xref: /petsc/src/dm/impls/da/dageometry.c (revision 9371c9d470a9602b6d10a8bf50c9b2280a79e45a)

#include <petscsf.h>
#include <petsc/private/dmdaimpl.h> /*I  "petscdmda.h"   I*/

/*@
  DMDAConvertToCell - Convert (i,j,k) to local cell number

  Not Collective

  Input Parameters:
+ da - the distributed array
- s - A MatStencil giving (i,j,k)

  Output Parameter:
. cell - the local cell number

  Level: developer
@*/
PetscErrorCode DMDAConvertToCell(DM dm, MatStencil s, PetscInt *cell) {
  DM_DA         *da  = (DM_DA *)dm->data;
  const PetscInt dim = dm->dim;
  const PetscInt mx = (da->Xe - da->Xs) / da->w, my = da->Ye - da->Ys /*, mz = da->Ze - da->Zs*/;
  const PetscInt il = s.i - da->Xs / da->w, jl = dim > 1 ? s.j - da->Ys : 0, kl = dim > 2 ? s.k - da->Zs : 0;

  PetscFunctionBegin;
  *cell = -1;
  PetscCheck(!(s.i < da->Xs / da->w) && !(s.i >= da->Xe / da->w), PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Stencil i %" PetscInt_FMT " should be in [%" PetscInt_FMT ", %" PetscInt_FMT ")", s.i, da->Xs / da->w, da->Xe / da->w);
  PetscCheck(dim <= 1 || (s.j >= da->Ys && s.j < da->Ye), PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Stencil j %" PetscInt_FMT " should be in [%" PetscInt_FMT ", %" PetscInt_FMT ")", s.j, da->Ys, da->Ye);
  PetscCheck(dim <= 2 || (s.k >= da->Zs && s.k < da->Ze), PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Stencil k %" PetscInt_FMT " should be in [%" PetscInt_FMT ", %" PetscInt_FMT ")", s.k, da->Zs, da->Ze);
  *cell = (kl * my + jl) * mx + il;
  PetscFunctionReturn(0);
}

PetscErrorCode private_DMDALocatePointsIS_2D_Regular(DM dmregular, Vec pos, IS *iscell) {
  PetscInt           n, bs, p, npoints;
  PetscInt           xs, xe, Xs, Xe, mxlocal;
  PetscInt           ys, ye, Ys, Ye, mylocal;
  PetscInt           d, c0, c1;
  PetscReal          gmin_l[2], gmax_l[2], dx[2];
  PetscReal          gmin[2], gmax[2];
  PetscInt          *cellidx;
  Vec                coor;
  const PetscScalar *_coor;

  PetscFunctionBegin;
  PetscCall(DMDAGetCorners(dmregular, &xs, &ys, NULL, &xe, &ye, NULL));
  PetscCall(DMDAGetGhostCorners(dmregular, &Xs, &Ys, NULL, &Xe, &Ye, NULL));
  xe += xs;
  Xe += Xs;
  if (xs != Xs) xs -= 1;
  ye += ys;
  Ye += Ys;
  if (ys != Ys) ys -= 1;

  mxlocal = xe - xs - 1;
  mylocal = ye - ys - 1;

  PetscCall(DMGetCoordinatesLocal(dmregular, &coor));
  PetscCall(VecGetArrayRead(coor, &_coor));
  c0 = (xs - Xs) + (ys - Ys) * (Xe - Xs);
  c1 = (xe - 2 - Xs + 1) + (ye - 2 - Ys + 1) * (Xe - Xs);

  gmin_l[0] = PetscRealPart(_coor[2 * c0 + 0]);
  gmin_l[1] = PetscRealPart(_coor[2 * c0 + 1]);

  gmax_l[0] = PetscRealPart(_coor[2 * c1 + 0]);
  gmax_l[1] = PetscRealPart(_coor[2 * c1 + 1]);

  dx[0] = (gmax_l[0] - gmin_l[0]) / ((PetscReal)mxlocal);
  dx[1] = (gmax_l[1] - gmin_l[1]) / ((PetscReal)mylocal);

  PetscCall(VecRestoreArrayRead(coor, &_coor));

