147c6ae99SBarry Smith 2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 30f21e855SMatthew G. Knepley #include <petscproblem.h> 447c6ae99SBarry Smith 547c6ae99SBarry Smith #undef __FUNCT__ 647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 747c6ae99SBarry Smith /*@C 847c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 99ae5db72SJed Brown seperate components (DMs) in a DMto build the correct matrix nonzero structure. 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith 1247c6ae99SBarry Smith Logically Collective on MPI_Comm 1347c6ae99SBarry Smith 1447c6ae99SBarry Smith Input Parameter: 1547c6ae99SBarry Smith + dm - the composite object 1647c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1747c6ae99SBarry Smith 1847c6ae99SBarry Smith Level: advanced 1947c6ae99SBarry Smith 201b2093e4SBarry Smith Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into 2147c6ae99SBarry Smith this routine 2247c6ae99SBarry Smith 2347c6ae99SBarry Smith @*/ 247087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2547c6ae99SBarry Smith { 2647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2747c6ae99SBarry Smith 2847c6ae99SBarry Smith PetscFunctionBegin; 2947c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 3047c6ae99SBarry Smith PetscFunctionReturn(0); 3147c6ae99SBarry Smith } 3247c6ae99SBarry Smith 3347c6ae99SBarry Smith #undef __FUNCT__ 340c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 356bf464f9SBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 3647c6ae99SBarry Smith { 3747c6ae99SBarry Smith PetscErrorCode ierr; 3847c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith PetscFunctionBegin; 4247c6ae99SBarry Smith next = com->next; 4347c6ae99SBarry Smith while (next) { 4447c6ae99SBarry Smith prev = next; 4547c6ae99SBarry Smith next = next->next; 46fcfd50ebSBarry Smith ierr = DMDestroy(&prev->dm);CHKERRQ(ierr); 4747c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 4847c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 4947c6ae99SBarry Smith } 50435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 51435a35e8SMatthew G Knepley ierr = PetscFree(com);CHKERRQ(ierr); 5247c6ae99SBarry Smith PetscFunctionReturn(0); 5347c6ae99SBarry Smith } 5447c6ae99SBarry Smith 5547c6ae99SBarry Smith #undef __FUNCT__ 560c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 577087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 5847c6ae99SBarry Smith { 5947c6ae99SBarry Smith PetscErrorCode ierr; 6047c6ae99SBarry Smith PetscBool iascii; 6147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 6247c6ae99SBarry Smith 6347c6ae99SBarry Smith PetscFunctionBegin; 64251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 6547c6ae99SBarry Smith if (iascii) { 6647c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6747c6ae99SBarry Smith PetscInt i; 6847c6ae99SBarry Smith 6947c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr); 709ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v," contains %D DMs\n",com->nDM);CHKERRQ(ierr); 7147c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7247c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 739ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 7447c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7547c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 7647c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7747c6ae99SBarry Smith } 7847c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7947c6ae99SBarry Smith } 8047c6ae99SBarry Smith PetscFunctionReturn(0); 8147c6ae99SBarry Smith } 8247c6ae99SBarry Smith 8347c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8447c6ae99SBarry Smith #undef __FUNCT__ 85d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 867087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 8747c6ae99SBarry Smith { 8847c6ae99SBarry Smith PetscErrorCode ierr; 8947c6ae99SBarry Smith PetscInt nprev = 0; 9047c6ae99SBarry Smith PetscMPIInt rank,size; 9147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 9247c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 9347c6ae99SBarry Smith PetscLayout map; 9447c6ae99SBarry Smith 9547c6ae99SBarry Smith PetscFunctionBegin; 96ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 97ce94432eSBarry Smith ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr); 9847c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 9947c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 10047c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 10147c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 10247c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 1030298fd71SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr); 104fcfd50ebSBarry Smith ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr); 10547c6ae99SBarry Smith 1069ae5db72SJed Brown /* now set the rstart for each linked vector */ 107ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 108ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr); 10947c6ae99SBarry Smith while (next) { 11047c6ae99SBarry Smith next->rstart = nprev; 11106ebdd98SJed Brown nprev += next->n; 11247c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 113785e854fSJed Brown ierr = PetscMalloc1(size,&next->grstarts);CHKERRQ(ierr); 114ce94432eSBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 11547c6ae99SBarry Smith next = next->next; 11647c6ae99SBarry Smith } 11747c6ae99SBarry Smith com->setup = PETSC_TRUE; 11847c6ae99SBarry Smith PetscFunctionReturn(0); 11947c6ae99SBarry Smith } 12047c6ae99SBarry Smith 12147c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 12247c6ae99SBarry Smith 12347c6ae99SBarry Smith #undef __FUNCT__ 12447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 12573e31fe2SJed Brown /*@ 12647c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 12747c6ae99SBarry Smith representation. 12847c6ae99SBarry Smith 12947c6ae99SBarry Smith Not Collective 13047c6ae99SBarry Smith 13147c6ae99SBarry Smith Input Parameter: 13247c6ae99SBarry Smith . dm - the packer object 13347c6ae99SBarry Smith 13447c6ae99SBarry Smith Output Parameter: 13547c6ae99SBarry Smith . nDM - the number of DMs 13647c6ae99SBarry Smith 13747c6ae99SBarry Smith Level: beginner 13847c6ae99SBarry Smith 13947c6ae99SBarry Smith @*/ 1407087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 14147c6ae99SBarry Smith { 14247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 1435fd66863SKarl Rupp 14447c6ae99SBarry Smith PetscFunctionBegin; 14547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 14647c6ae99SBarry Smith *nDM = com->nDM; 14747c6ae99SBarry Smith PetscFunctionReturn(0); 14847c6ae99SBarry Smith } 14947c6ae99SBarry Smith 15047c6ae99SBarry Smith 15147c6ae99SBarry Smith #undef __FUNCT__ 15247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 15347c6ae99SBarry Smith /*@C 15447c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 15547c6ae99SBarry Smith representation. 15647c6ae99SBarry Smith 15747c6ae99SBarry Smith Collective on DMComposite 15847c6ae99SBarry Smith 1599ae5db72SJed Brown Input Parameters: 16047c6ae99SBarry Smith + dm - the packer object 1619ae5db72SJed Brown - gvec - the global vector 1629ae5db72SJed Brown 1639ae5db72SJed Brown Output Parameters: 1640298fd71SBarry Smith . Vec* ... - the packed parallel vectors, NULL for those that are not needed 16547c6ae99SBarry Smith 16647c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 16747c6ae99SBarry Smith 168f73e5cebSJed Brown Fortran Notes: 169f73e5cebSJed Brown 170f73e5cebSJed Brown Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 171f73e5cebSJed Brown or use the alternative interface DMCompositeGetAccessArray(). 