xref: /petsc/src/dm/impls/da/dagetelem.c (revision d4a6ed37bb921680ea807becddc286b1b63c7c6c)

#include <petsc/private/dmdaimpl.h>     /*I  "petscdmda.h"   I*/

static PetscErrorCode DMDAGetElements_1D(DM dm,PetscInt *nel,PetscInt *nen,const PetscInt *e[])
{
  PetscErrorCode ierr;
  DM_DA          *da = (DM_DA*)dm->data;
  PetscInt       i,xs,xe,Xs,Xe;
  PetscInt       cnt=0;

  PetscFunctionBegin;
  if (!da->e) {
    PetscInt corners[2];

    if (!da->s) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Cannot get elements for DMDA with zero stencil width");
    ierr   = DMDAGetCorners(dm,&xs,0,0,&xe,0,0);CHKERRQ(ierr);
    ierr   = DMDAGetGhostCorners(dm,&Xs,0,0,&Xe,0,0);CHKERRQ(ierr);
    xe    += xs; Xe += Xs; if (xs != Xs) xs -= 1;
    da->ne = 1*(xe - xs - 1);
    ierr   = PetscMalloc1(1 + 2*da->ne,&da->e);CHKERRQ(ierr);
    for (i=xs; i<xe-1; i++) {
      da->e[cnt++] = (i-Xs);
      da->e[cnt++] = (i-Xs+1);
    }
    corners[0] = (xs  -Xs);
    corners[1] = (xe-1-Xs);
    ierr = ISCreateGeneral(PETSC_COMM_SELF,2,corners,PETSC_COPY_VALUES,&da->ecorners);CHKERRQ(ierr);
  }
  *nel = da->ne;
  *nen = 2;
  *e   = da->e;
  PetscFunctionReturn(0);
}

static PetscErrorCode DMDAGetElements_2D(DM dm,PetscInt *nel,PetscInt *nen,const PetscInt *e[])
{
  PetscErrorCode ierr;
  DM_DA          *da = (DM_DA*)dm->data;
  PetscInt       i,xs,xe,Xs,Xe;
  PetscInt       j,ys,ye,Ys,Ye;
  PetscInt       cnt=0, cell[4], ns=2, nn=3;
  PetscInt       c, split[] = {0,1,3,
                               2,3,1};

  PetscFunctionBegin;
  if (da->elementtype == DMDA_ELEMENT_P1) {nn=3;}
  if (da->elementtype == DMDA_ELEMENT_Q1) {nn=4;}
  if (!da->e) {
    PetscInt corners[4];

    if (!da->s) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Cannot get elements for DMDA with zero stencil width");
    if (da->elementtype == DMDA_ELEMENT_P1) {ns=2;}
    if (da->elementtype == DMDA_ELEMENT_Q1) {ns=1;}
    ierr   = DMDAGetCorners(dm,&xs,&ys,0,&xe,&ye,0);CHKERRQ(ierr);
    ierr   = DMDAGetGhostCorners(dm,&Xs,&Ys,0,&Xe,&Ye,0);CHKERRQ(ierr);
    xe    += xs; Xe += Xs; if (xs != Xs) xs -= 1;
    ye    += ys; Ye += Ys; if (ys != Ys) ys -= 1;
    da->ne = ns*(xe - xs - 1)*(ye - ys - 1);
    ierr   = PetscMalloc1(1 + nn*da->ne,&da->e);CHKERRQ(ierr);
    for (j=ys; j<ye-1; j++) {
      for (i=xs; i<xe-1; i++) {
        cell[0] = (i-Xs  ) + (j-Ys  )*(Xe-Xs);
        cell[1] = (i-Xs+1) + (j-Ys  )*(Xe-Xs);
        cell[2] = (i-Xs+1) + (j-Ys+1)*(Xe-Xs);
        cell[3] = (i-Xs  ) + (j-Ys+1)*(Xe-Xs);
        if (da->elementtype == DMDA_ELEMENT_P1) {
          for (c=0; c<ns*nn; c++) da->e[cnt++] = cell[split[c]];
        }
        if (da->elementtype == DMDA_ELEMENT_Q1) {
          for (c=0; c<ns*nn; c++) da->e[cnt++] = cell[c];
        }
      }
    }
    corners[0] = (xs  -Xs) + (ys  -Ys)*(Xe-Xs);
    corners[1] = (xe-1-Xs) + (ys  -Ys)*(Xe-Xs);
    corners[2] = (xs  -Xs) + (ye-1-Ys)*(Xe-Xs);
    corners[3] = (xe-1-Xs) + (ye-1-Ys)*(Xe-Xs);
    ierr = ISCreateGeneral(PETSC_COMM_SELF,4,corners,PETSC_COPY_VALUES,&da->ecorners);CHKERRQ(ierr);
  }
  *nel = da->ne;
  *nen = nn;
  *e   = da->e;
  PetscFunctionReturn(0);
}