  PetscCall(DMGetBoundingBox(dmregular, gmin, gmax));

  PetscCall(VecGetLocalSize(pos, &n));
  PetscCall(VecGetBlockSize(pos, &bs));
  npoints = n / bs;

  PetscCall(PetscMalloc1(npoints, &cellidx));
  PetscCall(VecGetArrayRead(pos, &_coor));
  for (p = 0; p < npoints; p++) {
    PetscReal coor_p[2];
    PetscInt  mi[2];

    coor_p[0] = PetscRealPart(_coor[2 * p]);
    coor_p[1] = PetscRealPart(_coor[2 * p + 1]);

    cellidx[p] = DMLOCATEPOINT_POINT_NOT_FOUND;

    if (coor_p[0] < gmin_l[0]) { continue; }
    if (coor_p[0] > gmax_l[0]) { continue; }
    if (coor_p[1] < gmin_l[1]) { continue; }
    if (coor_p[1] > gmax_l[1]) { continue; }

    for (d = 0; d < 2; d++) { mi[d] = (PetscInt)((coor_p[d] - gmin[d]) / dx[d]); }

    if (mi[0] < xs) { continue; }
    if (mi[0] > (xe - 1)) { continue; }
    if (mi[1] < ys) { continue; }
    if (mi[1] > (ye - 1)) { continue; }

    if (mi[0] == (xe - 1)) { mi[0]--; }
    if (mi[1] == (ye - 1)) { mi[1]--; }

    cellidx[p] = (mi[0] - xs) + (mi[1] - ys) * mxlocal;
  }
  PetscCall(VecRestoreArrayRead(pos, &_coor));
  PetscCall(ISCreateGeneral(PETSC_COMM_SELF, npoints, cellidx, PETSC_OWN_POINTER, iscell));
  PetscFunctionReturn(0);
}

PetscErrorCode private_DMDALocatePointsIS_3D_Regular(DM dmregular, Vec pos, IS *iscell) {
  PetscInt           n, bs, p, npoints;
  PetscInt           xs, xe, Xs, Xe, mxlocal;
  PetscInt           ys, ye, Ys, Ye, mylocal;
  PetscInt           zs, ze, Zs, Ze, mzlocal;
  PetscInt           d, c0, c1;
  PetscReal          gmin_l[3], gmax_l[3], dx[3];
  PetscReal          gmin[3], gmax[3];
  PetscInt          *cellidx;
  Vec                coor;
  const PetscScalar *_coor;

  PetscFunctionBegin;
  PetscCall(DMDAGetCorners(dmregular, &xs, &ys, &zs, &xe, &ye, &ze));
  PetscCall(DMDAGetGhostCorners(dmregular, &Xs, &Ys, &Zs, &Xe, &Ye, &Ze));
  xe += xs;
  Xe += Xs;
  if (xs != Xs) xs -= 1;
  ye += ys;
  Ye += Ys;
  if (ys != Ys) ys -= 1;
  ze += zs;
  Ze += Zs;
  if (zs != Zs) zs -= 1;

  mxlocal = xe - xs - 1;
  mylocal = ye - ys - 1;
  mzlocal = ze - zs - 1;

  PetscCall(DMGetCoordinatesLocal(dmregular, &coor));
  PetscCall(VecGetArrayRead(coor, &_coor));
  c0 = (xs - Xs) + (ys - Ys) * (Xe - Xs) + (zs - Zs) * (Xe - Xs) * (Ye - Ys);
  c1 = (xe - 2 - Xs + 1) + (ye - 2 - Ys + 1) * (Xe - Xs) + (ze - 2 - Zs + 1) * (Xe - Xs) * (Ye - Ys);

  gmin_l[0] = PetscRealPart(_coor[3 * c0 + 0]);
  gmin_l[1] = PetscRealPart(_coor[3 * c0 + 1]);
  gmin_l[2] = PetscRealPart(_coor[3 * c0 + 2]);

  gmax_l[0] = PetscRealPart(_coor[3 * c1 + 0]);
  gmax_l[1] = PetscRealPart(_coor[3 * c1 + 1]);
  gmax_l[2] = PetscRealPart(_coor[3 * c1 + 2]);

  dx[0] = (gmax_l[0] - gmin_l[0]) / ((PetscReal)mxlocal);
  dx[1] = (gmax_l[1] - gmin_l[1]) / ((PetscReal)mylocal);
  dx[2] = (gmax_l[2] - gmin_l[2]) / ((PetscReal)mzlocal);

