xref: /petsc/src/dm/impls/moab/dmmbvec.cxx (revision 08401ef684002a709c6d3db98a0c9f54a8bcf1ec)
1af0996ceSBarry Smith #include <petsc/private/dmmbimpl.h> /*I  "petscdmmoab.h"   I*/
2af0996ceSBarry Smith #include <petsc/private/vecimpl.h>
3032b8ab6SVijay Mahadevan 
4032b8ab6SVijay Mahadevan #include <petscdmmoab.h>
5032b8ab6SVijay Mahadevan #include <MBTagConventions.hpp>
6032b8ab6SVijay Mahadevan 
79c368985SVijay Mahadevan #define USE_NATIVE_PETSCVEC
89c368985SVijay Mahadevan 
9f6829af0SVijay Mahadevan /* declare some private DMMoab specific overrides */
10f6829af0SVijay Mahadevan static PetscErrorCode DMCreateVector_Moab_Private(DM dm,moab::Tag tag,const moab::Range* userrange,PetscBool is_global_vec,PetscBool destroy_tag,Vec *vec);
11f6829af0SVijay Mahadevan static PetscErrorCode DMVecUserDestroy_Moab(void *user);
12f6829af0SVijay Mahadevan static PetscErrorCode DMVecDuplicate_Moab(Vec x,Vec *y);
139daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
149daf19fdSVijay Mahadevan static PetscErrorCode DMVecCreateTagName_Moab_Private(moab::Interface *mbiface,moab::ParallelComm *pcomm,char** tag_name);
159daf19fdSVijay Mahadevan #else
169daf19fdSVijay Mahadevan static PetscErrorCode DMVecCreateTagName_Moab_Private(moab::Interface *mbiface,char** tag_name);
179daf19fdSVijay Mahadevan #endif
18032b8ab6SVijay Mahadevan 
19b8ecf6d3SVijay Mahadevan /*@C
20f6829af0SVijay Mahadevan   DMMoabCreateVector - Create a Vec from either an existing tag, or a specified tag size, and a range of entities
21f6829af0SVijay Mahadevan 
22d083f849SBarry Smith   Collective
23f6829af0SVijay Mahadevan 
24d8d19677SJose E. Roman   Input Parameters:
25b8ecf6d3SVijay Mahadevan + dm              - The DMMoab object being set
26f6829af0SVijay Mahadevan . tag             - If non-zero, block size will be taken from the tag size
27f6829af0SVijay Mahadevan . range           - If non-empty, Vec corresponds to these entities, otherwise to the entities set on the DMMoab
28f6829af0SVijay Mahadevan . is_global_vec   - If true, this is a local representation of the Vec (including ghosts in parallel), otherwise a truly parallel one
29a2b725a8SWilliam Gropp - destroy_tag     - If true, MOAB tag is destroyed with Vec, otherwise it is left on MOAB
30f6829af0SVijay Mahadevan 
31f6829af0SVijay Mahadevan   Output Parameter:
32f6829af0SVijay Mahadevan . vec             - The created vector
33f6829af0SVijay Mahadevan 
34f6829af0SVijay Mahadevan   Level: beginner
35f6829af0SVijay Mahadevan 
36b8ecf6d3SVijay Mahadevan .seealso: VecCreate()
37f6829af0SVijay Mahadevan @*/
38f6829af0SVijay Mahadevan PetscErrorCode DMMoabCreateVector(DM dm, moab::Tag tag, const moab::Range* range, PetscBool is_global_vec, PetscBool destroy_tag, Vec *vec)
39f6829af0SVijay Mahadevan {
40f6829af0SVijay Mahadevan   PetscFunctionBegin;
417a8be351SBarry Smith   PetscCheck(tag || (range && !range->empty()),PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Both tag and range cannot be null.");
42f6829af0SVijay Mahadevan 
439566063dSJacob Faibussowitsch   PetscCall(DMCreateVector_Moab_Private(dm, tag, range, is_global_vec, destroy_tag, vec));
44f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
45f6829af0SVijay Mahadevan }
46f6829af0SVijay Mahadevan 
47b8ecf6d3SVijay Mahadevan /*@C
48f6829af0SVijay Mahadevan   DMMoabGetVecTag - Get the MOAB tag associated with this Vec
49f6829af0SVijay Mahadevan 
50f6829af0SVijay Mahadevan   Input Parameter:
51f6829af0SVijay Mahadevan . vec - Vec being queried
52f6829af0SVijay Mahadevan 
53f6829af0SVijay Mahadevan   Output Parameter:
54f6829af0SVijay Mahadevan . tag - Tag associated with this Vec. NULL if vec is a native PETSc Vec.
55f6829af0SVijay Mahadevan 
56f6829af0SVijay Mahadevan   Level: beginner
57f6829af0SVijay Mahadevan 
58b8ecf6d3SVijay Mahadevan .seealso: DMMoabCreateVector(), DMMoabGetVecRange()
59f6829af0SVijay Mahadevan @*/
60f6829af0SVijay Mahadevan PetscErrorCode DMMoabGetVecTag(Vec vec, moab::Tag *tag)
61f6829af0SVijay Mahadevan {
62f6829af0SVijay Mahadevan   PetscContainer  moabdata;
63f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab;
64f6829af0SVijay Mahadevan 
65f6829af0SVijay Mahadevan   PetscFunctionBegin;
66f6829af0SVijay Mahadevan   PetscValidPointer(tag, 2);
67f6829af0SVijay Mahadevan 
68f6829af0SVijay Mahadevan   /* Get the MOAB private data */
699566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
709566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**) &vmoab));
71f6829af0SVijay Mahadevan 
72f6829af0SVijay Mahadevan   *tag = vmoab->tag;
73f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
74f6829af0SVijay Mahadevan }
75f6829af0SVijay Mahadevan 
76b8ecf6d3SVijay Mahadevan /*@C
77f6829af0SVijay Mahadevan   DMMoabGetVecRange - Get the MOAB entities associated with this Vec
78f6829af0SVijay Mahadevan 
79f6829af0SVijay Mahadevan   Input Parameter:
80f6829af0SVijay Mahadevan . vec   - Vec being queried
81f6829af0SVijay Mahadevan 
82f6829af0SVijay Mahadevan   Output Parameter:
83f6829af0SVijay Mahadevan . range - Entities associated with this Vec. NULL if vec is a native PETSc Vec.
