147c6ae99SBarry Smith #define PETSCDM_DLL 2e1589f56SBarry Smith #include "private/daimpl.h" /*I "petscdm.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith 547c6ae99SBarry Smith #undef __FUNCT__ 6aa219208SBarry Smith #define __FUNCT__ "DMDASetDim" 747c6ae99SBarry Smith /*@ 8aa219208SBarry Smith DMDASetDim - Sets the dimension 947c6ae99SBarry Smith 10aa219208SBarry Smith Collective on DMDA 1147c6ae99SBarry Smith 1247c6ae99SBarry Smith Input Parameters: 13aa219208SBarry Smith + da - the DMDA 1447c6ae99SBarry Smith - dim - the dimension (or PETSC_DECIDE) 1547c6ae99SBarry Smith 1647c6ae99SBarry Smith Level: intermediate 1747c6ae99SBarry Smith 18aa219208SBarry Smith .seealso: DaGetDim(), DMDASetSizes() 1947c6ae99SBarry Smith @*/ 20aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetDim(DM da, PetscInt dim) 2147c6ae99SBarry Smith { 2247c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 2347c6ae99SBarry Smith 2447c6ae99SBarry Smith PetscFunctionBegin; 2547c6ae99SBarry Smith PetscValidHeaderSpecific(da, DM_CLASSID, 1); 26aa219208SBarry Smith if (dd->dim > 0 && dim != dd->dim) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot change DMDA dim from %D after it was set to %D",dd->dim,dim); 2747c6ae99SBarry Smith dd->dim = dim; 2847c6ae99SBarry Smith PetscFunctionReturn(0); 2947c6ae99SBarry Smith } 3047c6ae99SBarry Smith 3147c6ae99SBarry Smith #undef __FUNCT__ 32aa219208SBarry Smith #define __FUNCT__ "DMDASetSizes" 3347c6ae99SBarry Smith /*@ 34aa219208SBarry Smith DMDASetSizes - Sets the global sizes 3547c6ae99SBarry Smith 36aa219208SBarry Smith Logically Collective on DMDA 3747c6ae99SBarry Smith 3847c6ae99SBarry Smith Input Parameters: 39aa219208SBarry Smith + da - the DMDA 4047c6ae99SBarry Smith . M - the global X size (or PETSC_DECIDE) 4147c6ae99SBarry Smith . N - the global Y size (or PETSC_DECIDE) 4247c6ae99SBarry Smith - P - the global Z size (or PETSC_DECIDE) 4347c6ae99SBarry Smith 4447c6ae99SBarry Smith Level: intermediate 4547c6ae99SBarry Smith 46aa219208SBarry Smith .seealso: DMDAGetSize(), PetscSplitOwnership() 4747c6ae99SBarry Smith @*/ 48aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetSizes(DM da, PetscInt M, PetscInt N, PetscInt P) 4947c6ae99SBarry Smith { 5047c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 5147c6ae99SBarry Smith 5247c6ae99SBarry Smith PetscFunctionBegin; 5347c6ae99SBarry Smith PetscValidHeaderSpecific(da, DM_CLASSID, 1); 5447c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,M,2); 5547c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,N,3); 5647c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,P,4); 5747c6ae99SBarry Smith 5847c6ae99SBarry Smith dd->M = M; 5947c6ae99SBarry Smith dd->N = N; 6047c6ae99SBarry Smith dd->P = P; 6147c6ae99SBarry Smith PetscFunctionReturn(0); 6247c6ae99SBarry Smith } 6347c6ae99SBarry Smith 6447c6ae99SBarry Smith #undef __FUNCT__ 65aa219208SBarry Smith #define __FUNCT__ "DMDASetNumProcs" 6647c6ae99SBarry Smith /*@ 67aa219208SBarry Smith DMDASetNumProcs - Sets the number of processes in each dimension 6847c6ae99SBarry Smith 69aa219208SBarry Smith Logically Collective on DMDA 7047c6ae99SBarry Smith 7147c6ae99SBarry Smith Input Parameters: 72aa219208SBarry Smith + da - the DMDA 7347c6ae99SBarry Smith . m - the number of X procs (or PETSC_DECIDE) 7447c6ae99SBarry Smith . n - the number of Y procs (or PETSC_DECIDE) 7547c6ae99SBarry Smith - p - the number of Z procs (or PETSC_DECIDE) 7647c6ae99SBarry Smith 7747c6ae99SBarry Smith Level: intermediate 7847c6ae99SBarry Smith 79aa219208SBarry Smith .seealso: DMDASetSizes(), DMDAGetSize(), PetscSplitOwnership() 8047c6ae99SBarry Smith @*/ 81aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetNumProcs(DM da, PetscInt m, PetscInt n, PetscInt p) 8247c6ae99SBarry Smith { 8347c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 8447c6ae99SBarry Smith 8547c6ae99SBarry Smith PetscFunctionBegin; 8647c6ae99SBarry Smith PetscValidHeaderSpecific(da, DM_CLASSID, 1); 8747c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,m,2); 8847c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,n,3); 8947c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,p,4); 9047c6ae99SBarry Smith dd->m = m; 9147c6ae99SBarry Smith dd->n = n; 9247c6ae99SBarry Smith dd->p = p; 9347c6ae99SBarry Smith PetscFunctionReturn(0); 9447c6ae99SBarry Smith } 9547c6ae99SBarry Smith 9647c6ae99SBarry Smith #undef __FUNCT__ 97aa219208SBarry Smith #define __FUNCT__ "DMDASetPeriodicity" 9847c6ae99SBarry Smith /*@ 99aa219208SBarry Smith DMDASetPeriodicity - Sets the type of periodicity 10047c6ae99SBarry Smith 10147c6ae99SBarry Smith Not collective 10247c6ae99SBarry Smith 10347c6ae99SBarry Smith Input Parameter: 104aa219208SBarry Smith + da - The DMDA 105aa219208SBarry Smith - ptype - One of DMDA_NONPERIODIC, DMDA_XPERIODIC, DMDA_YPERIODIC, DMDA_ZPERIODIC, DMDA_XYPERIODIC, DMDA_XZPERIODIC, DMDA_YZPERIODIC, or DMDA_XYZPERIODIC 10647c6ae99SBarry Smith 10747c6ae99SBarry Smith Level: intermediate 10847c6ae99SBarry Smith 10947c6ae99SBarry Smith .keywords: distributed array, periodicity 110aa219208SBarry Smith .seealso: DMDACreate(), DMDestroy(), DMDA, DMDAPeriodicType 11147c6ae99SBarry Smith @*/ 112aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetPeriodicity(DM da, DMDAPeriodicType ptype) 11347c6ae99SBarry Smith { 11447c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 11547c6ae99SBarry Smith 11647c6ae99SBarry Smith PetscFunctionBegin; 11747c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 11847c6ae99SBarry Smith dd->wrap = ptype; 11947c6ae99SBarry Smith PetscFunctionReturn(0); 12047c6ae99SBarry Smith } 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith #undef __FUNCT__ 123aa219208SBarry Smith #define __FUNCT__ "DMDASetDof" 12447c6ae99SBarry Smith /*@ 125aa219208SBarry Smith DMDASetDof - Sets the number of degrees of freedom per vertex 12647c6ae99SBarry Smith 12747c6ae99SBarry Smith Not collective 12847c6ae99SBarry Smith 12947c6ae99SBarry Smith Input Parameter: 130aa219208SBarry Smith + da - The DMDA 13147c6ae99SBarry Smith - dof - Number of degrees of freedom 13247c6ae99SBarry Smith 13347c6ae99SBarry Smith Level: intermediate 13447c6ae99SBarry Smith 13547c6ae99SBarry Smith .keywords: distributed array, degrees of freedom 136aa219208SBarry Smith .seealso: DMDACreate(), DMDestroy(), DMDA 13747c6ae99SBarry Smith @*/ 138aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetDof(DM