17d0a6c19SBarry Smith 2c6db04a5SJed Brown #include <private/daimpl.h> /*I "petscdmda.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith #undef __FUNCT__ 59a42bb27SBarry Smith #define __FUNCT__ "DMSetFromOptions_DA" 67087cfbeSBarry Smith PetscErrorCode DMSetFromOptions_DA(DM da) 747c6ae99SBarry Smith { 847c6ae99SBarry Smith PetscErrorCode ierr; 947c6ae99SBarry Smith PetscBool flg; 1047c6ae99SBarry Smith char typeName[256]; 1147c6ae99SBarry Smith DM_DA *dd = (DM_DA*)da->data; 12*e0f5d30fSBarry Smith PetscInt refine = 0; 13*e0f5d30fSBarry Smith PetscBool negativeMNP = PETSC_FALSE; 1447c6ae99SBarry Smith 1547c6ae99SBarry Smith PetscFunctionBegin; 1647c6ae99SBarry Smith PetscValidHeaderSpecific(da,DM_CLASSID,1); 1747c6ae99SBarry Smith 18aa219208SBarry Smith ierr = PetscOptionsBegin(((PetscObject)da)->comm,((PetscObject)da)->prefix,"DMDA Options","DMDA");CHKERRQ(ierr); 19aa219208SBarry Smith /* Handle DMDA grid sizes */ 2047c6ae99SBarry Smith if (dd->M < 0) { 2147c6ae99SBarry Smith PetscInt newM = -dd->M; 22aa219208SBarry Smith ierr = PetscOptionsInt("-da_grid_x","Number of grid points in x direction","DMDASetSizes",newM,&newM,PETSC_NULL);CHKERRQ(ierr); 2347c6ae99SBarry Smith dd->M = newM; 24*e0f5d30fSBarry Smith negativeMNP = PETSC_TRUE; 2547c6ae99SBarry Smith } 2647c6ae99SBarry Smith if (dd->dim > 1 && dd->N < 0) { 2747c6ae99SBarry Smith PetscInt newN = -dd->N; 28aa219208SBarry Smith ierr = PetscOptionsInt("-da_grid_y","Number of grid points in y direction","DMDASetSizes",newN,&newN,PETSC_NULL);CHKERRQ(ierr); 2947c6ae99SBarry Smith dd->N = newN; 30*e0f5d30fSBarry Smith negativeMNP = PETSC_TRUE; 3147c6ae99SBarry Smith } 3247c6ae99SBarry Smith if (dd->dim > 2 && dd->P < 0) { 3347c6ae99SBarry Smith PetscInt newP = -dd->P; 34aa219208SBarry Smith ierr = PetscOptionsInt("-da_grid_z","Number of grid points in z direction","DMDASetSizes",newP,&newP,PETSC_NULL);CHKERRQ(ierr); 3547c6ae99SBarry Smith dd->P = newP; 36*e0f5d30fSBarry Smith negativeMNP = PETSC_TRUE; 3747c6ae99SBarry Smith } 38aa219208SBarry Smith /* Handle DMDA parallel distibution */ 39aa219208SBarry Smith ierr = PetscOptionsInt("-da_processors_x","Number of processors in x direction","DMDASetNumProcs",dd->m,&dd->m,PETSC_NULL);CHKERRQ(ierr); 40aa219208SBarry Smith if (dd->dim > 1) {ierr = PetscOptionsInt("-da_processors_y","Number of processors in y direction","DMDASetNumProcs",dd->n,&dd->n,PETSC_NULL);CHKERRQ(ierr);} 41aa219208SBarry Smith if (dd->dim > 2) {ierr = PetscOptionsInt("-da_processors_z","Number of processors in z direction","DMDASetNumProcs",dd->p,&dd->p,PETSC_NULL);CHKERRQ(ierr);} 42aa219208SBarry Smith /* Handle DMDA refinement */ 43aa219208SBarry Smith ierr = PetscOptionsInt("-da_refine_x","Refinement ratio in x direction","DMDASetRefinementFactor",dd->refine_x,&dd->refine_x,PETSC_NULL);CHKERRQ(ierr); 44aa219208SBarry Smith if (dd->dim > 1) {ierr = PetscOptionsInt("-da_refine_y","Refinement ratio in y