xref: /petsc/src/dm/impls/plex/plexceed.c (revision 5f80ce2ab25dff0f4601e710601cbbcecf323266)
1f918ec44SMatthew G. Knepley #include <petsc/private/dmpleximpl.h>           /*I      "petscdmplex.h"          I*/
2f918ec44SMatthew G. Knepley 
3a2c9b50fSJeremy L Thompson /*@C
4a2c9b50fSJeremy L Thompson   DMPlexGetLocalOffsets - Allocate and populate array of local offsets.
5a2c9b50fSJeremy L Thompson 
6a2c9b50fSJeremy L Thompson   Input Parameters:
7a2c9b50fSJeremy L Thompson   dm - The DMPlex object
8a2c9b50fSJeremy L Thompson   domain_label - label for DMPlex domain, or NULL for whole domain
9a2c9b50fSJeremy L Thompson   label_value - Stratum value
10a2c9b50fSJeremy L Thompson   height - Height of target cells in DMPlex topology
11a2c9b50fSJeremy L Thompson   dm_field - Index of DMPlex field
12a2c9b50fSJeremy L Thompson 
13a2c9b50fSJeremy L Thompson   Output Parameters:
14a2c9b50fSJeremy L Thompson   num_cells - Number of local cells
15a2c9b50fSJeremy L Thompson   cell_size - Size of each cell, given by cell_size * num_comp = num_dof
16a2c9b50fSJeremy L Thompson   num_comp - Number of components per dof
17a2c9b50fSJeremy L Thompson   l_size - Size of local vector
18a2c9b50fSJeremy L Thompson   offsets - Allocated offsets array for cells
19a2c9b50fSJeremy L Thompson 
20a2c9b50fSJeremy L Thompson   Notes: Allocate and populate array of shape [num_cells, cell_size] defining offsets for each value (cell, node) for local vector of the DMPlex field. All offsets are in the range [0, l_size - 1]. Caller is responsible for freeing the offsets array using PetscFree().
21a2c9b50fSJeremy L Thompson 
22a2c9b50fSJeremy L Thompson   Level: developer
23a2c9b50fSJeremy L Thompson 
24a2c9b50fSJeremy L Thompson .seealso: DMPlexGetClosureIndices(), DMPlexSetClosurePermutationTensor(), DMPlexGetCeedRestriction()
25a2c9b50fSJeremy L Thompson @*/
26a2c9b50fSJeremy L Thompson PetscErrorCode DMPlexGetLocalOffsets(DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field, PetscInt *num_cells, PetscInt *cell_size, PetscInt *num_comp, PetscInt *l_size, PetscInt **offsets)
27a2c9b50fSJeremy L Thompson {
28a2c9b50fSJeremy L Thompson   PetscDS         ds = NULL;
29a2c9b50fSJeremy L Thompson   PetscFE         fe;
30a2c9b50fSJeremy L Thompson   PetscSection    section;
317a17eebaSJed Brown   PetscInt        dim, ds_field = -1;
32a2c9b50fSJeremy L Thompson   PetscInt       *restr_indices;
33a2c9b50fSJeremy L Thompson   const PetscInt *iter_indices;
34a2c9b50fSJeremy L Thompson   IS              iter_is;
35a2c9b50fSJeremy L Thompson 
36*5f80ce2aSJacob Faibussowitsch   PetscFunctionBeginUser;
37*5f80ce2aSJacob Faibussowitsch   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
38*5f80ce2aSJacob Faibussowitsch   CHKERRQ(DMGetLocalSection(dm, &section));
39*5f80ce2aSJacob Faibussowitsch   CHKERRQ(DMGetDimension(dm, &dim));
407a17eebaSJed Brown   {
417a17eebaSJed Brown     IS              field_is;
427a17eebaSJed Brown     const PetscInt *fields;
437a17eebaSJed Brown     PetscInt        num_fields;
44*5f80ce2aSJacob Faibussowitsch 
45*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMGetRegionDS(dm, domain_label, &field_is, &ds));
46a2c9b50fSJeremy L Thompson     // Translate dm_field to ds_field
47*5f80ce2aSJacob Faibussowitsch     CHKERRQ(ISGetIndices(field_is, &fields));
