1af0996ceSBarry Smith #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 2da97024aSMatthew G. Knepley #include <petscsf.h> 3cb1e1211SMatthew G Knepley 4af0996ceSBarry Smith #include <petsc/private/petscfeimpl.h> 5af0996ceSBarry Smith #include <petsc/private/petscfvimpl.h> 6a0845e3aSMatthew G. Knepley 7cb1e1211SMatthew G Knepley #undef __FUNCT__ 8cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexGetScale" 9cb1e1211SMatthew G Knepley PetscErrorCode DMPlexGetScale(DM dm, PetscUnit unit, PetscReal *scale) 10cb1e1211SMatthew G Knepley { 11cb1e1211SMatthew G Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 12cb1e1211SMatthew G Knepley 13cb1e1211SMatthew G Knepley PetscFunctionBegin; 14cb1e1211SMatthew G Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 15cb1e1211SMatthew G Knepley PetscValidPointer(scale, 3); 16cb1e1211SMatthew G Knepley *scale = mesh->scale[unit]; 17cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 18cb1e1211SMatthew G Knepley } 19cb1e1211SMatthew G Knepley 20cb1e1211SMatthew G Knepley #undef __FUNCT__ 21cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexSetScale" 22cb1e1211SMatthew G Knepley PetscErrorCode DMPlexSetScale(DM dm, PetscUnit unit, PetscReal scale) 23cb1e1211SMatthew G Knepley { 24cb1e1211SMatthew G Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 25cb1e1211SMatthew G Knepley 26cb1e1211SMatthew G Knepley PetscFunctionBegin; 27cb1e1211SMatthew G Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 28cb1e1211SMatthew G Knepley mesh->scale[unit] = scale; 29cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 30cb1e1211SMatthew G Knepley } 31cb1e1211SMatthew G Knepley 32cb1e1211SMatthew G Knepley PETSC_STATIC_INLINE PetscInt epsilon(PetscInt i, PetscInt j, PetscInt k) 33cb1e1211SMatthew G Knepley { 34cb1e1211SMatthew G Knepley switch (i) { 35cb1e1211SMatthew G Knepley case 0: 36cb1e1211SMatthew G Knepley switch (j) { 37cb1e1211SMatthew G Knepley case 0: return 0; 38cb1e1211SMatthew G Knepley case 1: 39cb1e1211SMatthew G Knepley switch (k) { 40cb1e1211SMatthew G Knepley case 0: return 0; 41cb1e1211SMatthew G Knepley case 1: return 0; 42cb1e1211SMatthew G Knepley case 2: return 1; 43cb1e1211SMatthew G Knepley } 44cb1e1211SMatthew G Knepley case 2: 45cb1e1211SMatthew G Knepley switch (k) { 46cb1e1211SMatthew G Knepley case 0: return 0; 47cb1e1211SMatthew G Knepley case 1: return -1; 48cb1e1211SMatthew G Knepley case 2: return 0; 49cb1e1211SMatthew G Knepley } 50cb1e1211SMatthew G Knepley } 51cb1e1211SMatthew G Knepley case 1: 52cb1e1211SMatthew G Knepley switch (j) { 53cb1e1211SMatthew G Knepley case 0: 54cb1e1211SMatthew G Knepley switch (k) { 55cb1e1211SMatthew G Knepley case 0: return 0; 56cb1e1211SMatthew G Knepley case 1: return 0; 57cb1e1211SMatthew G Knepley case 2: return -1; 58cb1e1211SMatthew G Knepley } 59cb1e1211SMatthew G Knepley case 1: return 0; 60cb1e1211SMatthew G Knepley case 2: 61cb1e1211SMatthew G Knepley switch (k) { 62cb1e1211SMatthew G Knepley case 0: return 1; 63cb1e1211SMatthew G Knepley case 1: return 0; 64cb1e1211SMatthew G Knepley