direction","DMDASetRefinementFactor",dd->refine_y,&dd->refine_y,PETSC_NULL);CHKERRQ(ierr);} 45aa219208SBarry Smith if (dd->dim > 2) {ierr = PetscOptionsInt("-da_refine_z","Refinement ratio in z direction","DMDASetRefinementFactor",dd->refine_z,&dd->refine_z,PETSC_NULL);CHKERRQ(ierr);} 4647c6ae99SBarry Smith 4747c6ae99SBarry Smith if (!VecRegisterAllCalled) {ierr = VecRegisterAll(PETSC_NULL);CHKERRQ(ierr);} 489a42bb27SBarry Smith ierr = PetscOptionsList("-da_vec_type","Vector type used for created vectors","DMSetVecType",VecList,da->vectype,typeName,256,&flg);CHKERRQ(ierr); 4947c6ae99SBarry Smith if (flg) { 509a42bb27SBarry Smith ierr = DMSetVecType(da,typeName);CHKERRQ(ierr); 5147c6ae99SBarry Smith } 5247c6ae99SBarry Smith 53*e0f5d30fSBarry Smith if (negativeMNP) { 54*e0f5d30fSBarry Smith ierr = PetscOptionsInt("-da_refine","Uniformly refine DA one or more times","None",refine,&refine,PETSC_NULL);CHKERRQ(ierr); 55*e0f5d30fSBarry Smith while (refine--) { 56*e0f5d30fSBarry Smith if (dd->bx == DMDA_BOUNDARY_PERIODIC || dd->interptype == DMDA_Q0){ 57*e0f5d30fSBarry Smith dd->M = dd->refine_x*dd->M; 58*e0f5d30fSBarry Smith } else { 59*e0f5d30fSBarry Smith dd->M = 1 + dd->refine_x*(dd->M - 1); 60*e0f5d30fSBarry Smith } 61*e0f5d30fSBarry Smith if (dd->by == DMDA_BOUNDARY_PERIODIC || dd->interptype == DMDA_Q0){ 62*e0f5d30fSBarry Smith dd->N = dd->refine_y*dd->N; 63*e0f5d30fSBarry Smith } else { 64*e0f5d30fSBarry Smith dd->N = 1 + dd->refine_y*(dd->N - 1); 65*e0f5d30fSBarry Smith } 66*e0f5d30fSBarry Smith if (dd->bz == DMDA_BOUNDARY_PERIODIC || dd->interptype == DMDA_Q0){ 67*e0f5d30fSBarry Smith dd->P = dd->refine_z*dd->P; 68*e0f5d30fSBarry Smith } else { 69*e0f5d30fSBarry Smith dd->P = 1 + dd->refine_z*(dd->P - 1); 70*e0f5d30fSBarry Smith } 71*e0f5d30fSBarry Smith da->levelup++; 72*e0f5d30fSBarry Smith } 73*e0f5d30fSBarry Smith } 74*e0f5d30fSBarry Smith 75*e0f5d30fSBarry Smith 7647c6ae99SBarry Smith /* process any options handlers added with PetscObjectAddOptionsHandler() */ 7747c6ae99SBarry Smith ierr = PetscObjectProcessOptionsHandlers((PetscObject)da);CHKERRQ(ierr); 7847c6ae99SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 7947c6ae99SBarry Smith 8047c6ae99SBarry Smith PetscFunctionReturn(0); 8147c6ae99SBarry Smith } 8247c6ae99SBarry Smith 837087cfbeSBarry Smith extern PetscErrorCode DMCreateGlobalVector_DA(DM,Vec*); 847087cfbeSBarry Smith extern PetscErrorCode DMCreateLocalVector_DA(DM,Vec*); 857087cfbeSBarry Smith extern PetscErrorCode DMGlobalToLocalBegin_DA(DM,Vec,InsertMode,Vec); 867087cfbeSBarry Smith extern PetscErrorCode DMGlobalToLocalEnd_DA(DM,Vec,InsertMode,Vec); 877087cfbeSBarry Smith extern PetscErrorCode DMLocalToGlobalBegin_DA(DM,Vec,InsertMode,Vec); 887087cfbeSBarry Smith extern PetscErrorCode DMLocalToGlobalEnd_DA(DM,Vec,InsertMode,Vec); 897087cfbeSBarry Smith extern PetscErrorCode DMGetInterpolation_DA(DM,DM,Mat*,Vec*); 907087cfbeSBarry Smith extern PetscErrorCode DMGetColoring_DA(DM,ISColoringType,const MatType,ISColoring*); 