84f6829af0SVijay Mahadevan 
85f6829af0SVijay Mahadevan   Level: beginner
86f6829af0SVijay Mahadevan 
87b8ecf6d3SVijay Mahadevan .seealso: DMMoabCreateVector(), DMMoabGetVecTag()
88f6829af0SVijay Mahadevan @*/
89f6829af0SVijay Mahadevan PetscErrorCode DMMoabGetVecRange(Vec vec, moab::Range *range)
90f6829af0SVijay Mahadevan {
91f6829af0SVijay Mahadevan   PetscContainer  moabdata;
92f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab;
93f6829af0SVijay Mahadevan 
94f6829af0SVijay Mahadevan   PetscFunctionBegin;
95f6829af0SVijay Mahadevan   PetscValidPointer(range, 2);
96f6829af0SVijay Mahadevan 
97f6829af0SVijay Mahadevan   /* Get the MOAB private data handle */
989566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
999566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**) &vmoab));
100f6829af0SVijay Mahadevan 
101f6829af0SVijay Mahadevan   *range = *vmoab->tag_range;
102f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
103f6829af0SVijay Mahadevan }
104f6829af0SVijay Mahadevan 
105b8ecf6d3SVijay Mahadevan /*@C
106f6829af0SVijay Mahadevan   DMMoabVecGetArray - Returns the writable direct access array to the local representation of MOAB tag data for the underlying vector using locally owned+ghosted range of entities
107f6829af0SVijay Mahadevan 
108d083f849SBarry Smith   Collective
109f6829af0SVijay Mahadevan 
110d8d19677SJose E. Roman   Input Parameters:
111a2b725a8SWilliam Gropp + dm              - The DMMoab object being set
112a2b725a8SWilliam Gropp - vec             - The Vector whose underlying data is requested
113f6829af0SVijay Mahadevan 
114f6829af0SVijay Mahadevan   Output Parameter:
115f6829af0SVijay Mahadevan . array           - The local data array
116f6829af0SVijay Mahadevan 
117f6829af0SVijay Mahadevan   Level: intermediate
118f6829af0SVijay Mahadevan 
119f6829af0SVijay Mahadevan .seealso: DMMoabVecRestoreArray(), DMMoabVecGetArrayRead(), DMMoabVecRestoreArrayRead()
120f6829af0SVijay Mahadevan @*/
121f6829af0SVijay Mahadevan PetscErrorCode  DMMoabVecGetArray(DM dm, Vec vec, void* array)
122f6829af0SVijay Mahadevan {
123f6829af0SVijay Mahadevan   DM_Moab        *dmmoab;
124f6829af0SVijay Mahadevan   moab::ErrorCode merr;
125f6829af0SVijay Mahadevan   PetscInt        count, i, f;
126f6829af0SVijay Mahadevan   moab::Tag       vtag;
127f6829af0SVijay Mahadevan   PetscScalar     **varray;
128f6829af0SVijay Mahadevan   PetscScalar     *marray;
129f6829af0SVijay Mahadevan   PetscContainer  moabdata;
130f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab, *xmoab;
131f6829af0SVijay Mahadevan 
132f6829af0SVijay Mahadevan   PetscFunctionBegin;
133f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
134f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(vec, VEC_CLASSID, 2);
135f6829af0SVijay Mahadevan   PetscValidPointer(array, 3);
136f6829af0SVijay Mahadevan   dmmoab = (DM_Moab*)dm->data;
137f6829af0SVijay Mahadevan 
138f6829af0SVijay Mahadevan   /* Get the Vec_MOAB struct for the original vector */
1399566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
1409566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**)&vmoab));
141f6829af0SVijay Mahadevan 
142f6829af0SVijay Mahadevan   /* Get the real scalar array handle */
143f6829af0SVijay Mahadevan   varray = reinterpret_cast<PetscScalar**>(array);
144f6829af0SVijay Mahadevan 
145f6829af0SVijay Mahadevan   if (vmoab->is_native_vec) {
146f6829af0SVijay Mahadevan 
147f6829af0SVijay Mahadevan     /* get the local representation of the arrays from Vectors */
1489566063dSJacob Faibussowitsch     PetscCall(DMGetLocalVector(dm, &vmoab->local));
1499566063dSJacob Faibussowitsch     PetscCall(DMGlobalToLocalBegin(dm, vec, INSERT_VALUES, vmoab->local));
1509566063dSJacob Faibussowitsch     PetscCall(DMGlobalToLocalEnd(dm, vec, INSERT_VALUES, vmoab->local));
151f6829af0SVijay Mahadevan 
152f6829af0SVijay Mahadevan     /* Get the Vec_MOAB struct for the original vector */
1539566063dSJacob Faibussowitsch     PetscCall(PetscObjectQuery((PetscObject)vmoab->local, "MOABData", (PetscObject*) &moabdata));
1549566063dSJacob Faibussowitsch     PetscCall(PetscContainerGetPointer(moabdata, (void**)&xmoab));
155f6829af0SVijay Mahadevan 
156f6829af0SVijay Mahadevan     /* get the local representation of the arrays from Vectors */
1579566063dSJacob Faibussowitsch     PetscCall(VecGhostGetLocalForm(vmoab->local, &xmoab->local));
1589566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateBegin(vmoab->local, INSERT_VALUES, SCATTER_FORWARD));
1599566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateEnd(vmoab->local, INSERT_VALUES, SCATTER_FORWARD));
160f6829af0SVijay Mahadevan 
1619566063dSJacob Faibussowitsch     PetscCall(VecGetArray(xmoab->local, varray));
162f6829af0SVijay Mahadevan   }
163f6829af0SVijay Mahadevan   else {
164f6829af0SVijay Mahadevan 
165f6829af0SVijay Mahadevan     /* Get the MOAB private data */
1669566063dSJacob Faibussowitsch     PetscCall(DMMoabGetVecTag(vec, &vtag));
167f6829af0SVijay Mahadevan 
1689daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
169f6829af0SVijay Mahadevan     /* exchange the data into ghost cells first */
170f6829af0SVijay Mahadevan     merr = dmmoab->pcomm->exchange_tags(vtag, *dmmoab->vlocal); MBERRNM(merr);
1719daf19fdSVijay Mahadevan #endif
172f6829af0SVijay Mahadevan 
1739566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1((dmmoab->nloc + dmmoab->nghost) * dmmoab->numFields, varray));
174f6829af0SVijay Mahadevan 
175f6829af0SVijay Mahadevan     /* Get the array data for local entities */
176f6829af0SVijay Mahadevan     merr = dmmoab->mbiface->tag_iterate(vtag, dmmoab->vlocal->begin(), dmmoab->vlocal->end(), count, reinterpret_cast<void*&>(marray), false); MBERRNM(merr);