case 2: return 0; 65cb1e1211SMatthew G Knepley } 66cb1e1211SMatthew G Knepley } 67cb1e1211SMatthew G Knepley case 2: 68cb1e1211SMatthew G Knepley switch (j) { 69cb1e1211SMatthew G Knepley case 0: 70cb1e1211SMatthew G Knepley switch (k) { 71cb1e1211SMatthew G Knepley case 0: return 0; 72cb1e1211SMatthew G Knepley case 1: return 1; 73cb1e1211SMatthew G Knepley case 2: return 0; 74cb1e1211SMatthew G Knepley } 75cb1e1211SMatthew G Knepley case 1: 76cb1e1211SMatthew G Knepley switch (k) { 77cb1e1211SMatthew G Knepley case 0: return -1; 78cb1e1211SMatthew G Knepley case 1: return 0; 79cb1e1211SMatthew G Knepley case 2: return 0; 80cb1e1211SMatthew G Knepley } 81cb1e1211SMatthew G Knepley case 2: return 0; 82cb1e1211SMatthew G Knepley } 83cb1e1211SMatthew G Knepley } 84cb1e1211SMatthew G Knepley return 0; 85cb1e1211SMatthew G Knepley } 86cb1e1211SMatthew G Knepley 87cb1e1211SMatthew G Knepley #undef __FUNCT__ 88026175e5SToby Isaac #define __FUNCT__ "DMPlexProjectRigidBody" 89ad917190SMatthew G. Knepley static PetscErrorCode DMPlexProjectRigidBody(PetscInt dim, const PetscReal X[], PetscInt Nf, PetscScalar *mode, void *ctx) 90026175e5SToby Isaac { 91026175e5SToby Isaac PetscInt *ctxInt = (PetscInt *) ctx; 92ad917190SMatthew G. Knepley PetscInt dim2 = ctxInt[0]; 93026175e5SToby Isaac PetscInt d = ctxInt[1]; 94026175e5SToby Isaac PetscInt i, j, k = dim > 2 ? d - dim : d; 95026175e5SToby Isaac 96ad917190SMatthew G. Knepley PetscFunctionBegin; 97ad917190SMatthew G. Knepley if (dim != dim2) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Input dimension %d does not match context dimension %d", dim, dim2); 98026175e5SToby Isaac for (i = 0; i < dim; i++) mode[i] = 0.; 99026175e5SToby Isaac if (d < dim) { 100026175e5SToby Isaac mode[d] = 1.; 101ad917190SMatthew G. Knepley } else { 102026175e5SToby Isaac for (i = 0; i < dim; i++) { 103026175e5SToby Isaac for (j = 0; j < dim; j++) { 104026175e5SToby Isaac mode[j] += epsilon(i, j, k)*X[i]; 105026175e5SToby Isaac } 106026175e5SToby Isaac } 107026175e5SToby Isaac } 108ad917190SMatthew G. Knepley PetscFunctionReturn(0); 109026175e5SToby Isaac } 110026175e5SToby Isaac 111026175e5SToby Isaac #undef __FUNCT__ 112cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexCreateRigidBody" 113cb1e1211SMatthew G Knepley /*@C 114026175e5SToby Isaac DMPlexCreateRigidBody - for the default global section, create rigid body modes from coordinates 115cb1e1211SMatthew G Knepley 116cb1e1211SMatthew G Knepley Collective on DM 117cb1e1211SMatthew G Knepley 118cb1e1211SMatthew G Knepley Input Arguments: 119026175e5SToby Isaac . dm - the DM 120cb1e1211SMatthew G Knepley 121cb1e1211SMatthew G Knepley Output Argument: 122cb1e1211SMatthew G Knepley . sp - the null space 123cb1e1211SMatthew G Knepley 124cb1e1211SMatthew G Knepley Note: This is necessary to take account of Dirichlet conditions on the displacements 125cb1e1211SMatthew G Knepley 126cb1e1211SMatthew G Knepley Level: advanced 127cb1e1211SMatthew G Knepley 128cb1e1211SMatthew G Knepley .seealso: MatNullSpaceCreate() 129cb1e1211SMatthew