static PetscErrorCode DMDAGetElements_3D(DM dm,PetscInt *nel,PetscInt *nen,const PetscInt *e[])
{
  PetscErrorCode ierr;
  DM_DA          *da = (DM_DA*)dm->data;
  PetscInt       i,xs,xe,Xs,Xe;
  PetscInt       j,ys,ye,Ys,Ye;
  PetscInt       k,zs,ze,Zs,Ze;
  PetscInt       cnt=0, cell[8], ns=6, nn=4;
  PetscInt       c, split[] = {0,1,3,7,
                               0,1,7,4,
                               1,2,3,7,
                               1,2,7,6,
                               1,4,5,7,
                               1,5,6,7};

  PetscFunctionBegin;
  if (da->elementtype == DMDA_ELEMENT_P1) {nn=4;}
  if (da->elementtype == DMDA_ELEMENT_Q1) {nn=8;}
  if (!da->e) {
    PetscInt corners[8];

    if (!da->s) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Cannot get elements for DMDA with zero stencil width");
    if (da->elementtype == DMDA_ELEMENT_P1) {ns=6;}
    if (da->elementtype == DMDA_ELEMENT_Q1) {ns=1;}
    ierr   = DMDAGetCorners(dm,&xs,&ys,&zs,&xe,&ye,&ze);CHKERRQ(ierr);
    ierr   = DMDAGetGhostCorners(dm,&Xs,&Ys,&Zs,&Xe,&Ye,&Ze);CHKERRQ(ierr);
    xe    += xs; Xe += Xs; if (xs != Xs) xs -= 1;
    ye    += ys; Ye += Ys; if (ys != Ys) ys -= 1;
    ze    += zs; Ze += Zs; if (zs != Zs) zs -= 1;
    da->ne = ns*(xe - xs - 1)*(ye - ys - 1)*(ze - zs - 1);
    ierr   = PetscMalloc1(1 + nn*da->ne,&da->e);CHKERRQ(ierr);
    for (k=zs; k<ze-1; k++) {
      for (j=ys; j<ye-1; j++) {
        for (i=xs; i<xe-1; i++) {
          cell[0] = (i-Xs  ) + (j-Ys  )*(Xe-Xs) + (k-Zs  )*(Xe-Xs)*(Ye-Ys);
          cell[1] = (i-Xs+1) + (j-Ys  )*(Xe-Xs) + (k-Zs  )*(Xe-Xs)*(Ye-Ys);
          cell[2] = (i-Xs+1) + (j-Ys+1)*(Xe-Xs) + (k-Zs  )*(Xe-Xs)*(Ye-Ys);
          cell[3] = (i-Xs  ) + (j-Ys+1)*(Xe-Xs) + (k-Zs  )*(Xe-Xs)*(Ye-Ys);
          cell[4] = (i-Xs  ) + (j-Ys  )*(Xe-Xs) + (k-Zs+1)*(Xe-Xs)*(Ye-Ys);
          cell[5] = (i-Xs+1) + (j-Ys  )*(Xe-Xs) + (k-Zs+1)*(Xe-Xs)*(Ye-Ys);
          cell[6] = (i-Xs+1) + (j-Ys+1)*(Xe-Xs) + (k-Zs+1)*(Xe-Xs)*(Ye-Ys);
          cell[7] = (i-Xs  ) + (j-Ys+1)*(Xe-Xs) + (k-Zs+1)*(Xe-Xs)*(Ye-Ys);
          if (da->elementtype == DMDA_ELEMENT_P1) {
            for (c=0; c<ns*nn; c++) da->e[cnt++] = cell[split[c]];
          }
          if (da->elementtype == DMDA_ELEMENT_Q1) {
            for (c=0; c<ns*nn; c++) da->e[cnt++] = cell[c];
          }
        }
      }
    }
    corners[0] = (xs  -Xs) + (ys  -Ys)*(Xe-Xs) + (zs-Zs  )*(Xe-Xs)*(Ye-Ys);
    corners[1] = (xe-1-Xs) + (ys  -Ys)*(Xe-Xs) + (zs-Zs  )*(Xe-Xs)*(Ye-Ys);
    corners[2] = (xs  -Xs) + (ye-1-Ys)*(Xe-Xs) + (zs-Zs  )*(Xe-Xs)*(Ye-Ys);
    corners[3] = (xe-1-Xs) + (ye-1-Ys)*(Xe-Xs) + (zs-Zs  )*(Xe-Xs)*(Ye-Ys);
    corners[4] = (xs  -Xs) + (ys  -Ys)*(Xe-Xs) + (ze-1-Zs)*(Xe-Xs)*(Ye-Ys);
    corners[5] = (xe-1-Xs) + (ys  -Ys)*(Xe-Xs) + (ze-1-Zs)*(Xe-Xs)*(Ye-Ys);
    corners[6] = (xs  -Xs) + (ye-1-Ys)*(Xe-Xs) + (ze-1-Zs)*(Xe-Xs)*(Ye-Ys);
    corners[7] = (xe-1-Xs) + (ye-1-Ys)*(Xe-Xs) + (ze-1-Zs)*(Xe-Xs)*(Ye-Ys);
    ierr = ISCreateGeneral(PETSC_COMM_SELF,8,corners,PETSC_COPY_VALUES,&da->ecorners);CHKERRQ(ierr);
  }
  *nel = da->ne;
  *nen = nn;
  *e   = da->e;
  PetscFunctionReturn(0);
}

