ae99SBarry Smith } else { 160047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 160147c6ae99SBarry Smith } 160247c6ae99SBarry Smith next = next->next; 160347c6ae99SBarry Smith } 160447c6ae99SBarry Smith } 160547c6ae99SBarry Smith ierr = ISColoringCreate(((PetscObject)dm)->comm,maxcol,n,colors,coloring);CHKERRQ(ierr); 160647c6ae99SBarry Smith PetscFunctionReturn(0); 160747c6ae99SBarry Smith } 160847c6ae99SBarry Smith 160947c6ae99SBarry Smith #undef __FUNCT__ 16100c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 16110c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 161247c6ae99SBarry Smith { 161347c6ae99SBarry Smith PetscErrorCode ierr; 161447c6ae99SBarry Smith struct DMCompositeLink *next; 161547c6ae99SBarry Smith PetscInt cnt = 3; 161647c6ae99SBarry Smith PetscMPIInt rank; 161747c6ae99SBarry Smith PetscScalar *garray,*larray; 161847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 161947c6ae99SBarry Smith 162047c6ae99SBarry Smith PetscFunctionBegin; 162147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 162247c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 162347c6ae99SBarry Smith next = com->next; 162447c6ae99SBarry Smith if (!com->setup) { 1625d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 162647c6ae99SBarry Smith } 162747c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 162847c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 162947c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 163047c6ae99SBarry Smith 163147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 163247c6ae99SBarry Smith while (next) { 163347c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 163447c6ae99SBarry Smith if (rank == next->rank) { 163547c6ae99SBarry Smith ierr = PetscMemcpy(larray,garray,next->n*sizeof(PetscScalar));CHKERRQ(ierr); 163647c6ae99SBarry Smith garray += next->n; 163747c6ae99SBarry Smith } 163847c6ae99SBarry Smith /* does not handle ADD_VALUES */ 163906ebdd98SJed Brown ierr = MPI_Bcast(larray,next->nlocal,MPIU_SCALAR,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 164047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 164147c6ae99SBarry Smith Vec local,global; 164247c6ae99SBarry Smith PetscInt N; 164347c6ae99SBarry Smith 164447c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 164547c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 164647c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 164747c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 164847c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 164947c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 165047c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 165147c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 165247c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 165347c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 165447c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 165547c6ae99SBarry Smith } else { 165647c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 165747c6ae99SBarry Smith } 165847c6ae99SBarry Smith cnt++; 165906ebdd98SJed Brown larray += next->nlocal; 166047c6ae99SBarry Smith next = next->next; 166147c6ae99SBarry Smith } 166247c6ae99SBarry Smith 166347c6ae99SBarry Smith ierr = VecRestoreArray(gvec,PETSC_NULL);CHKERRQ(ierr); 166447c6ae99SBarry Smith ierr = VecRestoreArray(lvec,PETSC_NULL);CHKERRQ(ierr); 166547c6ae99SBarry Smith PetscFunctionReturn(0); 166647c6ae99SBarry Smith } 166747c6ae99SBarry Smith 166847c6ae99SBarry Smith #undef __FUNCT__ 16690c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 16700c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 16710c010503SBarry Smith { 16720c010503SBarry Smith PetscFunctionBegin; 16730c010503SBarry Smith PetscFunctionReturn(0); 16740c010503SBarry Smith } 167547c6ae99SBarry Smith 1676a4121054SBarry Smith EXTERN_C_BEGIN 1677a4121054SBarry Smith #undef __FUNCT__ 1678a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 1679a4121054SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCreate_Composite(DM p) 1680a4121054SBarry Smith { 1681a4121054SBarry Smith PetscErrorCode ierr; 1682a4121054SBarry Smith DM_Composite *com; 1683a4121054SBarry Smith 1684a4121054SBarry Smith PetscFunctionBegin; 1685a4121054SBarry Smith ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr); 1686a4121054SBarry Smith p->data = com; 1687a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1688a4121054SBarry Smith com->n = 0; 1689a4121054SBarry Smith com->next = PETSC_NULL; 1690a4121054SBarry Smith com->nredundant = 0; 1691a4121054SBarry Smith com->nDM = 0; 1692a4121054SBarry Smith 1693a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1694a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 16951411c6eeSJed Brown p->ops->createlocaltoglobalmapping = DMCreateLocalToGlobalMapping_Composite; 16961411c6eeSJed Brown p->ops->createlocaltoglobalmappingblock = 0; 1697a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 1698a4121054SBarry Smith p->ops->getinterpolation = DMGetInterpolation_Composite; 1699a4121054SBarry Smith p->ops->getmatrix = DMGetMatrix_Composite; 1700a4121054SBarry Smith p->ops->getcoloring = DMGetColoring_Composite; 1701a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1702a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1703a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1704a4121054SBarry Smith p->ops->view = DMView_Composite; 1705a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1706a4121054SBarry Smith PetscFunctionReturn(0); 1707a4121054SBarry Smith } 1708a4121054SBarry Smith EXTERN_C_END 1709a4121054SBarry Smith 17100c010503SBarry Smith #undef __FUNCT__ 17110c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 17120c010503SBarry Smith /*@C 17130c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 17140c010503SBarry Smith vectors made up of several subvectors. 17150c010503SBarry Smith 17160c010503SBarry Smith Collective on MPI_Comm 171747c6ae99SBarry Smith 171847c6ae99SBarry Smith Input Parameter: 17190c010503SBarry Smith . comm - the processors that will share the global vector 17200c010503SBarry Smith 17210c010503SBarry Smith Output Parameters: 17220c010503SBarry Smith . packer - the packer object 172347c6ae99SBarry Smith 172447c6ae99SBarry Smith Level: advanced 172547c6ae99SBarry Smith 17260c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCompositeScatter(), 17276eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 172847c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 172947c6ae99SBarry Smith 173047c6ae99SBarry Smith @*/ 17310c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeCreate(MPI_Comm comm,DM *packer) 173247c6ae99SBarry Smith { 17330c010503SBarry Smith PetscErrorCode ierr; 17340c010503SBarry Smith 173547c6ae99SBarry Smith PetscFunctionBegin; 17360c010503SBarry Smith PetscValidPointer(packer,2); 1737a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1738a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 173947c6ae99SBarry Smith PetscFunctionReturn(0); 174047c6ae99SBarry Smith } 1741