917087cfbeSBarry Smith extern PetscErrorCode DMGetMatrix_DA(DM,const MatType,Mat*); 927087cfbeSBarry Smith extern PetscErrorCode DMRefine_DA(DM,MPI_Comm,DM*); 937087cfbeSBarry Smith extern PetscErrorCode DMCoarsen_DA(DM,MPI_Comm,DM*); 947087cfbeSBarry Smith extern PetscErrorCode DMRefineHierarchy_DA(DM,PetscInt,DM[]); 957087cfbeSBarry Smith extern PetscErrorCode DMCoarsenHierarchy_DA(DM,PetscInt,DM[]); 967087cfbeSBarry Smith extern PetscErrorCode DMGetInjection_DA(DM,DM,VecScatter*); 977087cfbeSBarry Smith extern PetscErrorCode DMGetAggregates_DA(DM,DM,Mat*); 987087cfbeSBarry Smith extern PetscErrorCode DMView_DA(DM,PetscViewer); 997087cfbeSBarry Smith extern PetscErrorCode DMSetUp_DA(DM); 1007087cfbeSBarry Smith extern PetscErrorCode DMDestroy_DA(DM); 1019a42bb27SBarry Smith 102a4121054SBarry Smith EXTERN_C_BEGIN 10347c6ae99SBarry Smith #undef __FUNCT__ 104a4121054SBarry Smith #define __FUNCT__ "DMCreate_DA" 1057087cfbeSBarry Smith PetscErrorCode DMCreate_DA(DM da) 10647c6ae99SBarry Smith { 10747c6ae99SBarry Smith PetscErrorCode ierr; 10847c6ae99SBarry Smith DM_DA *dd; 10947c6ae99SBarry Smith 11047c6ae99SBarry Smith PetscFunctionBegin; 111a4121054SBarry Smith PetscValidPointer(da,1); 112a4121054SBarry Smith ierr = PetscNewLog(da,DM_DA,&dd);CHKERRQ(ierr); 113a4121054SBarry Smith da->data = dd; 11447c6ae99SBarry Smith 11547c6ae99SBarry Smith dd->dim = -1; 116aa219208SBarry Smith dd->interptype = DMDA_Q1; 11747c6ae99SBarry Smith dd->refine_x = 2; 11847c6ae99SBarry Smith dd->refine_y = 2; 11947c6ae99SBarry Smith dd->refine_z = 2; 12047c6ae99SBarry Smith dd->fieldname = PETSC_NULL; 12147c6ae99SBarry Smith dd->nlocal = -1; 12247c6ae99SBarry Smith dd->Nlocal = -1; 12347c6ae99SBarry Smith dd->M = -1; 12447c6ae99SBarry Smith dd->N = -1; 12547c6ae99SBarry Smith dd->P = -1; 12647c6ae99SBarry Smith dd->m = -1; 12747c6ae99SBarry Smith dd->n = -1; 12847c6ae99SBarry Smith dd->p = -1; 12947c6ae99SBarry Smith dd->w = -1; 13047c6ae99SBarry Smith dd->s = -1; 13147c6ae99SBarry Smith dd->xs = -1; dd->xe = -1; dd->ys = -1; dd->ye = -1; dd->zs = -1; dd->ze = -1; 13247c6ae99SBarry Smith dd->Xs = -1; dd->Xe = -1; dd->Ys = -1; dd->Ye = -1; dd->Zs = -1; dd->Ze = -1; 13347c6ae99SBarry Smith 13447c6ae99SBarry Smith dd->gtol = PETSC_NULL; 13547c6ae99SBarry Smith dd->ltog = PETSC_NULL; 13647c6ae99SBarry Smith dd->ltol = PETSC_NULL; 13747c6ae99SBarry Smith dd->ao = PETSC_NULL; 13847c6ae99SBarry Smith dd->base = -1; 1391321219cSEthan Coon dd->bx = DMDA_BOUNDARY_NONE; 1401321219cSEthan Coon dd->by = DMDA_BOUNDARY_NONE; 1411321219cSEthan Coon dd->bz = DMDA_BOUNDARY_NONE; 142aa219208SBarry Smith dd->stencil_type = DMDA_STENCIL_BOX; 143aa219208SBarry Smith dd->interptype = DMDA_Q1; 14447c6ae99SBarry Smith dd->idx = PETSC_NULL; 14547c6ae99SBarry Smith dd->Nl = -1; 14647c6ae99SBarry Smith dd->lx = PETSC_NULL; 14747c6ae99SBarry Smith dd->ly = PETSC_NULL; 14847c6ae99SBarry Smith dd->lz = PETSC_NULL; 14947c6ae99SBarry Smith 150454e267fSLisandro Dalcin