1772c71b3e2SJacob Faibussowitsch     PetscCheckFalse(count != dmmoab->nloc + dmmoab->nghost,PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mismatch between local vertices and tag partition for Vec. %D != %D.", count, dmmoab->nloc + dmmoab->nghost);
178f6829af0SVijay Mahadevan 
179f6829af0SVijay Mahadevan     i = 0;
180f6829af0SVijay Mahadevan     for (moab::Range::iterator iter = dmmoab->vlocal->begin(); iter != dmmoab->vlocal->end(); iter++) {
181f6829af0SVijay Mahadevan       for (f = 0; f < dmmoab->numFields; f++, i++)
1823f1c6e43SVijay Mahadevan         (*varray)[dmmoab->lidmap[(PetscInt)*iter - dmmoab->seqstart]*dmmoab->numFields + f] = marray[i];
1833f1c6e43SVijay Mahadevan       //(*varray)[dmmoab->llmap[dmmoab->lidmap[((PetscInt)*iter-dmmoab->seqstart)]*dmmoab->numFields+f]]=marray[i];
184f6829af0SVijay Mahadevan     }
185f6829af0SVijay Mahadevan   }
186f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
187f6829af0SVijay Mahadevan }
188f6829af0SVijay Mahadevan 
189b8ecf6d3SVijay Mahadevan /*@C
190f6829af0SVijay Mahadevan   DMMoabVecRestoreArray - Restores the writable direct access array obtained via DMMoabVecGetArray
191f6829af0SVijay Mahadevan 
192d083f849SBarry Smith   Collective
193f6829af0SVijay Mahadevan 
194d8d19677SJose E. Roman   Input Parameters:
195f6829af0SVijay Mahadevan + dm              - The DMMoab object being set
196f6829af0SVijay Mahadevan . vec             - The Vector whose underlying data is requested
197a2b725a8SWilliam Gropp - array           - The local data array
198f6829af0SVijay Mahadevan 
199f6829af0SVijay Mahadevan   Level: intermediate
200f6829af0SVijay Mahadevan 
201f6829af0SVijay Mahadevan .seealso: DMMoabVecGetArray(), DMMoabVecGetArrayRead(), DMMoabVecRestoreArrayRead()
202f6829af0SVijay Mahadevan @*/
203f6829af0SVijay Mahadevan PetscErrorCode  DMMoabVecRestoreArray(DM dm, Vec vec, void* array)
204f6829af0SVijay Mahadevan {
205f6829af0SVijay Mahadevan   DM_Moab        *dmmoab;
206f6829af0SVijay Mahadevan   moab::ErrorCode merr;
207f6829af0SVijay Mahadevan   moab::Tag       vtag;
208f6829af0SVijay Mahadevan   PetscInt        count, i, f;
209f6829af0SVijay Mahadevan   PetscScalar     **varray;
210f6829af0SVijay Mahadevan   PetscScalar     *marray;
211f6829af0SVijay Mahadevan   PetscContainer  moabdata;
212f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab, *xmoab;
213f6829af0SVijay Mahadevan 
214f6829af0SVijay Mahadevan   PetscFunctionBegin;
215f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
216f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(vec, VEC_CLASSID, 2);
217f6829af0SVijay Mahadevan   PetscValidPointer(array, 3);
218f6829af0SVijay Mahadevan   dmmoab = (DM_Moab*)dm->data;
219f6829af0SVijay Mahadevan 
220f6829af0SVijay Mahadevan   /* Get the Vec_MOAB struct for the original vector */
2219566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
2229566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**)&vmoab));
223f6829af0SVijay Mahadevan 
224f6829af0SVijay Mahadevan   /* Get the real scalar array handle */
225f6829af0SVijay Mahadevan   varray = reinterpret_cast<PetscScalar**>(array);
226f6829af0SVijay Mahadevan 
227f6829af0SVijay Mahadevan   if (vmoab->is_native_vec) {
228f6829af0SVijay Mahadevan 
229f6829af0SVijay Mahadevan     /* Get the Vec_MOAB struct for the original vector */
2309566063dSJacob Faibussowitsch     PetscCall(PetscObjectQuery((PetscObject)vmoab->local, "MOABData", (PetscObject*) &moabdata));
2319566063dSJacob Faibussowitsch     PetscCall(PetscContainerGetPointer(moabdata, (void**)&xmoab));
232f6829af0SVijay Mahadevan 
233f6829af0SVijay Mahadevan     /* get the local representation of the arrays from Vectors */
2349566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(xmoab->local, varray));
2359566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateBegin(vmoab->local, ADD_VALUES, SCATTER_REVERSE));
2369566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateEnd(vmoab->local, ADD_VALUES, SCATTER_REVERSE));
2379566063dSJacob Faibussowitsch     PetscCall(VecGhostRestoreLocalForm(vmoab->local, &xmoab->local));
238f6829af0SVijay Mahadevan 
239f6829af0SVijay Mahadevan     /* restore local pieces */
2409566063dSJacob Faibussowitsch     PetscCall(DMLocalToGlobalBegin(dm, vmoab->local, INSERT_VALUES, vec));
2419566063dSJacob Faibussowitsch     PetscCall(DMLocalToGlobalEnd(dm, vmoab->local, INSERT_VALUES, vec));
2429566063dSJacob Faibussowitsch     PetscCall(DMRestoreLocalVector(dm, &vmoab->local));
243f6829af0SVijay Mahadevan   }
244f6829af0SVijay Mahadevan   else {
245f6829af0SVijay Mahadevan 
246f6829af0SVijay Mahadevan     /* Get the MOAB private data */
2479566063dSJacob Faibussowitsch     PetscCall(DMMoabGetVecTag(vec, &vtag));
248f6829af0SVijay Mahadevan 
249f6829af0SVijay Mahadevan     /* Get the array data for local entities */
250f6829af0SVijay Mahadevan     merr = dmmoab->mbiface->tag_iterate(vtag, dmmoab->vlocal->begin(), dmmoab->vlocal->end(), count, reinterpret_cast<void*&>(marray), false); MBERRNM(merr);
2512c71b3e2SJacob Faibussowitsch     PetscCheckFalse(count != dmmoab->nloc + dmmoab->nghost,PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mismatch between local vertices and tag partition for Vec. %D != %D.", count, dmmoab->nloc + dmmoab->nghost);
252f6829af0SVijay Mahadevan 
253f6829af0SVijay Mahadevan     i = 0;
254f6829af0SVijay Mahadevan     for (moab::Range::iterator iter = dmmoab->vlocal->begin(); iter != dmmoab->vlocal->end(); iter++) {
255f6829af0SVijay Mahadevan       for (f = 0; f < dmmoab->numFields; f++, i++)
2563f1c6e43SVijay Mahadevan         marray[i] = (*varray)[dmmoab->lidmap[(PetscInt) * iter - dmmoab->seqstart] * dmmoab->numFields + f];