da, int dof) 13947c6ae99SBarry Smith { 14047c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 14147c6ae99SBarry Smith 14247c6ae99SBarry Smith PetscFunctionBegin; 14347c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 14447c6ae99SBarry Smith dd->w = dof; 14547c6ae99SBarry Smith PetscFunctionReturn(0); 14647c6ae99SBarry Smith } 14747c6ae99SBarry Smith 14847c6ae99SBarry Smith #undef __FUNCT__ 149aa219208SBarry Smith #define __FUNCT__ "DMDASetStencilType" 15047c6ae99SBarry Smith /*@ 151aa219208SBarry Smith DMDASetStencilType - Sets the type of the communication stencil 15247c6ae99SBarry Smith 153aa219208SBarry Smith Logically Collective on DMDA 15447c6ae99SBarry Smith 15547c6ae99SBarry Smith Input Parameter: 156aa219208SBarry Smith + da - The DMDA 157aa219208SBarry Smith - stype - The stencil type, use either DMDA_STENCIL_BOX or DMDA_STENCIL_STAR. 15847c6ae99SBarry Smith 15947c6ae99SBarry Smith Level: intermediate 16047c6ae99SBarry Smith 16147c6ae99SBarry Smith .keywords: distributed array, stencil 162aa219208SBarry Smith .seealso: DMDACreate(), DMDestroy(), DMDA 16347c6ae99SBarry Smith @*/ 164aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetStencilType(DM da, DMDAStencilType stype) 16547c6ae99SBarry Smith { 16647c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 16747c6ae99SBarry Smith 16847c6ae99SBarry Smith PetscFunctionBegin; 16947c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 17047c6ae99SBarry Smith PetscValidLogicalCollectiveEnum(da,stype,2); 17147c6ae99SBarry Smith dd->stencil_type = stype; 17247c6ae99SBarry Smith PetscFunctionReturn(0); 17347c6ae99SBarry Smith } 17447c6ae99SBarry Smith 17547c6ae99SBarry Smith #undef __FUNCT__ 176aa219208SBarry Smith #define __FUNCT__ "DMDASetStencilWidth" 17747c6ae99SBarry Smith /*@ 178aa219208SBarry Smith DMDASetStencilWidth - Sets the width of the communication stencil 17947c6ae99SBarry Smith 180aa219208SBarry Smith Logically Collective on DMDA 18147c6ae99SBarry Smith 18247c6ae99SBarry Smith Input Parameter: 183aa219208SBarry Smith + da - The DMDA 18447c6ae99SBarry Smith - width - The stencil width 18547c6ae99SBarry Smith 18647c6ae99SBarry Smith Level: intermediate 18747c6ae99SBarry Smith 18847c6ae99SBarry Smith .keywords: distributed array, stencil 189aa219208SBarry Smith .seealso: DMDACreate(), DMDestroy(), DMDA 19047c6ae99SBarry Smith @*/ 191aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetStencilWidth(DM da, PetscInt width) 19247c6ae99SBarry Smith { 19347c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 19447c6ae99SBarry Smith 19547c6ae99SBarry Smith PetscFunctionBegin; 19647c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 19747c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,width,2); 19847c6ae99SBarry Smith dd->s = width; 19947c6ae99SBarry Smith PetscFunctionReturn(0); 20047c6ae99SBarry Smith } 20147c6ae99SBarry Smith 20247c6ae99SBarry Smith #undef __FUNCT__ 203aa219208SBarry Smith #define __FUNCT__ "DMDACheckOwnershipRanges_Private" 204aa219208SBarry Smith static PetscErrorCode DMDACheckOwnershipRanges_Private(DM da,PetscInt M,PetscInt m,const PetscInt lx[]) 20547c6ae99SBarry Smith { 20647c6ae99SBarry Smith PetscInt i,sum; 20747c6ae99SBarry Smith 20847c6ae99SBarry Smith PetscFunctionBegin; 20947c6ae99SBarry Smith if (M < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_WRONGSTATE,"Global dimension not set"); 21047c6ae99SBarry Smith for (i=sum=0; i<m; i++) sum += lx[i]; 21147c6ae99SBarry Smith if (sum != M) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"Ownership ranges sum to %D but global dimension is %D",sum,M); 21247c6ae99SBarry Smith PetscFunctionReturn(0); 21347c6ae99SBarry Smith } 21447c6ae99SBarry Smith 21547c6ae99SBarry Smith #undef __FUNCT__ 216aa219208SBarry Smith #define __FUNCT__ "DMDASetOwnershipRanges" 21747c6ae99SBarry Smith /*@ 218aa219208SBarry Smith DMDASetOwnershipRanges - Sets the number of nodes in each direction on each process 21947c6ae99SBarry Smith 220aa219208SBarry Smith Logically Collective on DMDA 22147c6ae99SBarry Smith 22247c6ae99SBarry Smith Input Parameter: 223aa219208SBarry Smith + da - The DMDA 22447c6ae99SBarry Smith . lx - array containing number of nodes in the X direction on each process, or PETSC_NULL. If non-null, must be of length da->m 22547c6ae99SBarry Smith . ly - array containing number of nodes in the Y direction on each process, or PETSC_NULL. If non-null, must be of length da->n 22647c6ae99SBarry Smith - lz - array containing number of nodes in the Z direction on each process, or PETSC_NULL. If non-null, must be of length da->p. 22747c6ae99SBarry Smith 22847c6ae99SBarry Smith Level: intermediate 22947c6ae99SBarry Smith 23047c6ae99SBarry Smith .keywords: distributed array 231aa219208SBarry Smith .seealso: DMDACreate(), DMDestroy(), DMDA 23247c6ae99SBarry Smith @*/ 233aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetOwnershipRanges(DM da, const PetscInt lx[], const PetscInt ly[], const PetscInt lz[]) 23447c6ae99SBarry Smith { 23547c6ae99SBarry Smith PetscErrorCode ierr; 23647c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 23747c6ae99SBarry Smith 23847c6ae99SBarry Smith PetscFunctionBegin; 23947c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 24047c6ae99SBarry Smith if (lx) { 24147c6ae99SBarry Smith if (dd->m < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot set ownership ranges before setting number of procs"); 242aa219208SBarry Smith ierr = DMDACheckOwnershipRanges_Private(da,dd->M,dd->m,lx);CHKERRQ(ierr); 24347c6ae99SBarry Smith if (!dd->lx) { 24447c6ae99SBarry Smith ierr = PetscMalloc(dd->m*sizeof(PetscInt), &dd->lx);CHKERRQ(ierr); 24547c6ae99SBarry Smith } 24647c6ae99SBarry Smith ierr = PetscMemcpy(dd->lx, lx, dd->m*sizeof(PetscInt));CHKERRQ(ierr); 24747c6ae99SBarry Smith } 24847c6ae99SBarry Smith if (ly) { 24947c6ae99SBarry Smith if (dd->n < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot set ownership ranges before setting number of procs"); 250aa219208SBarry Smith ierr = DMDACheckOwnershipRanges_Private(da,dd->N,dd->n,ly);CHKERRQ(ierr); 25147c6ae99SBarry Smith if (!dd->ly) { 25247c6ae99SBarry Smith ierr = PetscMalloc(dd->n*sizeof(PetscInt), &dd->ly);CHKERRQ(ierr); 25347c6ae99SBarry Smith } 25447c6ae99SBarry Smith ierr = PetscMemcpy(dd->ly, ly, dd->n*sizeof(PetscInt));CHKERRQ(ierr); 25547c6ae99SBarry Smith } 25647c6ae99SBarry Smith if (lz) { 