dd->elementtype = DMDA_ELEMENT_Q1; 151454e267fSLisandro Dalcin 152a4121054SBarry Smith ierr = PetscStrallocpy(VECSTANDARD,&da->vectype);CHKERRQ(ierr); 153a4121054SBarry Smith da->ops->globaltolocalbegin = DMGlobalToLocalBegin_DA; 154a4121054SBarry Smith da->ops->globaltolocalend = DMGlobalToLocalEnd_DA; 155a4121054SBarry Smith da->ops->localtoglobalbegin = DMLocalToGlobalBegin_DA; 156a4121054SBarry Smith da->ops->localtoglobalend = DMLocalToGlobalEnd_DA; 157a4121054SBarry Smith da->ops->createglobalvector = DMCreateGlobalVector_DA; 158a4121054SBarry Smith da->ops->createlocalvector = DMCreateLocalVector_DA; 159a4121054SBarry Smith da->ops->getinterpolation = DMGetInterpolation_DA; 160a4121054SBarry Smith da->ops->getcoloring = DMGetColoring_DA; 161a4121054SBarry Smith da->ops->getmatrix = DMGetMatrix_DA; 162a4121054SBarry Smith da->ops->refine = DMRefine_DA; 163a4121054SBarry Smith da->ops->coarsen = DMCoarsen_DA; 164a4121054SBarry Smith da->ops->refinehierarchy = DMRefineHierarchy_DA; 165a4121054SBarry Smith da->ops->coarsenhierarchy = DMCoarsenHierarchy_DA; 166a4121054SBarry Smith da->ops->getinjection = DMGetInjection_DA; 167a4121054SBarry Smith da->ops->getaggregates = DMGetAggregates_DA; 168a4121054SBarry Smith da->ops->destroy = DMDestroy_DA; 169a4121054SBarry Smith da->ops->view = 0; 170a4121054SBarry Smith da->ops->setfromoptions = DMSetFromOptions_DA; 171a4121054SBarry Smith da->ops->setup = DMSetUp_DA; 172a4121054SBarry Smith PetscFunctionReturn(0); 173a4121054SBarry Smith } 174a4121054SBarry Smith EXTERN_C_END 17547c6ae99SBarry Smith 176a4121054SBarry Smith #undef __FUNCT__ 177a4121054SBarry Smith #define __FUNCT__ "DMDACreate" 178a4121054SBarry Smith /*@ 179a4121054SBarry Smith DMDACreate - Creates a DMDA object. 180a4121054SBarry Smith 181a4121054SBarry Smith Collective on MPI_Comm 182a4121054SBarry Smith 183a4121054SBarry Smith Input Parameter: 184a4121054SBarry Smith . comm - The communicator for the DMDA object 185a4121054SBarry Smith 186a4121054SBarry Smith Output Parameter: 187a4121054SBarry Smith . da - The DMDA object 188a4121054SBarry Smith 189*e0f5d30fSBarry Smith Level: advanced 190*e0f5d30fSBarry Smith 191*e0f5d30fSBarry Smith Developers Note: Since there exists DMDACreate1/2/3d() should this routine even exist? 192a4121054SBarry Smith 193a4121054SBarry Smith .keywords: DMDA, create 194*e0f5d30fSBarry Smith .seealso: DMDASetSizes(), DMDADuplicate(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d() 195a4121054SBarry Smith @*/ 1967087cfbeSBarry Smith PetscErrorCode DMDACreate(MPI_Comm comm, DM *da) 197a4121054SBarry Smith { 198a4121054SBarry Smith PetscErrorCode ierr; 199a4121054SBarry Smith 200a4121054SBarry Smith PetscFunctionBegin; 201a4121054SBarry Smith PetscValidPointer(da,2); 202a4121054SBarry Smith ierr = DMCreate(comm,da);CHKERRQ(ierr); 203a4121054SBarry Smith ierr = DMSetType(*da,DMDA);CHKERRQ(ierr); 20447c6ae99SBarry Smith PetscFunctionReturn(0); 20547c6ae99SBarry Smith } 206