G Knepley @*/ 130026175e5SToby Isaac PetscErrorCode DMPlexCreateRigidBody(DM dm, MatNullSpace *sp) 131cb1e1211SMatthew G Knepley { 132cb1e1211SMatthew G Knepley MPI_Comm comm; 133026175e5SToby Isaac Vec mode[6]; 134026175e5SToby Isaac PetscSection section, globalSection; 135026175e5SToby Isaac PetscInt dim, n, m, d, i, j; 136cb1e1211SMatthew G Knepley PetscErrorCode ierr; 137cb1e1211SMatthew G Knepley 138cb1e1211SMatthew G Knepley PetscFunctionBegin; 139cb1e1211SMatthew G Knepley ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr); 140c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 141cb1e1211SMatthew G Knepley if (dim == 1) { 142cb1e1211SMatthew G Knepley ierr = MatNullSpaceCreate(comm, PETSC_TRUE, 0, NULL, sp);CHKERRQ(ierr); 143cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 144cb1e1211SMatthew G Knepley } 145026175e5SToby Isaac ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 146026175e5SToby Isaac ierr = DMGetDefaultGlobalSection(dm, &globalSection);CHKERRQ(ierr); 147cb1e1211SMatthew G Knepley ierr = PetscSectionGetConstrainedStorageSize(globalSection, &n);CHKERRQ(ierr); 148cb1e1211SMatthew G Knepley m = (dim*(dim+1))/2; 149cb1e1211SMatthew G Knepley ierr = VecCreate(comm, &mode[0]);CHKERRQ(ierr); 150cb1e1211SMatthew G Knepley ierr = VecSetSizes(mode[0], n, PETSC_DETERMINE);CHKERRQ(ierr); 151cb1e1211SMatthew G Knepley ierr = VecSetUp(mode[0]);CHKERRQ(ierr); 152cb1e1211SMatthew G Knepley for (i = 1; i < m; ++i) {ierr = VecDuplicate(mode[0], &mode[i]);CHKERRQ(ierr);} 153026175e5SToby Isaac for (d = 0; d < m; d++) { 154330485fdSToby Isaac PetscInt ctx[2]; 155026175e5SToby Isaac void *voidctx = (void *) (&ctx[0]); 156ad917190SMatthew G. Knepley PetscErrorCode (*func)(PetscInt, const PetscReal *, PetscInt, PetscScalar *, void *) = DMPlexProjectRigidBody; 157cb1e1211SMatthew G Knepley 158330485fdSToby Isaac ctx[0] = dim; 159330485fdSToby Isaac ctx[1] = d; 160026175e5SToby Isaac ierr = DMPlexProjectFunction(dm, &func, &voidctx, INSERT_VALUES, mode[d]);CHKERRQ(ierr); 161cb1e1211SMatthew G Knepley } 162cb1e1211SMatthew G Knepley for (i = 0; i < dim; ++i) {ierr = VecNormalize(mode[i], NULL);CHKERRQ(ierr);} 163cb1e1211SMatthew G Knepley /* Orthonormalize system */ 164cb1e1211SMatthew G Knepley for (i = dim; i < m; ++i) { 165cb1e1211SMatthew G Knepley PetscScalar dots[6]; 166cb1e1211SMatthew G Knepley 167cb1e1211SMatthew G Knepley ierr = VecMDot(mode[i], i, mode, dots);CHKERRQ(ierr); 168cb1e1211SMatthew G Knepley for (j = 0; j < i; ++j) dots[j] *= -1.0; 169cb1e1211SMatthew G Knepley ierr = VecMAXPY(mode[i], i, dots, mode);CHKERRQ(ierr); 170cb1e1211SMatthew G Knepley ierr = VecNormalize(mode[i], NULL);CHKERRQ(ierr); 171cb1e1211SMatthew G Knepley } 172cb1e1211SMatthew G Knepley ierr = MatNullSpaceCreate(comm, PETSC_FALSE, m, mode, sp);CHKERRQ(ierr); 173cb1e1211SMatthew G Knepley for (i = 0; i< m; ++i) {ierr = VecDestroy(&mode[i]);CHKERRQ(ierr);} 174cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 175cb1e1211SMatthew G Knepley } 176cb1e1211SMatthew G Knepley 177cb1e1211SMatthew G