25747c6ae99SBarry Smith if (dd->p < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot set ownership ranges before setting number of procs"); 258aa219208SBarry Smith ierr = DMDACheckOwnershipRanges_Private(da,dd->P,dd->p,lz);CHKERRQ(ierr); 25947c6ae99SBarry Smith if (!dd->lz) { 26047c6ae99SBarry Smith ierr = PetscMalloc(dd->p*sizeof(PetscInt), &dd->lz);CHKERRQ(ierr); 26147c6ae99SBarry Smith } 26247c6ae99SBarry Smith ierr = PetscMemcpy(dd->lz, lz, dd->p*sizeof(PetscInt));CHKERRQ(ierr); 26347c6ae99SBarry Smith } 26447c6ae99SBarry Smith PetscFunctionReturn(0); 26547c6ae99SBarry Smith } 26647c6ae99SBarry Smith 26747c6ae99SBarry Smith #undef __FUNCT__ 268aa219208SBarry Smith #define __FUNCT__ "DMDACreateOwnershipRanges" 26947c6ae99SBarry Smith /* 270aa219208SBarry Smith Ensure that da->lx, ly, and lz exist. Collective on DMDA. 27147c6ae99SBarry Smith */ 272aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDACreateOwnershipRanges(DM da) 27347c6ae99SBarry Smith { 27447c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 27547c6ae99SBarry Smith PetscErrorCode ierr; 27647c6ae99SBarry Smith PetscInt n; 27747c6ae99SBarry Smith MPI_Comm comm; 27847c6ae99SBarry Smith PetscMPIInt size; 27947c6ae99SBarry Smith 28047c6ae99SBarry Smith PetscFunctionBegin; 28147c6ae99SBarry Smith if (!dd->lx) { 28247c6ae99SBarry Smith ierr = PetscMalloc(dd->m*sizeof(PetscInt),&dd->lx);CHKERRQ(ierr); 283aa219208SBarry Smith ierr = DMDAGetProcessorSubset(da,DMDA_X,dd->xs,&comm);CHKERRQ(ierr); 28447c6ae99SBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 28547c6ae99SBarry Smith n = (dd->xe-dd->xs)/dd->w; 28647c6ae99SBarry Smith ierr = MPI_Allgather(&n,1,MPIU_INT,dd->lx,1,MPIU_INT,comm);CHKERRQ(ierr); 28747c6ae99SBarry Smith } 28847c6ae99SBarry Smith if (dd->dim > 1 && !dd->ly) { 28947c6ae99SBarry Smith ierr = PetscMalloc(dd->n*sizeof(PetscInt),&dd->ly);CHKERRQ(ierr); 290aa219208SBarry Smith ierr = DMDAGetProcessorSubset(da,DMDA_Y,dd->ys,&comm);CHKERRQ(ierr); 29147c6ae99SBarry Smith n = dd->ye-dd->ys; 29247c6ae99SBarry Smith ierr = MPI_Allgather(&n,1,MPIU_INT,dd->ly,1,MPIU_INT,comm);CHKERRQ(ierr); 29347c6ae99SBarry Smith } 29447c6ae99SBarry Smith if (dd->dim > 2 && !dd->lz) { 29547c6ae99SBarry Smith ierr = PetscMalloc(dd->p*sizeof(PetscInt),&dd->lz);CHKERRQ(ierr); 296aa219208SBarry Smith ierr = DMDAGetProcessorSubset(da,DMDA_Z,dd->zs,&comm);CHKERRQ(ierr); 29747c6ae99SBarry Smith n = dd->ze-dd->zs; 29847c6ae99SBarry Smith ierr = MPI_Allgather(&n,1,MPIU_INT,dd->lz,1,MPIU_INT,comm);CHKERRQ(ierr); 29947c6ae99SBarry Smith } 30047c6ae99SBarry Smith PetscFunctionReturn(0); 30147c6ae99SBarry Smith } 30247c6ae99SBarry Smith 30347c6ae99SBarry Smith #undef __FUNCT__ 304aa219208SBarry Smith #define __FUNCT__ "DMDASetInterpolationType" 30547c6ae99SBarry Smith /*@ 306aa219208SBarry Smith DMDASetInterpolationType - Sets the type of interpolation that will be 30794013140SBarry Smith returned by DMGetInterpolation() 30847c6ae99SBarry Smith 309aa219208SBarry Smith Logically Collective on DMDA 31047c6ae99SBarry Smith 31147c6ae99SBarry Smith Input Parameter: 31247c6ae99SBarry Smith + da - initial distributed array 313aa219208SBarry Smith . ctype - DMDA_Q1 and DMDA_Q0 are currently the only supported forms 31447c6ae99SBarry Smith 31547c6ae99SBarry Smith Level: intermediate 31647c6ae99SBarry Smith 317aa219208SBarry Smith Notes: you should call this on the coarser of the two DMDAs you pass to DMGetInterpolation() 31847c6ae99SBarry Smith 31947c6ae99SBarry Smith .keywords: distributed array, interpolation 32047c6ae99SBarry Smith 321aa219208SBarry Smith .seealso: DMDACreate1d(), DMDACreate2d(), DMDACreate3d(), DMDestroy(), DMDA, DMDAInterpolationType 32247c6ae99SBarry Smith @*/ 323aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetInterpolationType(DM da,DMDAInterpolationType ctype) 32447c6ae99SBarry Smith { 32547c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 32647c6ae99SBarry Smith 32747c6ae99SBarry Smith PetscFunctionBegin; 32847c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 32947c6ae99SBarry Smith PetscValidLogicalCollectiveEnum(da,ctype,2); 33047c6ae99SBarry Smith dd->interptype = ctype; 33147c6ae99SBarry Smith PetscFunctionReturn(0); 33247c6ae99SBarry Smith } 33347c6ae99SBarry Smith 33447c6ae99SBarry Smith 33547c6ae99SBarry Smith #undef __FUNCT__ 336aa219208SBarry Smith #define __FUNCT__ "DMDAGetNeighbors" 33747c6ae99SBarry Smith /*@C 338aa219208SBarry Smith DMDAGetNeighbors - Gets an array containing the MPI rank of all the current 33947c6ae99SBarry Smith processes neighbors. 34047c6ae99SBarry Smith 34147c6ae99SBarry Smith Not Collective 34247c6ae99SBarry Smith 34347c6ae99SBarry Smith Input Parameter: 344aa219208SBarry Smith . da - the DMDA object 34547c6ae99SBarry Smith 34647c6ae99SBarry Smith Output Parameters: 34747c6ae99SBarry Smith . ranks - the neighbors ranks, stored with the x index increasing most rapidly. 34847c6ae99SBarry Smith this process itself is in the list 34947c6ae99SBarry Smith 35047c6ae99SBarry Smith Notes: In 2d the array is of length 9, in 3d of length 27 35147c6ae99SBarry Smith Not supported in 1d 352aa219208SBarry Smith Do not free the array, it is freed when the DMDA is destroyed. 35347c6ae99SBarry Smith 35447c6ae99SBarry Smith Fortran Notes: In fortran you must pass in an array of the appropriate length. 35547c6ae99SBarry Smith 35647c6ae99SBarry Smith Level: intermediate 35747c6ae99SBarry Smith 35847c6ae99SBarry Smith @*/ 359aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDAGetNeighbors(DM da,const PetscMPIInt *ranks[]) 36047c6ae99SBarry Smith { 36147c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 36247c6ae99SBarry Smith PetscFunctionBegin; 36347c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 36447c6ae99SBarry Smith *ranks = dd->neighbors; 36547c6ae99SBarry Smith PetscFunctionReturn(0); 36647c6ae99SBarry Smith } 36747c6ae99SBarry Smith 36847c6ae99SBarry Smith /*@C 369aa219208SBarry Smith DMDASetElementType - Sets the element type to be returned by DMGetElements() 37047c6ae99SBarry Smith 37147c6ae99SBarry Smith Not Collective 37247c6ae99SBarry Smith 37347c6ae99SBarry Smith Input Parameter: 374aa219208SBarry Smith . da - the DMDA object 37547c6ae99SBarry Smith 37647c6ae99SBarry Smith Output Parameters: 377aa219208SBarry Smith . etype - the element type, currently either DMDA_ELEMENT_P1 or ELEMENT_Q1 37847c6ae99SBarry Smith 37947c6ae99SBarry