1f918ec44SMatthew G. Knepley #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 2f918ec44SMatthew G. Knepley 3*a2c9b50fSJeremy L Thompson /*@C 4*a2c9b50fSJeremy L Thompson DMPlexGetLocalOffsets - Allocate and populate array of local offsets. 5*a2c9b50fSJeremy L Thompson 6*a2c9b50fSJeremy L Thompson Input Parameters: 7*a2c9b50fSJeremy L Thompson dm - The DMPlex object 8*a2c9b50fSJeremy L Thompson domain_label - label for DMPlex domain, or NULL for whole domain 9*a2c9b50fSJeremy L Thompson label_value - Stratum value 10*a2c9b50fSJeremy L Thompson height - Height of target cells in DMPlex topology 11*a2c9b50fSJeremy L Thompson dm_field - Index of DMPlex field 12*a2c9b50fSJeremy L Thompson 13*a2c9b50fSJeremy L Thompson Output Parameters: 14*a2c9b50fSJeremy L Thompson num_cells - Number of local cells 15*a2c9b50fSJeremy L Thompson cell_size - Size of each cell, given by cell_size * num_comp = num_dof 16*a2c9b50fSJeremy L Thompson num_comp - Number of components per dof 17*a2c9b50fSJeremy L Thompson l_size - Size of local vector 18*a2c9b50fSJeremy L Thompson offsets - Allocated offsets array for cells 19*a2c9b50fSJeremy L Thompson 20*a2c9b50fSJeremy L Thompson Notes: Allocate and populate array of shape [num_cells, cell_size] defining offsets for each value (cell, node) for local vector of the DMPlex field. All offsets are in the range [0, l_size - 1]. Caller is responsible for freeing the offsets array using PetscFree(). 21*a2c9b50fSJeremy L Thompson 22*a2c9b50fSJeremy L Thompson Level: developer 23*a2c9b50fSJeremy L Thompson 24*a2c9b50fSJeremy L Thompson .seealso: DMPlexGetClosureIndices(), DMPlexSetClosurePermutationTensor(), DMPlexGetCeedRestriction() 25*a2c9b50fSJeremy L Thompson @*/ 26*a2c9b50fSJeremy L Thompson PetscErrorCode DMPlexGetLocalOffsets(DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field, PetscInt *num_cells, PetscInt *cell_size, PetscInt *num_comp, PetscInt *l_size, PetscInt **offsets) 27*a2c9b50fSJeremy L Thompson { 28*a2c9b50fSJeremy L Thompson PetscErrorCode ierr; 29*a2c9b50fSJeremy L Thompson 30*a2c9b50fSJeremy L Thompson PetscFunctionBeginUser; 31*a2c9b50fSJeremy L Thompson PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 32*a2c9b50fSJeremy L Thompson PetscDS ds = NULL; 33*a2c9b50fSJeremy L Thompson PetscFE fe; 34*a2c9b50fSJeremy L Thompson PetscSection section; 35*a2c9b50fSJeremy L Thompson PetscInt dim; 36*a2c9b50fSJeremy L Thompson PetscInt *restr_indices; 37*a2c9b50fSJeremy L Thompson const PetscInt *iter_indices; 38*a2c9b50fSJeremy L Thompson IS iter_is; 39*a2c9b50fSJeremy L Thompson 40*a2c9b50fSJeremy L Thompson ierr = DMGetLocalSection(dm, §ion);CHKERRQ(ierr); 41*a2c9b50fSJeremy L Thompson if (domain_label) { 42*a2c9b50fSJeremy L Thompson ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 43*a2c9b50fSJeremy L Thompson ierr = DMGetFirstLabelEntry_Internal(dm, dm, domain_label, 1, &label_value, dim, NULL, &ds);CHKERRQ(ierr); 44*a2c9b50fSJeremy L Thompson } 45*a2c9b50fSJeremy L Thompson 46*a2c9b50fSJeremy L Thompson // Translate dm_field to ds_field 47*a2c9b50fSJeremy L Thompson PetscInt ds_field = -1; 48*a2c9b50fSJeremy L Thompson for (PetscInt i=0; i<dm->Nds; i++) { 49*a2c9b50fSJeremy L Thompson if (!domain_label || domain_label == dm->probs[i].label) { 50*a2c9b50fSJeremy L Thompson ds = dm->probs[i].ds; 51*a2c9b50fSJeremy L Thompson } 52*a2c9b50fSJeremy L Thompson if (ds == dm->probs[i].ds) { 53*a2c9b50fSJeremy L Thompson