172f73e5cebSJed Brown 17347c6ae99SBarry Smith Level: advanced 17447c6ae99SBarry Smith 175f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter() 17647c6ae99SBarry Smith @*/ 1777087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 17847c6ae99SBarry Smith { 17947c6ae99SBarry Smith va_list Argp; 18047c6ae99SBarry Smith PetscErrorCode ierr; 18147c6ae99SBarry Smith struct DMCompositeLink *next; 18247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 18347c6ae99SBarry Smith 18447c6ae99SBarry Smith PetscFunctionBegin; 18547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 18647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 18747c6ae99SBarry Smith next = com->next; 18847c6ae99SBarry Smith if (!com->setup) { 189d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 19047c6ae99SBarry Smith } 19147c6ae99SBarry Smith 19247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 19347c6ae99SBarry Smith va_start(Argp,gvec); 19447c6ae99SBarry Smith while (next) { 19547c6ae99SBarry Smith Vec *vec; 19647c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 1979ae5db72SJed Brown if (vec) { 1989ae5db72SJed Brown PetscScalar *array; 1999ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr); 2009ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 2019ae5db72SJed Brown ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr); 2029ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 20347c6ae99SBarry Smith } 20447c6ae99SBarry Smith next = next->next; 20547c6ae99SBarry Smith } 20647c6ae99SBarry Smith va_end(Argp); 20747c6ae99SBarry Smith PetscFunctionReturn(0); 20847c6ae99SBarry Smith } 20947c6ae99SBarry Smith 21047c6ae99SBarry Smith #undef __FUNCT__ 211f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray" 212f73e5cebSJed Brown /*@C 213f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 214f73e5cebSJed Brown representation. 215f73e5cebSJed Brown 216f73e5cebSJed Brown Collective on DMComposite 217f73e5cebSJed Brown 218f73e5cebSJed Brown Input Parameters: 219f73e5cebSJed Brown + dm - the packer object 220f73e5cebSJed Brown . pvec - packed vector 221f73e5cebSJed Brown . nwanted - number of vectors wanted 2220298fd71SBarry Smith - wanted - sorted array of vectors wanted, or NULL to get all vectors 223f73e5cebSJed Brown 224f73e5cebSJed Brown Output Parameters: 225f73e5cebSJed Brown . vecs - array of requested global vectors (must be allocated) 226f73e5cebSJed Brown 227f73e5cebSJed Brown Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them 228f73e5cebSJed Brown 229f73e5cebSJed Brown Level: advanced 230f73e5cebSJed Brown 231f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather() 232f73e5cebSJed Brown @*/ 233f73e5cebSJed Brown PetscErrorCode DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 234f73e5cebSJed Brown { 235f73e5cebSJed Brown PetscErrorCode ierr; 236f73e5cebSJed Brown struct DMCompositeLink *link; 237f73e5cebSJed Brown PetscInt i,wnum; 238f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 239f73e5cebSJed Brown 240f73e5cebSJed Brown PetscFunctionBegin; 241f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 242f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 243f73e5cebSJed Brown if (!com->setup) { 244f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 245f73e5cebSJed Brown } 246f73e5cebSJed Brown 247f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 248f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 249f73e5cebSJed Brown PetscScalar *array; 250f73e5cebSJed Brown Vec v; 251f73e5cebSJed Brown ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr); 252f73e5cebSJed Brown ierr = VecGetArray(pvec,&array);CHKERRQ(ierr); 253f73e5cebSJed Brown ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr); 254f73e5cebSJed Brown ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr); 255f73e5cebSJed Brown vecs[wnum++] = v; 256f73e5cebSJed Brown } 257f73e5cebSJed Brown } 258f73e5cebSJed Brown PetscFunctionReturn(0); 259f73e5cebSJed Brown } 260f73e5cebSJed Brown 261f73e5cebSJed Brown #undef __FUNCT__ 26247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 26347c6ae99SBarry Smith /*@C 264aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 26547c6ae99SBarry Smith representation. 26647c6ae99SBarry Smith 26747c6ae99SBarry Smith Collective on DMComposite 26847c6ae99SBarry Smith 2699ae5db72SJed Brown Input Parameters: 27047c6ae99SBarry Smith + dm - the packer object 27147c6ae99SBarry Smith . gvec - the global vector 2720298fd71SBarry Smith - Vec* ... - the individual parallel vectors, NULL for those that are not needed 27347c6ae99SBarry Smith 27447c6ae99SBarry Smith Level: advanced 27547c6ae99SBarry Smith 2769ae5db72SJed Brown .seealso DMCompositeAddDM(), DMCreateGlobalVector(), 2776eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 278aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 27947c6ae99SBarry Smith 28047c6ae99SBarry Smith @*/ 2817087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 28247c6ae99SBarry Smith { 28347c6ae99SBarry Smith va_list Argp; 28447c6ae99SBarry Smith PetscErrorCode ierr; 28547c6ae99SBarry Smith struct DMCompositeLink *next; 28647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 28747c6ae99SBarry Smith 28847c6ae99SBarry Smith PetscFunctionBegin; 28947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 29047c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 29147c6ae99SBarry Smith next = com->next; 29247c6ae99SBarry Smith if (!com->setup) { 293d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 29447c6ae99SBarry Smith } 29547c6ae99SBarry Smith 29647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 29747c6ae99SBarry Smith va_start(Argp,gvec); 29847c6ae99SBarry Smith while (next) { 29947c6ae99SBarry Smith Vec *vec; 30047c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 3019ae5db72SJed Brown if (vec) { 3029ae5db72SJed Brown ierr = VecResetArray(*vec);CHKERRQ(ierr); 3039ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr); 30447c6ae99SBarry Smith } 30547c6ae99SBarry Smith next = next->next; 30647c6ae99SBarry Smith } 30747c6ae99SBarry Smith va_end(Argp); 30847c6ae99SBarry Smith PetscFunctionReturn(0); 30947c6ae99SBarry Smith } 31047c6ae99SBarry Smith 31147c6ae99SBarry Smith #undef __FUNCT__ 312f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray" 313f73e5cebSJed Brown /*@C 314f73e5cebSJed Brown DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray() 315f73e5cebSJed Brown 316f73e5cebSJed Brown Collective on DMComposite 317f73e5cebSJed Brown 318f73e5cebSJed Brown Input Parameters: 319f73e5cebSJed Brown + dm - the packer object 320f73e5cebSJed Brown . pvec - packed vector 321f73e5cebSJed Brown . nwanted - number of vectors wanted 3220298fd71SBarry Smith . wanted - sorted array of vectors wanted, or NULL to get all vectors 323f73e5cebSJed Brown - vecs - array of global vectors to return 324f73e5cebSJed Brown 325f73e5cebSJed Brown Level: advanced 326f73e5cebSJed Brown 327f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather() 328f73e5cebSJed Brown @*/ 329f73e5cebSJed Brown PetscErrorCode DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 330f73e5cebSJed Brown { 331f73e5cebSJed Brown PetscErrorCode ierr; 332f73e5cebSJed Brown struct DMCompositeLink *link; 333f73e5cebSJed Brown PetscInt i,wnum; 334f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 335f73e5cebSJed Brown 336f73e5cebSJed Brown PetscFunctionBegin; 337f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 338f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 339f73e5cebSJed Brown if (!com->setup) { 340f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 341f73e5cebSJed Brown } 342f73e5cebSJed Brown 343f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 344f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 345f73e5cebSJed Brown ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr); 346f73e5cebSJed Brown ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr); 347f73e5cebSJed Brown wnum++; 348f73e5cebSJed Brown } 349f73e5cebSJed Brown } 350f73e5cebSJed Brown PetscFunctionReturn(0); 351f73e5cebSJed Brown } 352f73e5cebSJed Brown 353f73e5cebSJed Brown #undef __FUNCT__ 35447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 35547c6ae99SBarry Smith /*@C 35647c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 35747c6ae99SBarry Smith 35847c6ae99SBarry Smith Collective on DMComposite 35947c6ae99SBarry Smith 3609ae5db72SJed Brown Input Parameters: 36147c6ae99SBarry Smith + dm - the packer object 36247c6ae99SBarry Smith . gvec - the global vector 3630298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for those that are not needed 36447c6ae99SBarry Smith 36547c6ae99SBarry Smith Level: advanced 36647c6ae99SBarry Smith 3676f3c3dcfSJed Brown Notes: 3686f3c3dcfSJed Brown DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is 3696f3c3dcfSJed Brown accessible from Fortran. 