2573f1c6e43SVijay Mahadevan       //marray[i] = (*varray)[dmmoab->llmap[dmmoab->lidmap[((PetscInt)*iter-dmmoab->seqstart)]*dmmoab->numFields+f]];
258f6829af0SVijay Mahadevan     }
259f6829af0SVijay Mahadevan 
2609daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
261f6829af0SVijay Mahadevan     /* reduce the tags correctly -> should probably let the user choose how to reduce in the future
262f6829af0SVijay Mahadevan       For all FEM residual based assembly calculations, MPI_SUM should serve well */
263f6829af0SVijay Mahadevan     merr = dmmoab->pcomm->reduce_tags(vtag, MPI_SUM, *dmmoab->vlocal); MBERRV(dmmoab->mbiface, merr);
2649daf19fdSVijay Mahadevan #endif
2659566063dSJacob Faibussowitsch     PetscCall(PetscFree(*varray));
266f6829af0SVijay Mahadevan   }
267f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
268f6829af0SVijay Mahadevan }
269f6829af0SVijay Mahadevan 
270b8ecf6d3SVijay Mahadevan /*@C
271f6829af0SVijay Mahadevan   DMMoabVecGetArrayRead - Returns the read-only direct access array to the local representation of MOAB tag data for the underlying vector using locally owned+ghosted range of entities
272f6829af0SVijay Mahadevan 
273d083f849SBarry Smith   Collective
274f6829af0SVijay Mahadevan 
275d8d19677SJose E. Roman   Input Parameters:
276f6829af0SVijay Mahadevan + dm              - The DMMoab object being set
277a2b725a8SWilliam Gropp - vec             - The Vector whose underlying data is requested
278f6829af0SVijay Mahadevan 
279f6829af0SVijay Mahadevan   Output Parameter:
280f6829af0SVijay Mahadevan . array           - The local data array
281f6829af0SVijay Mahadevan 
282f6829af0SVijay Mahadevan   Level: intermediate
283f6829af0SVijay Mahadevan 
284f6829af0SVijay Mahadevan .seealso: DMMoabVecRestoreArrayRead(), DMMoabVecGetArray(), DMMoabVecRestoreArray()
285f6829af0SVijay Mahadevan @*/
286f6829af0SVijay Mahadevan PetscErrorCode  DMMoabVecGetArrayRead(DM dm, Vec vec, void* array)
287f6829af0SVijay Mahadevan {
288f6829af0SVijay Mahadevan   DM_Moab        *dmmoab;
289f6829af0SVijay Mahadevan   moab::ErrorCode merr;
290f6829af0SVijay Mahadevan   PetscInt        count, i, f;
291f6829af0SVijay Mahadevan   moab::Tag       vtag;
292f6829af0SVijay Mahadevan   PetscScalar     **varray;
293f6829af0SVijay Mahadevan   PetscScalar     *marray;
294f6829af0SVijay Mahadevan   PetscContainer  moabdata;
295f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab, *xmoab;
296f6829af0SVijay Mahadevan 
297f6829af0SVijay Mahadevan   PetscFunctionBegin;
298f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
299f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(vec, VEC_CLASSID, 2);
300f6829af0SVijay Mahadevan   PetscValidPointer(array, 3);
301f6829af0SVijay Mahadevan   dmmoab = (DM_Moab*)dm->data;
302f6829af0SVijay Mahadevan 
303f6829af0SVijay Mahadevan   /* Get the Vec_MOAB struct for the original vector */
3049566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
3059566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**)&vmoab));
306f6829af0SVijay Mahadevan 
307f6829af0SVijay Mahadevan   /* Get the real scalar array handle */
308f6829af0SVijay Mahadevan   varray = reinterpret_cast<PetscScalar**>(array);
309f6829af0SVijay Mahadevan 
310f6829af0SVijay Mahadevan   if (vmoab->is_native_vec) {
311f6829af0SVijay Mahadevan     /* get the local representation of the arrays from Vectors */
3129566063dSJacob Faibussowitsch     PetscCall(DMGetLocalVector(dm, &vmoab->local));
3139566063dSJacob Faibussowitsch     PetscCall(DMGlobalToLocalBegin(dm, vec, INSERT_VALUES, vmoab->local));
3149566063dSJacob Faibussowitsch     PetscCall(DMGlobalToLocalEnd(dm, vec, INSERT_VALUES, vmoab->local));
315f6829af0SVijay Mahadevan 
316f6829af0SVijay Mahadevan     /* Get the Vec_MOAB struct for the original vector */
3179566063dSJacob Faibussowitsch     PetscCall(PetscObjectQuery((PetscObject)vmoab->local, "MOABData", (PetscObject*) &moabdata));
3189566063dSJacob Faibussowitsch     PetscCall(PetscContainerGetPointer(moabdata, (void**)&xmoab));
319f6829af0SVijay Mahadevan 
320f6829af0SVijay Mahadevan     /* get the local representation of the arrays from Vectors */
3219566063dSJacob Faibussowitsch     PetscCall(VecGhostGetLocalForm(vmoab->local, &xmoab->local));
3229566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateBegin(vmoab->local, INSERT_VALUES, SCATTER_FORWARD));
3239566063dSJacob Faibussowitsch     PetscCall(VecGhostUpdateEnd(vmoab->local, INSERT_VALUES, SCATTER_FORWARD));
3249566063dSJacob Faibussowitsch     PetscCall(VecGetArray(xmoab->local, varray));
325f6829af0SVijay Mahadevan   }
326f6829af0SVijay Mahadevan   else {
327f6829af0SVijay Mahadevan     /* Get the MOAB private data */
3289566063dSJacob Faibussowitsch     PetscCall(DMMoabGetVecTag(vec, &vtag));
329f6829af0SVijay Mahadevan 
3309daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
331f6829af0SVijay Mahadevan     /* exchange the data into ghost cells first */
332f6829af0SVijay Mahadevan     merr = dmmoab->pcomm->exchange_tags(vtag, *dmmoab->vlocal); MBERRNM(merr);
3339daf19fdSVijay Mahadevan #endif
3349566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1((dmmoab->nloc + dmmoab->nghost) * dmmoab->numFields, varray));
335f6829af0SVijay Mahadevan 
336f6829af0SVijay Mahadevan     /* Get the array data for local entities */
337f6829af0SVijay Mahadevan     merr = dmmoab->mbiface->tag_iterate(vtag, dmmoab->vlocal->begin(), dmmoab->vlocal->end(), count, reinterpret_cast<void*&>(marray), false); MBERRNM(merr);
3382c71b3e2SJacob Faibussowitsch     PetscCheckFalse(count != dmmoab->nloc + dmmoab->nghost,PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mismatch between local vertices and tag partition for Vec. %D != %D.", count, dmmoab->nloc + dmmoab->nghost);