const PetscInt *arr; 54*a2c9b50fSJeremy L Thompson PetscInt nf; 55*a2c9b50fSJeremy L Thompson IS is = dm->probs[i].fields; 56*a2c9b50fSJeremy L Thompson ierr = ISGetIndices(is, &arr);CHKERRQ(ierr); 57*a2c9b50fSJeremy L Thompson ierr = ISGetSize(is, &nf);CHKERRQ(ierr); 58*a2c9b50fSJeremy L Thompson for (PetscInt j=0; j<nf; j++) { 59*a2c9b50fSJeremy L Thompson if (dm_field == arr[j]) { 60*a2c9b50fSJeremy L Thompson ds_field = j; 61*a2c9b50fSJeremy L Thompson break; 62*a2c9b50fSJeremy L Thompson } 63*a2c9b50fSJeremy L Thompson } 64*a2c9b50fSJeremy L Thompson ierr = ISRestoreIndices(is, &arr);CHKERRQ(ierr); 65*a2c9b50fSJeremy L Thompson } 66*a2c9b50fSJeremy L Thompson } 67*a2c9b50fSJeremy L Thompson if (ds_field == -1) SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Could not find dm_field %D in DS", dm_field); 68*a2c9b50fSJeremy L Thompson 69*a2c9b50fSJeremy L Thompson { 70*a2c9b50fSJeremy L Thompson PetscInt depth; 71*a2c9b50fSJeremy L Thompson DMLabel depth_label; 72*a2c9b50fSJeremy L Thompson IS depth_is; 73*a2c9b50fSJeremy L Thompson ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr); 74*a2c9b50fSJeremy L Thompson ierr = DMPlexGetDepthLabel(dm, &depth_label);CHKERRQ(ierr); 75*a2c9b50fSJeremy L Thompson ierr = DMLabelGetStratumIS(depth_label, depth - height, &depth_is);CHKERRQ(ierr); 76*a2c9b50fSJeremy L Thompson if (domain_label) { 77*a2c9b50fSJeremy L Thompson IS domain_is; 78*a2c9b50fSJeremy L Thompson ierr = DMLabelGetStratumIS(domain_label, label_value, &domain_is);CHKERRQ(ierr); 79*a2c9b50fSJeremy L Thompson if (domain_is) { // domainIS is non-empty 80*a2c9b50fSJeremy L Thompson ierr = ISIntersect(depth_is, domain_is, &iter_is);CHKERRQ(ierr); 81*a2c9b50fSJeremy L Thompson ierr = ISDestroy(&domain_is);CHKERRQ(ierr); 82*a2c9b50fSJeremy L Thompson } else { // domainIS is NULL (empty) 83*a2c9b50fSJeremy L Thompson iter_is = NULL; 84*a2c9b50fSJeremy L Thompson } 85*a2c9b50fSJeremy L Thompson ierr = ISDestroy(&depth_is);CHKERRQ(ierr); 86*a2c9b50fSJeremy L Thompson } else { 87*a2c9b50fSJeremy L Thompson iter_is = depth_is; 88*a2c9b50fSJeremy L Thompson } 89*a2c9b50fSJeremy L Thompson if (iter_is) { 90*a2c9b50fSJeremy L Thompson ierr = ISGetLocalSize(iter_is, num_cells);CHKERRQ(ierr); 91*a2c9b50fSJeremy L Thompson ierr = ISGetIndices(iter_is, &iter_indices);CHKERRQ(ierr); 92*a2c9b50fSJeremy L Thompson } else { 93*a2c9b50fSJeremy L Thompson *num_cells = 0; 94*a2c9b50fSJeremy L Thompson iter_indices = NULL; 95*a2c9b50fSJeremy L Thompson } 96*a2c9b50fSJeremy L Thompson } 97*a2c9b50fSJeremy L Thompson 98*a2c9b50fSJeremy L Thompson { 99*a2c9b50fSJeremy L Thompson PetscDualSpace dual_space; 100*a2c9b50fSJeremy L Thompson PetscInt num_dual_basis_vectors; 101*a2c9b50fSJeremy L Thompson ierr = PetscDSGetDiscretization(ds, ds_field, (PetscObject*)&fe);CHKERRQ(ierr); 102*a2c9b50fSJeremy L Thompson ierr = PetscFEGetHeightSubspace(fe, height, &fe);CHKERRQ(ierr); 103*a2c9b50fSJeremy L Thompson ierr = PetscFEGetDualSpace(fe, &dual_space);CHKERRQ(ierr); 104*a2c9b50fSJeremy L Thompson ierr = PetscDualSpaceGetDimension(dual_space, &num_dual_basis_vectors);CHKERRQ(ierr); 105*a2c9b50fSJeremy L Thompson ierr = PetscDualSpaceGetNumComponents(dual_space, num_comp);CHKERRQ(ierr); 106*a2c9b50fSJeremy L Thompson if (num_dual_basis_vectors % *num_comp != 0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for number of dual basis vectors %D not divisible by %D