3706f3c3dcfSJed Brown 3719ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 3726eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 37347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 3746f3c3dcfSJed Brown DMCompositeScatterArray() 37547c6ae99SBarry Smith 37647c6ae99SBarry Smith @*/ 3777087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 37847c6ae99SBarry Smith { 37947c6ae99SBarry Smith va_list Argp; 38047c6ae99SBarry Smith PetscErrorCode ierr; 38147c6ae99SBarry Smith struct DMCompositeLink *next; 3828fd8f222SJed Brown PetscInt cnt; 38347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38447c6ae99SBarry Smith 38547c6ae99SBarry Smith PetscFunctionBegin; 38647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 38847c6ae99SBarry Smith if (!com->setup) { 389d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 39047c6ae99SBarry Smith } 39147c6ae99SBarry Smith 39247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 39347c6ae99SBarry Smith va_start(Argp,gvec); 3948fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 3959ae5db72SJed Brown Vec local; 3969ae5db72SJed Brown local = va_arg(Argp, Vec); 3979ae5db72SJed Brown if (local) { 3989ae5db72SJed Brown Vec global; 39947c6ae99SBarry Smith PetscScalar *array; 4009ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 4019ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4029ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4039ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4049ae5db72SJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4059ae5db72SJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4069ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4079ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4089ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 40947c6ae99SBarry Smith } 41047c6ae99SBarry Smith } 41147c6ae99SBarry Smith va_end(Argp); 41247c6ae99SBarry Smith PetscFunctionReturn(0); 41347c6ae99SBarry Smith } 41447c6ae99SBarry Smith 41547c6ae99SBarry Smith #undef __FUNCT__ 4166f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray" 4176f3c3dcfSJed Brown /*@ 4186f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 4196f3c3dcfSJed Brown 4206f3c3dcfSJed Brown Collective on DMComposite 4216f3c3dcfSJed Brown 4226f3c3dcfSJed Brown Input Parameters: 4236f3c3dcfSJed Brown + dm - the packer object 4246f3c3dcfSJed Brown . gvec - the global vector 4256f3c3dcfSJed Brown . lvecs - array of local vectors, NULL for any that are not needed 4266f3c3dcfSJed Brown 4276f3c3dcfSJed Brown Level: advanced 4286f3c3dcfSJed Brown 4296f3c3dcfSJed Brown Note: 4306f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeScatterArray() 4316f3c3dcfSJed Brown 4326f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector() 4336f3c3dcfSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 4346f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 4356f3c3dcfSJed Brown 4366f3c3dcfSJed Brown @*/ 4376f3c3dcfSJed Brown PetscErrorCode DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs) 4386f3c3dcfSJed Brown { 4396f3c3dcfSJed Brown PetscErrorCode ierr; 4406f3c3dcfSJed Brown struct DMCompositeLink *next; 4416f3c3dcfSJed Brown PetscInt i; 4426f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 4436f3c3dcfSJed Brown 4446f3c3dcfSJed Brown PetscFunctionBegin; 4456f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 4466f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 4476f3c3dcfSJed Brown if (!com->setup) { 4486f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 4496f3c3dcfSJed Brown } 4506f3c3dcfSJed Brown 4516f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 4526f3c3dcfSJed Brown for (i=0,next=com->next; next; next=next->next,i++) { 4536f3c3dcfSJed Brown if (lvecs[i]) { 4546f3c3dcfSJed Brown Vec global; 4556f3c3dcfSJed Brown PetscScalar *array; 4566f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 4576f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4586f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4596f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4606f3c3dcfSJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4616f3c3dcfSJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4626f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4636f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4646f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 4656f3c3dcfSJed Brown } 4666f3c3dcfSJed Brown } 4676f3c3dcfSJed Brown PetscFunctionReturn(0); 4686f3c3dcfSJed Brown } 4696f3c3dcfSJed Brown 4706f3c3dcfSJed Brown #undef __FUNCT__ 47147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 47247c6ae99SBarry Smith /*@C 47347c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 47447c6ae99SBarry Smith 47547c6ae99SBarry Smith Collective on DMComposite 47647c6ae99SBarry Smith 47747c6ae99SBarry Smith Input Parameter: 47847c6ae99SBarry Smith + dm - the packer object 47947c6ae99SBarry Smith . gvec - the global vector 4800298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for any that are not needed 48147c6ae99SBarry Smith 48247c6ae99SBarry Smith Level: advanced 48347c6ae99SBarry Smith 4849ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 4856eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 48647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 48747c6ae99SBarry Smith 48847c6ae99SBarry Smith @*/ 4897087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 49047c6ae99SBarry Smith { 49147c6ae99SBarry Smith va_list Argp; 49247c6ae99SBarry Smith PetscErrorCode ierr; 49347c6ae99SBarry Smith struct DMCompositeLink *next; 49447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4958fd8f222SJed Brown PetscInt cnt; 49647c6ae99SBarry Smith 49747c6ae99SBarry Smith PetscFunctionBegin; 49847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 49947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 50047c6ae99SBarry Smith if (!com->setup) { 501d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 50247c6ae99SBarry Smith } 50347c6ae99SBarry Smith 50447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 505df0c820aSJed Brown va_start(Argp,imode); 5068fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 5079ae5db72SJed Brown Vec local; 5089ae5db72SJed Brown local = va_arg(Argp, Vec); 5099ae5db72SJed Brown if (local) { 51047c6ae99SBarry Smith PetscScalar *array; 5119ae5db72SJed Brown Vec global; 5129ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 5139ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5149ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5159ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5169ae5db72SJed Brown ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr); 5179ae5db72SJed Brown ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr); 5189ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5199ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5209ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 52147c6ae99SBarry Smith } 52247c6ae99SBarry Smith } 52347c6ae99SBarry Smith va_end(Argp); 52447c6ae99SBarry Smith PetscFunctionReturn(0); 52547c6ae99SBarry Smith } 52647c6ae99SBarry Smith 52747c6ae99SBarry Smith #undef __FUNCT__ 5286f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray" 5296f3c3dcfSJed Brown /*@ 5306f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 5316f3c3dcfSJed Brown 5326f3c3dcfSJed Brown Collective on DMComposite 5336f3c3dcfSJed Brown 5346f3c3dcfSJed Brown Input Parameter: 5356f3c3dcfSJed Brown + dm - the packer object 5366f3c3dcfSJed Brown . gvec - the global vector 5376f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 5386f3c3dcfSJed Brown 5396f3c3dcfSJed Brown Level: advanced 5406f3c3dcfSJed Brown 5416f3c3dcfSJed Brown Notes: 5426f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeGather(). 5436f3c3dcfSJed Brown 5446f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 5456f3c3dcfSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 5466f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(), 5476f3c3dcfSJed Brown @*/ 5486f3c3dcfSJed Brown PetscErrorCode DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs) 5496f3c3dcfSJed Brown { 5506f3c3dcfSJed Brown PetscErrorCode ierr; 5516f3c3dcfSJed Brown struct DMCompositeLink *next; 5526f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 5536f3c3dcfSJed Brown PetscInt i; 5546f3c3dcfSJed Brown 5556f3c3dcfSJed Brown PetscFunctionBegin; 5566f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 5576f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 5586f3c3dcfSJed Brown if (!com->setup) { 5596f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 5606f3c3dcfSJed Brown } 5616f3c3dcfSJed Brown 5626f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 5636f3c3dcfSJed Brown for (next=com->next,i=0; next; next=next->next,i++) { 5646f3c3dcfSJed Brown if (lvecs[i]) { 5656f3c3dcfSJed Brown PetscScalar *array; 5666f3c3dcfSJed Brown Vec global; 5676f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 5686f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5696f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5706f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5716f3c3dcfSJed Brown ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5726f3c3dcfSJed Brown ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5736f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5746f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5756f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 5766f3c3dcfSJed Brown } 5776f3c3dcfSJed Brown } 5786f3c3dcfSJed Brown PetscFunctionReturn(0); 5796f3c3dcfSJed Brown } 5806f3c3dcfSJed Brown 5816f3c3dcfSJed Brown #undef __FUNCT__ 58247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 58347c6ae99SBarry Smith /*@C 584aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 58547c6ae99SBarry Smith 58647c6ae99SBarry Smith Collective on DMComposite 58747c6ae99SBarry Smith 58847c6ae99SBarry Smith Input Parameter: 58947c6ae99SBarry Smith + dm - the packer object 59047c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 59147c6ae99SBarry Smith 59247c6ae99SBarry Smith Level: advanced 59347c6ae99SBarry Smith 5940c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 5956eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 59647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 59747c6ae99SBarry Smith 59847c6ae99SBarry Smith @*/ 5997087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 60047c6ae99SBarry Smith { 60147c6ae99SBarry Smith PetscErrorCode ierr; 60206ebdd98SJed Brown PetscInt n,nlocal; 60347c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 60406ebdd98SJed Brown Vec global,local; 60547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 60647c6ae99SBarry Smith 60747c6ae99SBarry Smith PetscFunctionBegin; 60847c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 60947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 61047c6ae99SBarry Smith next = com->next; 611ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 61247c6ae99SBarry Smith 61347c6ae99SBarry Smith /* create new link */ 614b00a9115SJed Brown ierr = PetscNew(&mine);CHKERRQ(ierr); 61547c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 61647c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 61747c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 61847c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 61906ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 62006ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 62106ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 6228865f1eaSKarl Rupp 62347c6ae99SBarry Smith mine->n = n; 62406ebdd98SJed Brown mine->nlocal = nlocal; 62547c6ae99SBarry Smith mine->dm = dm; 6260298fd71SBarry Smith mine->next = NULL; 62747c6ae99SBarry Smith com->n += n; 62847c6ae99SBarry Smith 62947c6ae99SBarry Smith /* add to end of list */ 6308865f1eaSKarl Rupp if (!next) com->next = mine; 6318865f1eaSKarl Rupp else { 63247c6ae99SBarry Smith while (next->next) next = next->next; 63347c6ae99SBarry Smith next->next = mine; 63447c6ae99SBarry Smith } 63547c6ae99SBarry Smith com->nDM++; 63647c6ae99SBarry Smith com->nmine++; 63747c6ae99SBarry Smith PetscFunctionReturn(0); 63847c6ae99SBarry Smith } 63947c6ae99SBarry Smith 6409804daf3SBarry Smith #include <petscdraw.h> 64126887b52SJed Brown PETSC_EXTERN PetscErrorCode VecView_MPI(Vec,PetscViewer); 64247c6ae99SBarry Smith #undef __FUNCT__ 64347c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 6447087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 64547c6ae99SBarry Smith { 64647c6ae99SBarry Smith DM dm; 64747c6ae99SBarry Smith PetscErrorCode ierr; 64847c6ae99SBarry Smith struct DMCompositeLink *next; 64947c6ae99SBarry Smith PetscBool isdraw; 650cef07954SSatish Balay DM_Composite *com; 65147c6ae99SBarry Smith 65247c6ae99SBarry Smith PetscFunctionBegin; 653c688c046SMatthew G Knepley ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr); 654ce94432eSBarry Smith if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 65547c6ae99SBarry Smith com = (DM_Composite*)dm->data; 65647c6ae99SBarry Smith next = com->next; 65747c6ae99SBarry Smith 658251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 65947c6ae99SBarry Smith if (!isdraw) { 66047c6ae99SBarry Smith /* do I really want to call this? */ 66147c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 66247c6ae99SBarry Smith } else { 66347c6ae99SBarry Smith PetscInt cnt = 0; 66447c6ae99SBarry Smith 66547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 66647c6ae99SBarry Smith while (next) { 66747c6ae99SBarry Smith Vec vec; 6689ae5db72SJed Brown PetscScalar *array; 66947c6ae99SBarry Smith PetscInt bs; 67047c6ae99SBarry Smith 6719ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 6729ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr); 6739ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 6749ae5db72SJed Brown ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr); 6759ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 67647c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 67747c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 6789ae5db72SJed Brown ierr = VecResetArray(vec);CHKERRQ(ierr); 6799ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr); 68047c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 68147c6ae99SBarry Smith cnt += bs; 68247c6ae99SBarry Smith next = next->next; 68347c6ae99SBarry Smith } 68447c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 68547c6ae99SBarry Smith } 68647c6ae99SBarry Smith PetscFunctionReturn(0); 68747c6ae99SBarry Smith } 68847c6ae99SBarry Smith 68947c6ae99SBarry Smith #undef __FUNCT__ 6900c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 6917087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 69247c6ae99SBarry Smith { 69347c6ae99SBarry Smith PetscErrorCode ierr; 69447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 69547c6ae99SBarry Smith 69647c6ae99SBarry Smith PetscFunctionBegin; 69747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 698d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 699ce94432eSBarry Smith ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr); 700c688c046SMatthew G Knepley ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr); 70147c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr); 70247c6ae99SBarry Smith PetscFunctionReturn(0); 70347c6ae99SBarry Smith } 70447c6ae99SBarry Smith 70547c6ae99SBarry Smith #undef __FUNCT__ 7060c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 7077087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 70847c6ae99SBarry Smith { 70947c6ae99SBarry Smith PetscErrorCode ierr; 71047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 71147c6ae99SBarry Smith 71247c6ae99SBarry Smith PetscFunctionBegin; 71347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 71447c6ae99SBarry Smith if (!com->setup) { 715d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 71647c6ae99SBarry Smith } 717ce94432eSBarry Smith ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr); 718c688c046SMatthew G Knepley ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr); 71947c6ae99SBarry Smith PetscFunctionReturn(0); 72047c6ae99SBarry Smith } 72147c6ae99SBarry Smith 72247c6ae99SBarry Smith #undef __FUNCT__ 7236eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 72447c6ae99SBarry Smith /*@C 7259ae5db72SJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space 72647c6ae99SBarry Smith 72706ebdd98SJed Brown Collective on DM 72847c6ae99SBarry Smith 72947c6ae99SBarry Smith Input Parameter: 73047c6ae99SBarry Smith . dm - the packer object 73147c6ae99SBarry Smith 73247c6ae99SBarry Smith Output Parameters: 7339ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 7349ae5db72SJed Brown all the ghost points that individual ghosted DMDA's may have. 73547c6ae99SBarry Smith 73647c6ae99SBarry Smith Level: advanced 73747c6ae99SBarry Smith 73847c6ae99SBarry Smith Notes: 7396eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 74047c6ae99SBarry Smith 7419ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 74247c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 74347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 74447c6ae99SBarry Smith 74547c6ae99SBarry Smith @*/ 7467087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 74747c6ae99SBarry Smith { 74847c6ae99SBarry Smith PetscErrorCode ierr; 74947c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 75047c6ae99SBarry Smith struct DMCompositeLink *next; 75147c6ae99SBarry Smith PetscMPIInt rank; 75247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 75347c6ae99SBarry Smith 75447c6ae99SBarry Smith PetscFunctionBegin; 75547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 756728e99d6SJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 