339f6829af0SVijay Mahadevan 
340f6829af0SVijay Mahadevan     i = 0;
341f6829af0SVijay Mahadevan     for (moab::Range::iterator iter = dmmoab->vlocal->begin(); iter != dmmoab->vlocal->end(); iter++) {
342f6829af0SVijay Mahadevan       for (f = 0; f < dmmoab->numFields; f++, i++)
3433f1c6e43SVijay Mahadevan         (*varray)[dmmoab->lidmap[(PetscInt)*iter - dmmoab->seqstart]*dmmoab->numFields + f] = marray[i];
3443f1c6e43SVijay Mahadevan       //(*varray)[dmmoab->llmap[dmmoab->lidmap[((PetscInt)*iter-dmmoab->seqstart)]*dmmoab->numFields+f]]=marray[i];
345f6829af0SVijay Mahadevan     }
346f6829af0SVijay Mahadevan   }
347f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
348f6829af0SVijay Mahadevan }
349f6829af0SVijay Mahadevan 
350b8ecf6d3SVijay Mahadevan /*@C
3514597dd3dSJose E. Roman   DMMoabVecRestoreArrayRead - Restores the read-only direct access array obtained via DMMoabVecGetArray
352f6829af0SVijay Mahadevan 
353d083f849SBarry Smith   Collective
354f6829af0SVijay Mahadevan 
35597bb3fdcSJose E. Roman   Input Parameters:
356f6829af0SVijay Mahadevan + dm              - The DMMoab object being set
357f6829af0SVijay Mahadevan . vec             - The Vector whose underlying data is requested
358a2b725a8SWilliam Gropp - array           - The local data array
359f6829af0SVijay Mahadevan 
360f6829af0SVijay Mahadevan   Level: intermediate
361f6829af0SVijay Mahadevan 
362f6829af0SVijay Mahadevan .seealso: DMMoabVecGetArrayRead(), DMMoabVecGetArray(), DMMoabVecRestoreArray()
363f6829af0SVijay Mahadevan @*/
364f6829af0SVijay Mahadevan PetscErrorCode  DMMoabVecRestoreArrayRead(DM dm, Vec vec, void* array)
365f6829af0SVijay Mahadevan {
366f6829af0SVijay Mahadevan   PetscScalar     **varray;
367f6829af0SVijay Mahadevan   PetscContainer  moabdata;
368f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab, *xmoab;
369f6829af0SVijay Mahadevan 
370f6829af0SVijay Mahadevan   PetscFunctionBegin;
371f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
372f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(vec, VEC_CLASSID, 2);
373f6829af0SVijay Mahadevan   PetscValidPointer(array, 3);
374f6829af0SVijay Mahadevan 
375f6829af0SVijay Mahadevan   /* Get the Vec_MOAB struct for the original vector */
3769566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)vec, "MOABData", (PetscObject*) &moabdata));
3779566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**)&vmoab));
378f6829af0SVijay Mahadevan 
379f6829af0SVijay Mahadevan   /* Get the real scalar array handle */
380f6829af0SVijay Mahadevan   varray = reinterpret_cast<PetscScalar**>(array);
381f6829af0SVijay Mahadevan 
382f6829af0SVijay Mahadevan   if (vmoab->is_native_vec) {
383f6829af0SVijay Mahadevan     /* Get the Vec_MOAB struct for the original vector */
3849566063dSJacob Faibussowitsch     PetscCall(PetscObjectQuery((PetscObject)vmoab->local, "MOABData", (PetscObject*) &moabdata));
3859566063dSJacob Faibussowitsch     PetscCall(PetscContainerGetPointer(moabdata, (void**)&xmoab));
386f6829af0SVijay Mahadevan 
387f6829af0SVijay Mahadevan     /* restore the local representation of the arrays from Vectors */
3889566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(xmoab->local, varray));
3899566063dSJacob Faibussowitsch     PetscCall(VecGhostRestoreLocalForm(vmoab->local, &xmoab->local));
390f6829af0SVijay Mahadevan 
391f6829af0SVijay Mahadevan     /* restore local pieces */
3929566063dSJacob Faibussowitsch     PetscCall(DMRestoreLocalVector(dm, &vmoab->local));
393f6829af0SVijay Mahadevan   }
394f6829af0SVijay Mahadevan   else {
395f6829af0SVijay Mahadevan     /* Nothing to do but just free the memory allocated before */
3969566063dSJacob Faibussowitsch     PetscCall(PetscFree(*varray));
397f6829af0SVijay Mahadevan 
398f6829af0SVijay Mahadevan   }
399f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
400f6829af0SVijay Mahadevan }
401f6829af0SVijay Mahadevan 
402f6829af0SVijay Mahadevan PetscErrorCode DMCreateVector_Moab_Private(DM dm, moab::Tag tag, const moab::Range* userrange, PetscBool is_global_vec, PetscBool destroy_tag, Vec *vec)
403032b8ab6SVijay Mahadevan {
404032b8ab6SVijay Mahadevan   moab::ErrorCode   merr;
405032b8ab6SVijay Mahadevan   PetscBool         is_newtag;
406351b8a77SVijay Mahadevan   const moab::Range *range;
407bb8f3634SVijay Mahadevan   PetscInt          count, lnative_vec, gnative_vec;
4089088682fSVijay Mahadevan   std::string       ttname;
409c4427235SVijay Mahadevan   PetscScalar       *data_ptr, *defaultvals;
410032b8ab6SVijay Mahadevan 
411db66d124SVijay Mahadevan   Vec_MOAB *vmoab;
412032b8ab6SVijay Mahadevan   DM_Moab *dmmoab = (DM_Moab*)dm->data;
4139daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
414032b8ab6SVijay Mahadevan   moab::ParallelComm *pcomm = dmmoab->pcomm;
4159daf19fdSVijay Mahadevan #endif
416032b8ab6SVijay Mahadevan   moab::Interface *mbiface = dmmoab->mbiface;
417032b8ab6SVijay Mahadevan 
418032b8ab6SVijay Mahadevan   PetscFunctionBegin;
419*08401ef6SPierre Jolivet   PetscCheck(sizeof(PetscReal) == sizeof(PetscScalar),PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "MOAB tags only support Real types (Complex-type unsupported)");
420032b8ab6SVijay Mahadevan   if (!userrange) range = dmmoab->vowned;
421032b8ab6SVijay Mahadevan   else range = userrange;
4227a8be351SBarry Smith   PetscCheck(range,PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "Input range cannot be empty or call DMSetUp first.");
423032b8ab6SVijay Mahadevan 
4243ac71f70SVijay Mahadevan #ifndef USE_NATIVE_PETSCVEC
425bb8f3634SVijay Mahadevan   /* If the tag data is in a single sequence, use PETSc native vector since tag_iterate isn't useful anymore */
426bb8f3634SVijay Mahadevan   lnative_vec = (range->psize() - 1);