Smith Level: intermediate 38047c6ae99SBarry Smith 381aa219208SBarry Smith .seealso: DMDAElementType, DMDAGetElementType(), DMGetElements(), DMRestoreElements() 38247c6ae99SBarry Smith @*/ 38347c6ae99SBarry Smith #undef __FUNCT__ 384aa219208SBarry Smith #define __FUNCT__ "DMDASetElementType" 385aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetElementType(DM da, DMDAElementType etype) 38647c6ae99SBarry Smith { 38747c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 38847c6ae99SBarry Smith PetscErrorCode ierr; 38947c6ae99SBarry Smith 39047c6ae99SBarry Smith PetscFunctionBegin; 39147c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 39247c6ae99SBarry Smith PetscValidLogicalCollectiveEnum(da,etype,2); 39347c6ae99SBarry Smith if (dd->elementtype != etype) { 39447c6ae99SBarry Smith ierr = PetscFree(dd->e);CHKERRQ(ierr); 39547c6ae99SBarry Smith dd->elementtype = etype; 39647c6ae99SBarry Smith dd->ne = 0; 39747c6ae99SBarry Smith dd->e = PETSC_NULL; 39847c6ae99SBarry Smith } 39947c6ae99SBarry Smith PetscFunctionReturn(0); 40047c6ae99SBarry Smith } 40147c6ae99SBarry Smith 40247c6ae99SBarry Smith /*@C 403aa219208SBarry Smith DMDAGetElementType - Gets the element type to be returned by DMGetElements() 40447c6ae99SBarry Smith 40547c6ae99SBarry Smith Not Collective 40647c6ae99SBarry Smith 40747c6ae99SBarry Smith Input Parameter: 408aa219208SBarry Smith . da - the DMDA object 40947c6ae99SBarry Smith 41047c6ae99SBarry Smith Output Parameters: 411aa219208SBarry Smith . etype - the element type, currently either DMDA_ELEMENT_P1 or ELEMENT_Q1 41247c6ae99SBarry Smith 41347c6ae99SBarry Smith Level: intermediate 41447c6ae99SBarry Smith 415aa219208SBarry Smith .seealso: DMDAElementType, DMDASetElementType(), DMGetElements(), DMRestoreElements() 41647c6ae99SBarry Smith @*/ 41747c6ae99SBarry Smith #undef __FUNCT__ 418aa219208SBarry Smith #define __FUNCT__ "DMDAGetElementType" 419aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDAGetElementType(DM da, DMDAElementType *etype) 42047c6ae99SBarry Smith { 42147c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 42247c6ae99SBarry Smith PetscFunctionBegin; 42347c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 42447c6ae99SBarry Smith PetscValidPointer(etype,2); 42547c6ae99SBarry Smith *etype = dd->elementtype; 42647c6ae99SBarry Smith PetscFunctionReturn(0); 42747c6ae99SBarry Smith } 42847c6ae99SBarry Smith 42947c6ae99SBarry Smith #undef __FUNCT__ 43047c6ae99SBarry Smith #define __FUNCT__ "DMGetElements" 43147c6ae99SBarry Smith /*@C 43247c6ae99SBarry Smith DMGetElements - Gets an array containing the indices (in local coordinates) 43347c6ae99SBarry Smith of all the local elements 43447c6ae99SBarry Smith 43547c6ae99SBarry Smith Not Collective 43647c6ae99SBarry Smith 43747c6ae99SBarry Smith Input Parameter: 43847c6ae99SBarry Smith . dm - the DM object 43947c6ae99SBarry Smith 44047c6ae99SBarry Smith Output Parameters: 44147c6ae99SBarry Smith + n - number of local elements 44247c6ae99SBarry Smith - e - the indices of the elements vertices 44347c6ae99SBarry Smith 44447c6ae99SBarry Smith Level: intermediate 44547c6ae99SBarry Smith 44647c6ae99SBarry Smith .seealso: DMElementType, DMSetElementType(), DMRestoreElements() 44747c6ae99SBarry Smith @*/ 44847c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetElements(DM dm,PetscInt *n,const PetscInt *e[]) 44947c6ae99SBarry Smith { 45047c6ae99SBarry Smith PetscErrorCode ierr; 45147c6ae99SBarry Smith PetscFunctionBegin; 45247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 45347c6ae99SBarry Smith ierr = (dm->ops->getelements)(dm,n,e);CHKERRQ(ierr); 45447c6ae99SBarry Smith PetscFunctionReturn(0); 45547c6ae99SBarry Smith } 45647c6ae99SBarry Smith 45747c6ae99SBarry Smith #undef __FUNCT__ 45847c6ae99SBarry Smith #define __FUNCT__ "DMRestoreElements" 45947c6ae99SBarry Smith /*@C 46047c6ae99SBarry Smith DMRestoreElements - Returns an array containing the indices (in local coordinates) 46147c6ae99SBarry Smith of all the local elements obtained with DMGetElements() 46247c6ae99SBarry Smith 46347c6ae99SBarry Smith Not Collective 46447c6ae99SBarry Smith 46547c6ae99SBarry Smith Input Parameter: 46647c6ae99SBarry Smith + dm - the DM object 46747c6ae99SBarry Smith . n - number of local elements 46847c6ae99SBarry Smith - e - the indices of the elements vertices 46947c6ae99SBarry Smith 47047c6ae99SBarry Smith Level: intermediate 47147c6ae99SBarry Smith 47247c6ae99SBarry Smith .seealso: DMElementType, DMSetElementType(), DMGetElements() 47347c6ae99SBarry Smith @*/ 47447c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMRestoreElements(DM dm,PetscInt *n,const PetscInt *e[]) 47547c6ae99SBarry Smith { 47647c6ae99SBarry Smith PetscErrorCode ierr; 47747c6ae99SBarry Smith PetscFunctionBegin; 47847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 47947c6ae99SBarry Smith if (dm->ops->restoreelements) { 48047c6ae99SBarry Smith ierr = (dm->ops->restoreelements)(dm,n,e);CHKERRQ(ierr); 48147c6ae99SBarry Smith } 48247c6ae99SBarry Smith PetscFunctionReturn(0); 48347c6ae99SBarry Smith } 48447c6ae99SBarry Smith 48547c6ae99SBarry Smith #undef __FUNCT__ 486aa219208SBarry Smith #define __FUNCT__ "DMDAGetOwnershipRanges" 48747c6ae99SBarry Smith /*@C 488aa219208SBarry Smith DMDAGetOwnershipRanges - Gets the ranges of indices in the x, y and z direction that are owned by each process 48947c6ae99SBarry Smith 49047c6ae99SBarry Smith Not Collective 49147c6ae99SBarry Smith 49247c6ae99SBarry Smith Input Parameter: 493aa219208SBarry Smith . da - the DMDA object 49447c6ae99SBarry Smith 49547c6ae99SBarry Smith Output Parameter: 49647c6ae99SBarry Smith + lx - ownership along x direction (optional) 49747c6ae99SBarry Smith . ly - ownership along y direction (optional) 49847c6ae99SBarry Smith - lz - ownership along z direction (optional) 49947c6ae99SBarry Smith 50047c6ae99SBarry Smith Level: intermediate 50147c6ae99SBarry Smith 502aa219208SBarry Smith Note: these correspond to the optional final arguments passed to DMDACreate(), DMDACreate2d(), DMDACreate3d() 50347c6ae99SBarry Smith 50447c6ae99SBarry Smith In Fortran one must pass in arrays lx, ly, and lz that are long enough to hold the values; the sixth, seventh and 505aa219208SBarry Smith eighth arguments from DMDAGetInfo() 50647c6ae99SBarry Smith 50747c6ae99SBarry Smith In C you should not free these arrays, nor change the values in them. They will only have valid values while the 508aa219208SBarry Smith DMDA they came from still exists (has not been destroyed). 