  PetscCall(VecRestoreArrayRead(coor, &_coor));

  PetscCall(DMGetBoundingBox(dmregular, gmin, gmax));

  PetscCall(VecGetLocalSize(pos, &n));
  PetscCall(VecGetBlockSize(pos, &bs));
  npoints = n / bs;

  PetscCall(PetscMalloc1(npoints, &cellidx));
  PetscCall(VecGetArrayRead(pos, &_coor));
  for (p = 0; p < npoints; p++) {
    PetscReal coor_p[3];
    PetscInt  mi[3];

    coor_p[0] = PetscRealPart(_coor[3 * p]);
    coor_p[1] = PetscRealPart(_coor[3 * p + 1]);
    coor_p[2] = PetscRealPart(_coor[3 * p + 2]);

    cellidx[p] = DMLOCATEPOINT_POINT_NOT_FOUND;

    if (coor_p[0] < gmin_l[0]) { continue; }
    if (coor_p[0] > gmax_l[0]) { continue; }
    if (coor_p[1] < gmin_l[1]) { continue; }
    if (coor_p[1] > gmax_l[1]) { continue; }
    if (coor_p[2] < gmin_l[2]) { continue; }
    if (coor_p[2] > gmax_l[2]) { continue; }

    for (d = 0; d < 3; d++) { mi[d] = (PetscInt)((coor_p[d] - gmin[d]) / dx[d]); }

    if (mi[0] < xs) { continue; }
    if (mi[0] > (xe - 1)) { continue; }
    if (mi[1] < ys) { continue; }
    if (mi[1] > (ye - 1)) { continue; }
    if (mi[2] < zs) { continue; }
    if (mi[2] > (ze - 1)) { continue; }

    if (mi[0] == (xe - 1)) { mi[0]--; }
    if (mi[1] == (ye - 1)) { mi[1]--; }
    if (mi[2] == (ze - 1)) { mi[2]--; }

    cellidx[p] = (mi[0] - xs) + (mi[1] - ys) * mxlocal + (mi[2] - zs) * mxlocal * mylocal;
  }
  PetscCall(VecRestoreArrayRead(pos, &_coor));
  PetscCall(ISCreateGeneral(PETSC_COMM_SELF, npoints, cellidx, PETSC_OWN_POINTER, iscell));
  PetscFunctionReturn(0);
}

PetscErrorCode DMLocatePoints_DA_Regular(DM dm, Vec pos, DMPointLocationType ltype, PetscSF cellSF) {
  IS              iscell;
  PetscSFNode    *cells;
  PetscInt        p, bs, dim, npoints, nfound;
  const PetscInt *boxCells;

  PetscFunctionBegin;
  PetscCall(VecGetBlockSize(pos, &dim));
  switch (dim) {
  case 1: SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "Support not provided for 1D");
  case 2: PetscCall(private_DMDALocatePointsIS_2D_Regular(dm, pos, &iscell)); break;
  case 3: PetscCall(private_DMDALocatePointsIS_3D_Regular(dm, pos, &iscell)); break;
  default: SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "Unsupport spatial dimension");
  }

  PetscCall(VecGetLocalSize(pos, &npoints));
  PetscCall(VecGetBlockSize(pos, &bs));
  npoints = npoints / bs;

  PetscCall(PetscMalloc1(npoints, &cells));
  PetscCall(ISGetIndices(iscell, &boxCells));

  for (p = 0; p < npoints; p++) {
    cells[p].rank  = 0;
    cells[p].index = boxCells[p];
  }
  PetscCall(ISRestoreIndices(iscell, &boxCells));

  nfound = npoints;
  PetscCall(PetscSFSetGraph(cellSF, npoints, nfound, NULL, PETSC_OWN_POINTER, cells, PETSC_OWN_POINTER));
  PetscCall(ISDestroy(&iscell));
  PetscFunctionReturn(0);
}