/*@
   DMDAGetElementsCorners - Returns the global (x,y,z) indices of the lower left
   corner of the non-overlapping decomposition identified by DMDAGetElements()

    Not Collective

   Input Parameter:
.     da - the DM object

   Output Parameters:
+     gx - the x index
.     gy - the y index
-     gz - the z index

   Level: intermediate

   Notes:

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetElements()
@*/
PetscErrorCode  DMDAGetElementsCorners(DM da, PetscInt *gx, PetscInt *gy, PetscInt *gz)
{
  PetscInt       xs,Xs;
  PetscInt       ys,Ys;
  PetscInt       zs,Zs;
  PetscBool      isda;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(da,DM_CLASSID,1);
  if (gx) PetscValidIntPointer(gx,2);
  if (gy) PetscValidIntPointer(gy,3);
  if (gz) PetscValidIntPointer(gz,4);
  ierr = PetscObjectTypeCompare((PetscObject)da,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) SETERRQ1(PetscObjectComm((PetscObject)da),PETSC_ERR_USER,"Not for DM type %s",((PetscObject)da)->type_name);
  ierr = DMDAGetCorners(da,&xs,&ys,&zs,NULL,NULL,NULL);CHKERRQ(ierr);
  ierr = DMDAGetGhostCorners(da,&Xs,&Ys,&Zs,NULL,NULL,NULL);CHKERRQ(ierr);
  if (xs != Xs) xs -= 1;
  if (ys != Ys) ys -= 1;
  if (zs != Zs) zs -= 1;
  if (gx) *gx  = xs;
  if (gy) *gy  = ys;
  if (gz) *gz  = zs;
  PetscFunctionReturn(0);
}

/*@
      DMDAGetElementsSizes - Gets the local number of elements per direction for the non-overlapping decomposition identified by DMDAGetElements()

    Not Collective

   Input Parameter:
.     da - the DM object

   Output Parameters:
+     mx - number of local elements in x-direction
.     my - number of local elements in y-direction
-     mz - number of local elements in z-direction

   Level: intermediate

   Notes: It returns the same number of elements, irrespective of the DMDAElementType