48*5f80ce2aSJacob Faibussowitsch     CHKERRQ(ISGetSize(field_is, &num_fields));
497a17eebaSJed Brown     for (PetscInt i=0; i<num_fields; i++) {
507a17eebaSJed Brown       if (dm_field == fields[i]) {
517a17eebaSJed Brown         ds_field = i;
52a2c9b50fSJeremy L Thompson         break;
53a2c9b50fSJeremy L Thompson       }
54a2c9b50fSJeremy L Thompson     }
55*5f80ce2aSJacob Faibussowitsch     CHKERRQ(ISRestoreIndices(field_is, &fields));
56a2c9b50fSJeremy L Thompson   }
57*5f80ce2aSJacob Faibussowitsch   PetscCheck(ds_field != -1,PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Could not find dm_field %D in DS", dm_field);
58a2c9b50fSJeremy L Thompson 
59a2c9b50fSJeremy L Thompson   {
60a2c9b50fSJeremy L Thompson     PetscInt depth;
61a2c9b50fSJeremy L Thompson     DMLabel  depth_label;
62a2c9b50fSJeremy L Thompson     IS       depth_is;
63*5f80ce2aSJacob Faibussowitsch 
64*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexGetDepth(dm, &depth));
65*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexGetDepthLabel(dm, &depth_label));
66*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMLabelGetStratumIS(depth_label, depth - height, &depth_is));
67a2c9b50fSJeremy L Thompson     if (domain_label) {
68a2c9b50fSJeremy L Thompson       IS domain_is;
69*5f80ce2aSJacob Faibussowitsch 
70*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMLabelGetStratumIS(domain_label, label_value, &domain_is));
71a2c9b50fSJeremy L Thompson       if (domain_is) { // domainIS is non-empty
72*5f80ce2aSJacob Faibussowitsch         CHKERRQ(ISIntersect(depth_is, domain_is, &iter_is));
73*5f80ce2aSJacob Faibussowitsch         CHKERRQ(ISDestroy(&domain_is));
74a2c9b50fSJeremy L Thompson       } else { // domainIS is NULL (empty)
75a2c9b50fSJeremy L Thompson         iter_is = NULL;
76a2c9b50fSJeremy L Thompson       }
77*5f80ce2aSJacob Faibussowitsch       CHKERRQ(ISDestroy(&depth_is));
78a2c9b50fSJeremy L Thompson     } else {
79a2c9b50fSJeremy L Thompson       iter_is = depth_is;
80a2c9b50fSJeremy L Thompson     }
81a2c9b50fSJeremy L Thompson     if (iter_is) {
82*5f80ce2aSJacob Faibussowitsch       CHKERRQ(ISGetLocalSize(iter_is, num_cells));
83*5f80ce2aSJacob Faibussowitsch       CHKERRQ(ISGetIndices(iter_is, &iter_indices));
84a2c9b50fSJeremy L Thompson     } else {
85a2c9b50fSJeremy L Thompson       *num_cells = 0;
86a2c9b50fSJeremy L Thompson       iter_indices = NULL;
87a2c9b50fSJeremy L Thompson     }
88a2c9b50fSJeremy L Thompson   }
89a2c9b50fSJeremy L Thompson 
90a2c9b50fSJeremy L Thompson   {
91a2c9b50fSJeremy L Thompson     PetscDualSpace dual_space;
92a2c9b50fSJeremy L Thompson     PetscInt       num_dual_basis_vectors;
93*5f80ce2aSJacob Faibussowitsch 
94*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscDSGetDiscretization(ds, ds_field, (PetscObject*)&fe));
95*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscFEGetHeightSubspace(fe, height, &fe));
96*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscFEGetDualSpace(fe, &dual_space));
97*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscDualSpaceGetDimension(dual_space, &num_dual_basis_vectors));
98*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscDualSpaceGetNumComponents(dual_space, num_comp));