4273ac71f70SVijay Mahadevan #else
4283ac71f70SVijay Mahadevan   lnative_vec = 1; /* NOTE: Testing PETSc vector: will force to create native vector all the time */
4296465f021SVijay Mahadevan //  lnative_vec=0; /* NOTE: Testing MOAB vector: will force to create MOAB tag_iterate based vector all the time */
430f6829af0SVijay Mahadevan #endif
4313ac71f70SVijay Mahadevan 
4329daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
4331c2dc1cbSBarry Smith   PetscCall(MPIU_Allreduce(&lnative_vec, &gnative_vec, 1, MPI_INT, MPI_MAX, (((PetscObject)dm)->comm)));
4349daf19fdSVijay Mahadevan #else
4359daf19fdSVijay Mahadevan   gnative_vec = lnative_vec;
4369daf19fdSVijay Mahadevan #endif
437bb8f3634SVijay Mahadevan 
438bb8f3634SVijay Mahadevan   /* Create the MOAB internal data object */
4399566063dSJacob Faibussowitsch   PetscCall(PetscNew(&vmoab));
440bb8f3634SVijay Mahadevan   vmoab->is_native_vec = (gnative_vec > 0 ? PETSC_TRUE : PETSC_FALSE);
441bb8f3634SVijay Mahadevan 
442bb8f3634SVijay Mahadevan   if (!vmoab->is_native_vec) {
4433ac71f70SVijay Mahadevan     merr = moab::MB_SUCCESS;
44464e1c140SVijay Mahadevan     if (tag != 0) merr = mbiface->tag_get_name(tag, ttname);
44564e1c140SVijay Mahadevan     if (!ttname.length() || merr != moab::MB_SUCCESS) {
446db66d124SVijay Mahadevan       /* get the new name for the anonymous MOABVec -> the tag_name will be destroyed along with Tag */
447c528d872SBarry Smith       char *tag_name = NULL;
4489daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
4499566063dSJacob Faibussowitsch       PetscCall(DMVecCreateTagName_Moab_Private(mbiface,pcomm,&tag_name));
4509daf19fdSVijay Mahadevan #else
4519566063dSJacob Faibussowitsch       PetscCall(DMVecCreateTagName_Moab_Private(mbiface,&tag_name));
4529daf19fdSVijay Mahadevan #endif
453032b8ab6SVijay Mahadevan       is_newtag = PETSC_TRUE;
454032b8ab6SVijay Mahadevan 
455db66d124SVijay Mahadevan       /* Create the default value for the tag (all zeros) */
4569566063dSJacob Faibussowitsch       PetscCall(PetscCalloc1(dmmoab->numFields, &defaultvals));
457032b8ab6SVijay Mahadevan 
458db66d124SVijay Mahadevan       /* Create the tag */
459d1839e75SVijay Mahadevan       merr = mbiface->tag_get_handle(tag_name, dmmoab->numFields, moab::MB_TYPE_DOUBLE, tag,
460c4427235SVijay Mahadevan                                      moab::MB_TAG_DENSE | moab::MB_TAG_CREAT, defaultvals); MBERRNM(merr);
4619566063dSJacob Faibussowitsch       PetscCall(PetscFree(tag_name));
4629566063dSJacob Faibussowitsch       PetscCall(PetscFree(defaultvals));
463032b8ab6SVijay Mahadevan     }
464032b8ab6SVijay Mahadevan     else {
465db66d124SVijay Mahadevan       /* Make sure the tag data is of type "double" */
466032b8ab6SVijay Mahadevan       moab::DataType tag_type;
467032b8ab6SVijay Mahadevan       merr = mbiface->tag_get_data_type(tag, tag_type); MBERRNM(merr);
4682c71b3e2SJacob Faibussowitsch       PetscCheckFalse(tag_type != moab::MB_TYPE_DOUBLE,PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Tag data type must be MB_TYPE_DOUBLE");
469032b8ab6SVijay Mahadevan       is_newtag = destroy_tag;
470032b8ab6SVijay Mahadevan     }
471032b8ab6SVijay Mahadevan 
472032b8ab6SVijay Mahadevan     vmoab->tag = tag;
473bb8f3634SVijay Mahadevan     vmoab->new_tag = is_newtag;
474bb8f3634SVijay Mahadevan   }
475032b8ab6SVijay Mahadevan   vmoab->mbiface = mbiface;
4769daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
477032b8ab6SVijay Mahadevan   vmoab->pcomm = pcomm;
4789daf19fdSVijay Mahadevan #endif
479032b8ab6SVijay Mahadevan   vmoab->is_global_vec = is_global_vec;
480bb8f3634SVijay Mahadevan   vmoab->tag_size = dmmoab->bs;
481032b8ab6SVijay Mahadevan 
482bb8f3634SVijay Mahadevan   if (vmoab->is_native_vec) {
483fc418013SVijay Mahadevan 
484bb8f3634SVijay Mahadevan     /* Create the PETSc Vector directly and attach our functions accordingly */
485bb8f3634SVijay Mahadevan     if (!is_global_vec) {
486bb8f3634SVijay Mahadevan       /* This is an MPI Vector with ghosted padding */
4879566063dSJacob Faibussowitsch       PetscCall(VecCreateGhostBlock((((PetscObject)dm)->comm), dmmoab->bs, dmmoab->numFields * dmmoab->nloc,dmmoab->numFields * dmmoab->n, dmmoab->nghost, &dmmoab->gsindices[dmmoab->nloc], vec));
4885f80ce2aSJacob Faibussowitsch     } else {
489bb8f3634SVijay Mahadevan       /* This is an MPI/SEQ Vector */
4909566063dSJacob Faibussowitsch       PetscCall(VecCreate((((PetscObject)dm)->comm), vec));
4919566063dSJacob Faibussowitsch       PetscCall(VecSetSizes(*vec, dmmoab->numFields * dmmoab->nloc, PETSC_DECIDE));
4929566063dSJacob Faibussowitsch       PetscCall(VecSetBlockSize(*vec, dmmoab->bs));
4939566063dSJacob Faibussowitsch       PetscCall(VecSetType(*vec, VECMPI));
494bb8f3634SVijay Mahadevan     }
4955f80ce2aSJacob Faibussowitsch   } else {
496db66d124SVijay Mahadevan     /* Call tag_iterate. This will cause MOAB to allocate memory for the
497db66d124SVijay Mahadevan        tag data if it hasn't already happened */
498032b8ab6SVijay Mahadevan     merr = mbiface->tag_iterate(tag, range->begin(), range->end(), count, (void*&)data_ptr); MBERRNM(merr);
499032b8ab6SVijay Mahadevan 
500bb8f3634SVijay Mahadevan     /* set the reference for vector range */
501bb8f3634SVijay Mahadevan     vmoab->tag_range = new moab::Range(*range);
502addae81cSVijay Mahadevan     merr = mbiface->tag_get_length(tag, dmmoab->numFields); MBERRNM(merr);
503032b8ab6SVijay Mahadevan 
504db66d124SVijay Mahadevan     /* Create the PETSc Vector
505db66d124SVijay Mahadevan       Query MOAB mesh to check if there are any ghosted entities
506032b8ab6SVijay Mahadevan         -> if we do, create a ghosted vector to map correctly to the same layout