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetElements
@*/
PetscErrorCode  DMDAGetElementsSizes(DM da, PetscInt *mx, PetscInt *my, PetscInt *mz)
{
  PetscInt       xs,xe,Xs;
  PetscInt       ys,ye,Ys;
  PetscInt       zs,ze,Zs;
  PetscInt       dim;
  PetscBool      isda;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(da,DM_CLASSID,1);
  if (mx) PetscValidIntPointer(mx,2);
  if (my) PetscValidIntPointer(my,3);
  if (mz) PetscValidIntPointer(mz,4);
  ierr = PetscObjectTypeCompare((PetscObject)da,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) SETERRQ1(PetscObjectComm((PetscObject)da),PETSC_ERR_USER,"Not for DM type %s",((PetscObject)da)->type_name);
  ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xe,&ye,&ze);CHKERRQ(ierr);
  ierr = DMDAGetGhostCorners(da,&Xs,&Ys,&Zs,NULL,NULL,NULL);CHKERRQ(ierr);
  xe  += xs; if (xs != Xs) xs -= 1;
  ye  += ys; if (ys != Ys) ys -= 1;
  ze  += zs; if (zs != Zs) zs -= 1;
  if (mx) *mx  = 0;
  if (my) *my  = 0;
  if (mz) *mz  = 0;
  ierr = DMGetDimension(da,&dim);CHKERRQ(ierr);
  switch (dim) {
  case 3:
    if (mz) *mz = ze - zs - 1;
  case 2:
    if (my) *my = ye - ys - 1;
  case 1:
    if (mx) *mx = xe - xs - 1;
    break;
  }
  PetscFunctionReturn(0);
}

/*@
      DMDASetElementType - Sets the element type to be returned by DMDAGetElements()

    Not Collective

   Input Parameter:
.     da - the DMDA object

   Output Parameters:
.     etype - the element type, currently either DMDA_ELEMENT_P1 or DMDA_ELEMENT_Q1

   Level: intermediate

.seealso: DMDAElementType, DMDAGetElementType(), DMDAGetElements(), DMDARestoreElements()
@*/
PetscErrorCode  DMDASetElementType(DM da, DMDAElementType etype)
{
  DM_DA          *dd = (DM_DA*)da->data;
  PetscErrorCode ierr;
  PetscBool      isda;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(da,DM_CLASSID,1);
  PetscValidLogicalCollectiveEnum(da,etype,2);
  ierr = PetscObjectTypeCompare((PetscObject)da,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) PetscFunctionReturn(0);
  if (dd->elementtype != etype) {
    ierr = PetscFree(dd->e);CHKERRQ(ierr);
    ierr = ISDestroy(&dd->ecorners);CHKERRQ(ierr);

    dd->elementtype = etype;
    dd->ne          = 0;
    dd->e           = NULL;
  }
  PetscFunctionReturn(0);
}

/*@
      DMDAGetElementType - Gets the element type to be returned by DMDAGetElements()

    Not Collective

   Input Parameter:
.     da - the DMDA object

   Output Parameters:
.     etype - the element type, currently either DMDA_ELEMENT_P1 or DMDA_ELEMENT_Q1

   Level: intermediate

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetElements(), DMDARestoreElements()
@*/
PetscErrorCode  DMDAGetElementType(DM da, DMDAElementType *etype)
{
  DM_DA          *dd = (DM_DA*)da->data;
  PetscErrorCode ierr;
  PetscBool      isda;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(da,DM_CLASSID,1);
  PetscValidPointer(etype,2);
  ierr = PetscObjectTypeCompare((PetscObject)da,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) SETERRQ1(PetscObjectComm((PetscObject)da),PETSC_ERR_USER,"Not for DM type %s",((PetscObject)da)->type_name);
  *etype = dd->elementtype;
  PetscFunctionReturn(0);
}

/*@C
      DMDAGetElements - Gets an array containing the indices (in local coordinates)
                 of all the local elements

    Not Collective

   Input Parameter:
.     dm - the DM object

   Output Parameters:
+     nel - number of local elements
.     nen - number of element nodes
-     e - the local indices of the elements' vertices

   Level: intermediate

   Notes:
     Call DMDARestoreElements() once you have finished accessing the elements.

     Each process uniquely owns a subset of the elements. That is no element is owned by two or more processes.

     If on each process you integrate over its owned elements and use ADD_VALUES in Vec/MatSetValuesLocal() then you'll obtain the correct result.