99*5f80ce2aSJacob Faibussowitsch     PetscCheck(num_dual_basis_vectors % *num_comp == 0,PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for number of dual basis vectors %D not divisible by %D components", num_dual_basis_vectors, *num_comp);
100a2c9b50fSJeremy L Thompson     *cell_size = num_dual_basis_vectors / *num_comp;
101a2c9b50fSJeremy L Thompson   }
102a2c9b50fSJeremy L Thompson   PetscInt restr_size = (*num_cells)*(*cell_size);
103*5f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMalloc1(restr_size, &restr_indices));
104a2c9b50fSJeremy L Thompson   PetscInt cell_offset = 0;
105a2c9b50fSJeremy L Thompson 
106a2c9b50fSJeremy L Thompson   PetscInt P = (PetscInt) pow(*cell_size, 1.0 / (dim - height));
107a2c9b50fSJeremy L Thompson   for (PetscInt p = 0; p < *num_cells; p++) {
108a2c9b50fSJeremy L Thompson     PetscBool flip = PETSC_FALSE;
109a2c9b50fSJeremy L Thompson     PetscInt c = iter_indices[p];
110a2c9b50fSJeremy L Thompson     PetscInt num_indices, *indices;
111a2c9b50fSJeremy L Thompson     PetscInt field_offsets[17]; // max number of fields plus 1
112*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexGetClosureIndices(dm, section, section, c, PETSC_TRUE, &num_indices, &indices, field_offsets, NULL));
113a2c9b50fSJeremy L Thompson     if (height > 0) {
114a2c9b50fSJeremy L Thompson       PetscInt num_cells_support, num_faces, start = -1;
115a2c9b50fSJeremy L Thompson       const PetscInt *orients, *faces, *cells;
116*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetSupport(dm, c, &cells));
117*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetSupportSize(dm, c, &num_cells_support));
118*5f80ce2aSJacob Faibussowitsch       PetscCheck(num_cells_support == 1,PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Expected one cell in support of exterior face, but got %" PetscInt_FMT " cells", num_cells_support);
119*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetCone(dm, cells[0], &faces));
120*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetConeSize(dm, cells[0], &num_faces));
121a2c9b50fSJeremy L Thompson       for (PetscInt i=0; i<num_faces; i++) {if (faces[i] == c) start = i;}
122*5f80ce2aSJacob Faibussowitsch       PetscCheck(start >= 0,PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Could not find face %" PetscInt_FMT " in cone of its support", c);
123*5f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetConeOrientation(dm, cells[0], &orients));
124a2c9b50fSJeremy L Thompson       if (orients[start] < 0) flip = PETSC_TRUE;
125a2c9b50fSJeremy L Thompson     }
126a2c9b50fSJeremy L Thompson 
127a2c9b50fSJeremy L Thompson     for (PetscInt i = 0; i < *cell_size; i++) {
128a2c9b50fSJeremy L Thompson       PetscInt ii = i;
129a2c9b50fSJeremy L Thompson       if (flip) {
130a2c9b50fSJeremy L Thompson         if (*cell_size == P) ii = *cell_size - 1 - i;
131a2c9b50fSJeremy L Thompson         else if (*cell_size == P*P) {
132a2c9b50fSJeremy L Thompson           PetscInt row = i / P, col = i % P;
133a2c9b50fSJeremy L Thompson           ii = row + col * P;
13498921bdaSJacob Faibussowitsch         } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for flipping point with cell size %D != P (%D) or P^2", *cell_size, P);
135a2c9b50fSJeremy L Thompson       }
136a2c9b50fSJeremy L Thompson       // Essential boundary conditions are encoded as -(loc+1), but we don't care so we decode.