components", num_dual_basis_vectors, *num_comp); 107*a2c9b50fSJeremy L Thompson *cell_size = num_dual_basis_vectors / *num_comp; 108*a2c9b50fSJeremy L Thompson } 109*a2c9b50fSJeremy L Thompson PetscInt restr_size = (*num_cells)*(*cell_size); 110*a2c9b50fSJeremy L Thompson ierr = PetscMalloc1(restr_size, &restr_indices);CHKERRQ(ierr); 111*a2c9b50fSJeremy L Thompson PetscInt cell_offset = 0; 112*a2c9b50fSJeremy L Thompson 113*a2c9b50fSJeremy L Thompson PetscInt P = (PetscInt) pow(*cell_size, 1.0 / (dim - height)); 114*a2c9b50fSJeremy L Thompson for (PetscInt p = 0; p < *num_cells; p++) { 115*a2c9b50fSJeremy L Thompson PetscBool flip = PETSC_FALSE; 116*a2c9b50fSJeremy L Thompson PetscInt c = iter_indices[p]; 117*a2c9b50fSJeremy L Thompson PetscInt num_indices, *indices; 118*a2c9b50fSJeremy L Thompson PetscInt field_offsets[17]; // max number of fields plus 1 119*a2c9b50fSJeremy L Thompson ierr = DMPlexGetClosureIndices(dm, section, section, c, PETSC_TRUE, &num_indices, &indices, field_offsets, NULL);CHKERRQ(ierr); 120*a2c9b50fSJeremy L Thompson if (height > 0) { 121*a2c9b50fSJeremy L Thompson PetscInt num_cells_support, num_faces, start = -1; 122*a2c9b50fSJeremy L Thompson const PetscInt *orients, *faces, *cells; 123*a2c9b50fSJeremy L Thompson ierr = DMPlexGetSupport(dm, c, &cells);CHKERRQ(ierr); 124*a2c9b50fSJeremy L Thompson ierr = DMPlexGetSupportSize(dm, c, &num_cells_support);CHKERRQ(ierr); 125*a2c9b50fSJeremy L Thompson if (num_cells_support != 1) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Expected one cell in support of exterior face, but got %D cells", num_cells_support); 126*a2c9b50fSJeremy L Thompson ierr = DMPlexGetCone(dm, cells[0], &faces);CHKERRQ(ierr); 127*a2c9b50fSJeremy L Thompson ierr = DMPlexGetConeSize(dm, cells[0], &num_faces);CHKERRQ(ierr); 128*a2c9b50fSJeremy L Thompson for (PetscInt i=0; i<num_faces; i++) {if (faces[i] == c) start = i;} 129*a2c9b50fSJeremy L Thompson if (start < 0) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Could not find face %D in cone of its support", c); 130*a2c9b50fSJeremy L Thompson ierr = DMPlexGetConeOrientation(dm, cells[0], &orients);CHKERRQ(ierr); 131*a2c9b50fSJeremy L Thompson if (orients[start] < 0) flip = PETSC_TRUE; 132*a2c9b50fSJeremy L Thompson } 133*a2c9b50fSJeremy L Thompson 134*a2c9b50fSJeremy L Thompson for (PetscInt i = 0; i < *cell_size; i++) { 135*a2c9b50fSJeremy L Thompson PetscInt ii = i; 136*a2c9b50fSJeremy L Thompson if (flip) { 137*a2c9b50fSJeremy L Thompson if (*cell_size == P) ii = *cell_size - 1 - i; 138*a2c9b50fSJeremy L Thompson else if (*cell_size == P*P) { 139*a2c9b50fSJeremy L Thompson PetscInt row = i / P, col = i % P; 140*a2c9b50fSJeremy L Thompson ii = row + col * P; 141*a2c9b50fSJeremy L Thompson } else SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for flipping point with cell size %D != P (%D) or P^2", *cell_size, P); 142*a2c9b50fSJeremy L Thompson } 143*a2c9b50fSJeremy L Thompson // Essential boundary conditions are encoded as -(loc+1), but we don't care so we decode. 