507032b8ab6SVijay Mahadevan         -> else, create a non-ghosted parallel vector */
508bb8f3634SVijay Mahadevan     if (!is_global_vec) {
509db66d124SVijay Mahadevan       /* This is an MPI Vector with ghosted padding */
5109566063dSJacob Faibussowitsch       PetscCall(VecCreateGhostBlockWithArray((((PetscObject)dm)->comm), dmmoab->bs, dmmoab->numFields * dmmoab->nloc,dmmoab->numFields * dmmoab->n, dmmoab->nghost, &dmmoab->gsindices[dmmoab->nloc], data_ptr, vec));
5115f80ce2aSJacob Faibussowitsch     } else {
512bb8f3634SVijay Mahadevan       /* This is an MPI Vector without ghosted padding */
5139566063dSJacob Faibussowitsch       PetscCall(VecCreateMPIWithArray((((PetscObject)dm)->comm), dmmoab->bs, dmmoab->numFields * range->size(),PETSC_DECIDE, data_ptr, vec));
514032b8ab6SVijay Mahadevan     }
515bb8f3634SVijay Mahadevan   }
5169566063dSJacob Faibussowitsch   PetscCall(VecSetFromOptions(*vec));
517032b8ab6SVijay Mahadevan 
518f6829af0SVijay Mahadevan   /* create a container and store the internal MOAB data for faster access based on Entities etc */
519032b8ab6SVijay Mahadevan   PetscContainer moabdata;
5209566063dSJacob Faibussowitsch   PetscCall(PetscContainerCreate(PETSC_COMM_WORLD, &moabdata));
5219566063dSJacob Faibussowitsch   PetscCall(PetscContainerSetPointer(moabdata, vmoab));
5229566063dSJacob Faibussowitsch   PetscCall(PetscContainerSetUserDestroy(moabdata, DMVecUserDestroy_Moab));
5239566063dSJacob Faibussowitsch   PetscCall(PetscObjectCompose((PetscObject) * vec, "MOABData", (PetscObject)moabdata));
524f6829af0SVijay Mahadevan   (*vec)->ops->duplicate = DMVecDuplicate_Moab;
5259566063dSJacob Faibussowitsch   PetscCall(PetscContainerDestroy(&moabdata));
526032b8ab6SVijay Mahadevan 
527db66d124SVijay Mahadevan   /* Vector created, manually set local to global mapping */
5286d9eb265SVijay Mahadevan   if (dmmoab->ltog_map) {
5299566063dSJacob Faibussowitsch     PetscCall(VecSetLocalToGlobalMapping(*vec, dmmoab->ltog_map));
5306d9eb265SVijay Mahadevan   }
531032b8ab6SVijay Mahadevan 
532032b8ab6SVijay Mahadevan   /* set the DM reference to the vector */
5339566063dSJacob Faibussowitsch   PetscCall(VecSetDM(*vec, dm));
534032b8ab6SVijay Mahadevan   PetscFunctionReturn(0);
535032b8ab6SVijay Mahadevan }
536032b8ab6SVijay Mahadevan 
537f6829af0SVijay Mahadevan /*  DMVecCreateTagName_Moab_Private
538032b8ab6SVijay Mahadevan  *
539032b8ab6SVijay Mahadevan  *  Creates a unique tag name that will be shared across processes. If
540032b8ab6SVijay Mahadevan  *  pcomm is NULL, then this is a serial vector. A unique tag name
541032b8ab6SVijay Mahadevan  *  will be returned in tag_name in either case.
542032b8ab6SVijay Mahadevan  *
543032b8ab6SVijay Mahadevan  *  The tag names have the format _PETSC_VEC_N where N is some integer.
544032b8ab6SVijay Mahadevan  *
545032b8ab6SVijay Mahadevan  *  NOTE: The tag_name is allocated in this routine; The user needs to free
546032b8ab6SVijay Mahadevan  *        the character array.
547032b8ab6SVijay Mahadevan  */
5489daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
5499daf19fdSVijay Mahadevan PetscErrorCode DMVecCreateTagName_Moab_Private(moab::Interface *mbiface, moab::ParallelComm *pcomm, char** tag_name)
5509daf19fdSVijay Mahadevan #else
5519daf19fdSVijay Mahadevan PetscErrorCode DMVecCreateTagName_Moab_Private(moab::Interface *mbiface, char** tag_name)
5529daf19fdSVijay Mahadevan #endif
553032b8ab6SVijay Mahadevan {
554032b8ab6SVijay Mahadevan   moab::ErrorCode mberr;
555032b8ab6SVijay Mahadevan   PetscInt        n, global_n;
556032b8ab6SVijay Mahadevan   moab::Tag indexTag;
557032b8ab6SVijay Mahadevan 
558032b8ab6SVijay Mahadevan   PetscFunctionBegin;
559032b8ab6SVijay Mahadevan   const char*       PVEC_PREFIX      = "__PETSC_VEC_";
5609566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(PETSC_MAX_PATH_LEN, tag_name));
561032b8ab6SVijay Mahadevan 
562032b8ab6SVijay Mahadevan   moab::EntityHandle rootset = mbiface->get_root_set();
563032b8ab6SVijay Mahadevan 
5649daf19fdSVijay Mahadevan   /* Check to see if there are any PETSc vectors defined */
565efd17f3eSVijay Mahadevan   /* Create a tag in MOAB mesh to index and keep track of number of Petsc vec tags */
566032b8ab6SVijay Mahadevan   mberr = mbiface->tag_get_handle("__PETSC_VECS__", 1, moab::MB_TYPE_INTEGER, indexTag,
567032b8ab6SVijay Mahadevan                                   moab::MB_TAG_SPARSE | moab::MB_TAG_CREAT, 0); MBERRNM(mberr);
568032b8ab6SVijay Mahadevan   mberr = mbiface->tag_get_data(indexTag, &rootset, 1, &n);
569032b8ab6SVijay Mahadevan   if (mberr == moab::MB_TAG_NOT_FOUND) n = 0; /* this is the first temporary vector */
570032b8ab6SVijay Mahadevan   else MBERRNM(mberr);
571032b8ab6SVijay Mahadevan 
572032b8ab6SVijay Mahadevan   /* increment the new value of n */
573032b8ab6SVijay Mahadevan   ++n;
574032b8ab6SVijay Mahadevan 
5759daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
576efd17f3eSVijay Mahadevan   /* Make sure that n is consistent across all processes */
5771c2dc1cbSBarry Smith   PetscCall(MPIU_Allreduce(&n, &global_n, 1, MPI_INT, MPI_MAX, pcomm->comm()));
5789daf19fdSVijay Mahadevan #else
5799daf19fdSVijay Mahadevan   global_n = n;
5809daf19fdSVijay Mahadevan #endif
581032b8ab6SVijay Mahadevan 
582efd17f3eSVijay Mahadevan   /* Set the new name accordingly and return */
5839566063dSJacob Faibussowitsch   PetscCall(PetscSNPrintf(*tag_name, PETSC_MAX_PATH_LEN - 1, "%s_%D", PVEC_PREFIX, global_n));
584032b8ab6SVijay Mahadevan   mberr = mbiface->tag_set_data(indexTag, &rootset, 1, (const void*)&global_n); MBERRNM(mberr);
585032b8ab6SVijay Mahadevan   PetscFunctionReturn(0);
586032b8ab6SVijay Mahadevan }
587032b8ab6SVijay Mahadevan 