757785e854fSJed Brown ierr = PetscMalloc1((com->nDM),ltogs);CHKERRQ(ierr); 75847c6ae99SBarry Smith next = com->next; 759ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 76047c6ae99SBarry Smith 76147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76247c6ae99SBarry Smith cnt = 0; 76347c6ae99SBarry Smith while (next) { 7646eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 7656eb61c8cSJed Brown PetscMPIInt size; 76686994e45SJed Brown const PetscInt *suboff,*indices; 7676eb61c8cSJed Brown Vec global; 76847c6ae99SBarry Smith 7696eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 7701411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 7716eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 77286994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 773785e854fSJed Brown ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr); 77447c6ae99SBarry Smith 7756eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 7766eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 7776eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 778ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr); 7796eb61c8cSJed Brown 7806eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 7816eb61c8cSJed Brown for (i=0; i<n; i++) { 78286994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 7836eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 7846eb61c8cSJed Brown while (hi-lo > 1) { 7856eb61c8cSJed Brown t = lo + (hi-lo)/2; 7866eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 7876eb61c8cSJed Brown else lo = t; 7886eb61c8cSJed Brown } 7896eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 7906eb61c8cSJed Brown } 79186994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 792f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),1,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 7936eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 79447c6ae99SBarry Smith next = next->next; 79547c6ae99SBarry Smith cnt++; 79647c6ae99SBarry Smith } 79747c6ae99SBarry Smith PetscFunctionReturn(0); 79847c6ae99SBarry Smith } 79947c6ae99SBarry Smith 80047c6ae99SBarry Smith #undef __FUNCT__ 80187c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 80287c85e80SJed Brown /*@C 8039ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 80487c85e80SJed Brown 80587c85e80SJed Brown Not Collective 80687c85e80SJed Brown 80787c85e80SJed Brown Input Arguments: 80887c85e80SJed Brown . dm - composite DM 80987c85e80SJed Brown 81087c85e80SJed Brown Output Arguments: 81187c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 81287c85e80SJed Brown 81387c85e80SJed Brown Level: intermediate 81487c85e80SJed Brown 81587c85e80SJed Brown Notes: 81687c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 81787c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 8189ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 81987c85e80SJed Brown 82087c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 82187c85e80SJed Brown 82287c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 82387c85e80SJed Brown 82487c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 82587c85e80SJed Brown 82687c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 82787c85e80SJed Brown @*/ 8287087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 82987c85e80SJed Brown { 83087c85e80SJed Brown PetscErrorCode ierr; 83187c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 83287c85e80SJed Brown struct DMCompositeLink *link; 83387c85e80SJed Brown PetscInt cnt,start; 83487c85e80SJed Brown 83587c85e80SJed Brown PetscFunctionBegin; 83687c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 83787c85e80SJed Brown PetscValidPointer(is,2); 838785e854fSJed Brown ierr = PetscMalloc1(com->nmine,is);CHKERRQ(ierr); 83906ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 840520db06cSJed Brown PetscInt bs; 8419ae5db72SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 8421411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 843520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 844520db06cSJed Brown } 84587c85e80SJed Brown PetscFunctionReturn(0); 84687c85e80SJed Brown } 84787c85e80SJed Brown 84887c85e80SJed Brown #undef __FUNCT__ 84947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 85047c6ae99SBarry Smith /*@C 85147c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 85247c6ae99SBarry Smith 85347c6ae99SBarry Smith Collective on DMComposite 85447c6ae99SBarry Smith 85547c6ae99SBarry Smith Input Parameter: 85647c6ae99SBarry Smith . dm - the packer object 85747c6ae99SBarry Smith 85847c6ae99SBarry Smith Output Parameters: 85947c6ae99SBarry Smith . is - the array of index sets 86047c6ae99SBarry Smith 86147c6ae99SBarry Smith Level: advanced 86247c6ae99SBarry Smith 86347c6ae99SBarry Smith Notes: 86447c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 86547c6ae99SBarry Smith 86647c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 86747c6ae99SBarry Smith 8686eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 8696eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 8706eb61c8cSJed Brown indices. 87147c6ae99SBarry Smith 8729ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 87347c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 87447c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 87547c6ae99SBarry Smith 87647c6ae99SBarry Smith @*/ 8776eb61c8cSJed Brown 8787087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 87947c6ae99SBarry Smith { 88047c6ae99SBarry Smith PetscErrorCode ierr; 88166bb578eSMark Adams PetscInt cnt = 0; 88247c6ae99SBarry Smith struct DMCompositeLink *next; 88347c6ae99SBarry Smith PetscMPIInt rank; 88447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 88547c6ae99SBarry Smith 88647c6ae99SBarry Smith PetscFunctionBegin; 88747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 888785e854fSJed Brown ierr = PetscMalloc1((com->nDM),is);CHKERRQ(ierr); 88947c6ae99SBarry Smith next = com->next; 890ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 89147c6ae99SBarry Smith 89247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 89347c6ae99SBarry Smith while (next) { 89466bb578eSMark Adams ierr = ISCreateStride(PetscObjectComm((PetscObject)dm),next->n,next->grstart,1,&(*is)[cnt]);CHKERRQ(ierr); 8950f21e855SMatthew G. Knepley if (dm->prob) { 89665c226d8SMatthew G. Knepley MatNullSpace space; 89765c226d8SMatthew G. Knepley Mat pmat; 8980f21e855SMatthew G. Knepley PetscObject disc; 8990f21e855SMatthew G. Knepley PetscInt Nf; 90065c226d8SMatthew G. Knepley 9010f21e855SMatthew G. Knepley ierr = PetscProblemGetNumFields(dm->prob, &Nf);CHKERRQ(ierr); 902*f24dd8d2SMatthew G. Knepley if (cnt < Nf) { 9030f21e855SMatthew G. Knepley ierr = PetscProblemGetDiscretization(dm->prob, cnt, &disc);CHKERRQ(ierr); 9040f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "nullspace", (PetscObject*) &space);CHKERRQ(ierr); 905aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nullspace", (PetscObject) space);CHKERRQ(ierr);} 9060f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "nearnullspace", (PetscObject*) &space);CHKERRQ(ierr); 907aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nearnullspace", (PetscObject) space);CHKERRQ(ierr);} 9080f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "pmat", (PetscObject*) &pmat);CHKERRQ(ierr); 909aac2dd2dSMatthew G. Knepley if (pmat) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "pmat", (PetscObject) pmat);CHKERRQ(ierr);} 91065c226d8SMatthew G. Knepley } 911*f24dd8d2SMatthew G. Knepley } 91247c6ae99SBarry Smith cnt++; 91347c6ae99SBarry Smith next = next->next; 91447c6ae99SBarry Smith } 91547c6ae99SBarry Smith PetscFunctionReturn(0); 91647c6ae99SBarry Smith } 91747c6ae99SBarry Smith 9184d343eeaSMatthew G Knepley #undef __FUNCT__ 9194d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite" 92021c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields) 9214d343eeaSMatthew G Knepley { 9224d343eeaSMatthew G Knepley PetscInt nDM; 9234d343eeaSMatthew G Knepley DM *dms; 9244d343eeaSMatthew G Knepley PetscInt i; 9254d343eeaSMatthew G Knepley PetscErrorCode ierr; 9264d343eeaSMatthew G Knepley 9274d343eeaSMatthew G Knepley PetscFunctionBegin; 9284d343eeaSMatthew G Knepley ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 9298865f1eaSKarl Rupp if (numFields) *numFields = nDM; 9304d343eeaSMatthew G Knepley ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr); 9314d343eeaSMatthew G Knepley if (fieldNames) { 932785e854fSJed Brown ierr = PetscMalloc1(nDM, &dms);CHKERRQ(ierr); 933785e854fSJed Brown ierr = PetscMalloc1(nDM, fieldNames);CHKERRQ(ierr); 9344d343eeaSMatthew G Knepley ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr); 9354d343eeaSMatthew G Knepley for (i=0; i<nDM; i++) { 9364d343eeaSMatthew G Knepley char buf[256]; 9374d343eeaSMatthew G Knepley const char *splitname; 9384d343eeaSMatthew G Knepley 9394d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 9404d343eeaSMatthew G Knepley splitname = ((PetscObject) dm)->name; 9414d343eeaSMatthew G Knepley if (!splitname) { 9424d343eeaSMatthew G Knepley ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr); 9434d343eeaSMatthew G Knepley if (splitname) { 9444d343eeaSMatthew G Knepley size_t len; 9458caf3d72SBarry Smith ierr = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr); 9468caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 9474d343eeaSMatthew G Knepley ierr = PetscStrlen(buf,&len);CHKERRQ(ierr); 9484d343eeaSMatthew G Knepley if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */ 9494d343eeaSMatthew G Knepley splitname = buf; 9504d343eeaSMatthew G Knepley } 9514d343eeaSMatthew G Knepley } 9524d343eeaSMatthew G Knepley if (!splitname) { 9538caf3d72SBarry Smith ierr = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr); 9544d343eeaSMatthew G Knepley splitname = buf; 9554d343eeaSMatthew G Knepley } 95621c9b008SJed Brown ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr); 9574d343eeaSMatthew G Knepley } 9584d343eeaSMatthew G Knepley ierr = PetscFree(dms);CHKERRQ(ierr); 9594d343eeaSMatthew G Knepley } 9604d343eeaSMatthew G Knepley PetscFunctionReturn(0); 9614d343eeaSMatthew G Knepley } 9624d343eeaSMatthew G Knepley 963e7c4fc90SDmitry Karpeev /* 964e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 9650298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 966e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 967e7c4fc90SDmitry Karpeev */ 968e7c4fc90SDmitry Karpeev #undef __FUNCT__ 96916621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite" 97016621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist) 971e7c4fc90SDmitry Karpeev { 972e7c4fc90SDmitry Karpeev PetscInt nDM; 973e7c4fc90SDmitry Karpeev PetscInt i; 974e7c4fc90SDmitry Karpeev PetscErrorCode ierr; 975e7c4fc90SDmitry Karpeev 976e7c4fc90SDmitry Karpeev PetscFunctionBegin; 977e7c4fc90SDmitry Karpeev ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr); 978e7c4fc90SDmitry Karpeev if (dmlist) { 979e7c4fc90SDmitry Karpeev ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 980785e854fSJed Brown ierr = PetscMalloc1(nDM, dmlist);CHKERRQ(ierr); 981e7c4fc90SDmitry Karpeev ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr); 982e7c4fc90SDmitry Karpeev for (i=0; i<nDM; i++) { 983e7c4fc90SDmitry Karpeev ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr); 984e7c4fc90SDmitry Karpeev } 985e7c4fc90SDmitry Karpeev } 986e7c4fc90SDmitry Karpeev PetscFunctionReturn(0); 987e7c4fc90SDmitry Karpeev } 988e7c4fc90SDmitry Karpeev 989e7c4fc90SDmitry Karpeev 990e7c4fc90SDmitry Karpeev 99147c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 99247c6ae99SBarry Smith #undef __FUNCT__ 99347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 99447c6ae99SBarry Smith /*@C 9959ae5db72SJed Brown DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite. 99647c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 99747c6ae99SBarry Smith 99847c6ae99SBarry Smith Not Collective 99947c6ae99SBarry Smith 100047c6ae99SBarry Smith Input Parameter: 100147c6ae99SBarry Smith . dm - the packer object 100247c6ae99SBarry Smith 100347c6ae99SBarry Smith Output Parameter: 10049ae5db72SJed Brown . Vec ... - the individual sequential Vecs 100547c6ae99SBarry Smith 100647c6ae99SBarry Smith Level: advanced 100747c6ae99SBarry Smith 10089ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10096eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 101047c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 101147c6ae99SBarry Smith 101247c6ae99SBarry Smith @*/ 10137087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 101447c6ae99SBarry Smith { 101547c6ae99SBarry Smith va_list Argp; 101647c6ae99SBarry Smith PetscErrorCode ierr; 101747c6ae99SBarry Smith struct DMCompositeLink *next; 101847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 101947c6ae99SBarry Smith 102047c6ae99SBarry Smith PetscFunctionBegin; 102147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 102247c6ae99SBarry Smith next = com->next; 102347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 102447c6ae99SBarry Smith va_start(Argp,dm); 102547c6ae99SBarry Smith while (next) { 102647c6ae99SBarry Smith Vec *vec; 102747c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 102806930112SJed Brown if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);} 102947c6ae99SBarry Smith next = next->next; 103047c6ae99SBarry Smith } 103147c6ae99SBarry Smith va_end(Argp); 103247c6ae99SBarry Smith PetscFunctionReturn(0); 103347c6ae99SBarry Smith } 103447c6ae99SBarry Smith 103547c6ae99SBarry Smith #undef __FUNCT__ 103647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 103747c6ae99SBarry Smith /*@C 10389ae5db72SJed Brown DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite. 103947c6ae99SBarry Smith 104047c6ae99SBarry Smith Not Collective 104147c6ae99SBarry Smith 104247c6ae99SBarry Smith Input Parameter: 104347c6ae99SBarry Smith . dm - the packer object 104447c6ae99SBarry Smith 104547c6ae99SBarry Smith Output Parameter: 10469ae5db72SJed Brown . Vec ... - the individual sequential Vecs 104747c6ae99SBarry Smith 104847c6ae99SBarry Smith Level: advanced 104947c6ae99SBarry Smith 10509ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10516eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 105247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 105347c6ae99SBarry Smith 105447c6ae99SBarry Smith @*/ 10557087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 105647c6ae99SBarry Smith { 105747c6ae99SBarry Smith va_list Argp; 105847c6ae99SBarry Smith PetscErrorCode ierr; 105947c6ae99SBarry Smith struct DMCompositeLink *next; 106047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 106147c6ae99SBarry Smith 106247c6ae99SBarry Smith PetscFunctionBegin; 106347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 106447c6ae99SBarry Smith next = com->next; 106547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 106647c6ae99SBarry Smith va_start(Argp,dm); 106747c6ae99SBarry Smith while (next) { 106847c6ae99SBarry Smith Vec *vec; 106947c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 107006930112SJed Brown if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);} 107147c6ae99SBarry Smith next = next->next; 107247c6ae99SBarry Smith } 107347c6ae99SBarry Smith va_end(Argp); 107447c6ae99SBarry Smith PetscFunctionReturn(0); 107547c6ae99SBarry Smith } 107647c6ae99SBarry Smith 107747c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 107847c6ae99SBarry Smith #undef __FUNCT__ 107947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 108047c6ae99SBarry Smith /*@C 10819ae5db72SJed Brown DMCompositeGetEntries - Gets the DM for each entry in a DMComposite. 108247c6ae99SBarry Smith 108347c6ae99SBarry Smith Not Collective 108447c6ae99SBarry Smith 108547c6ae99SBarry Smith Input Parameter: 108647c6ae99SBarry Smith . dm - the packer object 108747c6ae99SBarry Smith 108847c6ae99SBarry Smith Output Parameter: 10899ae5db72SJed Brown . DM ... - the individual entries (DMs) 109047c6ae99SBarry Smith 109147c6ae99SBarry Smith Level: advanced 109247c6ae99SBarry Smith 10932fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray() 10946eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 109547c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 109647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 109747c6ae99SBarry Smith 109847c6ae99SBarry Smith @*/ 10997087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 110047c6ae99SBarry Smith { 110147c6ae99SBarry Smith va_list Argp; 110247c6ae99SBarry Smith struct DMCompositeLink *next; 110347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 110447c6ae99SBarry Smith 110547c6ae99SBarry Smith PetscFunctionBegin; 110647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 110747c6ae99SBarry Smith next = com->next; 110847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 110947c6ae99SBarry Smith va_start(Argp,dm); 111047c6ae99SBarry Smith while (next) { 111147c6ae99SBarry Smith DM *dmn; 111247c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 11139ae5db72SJed Brown if (dmn) *dmn = next->dm; 111447c6ae99SBarry Smith next = next->next; 