144*a2c9b50fSJeremy L Thompson PetscInt loc = indices[field_offsets[dm_field] + ii*(*num_comp)]; 145*a2c9b50fSJeremy L Thompson restr_indices[cell_offset++] = loc >= 0 ? loc : -(loc + 1); 146*a2c9b50fSJeremy L Thompson } 147*a2c9b50fSJeremy L Thompson ierr = DMPlexRestoreClosureIndices(dm, section, section, c, PETSC_TRUE, &num_indices, &indices, field_offsets, NULL);CHKERRQ(ierr); 148*a2c9b50fSJeremy L Thompson } 149*a2c9b50fSJeremy L Thompson if (cell_offset != restr_size) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_SUP, "Shape mismatch, offsets array of shape (%D, %D) initialized for %D nodes", *num_cells, (*cell_size), cell_offset); 150*a2c9b50fSJeremy L Thompson if (iter_is) { ierr = ISRestoreIndices(iter_is, &iter_indices);CHKERRQ(ierr); } 151*a2c9b50fSJeremy L Thompson ierr = ISDestroy(&iter_is);CHKERRQ(ierr); 152*a2c9b50fSJeremy L Thompson 153*a2c9b50fSJeremy L Thompson *offsets = restr_indices; 154*a2c9b50fSJeremy L Thompson ierr = PetscSectionGetStorageSize(section, l_size);CHKERRQ(ierr); 155*a2c9b50fSJeremy L Thompson PetscFunctionReturn(0); 156*a2c9b50fSJeremy L Thompson } 157*a2c9b50fSJeremy L Thompson 158*a2c9b50fSJeremy L Thompson #if defined(PETSC_HAVE_LIBCEED) 159f918ec44SMatthew G. Knepley #include <petscdmplexceed.h> 160f918ec44SMatthew G. Knepley 161*a2c9b50fSJeremy L Thompson /*@C 162*a2c9b50fSJeremy L Thompson DMPlexGetCeedRestriction - Define the libCEED map from the local vector (Lvector) to the cells (Evector) 163*a2c9b50fSJeremy L Thompson 164*a2c9b50fSJeremy L Thompson Input Parameters: 165*a2c9b50fSJeremy L Thompson dm - The DMPlex object 166*a2c9b50fSJeremy L Thompson domain_label - label for DMPlex domain, or NULL for the whole domain 167*a2c9b50fSJeremy L Thompson label_value - Stratum value 168*a2c9b50fSJeremy L Thompson height - Height of target cells in DMPlex topology 169*a2c9b50fSJeremy L Thompson dm_field - Index of DMPlex field 170*a2c9b50fSJeremy L Thompson 171*a2c9b50fSJeremy L Thompson Output Parameters: 172*a2c9b50fSJeremy L Thompson ERestrict - libCEED restriction from local vector to to the cells 173*a2c9b50fSJeremy L Thompson 174*a2c9b50fSJeremy L Thompson Level: developer 175*a2c9b50fSJeremy L Thompson @*/ 176*a2c9b50fSJeremy L Thompson PetscErrorCode DMPlexGetCeedRestriction(DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field, CeedElemRestriction *ERestrict) 177f918ec44SMatthew G. Knepley { 178f918ec44SMatthew G. Knepley PetscErrorCode ierr; 179f918ec44SMatthew G. Knepley 180f918ec44SMatthew G. Knepley PetscFunctionBeginUser; 181f918ec44SMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 182f918ec44SMatthew G. Knepley PetscValidPointer(ERestrict, 2); 183f918ec44SMatthew G. Knepley if (!dm->ceedERestrict) { 184*a2c9b50fSJeremy L Thompson PetscInt num_cells, cell_size, num_comp, lvec_size, *restr_indices; 185*a2c9b50fSJeremy L Thompson CeedElemRestriction elem_restr; 186f918ec44SMatthew G. Knepley Ceed ceed; 187f918ec44SMatthew G. Knepley 188*a2c9b50fSJeremy L Thompson ierr = DMPlexGetLocalOffsets(dm, domain_label, label_value, height, dm_field, &num_cells, &cell_size, &num_comp, &lvec_size, &restr_indices);CHKERRQ(ierr); 189f918ec44SMatthew G. Knepley 190f918ec44SMatthew G. Knepley ierr = DMGetCeed(dm, &ceed);CHKERRQ(ierr); 191*a2c9b50fSJeremy L Thompson ierr = CeedElemRestrictionCreate(ceed, num_cells, cell_size, num_comp, 1, lvec_size, CEED_MEM_HOST, CEED_COPY_VALUES, restr_indices, &elem_restr);CHKERRQ_CEED(ierr); 192*a2c9b50fSJeremy L Thompson ierr = PetscFree(restr_indices);CHKERRQ(ierr); 193*a2c9b50fSJeremy L Thompson dm->ceedERestrict = elem_restr; 194f918ec44SMatthew G. Knepley } 195f918ec44SMatthew G. Knepley *ERestrict = dm->ceedERestrict; 196f918ec44SMatthew G. Knepley PetscFunctionReturn(0); 197f918ec44SMatthew G. Knepley } 198f918ec44SMatthew G. Knepley 199f918ec44SMatthew G. Knepley #endif 200