588304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode DMCreateGlobalVector_Moab(DM dm, Vec *gvec)
589f6829af0SVijay Mahadevan {
590f6829af0SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
591f6829af0SVijay Mahadevan 
592f6829af0SVijay Mahadevan   PetscFunctionBegin;
593f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
594f6829af0SVijay Mahadevan   PetscValidPointer(gvec,2);
5959566063dSJacob Faibussowitsch   PetscCall(DMCreateVector_Moab_Private(dm,NULL,dmmoab->vowned,PETSC_TRUE,PETSC_TRUE,gvec));
596f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
597f6829af0SVijay Mahadevan }
598f6829af0SVijay Mahadevan 
599304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode DMCreateLocalVector_Moab(DM dm, Vec *lvec)
600f6829af0SVijay Mahadevan {
601f6829af0SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
602f6829af0SVijay Mahadevan 
603f6829af0SVijay Mahadevan   PetscFunctionBegin;
604f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
605f6829af0SVijay Mahadevan   PetscValidPointer(lvec,2);
6069566063dSJacob Faibussowitsch   PetscCall(DMCreateVector_Moab_Private(dm,NULL,dmmoab->vlocal,PETSC_FALSE,PETSC_TRUE,lvec));
607f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
608f6829af0SVijay Mahadevan }
609f6829af0SVijay Mahadevan 
610f6829af0SVijay Mahadevan PetscErrorCode DMVecDuplicate_Moab(Vec x, Vec *y)
611f6829af0SVijay Mahadevan {
612f6829af0SVijay Mahadevan   DM             dm;
613f6829af0SVijay Mahadevan   PetscContainer  moabdata;
614f6829af0SVijay Mahadevan   Vec_MOAB        *vmoab;
615f6829af0SVijay Mahadevan 
616f6829af0SVijay Mahadevan   PetscFunctionBegin;
617f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(x, VEC_CLASSID, 1);
618f6829af0SVijay Mahadevan   PetscValidPointer(y, 2);
619f6829af0SVijay Mahadevan 
620f6829af0SVijay Mahadevan   /* Get the Vec_MOAB struct for the original vector */
6219566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)x, "MOABData", (PetscObject*) &moabdata));
6229566063dSJacob Faibussowitsch   PetscCall(PetscContainerGetPointer(moabdata, (void**)&vmoab));
623f6829af0SVijay Mahadevan 
6249566063dSJacob Faibussowitsch   PetscCall(VecGetDM(x, &dm));
625f6829af0SVijay Mahadevan   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
626f6829af0SVijay Mahadevan 
6279566063dSJacob Faibussowitsch   PetscCall(DMCreateVector_Moab_Private(dm,NULL,vmoab->tag_range,vmoab->is_global_vec,PETSC_TRUE,y));
6289566063dSJacob Faibussowitsch   PetscCall(VecSetDM(*y, dm));
629f6829af0SVijay Mahadevan   PetscFunctionReturn(0);
630f6829af0SVijay Mahadevan }
631f6829af0SVijay Mahadevan 
632f6829af0SVijay Mahadevan PetscErrorCode DMVecUserDestroy_Moab(void *user)
633032b8ab6SVijay Mahadevan {
634efd17f3eSVijay Mahadevan   Vec_MOAB        *vmoab = (Vec_MOAB*)user;
635032b8ab6SVijay Mahadevan   moab::ErrorCode merr;
636032b8ab6SVijay Mahadevan 
637032b8ab6SVijay Mahadevan   PetscFunctionBegin;
638032b8ab6SVijay Mahadevan   if (vmoab->new_tag && vmoab->tag) {
639efd17f3eSVijay Mahadevan     /* Tag was created via a call to VecDuplicate, delete the underlying tag in MOAB */
640032b8ab6SVijay Mahadevan     merr = vmoab->mbiface->tag_delete(vmoab->tag); MBERRNM(merr);
641032b8ab6SVijay Mahadevan   }
642032b8ab6SVijay Mahadevan   delete vmoab->tag_range;
643c528d872SBarry Smith   vmoab->tag = NULL;
644c528d872SBarry Smith   vmoab->mbiface = NULL;
6459daf19fdSVijay Mahadevan #ifdef MOAB_HAVE_MPI
646c528d872SBarry Smith   vmoab->pcomm = NULL;
6479daf19fdSVijay Mahadevan #endif
6489566063dSJacob Faibussowitsch   PetscCall(PetscFree(vmoab));
649032b8ab6SVijay Mahadevan   PetscFunctionReturn(0);
650032b8ab6SVijay Mahadevan }
651032b8ab6SVijay Mahadevan 
652304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode  DMGlobalToLocalBegin_Moab(DM dm, Vec g, InsertMode mode, Vec l)
653db66d124SVijay Mahadevan {
654db66d124SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
655db66d124SVijay Mahadevan 
656db66d124SVijay Mahadevan   PetscFunctionBegin;
6579566063dSJacob Faibussowitsch   PetscCall(VecScatterBegin(dmmoab->ltog_sendrecv, g, l, mode, SCATTER_REVERSE));
658db66d124SVijay Mahadevan   PetscFunctionReturn(0);
659db66d124SVijay Mahadevan }
660db66d124SVijay Mahadevan 
661304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode  DMGlobalToLocalEnd_Moab(DM dm, Vec g, InsertMode mode, Vec l)
662db66d124SVijay Mahadevan {
663db66d124SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
664db66d124SVijay Mahadevan 
665db66d124SVijay Mahadevan   PetscFunctionBegin;
6669566063dSJacob Faibussowitsch   PetscCall(VecScatterEnd(dmmoab->ltog_sendrecv, g, l, mode, SCATTER_REVERSE));
667db66d124SVijay Mahadevan   PetscFunctionReturn(0);
668db66d124SVijay Mahadevan }
669db66d124SVijay Mahadevan 
670304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode  DMLocalToGlobalBegin_Moab(DM dm, Vec l, InsertMode mode, Vec g)
671db66d124SVijay Mahadevan {
672db66d124SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
673db66d124SVijay Mahadevan 
674db66d124SVijay Mahadevan   PetscFunctionBegin;
6759566063dSJacob Faibussowitsch   PetscCall(VecScatterBegin(dmmoab->ltog_sendrecv, l, g, mode, SCATTER_FORWARD));
676db66d124SVijay Mahadevan   PetscFunctionReturn(0);
677db66d124SVijay Mahadevan }
678db66d124SVijay Mahadevan 
679304006b3SVijay Mahadevan PETSC_EXTERN PetscErrorCode  DMLocalToGlobalEnd_Moab(DM dm, Vec l, InsertMode mode, Vec g)
680db66d124SVijay Mahadevan {
681db66d124SVijay Mahadevan   DM_Moab         *dmmoab = (DM_Moab*)dm->data;
682db66d124SVijay Mahadevan 
683db66d124SVijay Mahadevan   PetscFunctionBegin;
6849566063dSJacob Faibussowitsch   PetscCall(VecScatterEnd(dmmoab->ltog_sendrecv, l, g, mode, SCATTER_FORWARD));
685db66d124SVijay Mahadevan   PetscFunctionReturn(0);
686db66d124SVijay Mahadevan }
687