     Not supported in Fortran

.seealso: DMDAElementType, DMDASetElementType(), VecSetValuesLocal(), MatSetValuesLocal(), DMGlobalToLocalBegin(), DMLocalToGlobalBegin()
@*/
PetscErrorCode  DMDAGetElements(DM dm,PetscInt *nel,PetscInt *nen,const PetscInt *e[])
{
  PetscInt       dim;
  PetscErrorCode ierr;
  DM_DA          *dd = (DM_DA*)dm->data;
  PetscBool      isda;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(dm,DM_CLASSID,1);
  PetscValidIntPointer(nel,2);
  PetscValidIntPointer(nen,3);
  PetscValidPointer(e,4);
  ierr = PetscObjectTypeCompare((PetscObject)dm,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) SETERRQ1(PetscObjectComm((PetscObject)dm),PETSC_ERR_USER,"Not for DM type %s",((PetscObject)dm)->type_name);
  if (dd->stencil_type == DMDA_STENCIL_STAR) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"DMDAGetElements() requires you use a stencil type of DMDA_STENCIL_BOX");
  ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr);
  if (dim==-1) {
    *nel = 0; *nen = 0; *e = NULL;
  } else if (dim==1) {
    ierr = DMDAGetElements_1D(dm,nel,nen,e);CHKERRQ(ierr);
  } else if (dim==2) {
    ierr = DMDAGetElements_2D(dm,nel,nen,e);CHKERRQ(ierr);
  } else if (dim==3) {
    ierr = DMDAGetElements_3D(dm,nel,nen,e);CHKERRQ(ierr);
  } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_CORRUPT,"DMDA dimension not 1, 2, or 3, it is %D\n",dim);
  PetscFunctionReturn(0);
}

/*@
      DMDAGetSubdomainCornersIS - Gets an index set containing the corner indices (in local coordinates)
                                 of the non-overlapping decomposition identified by DMDAGetElements

    Not Collective

   Input Parameter:
.     dm - the DM object

   Output Parameters:
.     is - the index set

   Level: intermediate

   Notes: Call DMDARestoreSubdomainCornersIS() once you have finished accessing the index set.

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetElements(), DMDARestoreElementsCornersIS()
@*/
PetscErrorCode  DMDAGetSubdomainCornersIS(DM dm,IS *is)
{
  PetscErrorCode ierr;
  DM_DA          *dd = (DM_DA*)dm->data;
  PetscBool      isda;

  PetscFunctionBegin;
  PetscValidHeaderSpecific(dm,DM_CLASSID,1);
  PetscValidPointer(is,2);
  ierr = PetscObjectTypeCompare((PetscObject)dm,DMDA,&isda);CHKERRQ(ierr);
  if (!isda) SETERRQ1(PetscObjectComm((PetscObject)dm),PETSC_ERR_USER,"Not for DM type %s",((PetscObject)dm)->type_name);
  if (dd->stencil_type == DMDA_STENCIL_STAR) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"DMDAGetElement() requires you use a stencil type of DMDA_STENCIL_BOX");
  if (!dd->ecorners) { /* compute elements if not yet done */
    const PetscInt *e;
    PetscInt       nel,nen;

    ierr = DMDAGetElements(dm,&nel,&nen,&e);CHKERRQ(ierr);
    ierr = DMDARestoreElements(dm,&nel,&nen,&e);CHKERRQ(ierr);
  }
  *is = dd->ecorners;
  PetscFunctionReturn(0);
}

/*@C
      DMDARestoreElements - Restores the array obtained with DMDAGetElements()

    Not Collective

   Input Parameter:
+     dm - the DM object
.     nel - number of local elements
.     nen - number of element nodes
-     e - the local indices of the elements' vertices

   Level: intermediate

   Note: You should not access these values after you have called this routine.

         This restore signals the DMDA object that you no longer need access to the array information.

         Not supported in Fortran

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetElements()
@*/
PetscErrorCode  DMDARestoreElements(DM dm,PetscInt *nel,PetscInt *nen,const PetscInt *e[])
{
  PetscFunctionBegin;
  PetscValidHeaderSpecific(dm,DM_CLASSID,1);
  PetscValidIntPointer(nel,2);
  PetscValidIntPointer(nen,3);
  PetscValidPointer(e,4);
  *nel = 0;
  *nen = -1;
  *e = NULL;
  PetscFunctionReturn(0);
}

/*@
      DMDARestoreSubdomainCornersIS - Restores the IS obtained with DMDAGetSubdomainCornersIS()

    Not Collective

   Input Parameter:
+     dm - the DM object
-     is - the index set

   Level: intermediate

   Note:

.seealso: DMDAElementType, DMDASetElementType(), DMDAGetSubdomainCornersIS()
@*/
PetscErrorCode  DMDARestoreSubdomainCornersIS(DM dm,IS *is)
{
  PetscFunctionBegin;
  PetscValidHeaderSpecific(dm,DM_CLASSID,1);
  PetscValidHeaderSpecific(*is,IS_CLASSID,2);
  *is = NULL;
  PetscFunctionReturn(0);
}