111547c6ae99SBarry Smith } 111647c6ae99SBarry Smith va_end(Argp); 111747c6ae99SBarry Smith PetscFunctionReturn(0); 111847c6ae99SBarry Smith } 111947c6ae99SBarry Smith 112047c6ae99SBarry Smith #undef __FUNCT__ 11212fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray" 1122dbab29e1SMark F. Adams /*@C 11232fa5ba8aSJed Brown DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite. 11242fa5ba8aSJed Brown 11252fa5ba8aSJed Brown Not Collective 11262fa5ba8aSJed Brown 11272fa5ba8aSJed Brown Input Parameter: 11282fa5ba8aSJed Brown + dm - the packer object 11292fa5ba8aSJed Brown - dms - array of sufficient length (see DMCompositeGetNumberDM()), holds the DMs on output 11302fa5ba8aSJed Brown 11312fa5ba8aSJed Brown Level: advanced 11322fa5ba8aSJed Brown 11332fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries() 11342fa5ba8aSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 11352fa5ba8aSJed Brown DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 11362fa5ba8aSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 11372fa5ba8aSJed Brown 11382fa5ba8aSJed Brown @*/ 11392fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[]) 11402fa5ba8aSJed Brown { 11412fa5ba8aSJed Brown struct DMCompositeLink *next; 11422fa5ba8aSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 11432fa5ba8aSJed Brown PetscInt i; 11442fa5ba8aSJed Brown 11452fa5ba8aSJed Brown PetscFunctionBegin; 11462fa5ba8aSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 11472fa5ba8aSJed Brown /* loop over packed objects, handling one at at time */ 11482fa5ba8aSJed Brown for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm; 11492fa5ba8aSJed Brown PetscFunctionReturn(0); 11502fa5ba8aSJed Brown } 11512fa5ba8aSJed Brown 11522fa5ba8aSJed Brown #undef __FUNCT__ 11530c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 11547087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 115547c6ae99SBarry Smith { 115647c6ae99SBarry Smith PetscErrorCode ierr; 115747c6ae99SBarry Smith struct DMCompositeLink *next; 115847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 115947c6ae99SBarry Smith DM dm; 116047c6ae99SBarry Smith 116147c6ae99SBarry Smith PetscFunctionBegin; 116247c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 1163ce94432eSBarry Smith if (comm == MPI_COMM_NULL) { 1164ce94432eSBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 1165ce94432eSBarry Smith } 11662ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 116747c6ae99SBarry Smith next = com->next; 116847c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 116947c6ae99SBarry Smith 117047c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 117147c6ae99SBarry Smith while (next) { 117247c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 117347c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 117447c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 117547c6ae99SBarry Smith next = next->next; 117647c6ae99SBarry Smith } 117747c6ae99SBarry Smith PetscFunctionReturn(0); 117847c6ae99SBarry Smith } 117947c6ae99SBarry Smith 118014354c39SJed Brown #undef __FUNCT__ 118114354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite" 118214354c39SJed Brown PetscErrorCode DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine) 118314354c39SJed Brown { 118414354c39SJed Brown PetscErrorCode ierr; 118514354c39SJed Brown struct DMCompositeLink *next; 118614354c39SJed Brown DM_Composite *com = (DM_Composite*)dmi->data; 118714354c39SJed Brown DM dm; 118814354c39SJed Brown 118914354c39SJed Brown PetscFunctionBegin; 119014354c39SJed Brown PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 11912ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 11922ee06e3bSJed Brown if (comm == MPI_COMM_NULL) { 119325296bd5SBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 119425296bd5SBarry Smith } 119514354c39SJed Brown next = com->next; 119614354c39SJed Brown ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 119714354c39SJed Brown 119814354c39SJed Brown /* loop over packed objects, handling one at at time */ 119914354c39SJed Brown while (next) { 120014354c39SJed Brown ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr); 120114354c39SJed Brown ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 120214354c39SJed Brown ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 120314354c39SJed Brown next = next->next; 120414354c39SJed Brown } 120514354c39SJed Brown PetscFunctionReturn(0); 120614354c39SJed Brown } 120747c6ae99SBarry Smith 120847c6ae99SBarry Smith #undef __FUNCT__ 1209e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite" 1210e727c939SJed Brown PetscErrorCode DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 121147c6ae99SBarry Smith { 121247c6ae99SBarry Smith PetscErrorCode ierr; 12139ae5db72SJed Brown PetscInt m,n,M,N,nDM,i; 121447c6ae99SBarry Smith struct DMCompositeLink *nextc; 121547c6ae99SBarry Smith struct DMCompositeLink *nextf; 121625296bd5SBarry Smith Vec gcoarse,gfine,*vecs; 121747c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 121847c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 12199ae5db72SJed Brown Mat *mats; 122047c6ae99SBarry Smith 122147c6ae99SBarry Smith PetscFunctionBegin; 122247c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 122347c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 1224f692024eSJed Brown ierr = DMSetUp(coarse);CHKERRQ(ierr); 1225f692024eSJed Brown ierr = DMSetUp(fine);CHKERRQ(ierr); 122647c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 12279ae5db72SJed Brown ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12289ae5db72SJed Brown ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr); 122947c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 123047c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 123147c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 123247c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 12339ae5db72SJed Brown ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12349ae5db72SJed Brown ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr); 123547c6ae99SBarry Smith 12369ae5db72SJed Brown nDM = comfine->nDM; 1237ce94432eSBarry Smith if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM); 12381795a4d1SJed Brown ierr = PetscCalloc1(nDM*nDM,&mats);CHKERRQ(ierr); 123925296bd5SBarry Smith if (v) { 12401795a4d1SJed Brown ierr = PetscCalloc1(nDM,&vecs);CHKERRQ(ierr); 124125296bd5SBarry Smith } 124247c6ae99SBarry Smith 124347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 12449ae5db72SJed Brown for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) { 124525296bd5SBarry Smith if (!v) { 12460298fd71SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr); 124725296bd5SBarry Smith } else { 124825296bd5SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr); 124925296bd5SBarry Smith } 125047c6ae99SBarry Smith } 1251ce94432eSBarry Smith ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr); 125225296bd5SBarry Smith if (v) { 1253ce94432eSBarry Smith ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr); 125425296bd5SBarry Smith } 12559ae5db72SJed Brown for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);} 12569ae5db72SJed Brown ierr = PetscFree(mats);CHKERRQ(ierr); 125725296bd5SBarry Smith if (v) { 125825296bd5SBarry Smith for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);} 125925296bd5SBarry Smith ierr = PetscFree(vecs);CHKERRQ(ierr); 126025296bd5SBarry Smith } 126147c6ae99SBarry Smith PetscFunctionReturn(0); 126247c6ae99SBarry Smith } 126347c6ae99SBarry Smith 126447c6ae99SBarry Smith #undef __FUNCT__ 1265184d77edSJed Brown #define __FUNCT__ "DMGetLocalToGlobalMapping_Composite" 1266184d77edSJed Brown static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 12671411c6eeSJed Brown { 12681411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 12691411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1270f7efa3c7SJed Brown PetscInt i; 12711411c6eeSJed Brown PetscErrorCode ierr; 12721411c6eeSJed Brown 12731411c6eeSJed Brown PetscFunctionBegin; 12741411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 12751411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 1276ce94432eSBarry Smith ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr); 12779ae5db72SJed Brown for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(<ogs[i]);CHKERRQ(ierr);} 12781411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 12791411c6eeSJed Brown PetscFunctionReturn(0); 12801411c6eeSJed Brown } 12811411c6eeSJed Brown 12821411c6eeSJed Brown 12831411c6eeSJed Brown #undef __FUNCT__ 