50947c6ae99SBarry Smith 510aa219208SBarry Smith .seealso: DMDAGetCorners(), DMDAGetGhostCorners(), DMDACreate(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d(), VecGetOwnershipRanges() 51147c6ae99SBarry Smith @*/ 512aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDAGetOwnershipRanges(DM da,const PetscInt *lx[],const PetscInt *ly[],const PetscInt *lz[]) 51347c6ae99SBarry Smith { 51447c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 51547c6ae99SBarry Smith 51647c6ae99SBarry Smith PetscFunctionBegin; 51747c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 51847c6ae99SBarry Smith if (lx) *lx = dd->lx; 51947c6ae99SBarry Smith if (ly) *ly = dd->ly; 52047c6ae99SBarry Smith if (lz) *lz = dd->lz; 52147c6ae99SBarry Smith PetscFunctionReturn(0); 52247c6ae99SBarry Smith } 52347c6ae99SBarry Smith 52447c6ae99SBarry Smith #undef __FUNCT__ 525aa219208SBarry Smith #define __FUNCT__ "DMDASetRefinementFactor" 52647c6ae99SBarry Smith /*@ 527aa219208SBarry Smith DMDASetRefinementFactor - Set the ratios that the DMDA grid is refined 52847c6ae99SBarry Smith 529aa219208SBarry Smith Logically Collective on DMDA 53047c6ae99SBarry Smith 53147c6ae99SBarry Smith Input Parameters: 532aa219208SBarry Smith + da - the DMDA object 53347c6ae99SBarry Smith . refine_x - ratio of fine grid to coarse in x direction (2 by default) 53447c6ae99SBarry Smith . refine_y - ratio of fine grid to coarse in y direction (2 by default) 53547c6ae99SBarry Smith - refine_z - ratio of fine grid to coarse in z direction (2 by default) 53647c6ae99SBarry Smith 53747c6ae99SBarry Smith Options Database: 53847c6ae99SBarry Smith + -da_refine_x - refinement ratio in x direction 53947c6ae99SBarry Smith . -da_refine_y - refinement ratio in y direction 54047c6ae99SBarry Smith - -da_refine_z - refinement ratio in z direction 54147c6ae99SBarry Smith 54247c6ae99SBarry Smith Level: intermediate 54347c6ae99SBarry Smith 54447c6ae99SBarry Smith Notes: Pass PETSC_IGNORE to leave a value unchanged 54547c6ae99SBarry Smith 546aa219208SBarry Smith .seealso: DMRefine(), DMDAGetRefinementFactor() 54747c6ae99SBarry Smith @*/ 548aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetRefinementFactor(DM da, PetscInt refine_x, PetscInt refine_y,PetscInt refine_z) 54947c6ae99SBarry Smith { 55047c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 55147c6ae99SBarry Smith 55247c6ae99SBarry Smith PetscFunctionBegin; 55347c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 55447c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,refine_x,2); 55547c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,refine_y,3); 55647c6ae99SBarry Smith PetscValidLogicalCollectiveInt(da,refine_z,4); 55747c6ae99SBarry Smith 55847c6ae99SBarry Smith if (refine_x > 0) dd->refine_x = refine_x; 55947c6ae99SBarry Smith if (refine_y > 0) dd->refine_y = refine_y; 56047c6ae99SBarry Smith if (refine_z > 0) dd->refine_z = refine_z; 56147c6ae99SBarry Smith PetscFunctionReturn(0); 56247c6ae99SBarry Smith } 56347c6ae99SBarry Smith 56447c6ae99SBarry Smith #undef __FUNCT__ 565aa219208SBarry Smith #define __FUNCT__ "DMDAGetRefinementFactor" 56647c6ae99SBarry Smith /*@C 567aa219208SBarry Smith DMDAGetRefinementFactor - Gets the ratios that the DMDA grid is refined 56847c6ae99SBarry Smith 56947c6ae99SBarry Smith Not Collective 57047c6ae99SBarry Smith 57147c6ae99SBarry Smith Input Parameter: 572aa219208SBarry Smith . da - the DMDA object 57347c6ae99SBarry Smith 57447c6ae99SBarry Smith Output Parameters: 57547c6ae99SBarry Smith + refine_x - ratio of fine grid to coarse in x direction (2 by default) 57647c6ae99SBarry Smith . refine_y - ratio of fine grid to coarse in y direction (2 by default) 57747c6ae99SBarry Smith - refine_z - ratio of fine grid to coarse in z direction (2 by default) 57847c6ae99SBarry Smith 57947c6ae99SBarry Smith Level: intermediate 58047c6ae99SBarry Smith 58147c6ae99SBarry Smith Notes: Pass PETSC_NULL for values you do not need 58247c6ae99SBarry Smith 583aa219208SBarry Smith .seealso: DMRefine(), DMDASetRefinementFactor() 58447c6ae99SBarry Smith @*/ 585aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDAGetRefinementFactor(DM da, PetscInt *refine_x, PetscInt *refine_y,PetscInt *refine_z) 58647c6ae99SBarry Smith { 58747c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 58847c6ae99SBarry Smith 58947c6ae99SBarry Smith PetscFunctionBegin; 59047c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 59147c6ae99SBarry Smith if (refine_x) *refine_x = dd->refine_x; 59247c6ae99SBarry Smith if (refine_y) *refine_y = dd->refine_y; 59347c6ae99SBarry Smith if (refine_z) *refine_z = dd->refine_z; 59447c6ae99SBarry Smith PetscFunctionReturn(0); 59547c6ae99SBarry Smith } 59647c6ae99SBarry Smith 59747c6ae99SBarry Smith #undef __FUNCT__ 598aa219208SBarry Smith #define __FUNCT__ "DMDASetGetMatrix" 59947c6ae99SBarry Smith /*@C 600aa219208SBarry Smith DMDASetGetMatrix - Sets the routine used by the DMDA to allocate a matrix. 60147c6ae99SBarry Smith 602aa219208SBarry Smith Logically Collective on DMDA 60347c6ae99SBarry Smith 60447c6ae99SBarry Smith Input Parameters: 605aa219208SBarry Smith + da - the DMDA object 606aa219208SBarry Smith - f - the function that allocates the matrix for that specific DMDA 60747c6ae99SBarry Smith 60847c6ae99SBarry Smith Level: developer 60947c6ae99SBarry Smith 610aa219208SBarry Smith Notes: See DMDASetBlockFills() that provides a simple way to provide the nonzero structure for 61147c6ae99SBarry Smith the diagonal and off-diagonal blocks of the matrix 61247c6ae99SBarry Smith 613aa219208SBarry Smith .seealso: DMGetMatrix(), DMDASetBlockFills() 61447c6ae99SBarry Smith @*/ 615aa219208SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDASetGetMatrix(DM da,PetscErrorCode (*f)(DM, const MatType,Mat*)) 61647c6ae99SBarry Smith { 61747c6ae99SBarry Smith PetscFunctionBegin; 61847c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 61947c6ae99SBarry Smith da->ops->getmatrix = f; 62047c6ae99SBarry Smith PetscFunctionReturn(0); 62147c6ae99SBarry Smith } 62247c6ae99SBarry Smith 62347c6ae99SBarry Smith #undef __FUNCT__ 62494013140SBarry Smith #define __FUNCT__ "DMDARefineOwnershipRanges" 62547c6ae99SBarry Smith /* 62647c6ae99SBarry Smith Creates "balanced" ownership ranges after refinement, constrained by the need for the 62747c6ae99SBarry Smith fine grid boundaries to fall within one stencil width of the coarse partition. 