137a2c9b50fSJeremy L Thompson       PetscInt loc = indices[field_offsets[dm_field] + ii*(*num_comp)];
138a2c9b50fSJeremy L Thompson       restr_indices[cell_offset++] = loc >= 0 ? loc : -(loc + 1);
139a2c9b50fSJeremy L Thompson     }
140*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexRestoreClosureIndices(dm, section, section, c, PETSC_TRUE, &num_indices, &indices, field_offsets, NULL));
141a2c9b50fSJeremy L Thompson   }
142*5f80ce2aSJacob Faibussowitsch   PetscCheck(cell_offset == restr_size,PETSC_COMM_SELF, PETSC_ERR_SUP, "Shape mismatch, offsets array of shape (%D, %D) initialized for %D nodes", *num_cells, (*cell_size), cell_offset);
143*5f80ce2aSJacob Faibussowitsch   if (iter_is) CHKERRQ(ISRestoreIndices(iter_is, &iter_indices));
144*5f80ce2aSJacob Faibussowitsch   CHKERRQ(ISDestroy(&iter_is));
145a2c9b50fSJeremy L Thompson 
146a2c9b50fSJeremy L Thompson   *offsets = restr_indices;
147*5f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSectionGetStorageSize(section, l_size));
148a2c9b50fSJeremy L Thompson   PetscFunctionReturn(0);
149a2c9b50fSJeremy L Thompson }
150a2c9b50fSJeremy L Thompson 
151a2c9b50fSJeremy L Thompson #if defined(PETSC_HAVE_LIBCEED)
152f918ec44SMatthew G. Knepley #include <petscdmplexceed.h>
153f918ec44SMatthew G. Knepley 
154a2c9b50fSJeremy L Thompson /*@C
155a2c9b50fSJeremy L Thompson   DMPlexGetCeedRestriction - Define the libCEED map from the local vector (Lvector) to the cells (Evector)
156a2c9b50fSJeremy L Thompson 
157a2c9b50fSJeremy L Thompson   Input Parameters:
158a2c9b50fSJeremy L Thompson   dm - The DMPlex object
159a2c9b50fSJeremy L Thompson   domain_label - label for DMPlex domain, or NULL for the whole domain
160a2c9b50fSJeremy L Thompson   label_value - Stratum value
161a2c9b50fSJeremy L Thompson   height - Height of target cells in DMPlex topology
162a2c9b50fSJeremy L Thompson   dm_field - Index of DMPlex field
163a2c9b50fSJeremy L Thompson 
164a2c9b50fSJeremy L Thompson   Output Parameters:
165a2c9b50fSJeremy L Thompson   ERestrict - libCEED restriction from local vector to to the cells
166a2c9b50fSJeremy L Thompson 
167a2c9b50fSJeremy L Thompson   Level: developer
168a2c9b50fSJeremy L Thompson @*/
169a2c9b50fSJeremy L Thompson PetscErrorCode DMPlexGetCeedRestriction(DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field, CeedElemRestriction *ERestrict)
170f918ec44SMatthew G. Knepley {
171f918ec44SMatthew G. Knepley   PetscFunctionBeginUser;
172f918ec44SMatthew G. Knepley   PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
173f918ec44SMatthew G. Knepley   PetscValidPointer(ERestrict, 2);
174f918ec44SMatthew G. Knepley   if (!dm->ceedERestrict) {
175a2c9b50fSJeremy L Thompson     PetscInt     num_cells, cell_size, num_comp, lvec_size, *restr_indices;
176a2c9b50fSJeremy L Thompson     CeedElemRestriction elem_restr;
177f918ec44SMatthew G. Knepley     Ceed         ceed;
178f918ec44SMatthew G. Knepley 
179*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexGetLocalOffsets(dm, domain_label, label_value, height, dm_field, &num_cells, &cell_size, &num_comp, &lvec_size, &restr_indices));
180*5f80ce2aSJacob Faibussowitsch     CHKERRQ(DMGetCeed(dm, &ceed));
181*5f80ce2aSJacob Faibussowitsch     CHKERRQ_CEED(CeedElemRestrictionCreate(ceed, num_cells, cell_size, num_comp, 1, lvec_size, CEED_MEM_HOST, CEED_COPY_VALUES, restr_indices, &elem_restr));
182*5f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscFree(restr_indices));
183a2c9b50fSJeremy L Thompson     dm->ceedERestrict = elem_restr;
184f918ec44SMatthew G. Knepley   }
185f918ec44SMatthew G. Knepley   *ERestrict = dm->ceedERestrict;
186f918ec44SMatthew G. Knepley   PetscFunctionReturn(0);
187f918ec44SMatthew G. Knepley }
188f918ec44SMatthew G. Knepley 
189f918ec44SMatthew G. Knepley #endif
190