1284e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite" 1285b412c318SBarry Smith PetscErrorCode DMCreateColoring_Composite(DM dm,ISColoringType ctype,ISColoring *coloring) 128647c6ae99SBarry Smith { 128747c6ae99SBarry Smith PetscErrorCode ierr; 128847c6ae99SBarry Smith PetscInt n,i,cnt; 128947c6ae99SBarry Smith ISColoringValue *colors; 129047c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 129147c6ae99SBarry Smith ISColoringValue maxcol = 0; 129247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 129347c6ae99SBarry Smith 129447c6ae99SBarry Smith PetscFunctionBegin; 129547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 1296ce94432eSBarry Smith if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported"); 1297e3247f34SBarry Smith else if (ctype == IS_COLORING_GLOBAL) { 129847c6ae99SBarry Smith n = com->n; 1299ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 1300785e854fSJed Brown ierr = PetscMalloc1(n,&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 130147c6ae99SBarry Smith 13020298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr); 130347c6ae99SBarry Smith if (dense) { 130447c6ae99SBarry Smith for (i=0; i<n; i++) { 130547c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 130647c6ae99SBarry Smith } 130747c6ae99SBarry Smith maxcol = com->N; 130847c6ae99SBarry Smith } else { 130947c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 131047c6ae99SBarry Smith PetscMPIInt rank; 131147c6ae99SBarry Smith 1312ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 131347c6ae99SBarry Smith cnt = 0; 131447c6ae99SBarry Smith while (next) { 131547c6ae99SBarry Smith ISColoring lcoloring; 131647c6ae99SBarry Smith 1317b412c318SBarry Smith ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,&lcoloring);CHKERRQ(ierr); 131847c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 131947c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 132047c6ae99SBarry Smith } 132147c6ae99SBarry Smith maxcol += lcoloring->n; 1322fcfd50ebSBarry Smith ierr = ISColoringDestroy(&lcoloring);CHKERRQ(ierr); 132347c6ae99SBarry Smith next = next->next; 132447c6ae99SBarry Smith } 132547c6ae99SBarry Smith } 1326ce94432eSBarry Smith ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,coloring);CHKERRQ(ierr); 132747c6ae99SBarry Smith PetscFunctionReturn(0); 132847c6ae99SBarry Smith } 132947c6ae99SBarry Smith 133047c6ae99SBarry Smith #undef __FUNCT__ 13310c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 13327087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 133347c6ae99SBarry Smith { 133447c6ae99SBarry Smith PetscErrorCode ierr; 133547c6ae99SBarry Smith struct DMCompositeLink *next; 133647c6ae99SBarry Smith PetscInt cnt = 3; 133747c6ae99SBarry Smith PetscMPIInt rank; 133847c6ae99SBarry Smith PetscScalar *garray,*larray; 133947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 134047c6ae99SBarry Smith 134147c6ae99SBarry Smith PetscFunctionBegin; 134247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 134347c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 134447c6ae99SBarry Smith next = com->next; 134547c6ae99SBarry Smith if (!com->setup) { 1346d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 134747c6ae99SBarry Smith } 1348ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 134947c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 135047c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 135147c6ae99SBarry Smith 135247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 135347c6ae99SBarry Smith while (next) { 135447c6ae99SBarry Smith Vec local,global; 135547c6ae99SBarry Smith PetscInt N; 135647c6ae99SBarry Smith 135747c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 135847c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 135947c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 136047c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 136147c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 136247c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 136347c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 136447c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 136547c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 136647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 136747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 136847c6ae99SBarry Smith cnt++; 136906ebdd98SJed Brown larray += next->nlocal; 137047c6ae99SBarry Smith next = next->next; 137147c6ae99SBarry Smith } 137247c6ae99SBarry Smith 13730298fd71SBarry Smith ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr); 13740298fd71SBarry Smith ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr); 137547c6ae99SBarry Smith PetscFunctionReturn(0); 137647c6ae99SBarry Smith } 137747c6ae99SBarry Smith 137847c6ae99SBarry Smith #undef __FUNCT__ 13790c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 13807087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 13810c010503SBarry Smith { 13820c010503SBarry Smith PetscFunctionBegin; 13830c010503SBarry Smith PetscFunctionReturn(0); 13840c010503SBarry Smith } 138547c6ae99SBarry Smith 13866ae3a549SBarry Smith /*MC 13876ae3a549SBarry Smith DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs 13886ae3a549SBarry Smith 13896ae3a549SBarry Smith Level: intermediate 13906ae3a549SBarry Smith 13916ae3a549SBarry Smith .seealso: DMType, DMCOMPOSITE, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate() 13926ae3a549SBarry Smith M*/ 13936ae3a549SBarry Smith 13946ae3a549SBarry Smith 1395a4121054SBarry Smith #undef __FUNCT__ 1396a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 13978cc058d9SJed Brown PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1398a4121054SBarry Smith { 1399a4121054SBarry Smith PetscErrorCode ierr; 1400a4121054SBarry Smith DM_Composite *com; 1401a4121054SBarry Smith 1402a4121054SBarry Smith PetscFunctionBegin; 1403b00a9115SJed Brown ierr = PetscNewLog(p,&com);CHKERRQ(ierr); 1404a4121054SBarry Smith p->data = com; 1405a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1406a4121054SBarry Smith com->n = 0; 14070298fd71SBarry Smith com->next = NULL; 1408a4121054SBarry Smith com->nDM = 0; 1409a4121054SBarry Smith 1410a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1411a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1412184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 14134d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 141416621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1415a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 141614354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 141725296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 141825296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1419e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1420a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1421a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1422a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1423a4121054SBarry Smith p->ops->view = DMView_Composite; 1424a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1425a4121054SBarry Smith PetscFunctionReturn(0); 1426a4121054SBarry Smith } 1427a4121054SBarry Smith 14280c010503SBarry Smith #undef __FUNCT__ 14290c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 14300c010503SBarry Smith /*@C 14310c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 14320c010503SBarry Smith vectors made up of several subvectors. 14330c010503SBarry Smith 14340c010503SBarry Smith Collective on MPI_Comm 143547c6ae99SBarry Smith 143647c6ae99SBarry Smith Input Parameter: 14370c010503SBarry Smith . comm - the processors that will share the global vector 14380c010503SBarry Smith 14390c010503SBarry Smith Output Parameters: 14400c010503SBarry Smith . packer - the packer object 144147c6ae99SBarry Smith 144247c6ae99SBarry Smith Level: advanced 144347c6ae99SBarry Smith 14449ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(), 14456eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 144647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 144747c6ae99SBarry Smith 144847c6ae99SBarry Smith @*/ 14497087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 145047c6ae99SBarry Smith { 14510c010503SBarry Smith PetscErrorCode ierr; 14520c010503SBarry Smith 145347c6ae99SBarry Smith PetscFunctionBegin; 14540c010503SBarry Smith PetscValidPointer(packer,2); 1455a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1456a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 145747c6ae99SBarry Smith PetscFunctionReturn(0); 145847c6ae99SBarry Smith } 1459