62847c6ae99SBarry Smith 62947c6ae99SBarry Smith Uses a greedy algorithm to handle non-ideal layouts, could probably do something better. 63047c6ae99SBarry Smith */ 63194013140SBarry Smith static PetscErrorCode DMDARefineOwnershipRanges(DM da,PetscBool periodic,PetscInt stencil_width,PetscInt ratio,PetscInt m,const PetscInt lc[],PetscInt lf[]) 63247c6ae99SBarry Smith { 63347c6ae99SBarry Smith PetscInt i,totalc = 0,remaining,startc = 0,startf = 0; 63447c6ae99SBarry Smith PetscErrorCode ierr; 63547c6ae99SBarry Smith 63647c6ae99SBarry Smith PetscFunctionBegin; 63747c6ae99SBarry Smith if (ratio < 1) SETERRQ1(((PetscObject)da)->comm,PETSC_ERR_USER,"Requested refinement ratio %D must be at least 1",ratio); 63847c6ae99SBarry Smith if (ratio == 1) { 63947c6ae99SBarry Smith ierr = PetscMemcpy(lf,lc,m*sizeof(lc[0]));CHKERRQ(ierr); 64047c6ae99SBarry Smith PetscFunctionReturn(0); 64147c6ae99SBarry Smith } 64247c6ae99SBarry Smith for (i=0; i<m; i++) totalc += lc[i]; 64347c6ae99SBarry Smith remaining = (!periodic) + ratio * (totalc - (!periodic)); 64447c6ae99SBarry Smith for (i=0; i<m; i++) { 64547c6ae99SBarry Smith PetscInt want = remaining/(m-i) + !!(remaining%(m-i)); 64647c6ae99SBarry Smith if (i == m-1) lf[i] = want; 64747c6ae99SBarry Smith else { 6487aca7175SJed Brown const PetscInt nextc = startc + lc[i]; 6497aca7175SJed Brown /* Move the first fine node of the next subdomain to the right until the coarse node on its left is within one 6507aca7175SJed Brown * coarse stencil width of the first coarse node in the next subdomain. */ 6517aca7175SJed Brown while ((startf+want)/ratio < nextc - stencil_width) want++; 6527aca7175SJed Brown /* Move the last fine node in the current subdomain to the left until the coarse node on its right is within one 6537aca7175SJed Brown * coarse stencil width of the last coarse node in the current subdomain. */ 6547aca7175SJed Brown while ((startf+want-1+ratio-1)/ratio > nextc-1+stencil_width) want--; 6557aca7175SJed Brown /* Make sure all constraints are satisfied */ 6567aca7175SJed Brown if (want < 0 || want > remaining 6577aca7175SJed Brown || ((startf+want)/ratio < nextc - stencil_width) 6587aca7175SJed Brown || ((startf+want-1+ratio-1)/ratio > nextc-1+stencil_width)) 6597aca7175SJed Brown SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_SIZ,"Could not find a compatible refined ownership range"); 66047c6ae99SBarry Smith } 66147c6ae99SBarry Smith lf[i] = want; 66247c6ae99SBarry Smith startc += lc[i]; 66347c6ae99SBarry Smith startf += lf[i]; 66447c6ae99SBarry Smith remaining -= lf[i]; 66547c6ae99SBarry Smith } 66647c6ae99SBarry Smith PetscFunctionReturn(0); 66747c6ae99SBarry Smith } 66847c6ae99SBarry Smith 66947c6ae99SBarry Smith #undef __FUNCT__ 670*2be375d4SJed Brown #define __FUNCT__ "DMDACoarsenOwnershipRanges" 671*2be375d4SJed Brown /* 672*2be375d4SJed Brown Creates "balanced" ownership ranges after coarsening, constrained by the need for the 673*2be375d4SJed Brown fine grid boundaries to fall within one stencil width of the coarse partition. 674*2be375d4SJed Brown 675*2be375d4SJed Brown Uses a greedy algorithm to handle non-ideal layouts, could probably do something better. 676*2be375d4SJed Brown */ 677*2be375d4SJed Brown static PetscErrorCode DMDACoarsenOwnershipRanges(DM da,PetscBool periodic,PetscInt stencil_width,PetscInt ratio,PetscInt m,const PetscInt lf[],PetscInt lc[]) 678*2be375d4SJed Brown { 679*2be375d4SJed Brown PetscInt i,totalf,remaining,startc,startf; 680*2be375d4SJed Brown PetscErrorCode ierr; 681*2be375d4SJed Brown 682*2be375d4SJed Brown PetscFunctionBegin; 683*2be375d4SJed Brown if (ratio < 1) SETERRQ1(((PetscObject)da)->comm,PETSC_ERR_USER,"Requested refinement ratio %D must be at least 1",ratio); 684*2be375d4SJed Brown if (ratio == 1) { 685*2be375d4SJed Brown ierr = PetscMemcpy(lc,lf,m*sizeof(lf[0]));CHKERRQ(ierr); 686*2be375d4SJed Brown PetscFunctionReturn(0); 687*2be375d4SJed Brown } 688*2be375d4SJed Brown for (i=0,totalf=0; i<m; i++) totalf += lf[i]; 689*2be375d4SJed Brown remaining = (!periodic) + (totalf - (!periodic)) / ratio; 690*2be375d4SJed Brown for (i=0,startc=0,startf=0; i<m; i++) { 691*2be375d4SJed Brown PetscInt want = remaining/(m-i) + !!(remaining%(m-i)); 692*2be375d4SJed Brown if (i == m-1) lc[i] = want; 693*2be375d4SJed Brown else { 694*2be375d4SJed Brown const PetscInt nextf = startf+lf[i]; 695*2be375d4SJed Brown /* Slide first coarse node of next subdomain to the left until the coarse node to the left of the first fine 696*2be375d4SJed Brown * node is within one stencil width. */ 697*2be375d4SJed Brown while (nextf/ratio < startc+want-stencil_width) want--; 698*2be375d4SJed Brown /* Slide the last coarse node of the current subdomain to the right until the coarse node to the right of the last 699*2be375d4SJed Brown * fine node is within one stencil width. */ 700*2be375d4SJed Brown while ((nextf-1+ratio-1)/ratio > startc+want-1+stencil_width) want++; 701*2be375d4SJed Brown if (want < 0 || want > remaining 702*2be375d4SJed Brown || (nextf/ratio < startc+want-stencil_width) 703*2be375d4SJed Brown || ((nextf-1+ratio-1)/ratio > startc+want-1+stencil_width)) 704*2be375d4SJed Brown SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_SIZ,"Could not find a compatible coarsened ownership range"); 705*2be375d4SJed Brown } 706*2be375d4SJed Brown lc[i] = want; 707*2be375d4SJed Brown startc += lc[i]; 708*2be375d4SJed Brown startf += lf[i]; 709*2be375d4SJed Brown remaining -= lc[i]; 710*2be375d4SJed Brown } 711*2be375d4SJed Brown PetscFunctionReturn(0); 712*2be375d4SJed Brown } 713*2be375d4SJed Brown 714*2be375d4SJed Brown #undef __FUNCT__ 71594013140SBarry Smith #define __FUNCT__ "DMRefine_DA" 71694013140SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMRefine_DA(DM da,MPI_Comm comm,DM *daref) 71747c6ae99SBarry Smith { 71847c6ae99SBarry Smith PetscErrorCode ierr; 71947c6ae99SBarry Smith PetscInt M,N,P; 7209a42bb27SBarry Smith DM da2; 72147c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data,*dd2; 72247c6ae99SBarry Smith 72347c6ae99SBarry Smith PetscFunctionBegin; 72447c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 72547c6ae99SBarry Smith PetscValidPointer(daref,3); 72647c6ae99SBarry Smith 727aa219208SBarry Smith if (DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 72847c6ae99SBarry Smith M = dd->refine_x*dd->M; 72947c6ae99SBarry Smith } else { 73047c6ae99SBarry Smith M = 1 + dd->refine_x*(dd->M - 1); 73147c6ae99SBarry Smith } 732aa219208SBarry Smith if (DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 73347c6ae99SBarry Smith N = dd->refine_y*dd->N; 73447c6ae99SBarry Smith } else { 73547c6ae99SBarry Smith N = 1 + dd->refine_y*(dd->N - 1); 73647c6ae99SBarry Smith } 737aa219208SBarry Smith if (DMDAZPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 73847c6ae99SBarry Smith P = dd->refine_z*dd->P; 73947c6ae99SBarry Smith } else { 74047c6ae99SBarry Smith P = 1 + dd->refine_z*(dd->P - 1); 74147c6ae99SBarry Smith } 742aa219208SBarry Smith ierr = DMDACreateOwnershipRanges(da);CHKERRQ(ierr); 74347c6ae99SBarry Smith if (dd->dim == 3) { 74447c6ae99SBarry Smith PetscInt *lx,*ly,*lz; 74547c6ae99SBarry Smith ierr = PetscMalloc3(dd->m,PetscInt,&lx,dd->n,PetscInt,&ly,dd->p,PetscInt,&lz);CHKERRQ(ierr); 746aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 747aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_y,dd->n,dd->ly,ly);CHKERRQ(ierr); 748aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAZPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_z,dd->p,dd->lz,lz);CHKERRQ(ierr); 749aa219208SBarry Smith ierr = DMDACreate3d(((PetscObject)da)->comm,dd->wrap,dd->stencil_type,M,N,P,dd->m,dd->n,dd->p,dd->w,dd->s,lx,ly,lz,&da2);CHKERRQ(ierr); 75047c6ae99SBarry Smith ierr = PetscFree3(lx,ly,lz);CHKERRQ(ierr); 75147c6ae99SBarry Smith } else if (dd->dim == 2) { 75247c6ae99SBarry Smith PetscInt *lx,*ly; 75347c6ae99SBarry Smith ierr = PetscMalloc2(dd->m,PetscInt,&lx,dd->n,PetscInt,&ly);CHKERRQ(ierr); 754aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 755aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_y,dd->n,dd->ly,ly);CHKERRQ(ierr); 756aa219208SBarry Smith ierr = DMDACreate2d(((PetscObject)da)->comm,dd->wrap,dd->stencil_type,M,N,dd->m,dd->n,dd->w,dd->s,lx,ly,&da2);CHKERRQ(ierr); 75747c6ae99SBarry Smith ierr = PetscFree2(lx,ly);CHKERRQ(ierr); 75847c6ae99SBarry Smith } else if (dd->dim == 1) { 75947c6ae99SBarry Smith PetscInt *lx; 76047c6ae99SBarry Smith ierr = PetscMalloc(dd->m*sizeof(PetscInt),&lx);CHKERRQ(ierr); 761aa219208SBarry Smith ierr = DMDARefineOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 762aa219208SBarry Smith ierr = DMDACreate1d(((PetscObject)da)->comm,dd->wrap,M,dd->w,dd->s,lx,&da2);CHKERRQ(ierr); 76347c6ae99SBarry Smith ierr = PetscFree(lx);CHKERRQ(ierr); 76447c6ae99SBarry Smith } 76547c6ae99SBarry Smith dd2 = (DM_DA*)da2->data; 76647c6ae99SBarry Smith 76747c6ae99SBarry Smith /* allow overloaded (user replaced) operations to be inherited by refinement clones */ 76847c6ae99SBarry Smith da2->ops->getmatrix = da->ops->getmatrix; 76947c6ae99SBarry Smith da2->ops->getinterpolation = da->ops->getinterpolation; 77047c6ae99SBarry Smith da2->ops->getcoloring = da->ops->getcoloring; 77147c6ae99SBarry Smith dd2->interptype = dd->interptype; 77247c6ae99SBarry Smith 77347c6ae99SBarry Smith /* copy fill information if given */ 77447c6ae99SBarry Smith if (dd->dfill) { 77547c6ae99SBarry Smith ierr = PetscMalloc((dd->dfill[dd->w]+dd->w+1)*sizeof(PetscInt),&dd2->dfill);CHKERRQ(ierr); 77647c6ae99SBarry Smith ierr = PetscMemcpy(dd2->dfill,dd->dfill,(dd->dfill[dd->w]+dd->w+1)*sizeof(PetscInt));CHKERRQ(ierr); 77747c6ae99SBarry Smith } 77847c6ae99SBarry Smith if (dd->ofill) { 77947c6ae99SBarry Smith ierr = PetscMalloc((dd->ofill[dd->w]+dd->w+1)*sizeof(PetscInt),&dd2->ofill);CHKERRQ(ierr); 78047c6ae99SBarry Smith ierr = PetscMemcpy(dd2->ofill,dd->ofill,(dd->ofill[dd->w]+dd->w+1)*sizeof(PetscInt));CHKERRQ(ierr); 78147c6ae99SBarry Smith } 78247c6ae99SBarry Smith /* copy the refine information */ 78347c6ae99SBarry Smith dd2->refine_x = dd->refine_x; 78447c6ae99SBarry Smith dd2->refine_y = dd->refine_y; 78547c6ae99SBarry Smith dd2->refine_z = dd->refine_z; 78647c6ae99SBarry Smith 78747c6ae99SBarry Smith /* copy vector type information */ 78847c6ae99SBarry Smith ierr = PetscFree(da2->vectype);CHKERRQ(ierr); 78947c6ae99SBarry Smith ierr = PetscStrallocpy(da->vectype,&da2->vectype);CHKERRQ(ierr); 79047c6ae99SBarry Smith *daref = da2; 79147c6ae99SBarry Smith PetscFunctionReturn(0); 79247c6ae99SBarry Smith } 79347c6ae99SBarry Smith 79447c6ae99SBarry Smith #undef __FUNCT__ 79594013140SBarry Smith #define __FUNCT__ "DMCoarsen_DA" 79694013140SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCoarsen_DA(DM da, MPI_Comm comm,DM *daref) 79747c6ae99SBarry Smith { 79847c6ae99SBarry Smith PetscErrorCode ierr; 79947c6ae99SBarry Smith PetscInt M,N,P; 8009a42bb27SBarry Smith DM da2; 80147c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data,*dd2; 80247c6ae99SBarry Smith 80347c6ae99SBarry Smith PetscFunctionBegin; 80447c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 80547c6ae99SBarry Smith PetscValidPointer(daref,3); 80647c6ae99SBarry Smith 807aa219208SBarry Smith if (DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 80847c6ae99SBarry Smith M = dd->M / dd->refine_x; 80947c6ae99SBarry Smith } else { 81047c6ae99SBarry Smith M = 1 + (dd->M - 1) / dd->refine_x; 81147c6ae99SBarry Smith } 812aa219208SBarry Smith if (DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 81347c6ae99SBarry Smith N = dd->N / dd->refine_y; 81447c6ae99SBarry Smith } else { 81547c6ae99SBarry Smith N = 1 + (dd->N - 1) / dd->refine_y; 81647c6ae99SBarry Smith } 817aa219208SBarry Smith if (DMDAZPeriodic(dd->wrap) || dd->interptype == DMDA_Q0){ 81847c6ae99SBarry Smith P = dd->P / dd->refine_z; 81947c6ae99SBarry Smith } else { 82047c6ae99SBarry Smith P = 1 + (dd->P - 1) / dd->refine_z; 82147c6ae99SBarry Smith } 822*2be375d4SJed Brown ierr = DMDACreateOwnershipRanges(da);CHKERRQ(ierr); 82347c6ae99SBarry Smith if (dd->dim == 3) { 824*2be375d4SJed Brown PetscInt *lx,*ly,*lz; 825*2be375d4SJed Brown ierr = PetscMalloc3(dd->m,PetscInt,&lx,dd->n,PetscInt,&ly,dd->p,PetscInt,&lz);CHKERRQ(ierr); 826*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 827*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_y,dd->n,dd->ly,ly);CHKERRQ(ierr); 828*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAZPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_z,dd->p,dd->lz,lz);CHKERRQ(ierr); 829*2be375d4SJed Brown ierr = DMDACreate3d(((PetscObject)da)->comm,dd->wrap,dd->stencil_type,M,N,P,dd->m,dd->n,dd->p,dd->w,dd->s,lx,ly,lz,&da2);CHKERRQ(ierr); 830*2be375d4SJed Brown ierr = PetscFree3(lx,ly,lz);CHKERRQ(ierr); 83147c6ae99SBarry Smith } else if (dd->dim == 2) { 832*2be375d4SJed Brown PetscInt *lx,*ly; 833*2be375d4SJed Brown ierr = PetscMalloc2(dd->m,PetscInt,&lx,dd->n,PetscInt,&ly);CHKERRQ(ierr); 834*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 835*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAYPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_y,dd->n,dd->ly,ly);CHKERRQ(ierr); 836*2be375d4SJed Brown ierr = DMDACreate2d(((PetscObject)da)->comm,dd->wrap,dd->stencil_type,M,N,dd->m,dd->n,dd->w,dd->s,lx,ly,&da2);CHKERRQ(ierr); 837*2be375d4SJed Brown ierr = PetscFree2(lx,ly);CHKERRQ(ierr); 83847c6ae99SBarry Smith } else if (dd->dim == 1) { 839*2be375d4SJed Brown PetscInt *lx; 840*2be375d4SJed Brown ierr = PetscMalloc(dd->m*sizeof(PetscInt),&lx);CHKERRQ(ierr); 841*2be375d4SJed Brown ierr = DMDACoarsenOwnershipRanges(da,(PetscBool)(DMDAXPeriodic(dd->wrap) || dd->interptype == DMDA_Q0),dd->s,dd->refine_x,dd->m,dd->lx,lx);CHKERRQ(ierr); 842*2be375d4SJed Brown ierr = DMDACreate1d(((PetscObject)da)->comm,dd->wrap,M,dd->w,dd->s,lx,&da2);CHKERRQ(ierr); 843*2be375d4SJed Brown ierr = PetscFree(lx);CHKERRQ(ierr); 84447c6ae99SBarry Smith } 84547c6ae99SBarry Smith dd2 = (DM_DA*)da2->data; 84647c6ae99SBarry Smith 84747c6ae99SBarry Smith /* allow overloaded (user replaced) operations to be inherited by refinement clones */ 84847c6ae99SBarry Smith da2->ops->getmatrix = da->ops->getmatrix; 84947c6ae99SBarry Smith da2->ops->getinterpolation = da->ops->getinterpolation; 85047c6ae99SBarry Smith da2->ops->getcoloring = da->ops->getcoloring; 85147c6ae99SBarry Smith dd2->interptype = dd->interptype; 85247c6ae99SBarry Smith 85347c6ae99SBarry Smith /* copy fill information if given */ 85447c6ae99SBarry Smith if (dd->dfill) { 85547c6ae99SBarry Smith ierr = PetscMalloc((dd->dfill[dd->w]+dd->w+1)*sizeof(PetscInt),&dd2->dfill);CHKERRQ(ierr); 85647c6ae99SBarry Smith ierr = PetscMemcpy(dd2->dfill,dd->dfill,(dd->dfill[dd->w]+dd->w+1)*sizeof(PetscInt));CHKERRQ(ierr); 85747c6ae99SBarry Smith } 85847c6ae99SBarry Smith if (dd->ofill) { 85947c6ae99SBarry Smith ierr = PetscMalloc((dd->ofill[dd->w]+dd->w+1)*sizeof(PetscInt),&dd2->ofill);CHKERRQ(ierr); 86047c6ae99SBarry Smith ierr = PetscMemcpy(dd2->ofill,dd->ofill,(dd->ofill[dd->w]+dd->w+1)*sizeof(PetscInt));CHKERRQ(ierr); 86147c6ae99SBarry Smith } 86247c6ae99SBarry Smith /* copy the refine information */ 86347c6ae99SBarry Smith dd2->refine_x = dd->refine_x; 86447c6ae99SBarry Smith dd2->refine_y = dd->refine_y; 86547c6ae99SBarry Smith dd2->refine_z = dd->refine_z; 86647c6ae99SBarry Smith 86747c6ae99SBarry Smith /* copy vector type information */ 86847c6ae99SBarry Smith ierr = PetscFree(da2->vectype);CHKERRQ(ierr); 86947c6ae99SBarry Smith ierr = PetscStrallocpy(da->vectype,&da2->vectype);CHKERRQ(ierr); 87047c6ae99SBarry Smith 87147c6ae99SBarry Smith *daref = da2; 87247c6ae99SBarry Smith PetscFunctionReturn(0); 87347c6ae99SBarry Smith } 87447c6ae99SBarry Smith 87547c6ae99SBarry Smith #undef __FUNCT__ 87694013140SBarry Smith #define __FUNCT__ "DMRefineHierarchy_DA" 87794013140SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMRefineHierarchy_DA(DM da,PetscInt nlevels,DM daf[]) 87847c6ae99SBarry Smith { 87947c6ae99SBarry Smith PetscErrorCode ierr; 88047c6ae99SBarry Smith PetscInt i,n,*refx,*refy,*refz; 88147c6ae99SBarry Smith 88247c6ae99SBarry Smith PetscFunctionBegin; 88347c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 88447c6ae99SBarry Smith if (nlevels < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_OUTOFRANGE,"nlevels cannot be negative"); 88547c6ae99SBarry Smith if (nlevels == 0) PetscFunctionReturn(0); 88647c6ae99SBarry Smith PetscValidPointer(daf,3); 88747c6ae99SBarry Smith 888aa219208SBarry Smith /* Get refinement factors, defaults taken from the coarse DMDA */ 88947c6ae99SBarry Smith ierr = PetscMalloc3(nlevels,PetscInt,&refx,nlevels,PetscInt,&refy,nlevels,PetscInt,&refz);CHKERRQ(ierr); 89047c6ae99SBarry Smith for (i=0; i<nlevels; i++) { 891aa219208SBarry Smith ierr = DMDAGetRefinementFactor(da,&refx[i],&refy[i],&refz[i]);CHKERRQ(ierr); 89247c6ae99SBarry Smith } 89347c6ae99SBarry Smith n = nlevels; 89447c6ae99SBarry Smith ierr = PetscOptionsGetIntArray(((PetscObject)da)->prefix,"-da_refine_hierarchy_x",refx,&n,PETSC_NULL);CHKERRQ(ierr); 89547c6ae99SBarry Smith n = nlevels; 89647c6ae99SBarry Smith ierr = PetscOptionsGetIntArray(((PetscObject)da)->prefix,"-da_refine_hierarchy_y",refy,&n,PETSC_NULL);CHKERRQ(ierr); 89747c6ae99SBarry Smith n = nlevels; 89847c6ae99SBarry Smith ierr = PetscOptionsGetIntArray(((PetscObject)da)->prefix,"-da_refine_hierarchy_z",refz,&n,PETSC_NULL);CHKERRQ(ierr); 89947c6ae99SBarry Smith 900aa219208SBarry Smith ierr = DMDASetRefinementFactor(da,refx[0],refy[0],refz[0]);CHKERRQ(ierr); 90194013140SBarry Smith ierr = DMRefine(da,((PetscObject)da)->comm,&daf[0]);CHKERRQ(ierr); 90247c6ae99SBarry Smith for (i=1; i<nlevels; i++) { 903aa219208SBarry Smith ierr = DMDASetRefinementFactor(daf[i-1],refx[i],refy[i],refz[i]);CHKERRQ(ierr); 90494013140SBarry Smith ierr = DMRefine(daf[i-1],((PetscObject)da)->comm,&daf[i]);CHKERRQ(ierr); 90547c6ae99SBarry Smith } 90647c6ae99SBarry Smith ierr = PetscFree3(refx,refy,refz);CHKERRQ(ierr); 90747c6ae99SBarry Smith PetscFunctionReturn(0); 90847c6ae99SBarry Smith } 90947c6ae99SBarry Smith 91047c6ae99SBarry Smith #undef __FUNCT__ 91194013140SBarry Smith #define __FUNCT__ "DMCoarsenHierarchy_DA" 91294013140SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCoarsenHierarchy_DA(DM da,PetscInt nlevels,DM dac[]) 91347c6ae99SBarry Smith { 91447c6ae99SBarry Smith PetscErrorCode ierr; 91547c6ae99SBarry Smith PetscInt i; 91647c6ae99SBarry Smith 91747c6ae99SBarry Smith PetscFunctionBegin; 91847c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 91947c6ae99SBarry Smith if (nlevels < 0) SETERRQ(((PetscObject)da)->comm,PETSC_ERR_ARG_OUTOFRANGE,"nlevels cannot be negative"); 92047c6ae99SBarry Smith if (nlevels == 0) PetscFunctionReturn(0); 92147c6ae99SBarry Smith PetscValidPointer(dac,3); 92294013140SBarry Smith ierr = DMCoarsen(da,((PetscObject)da)->comm,&dac[0]);CHKERRQ(ierr); 92347c6ae99SBarry Smith for (i=1; i<nlevels; i++) { 92494013140SBarry Smith ierr = DMCoarsen(dac[i-1],((PetscObject)da)->comm,&dac[i]);CHKERRQ(ierr); 92547c6ae99SBarry Smith } 92647c6ae99SBarry Smith PetscFunctionReturn(0); 92747c6ae99SBarry Smith } 928