Knepley #undef __FUNCT__ 178b29cfa1cSToby Isaac #define __FUNCT__ "DMPlexSetMaxProjectionHeight" 179b29cfa1cSToby Isaac /*@ 180b29cfa1cSToby Isaac DMPlexSetMaxProjectionHeight - In DMPlexProjectXXXLocal() functions, the projected values of a basis function's dofs 181b29cfa1cSToby Isaac are computed by associating the basis function with one of the mesh points in its transitively-closed support, and 182b29cfa1cSToby Isaac evaluating the dual space basis of that point. A basis function is associated with the point in its 183b29cfa1cSToby Isaac transitively-closed support whose mesh height is highest (w.r.t. DAG height), but not greater than the maximum 184b29cfa1cSToby Isaac projection height, which is set with this function. By default, the maximum projection height is zero, which means 185b29cfa1cSToby Isaac that only mesh cells are used to project basis functions. A height of one, for example, evaluates a cell-interior 186b29cfa1cSToby Isaac basis functions using its cells dual space basis, but all other basis functions with the dual space basis of a face. 187b29cfa1cSToby Isaac 188b29cfa1cSToby Isaac Input Parameters: 189b29cfa1cSToby Isaac + dm - the DMPlex object 190b29cfa1cSToby Isaac - height - the maximum projection height >= 0 191b29cfa1cSToby Isaac 192b29cfa1cSToby Isaac Level: advanced 193b29cfa1cSToby Isaac 194048b7b1eSToby Isaac .seealso: DMPlexGetMaxProjectionHeight(), DMPlexProjectFunctionLocal(), DMPlexProjectFunctionLabelLocal() 195b29cfa1cSToby Isaac @*/ 196b29cfa1cSToby Isaac PetscErrorCode DMPlexSetMaxProjectionHeight(DM dm, PetscInt height) 197b29cfa1cSToby Isaac { 198b29cfa1cSToby Isaac DM_Plex *plex = (DM_Plex *) dm->data; 199b29cfa1cSToby Isaac 200b29cfa1cSToby Isaac PetscFunctionBegin; 201b29cfa1cSToby Isaac PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 202b29cfa1cSToby Isaac plex->maxProjectionHeight = height; 203b29cfa1cSToby Isaac PetscFunctionReturn(0); 204b29cfa1cSToby Isaac } 205b29cfa1cSToby Isaac 206b29cfa1cSToby Isaac #undef __FUNCT__ 207b29cfa1cSToby Isaac #define __FUNCT__ "DMPlexGetMaxProjectionHeight" 208b29cfa1cSToby Isaac /*@ 209b29cfa1cSToby Isaac DMPlexGetMaxProjectionHeight - Get the maximum height (w.r.t. DAG) of mesh points used to evaluate dual bases in 210b29cfa1cSToby Isaac DMPlexProjectXXXLocal() functions. 211b29cfa1cSToby Isaac 212b29cfa1cSToby Isaac Input Parameters: 213b29cfa1cSToby Isaac . dm - the DMPlex object 214b29cfa1cSToby Isaac 215b29cfa1cSToby Isaac Output Parameters: 216b29cfa1cSToby Isaac . height - the maximum projection height 217b29cfa1cSToby Isaac 218b29cfa1cSToby Isaac Level: intermediate 219b29cfa1cSToby Isaac 220048b7b1eSToby Isaac .seealso: DMPlexSetMaxProjectionHeight(), DMPlexProjectFunctionLocal(), DMPlexProjectFunctionLabelLocal() 221b29cfa1cSToby Isaac @*/ 222b29cfa1cSToby Isaac PetscErrorCode DMPlexGetMaxProjectionHeight(DM dm, PetscInt *height) 223b29cfa1cSToby Isaac { 224b29cfa1cSToby Isaac DM_Plex *plex = (DM_Plex *) dm->data; 225b29cfa1cSToby Isaac 226b29cfa1cSToby Isaac PetscFunctionBegin; 227b29cfa1cSToby Isaac PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 228b29cfa1cSToby Isaac *height = plex->maxProjectionHeight; 229b29cfa1cSToby Isaac PetscFunctionReturn(0); 230b29cfa1cSToby Isaac } 231b29cfa1cSToby Isaac 232b29cfa1cSToby Isaac #undef __FUNCT__ 233a18a7fb9SMatthew G. Knepley #define __FUNCT__ "DMPlexProjectFunctionLabelLocal" 234ad917190SMatthew G. Knepley PetscErrorCode DMPlexProjectFunctionLabelLocal(DM dm, DMLabel label, PetscInt numIds, const PetscInt ids[], PetscErrorCode (**funcs)(PetscInt, const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, InsertMode mode, Vec localX) 235a18a7fb9SMatthew G. Knepley { 2367d1dd11eSToby Isaac PetscDualSpace *sp, *cellsp; 237dda36da7SMatthew G. Knepley PetscInt *numComp; 238a18a7fb9SMatthew G. Knepley PetscSection section; 239a18a7fb9SMatthew G. Knepley PetscScalar *values; 240ad96f515SMatthew G. Knepley PetscBool *fieldActive; 241dda36da7SMatthew G. Knepley PetscInt numFields, dim, dimEmbed, spDim, totDim = 0, numValues, pStart, pEnd, cStart, cEnd, cEndInterior, f, d, v, i, comp, maxHeight, h; 242a18a7fb9SMatthew G. Knepley PetscErrorCode ierr; 243a18a7fb9SMatthew G. Knepley 244a18a7fb9SMatthew G. Knepley PetscFunctionBegin; 2459ac3fadcSMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 2469ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 2479ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 2489ac3fadcSMatthew G. Knepley if (cEnd <= cStart) PetscFunctionReturn(0); 249c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 2507a1a1bd4SToby Isaac ierr = DMGetCoordinateDim(dm, &dimEmbed);CHKERRQ(ierr); 251a18a7fb9SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 252a18a7fb9SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 253dda36da7SMatthew G. Knepley ierr = PetscMalloc2(numFields,&sp,numFields,&numComp);CHKERRQ(ierr); 2547d1dd11eSToby Isaac ierr = DMPlexGetMaxProjectionHeight(dm,&maxHeight);CHKERRQ(ierr); 2557d1dd11eSToby Isaac if (maxHeight < 0 || maxHeight > dim) {SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"maximum projection height %d not in [0, %d)\n", maxHeight,dim);} 2569ac3fadcSMatthew G. Knepley if (maxHeight > 0) {ierr = PetscMalloc1(numFields,&cellsp);CHKERRQ(ierr);} 2579ac3fadcSMatthew G. Knepley else {cellsp = sp;} 2587d1dd11eSToby Isaac for (h = 0; h <= maxHeight; h++) { 2597d1dd11eSToby Isaac ierr = DMPlexGetHeightStratum(dm, h, &pStart, &pEnd);CHKERRQ(ierr); 260fa5a0009SMatthew G. Knepley if (!h) {pStart = cStart; pEnd = cEnd;} 2617d1dd11eSToby Isaac if (pEnd <= pStart) continue; 2627d1dd11eSToby Isaac totDim = 0; 263a18a7fb9SMatthew G. Knepley for (f = 0; f < numFields; ++f) { 2649ac3fadcSMatthew G. Knepley PetscObject obj; 2659ac3fadcSMatthew G. Knepley PetscClassId id; 2669ac3fadcSMatthew G. Knepley 2679ac3fadcSMatthew G. Knepley ierr = DMGetField(dm, f, &obj);CHKERRQ(ierr); 2689ac3fadcSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 2699ac3fadcSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 2709ac3fadcSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 2719ac3fadcSMatthew G. Knepley 272dda36da7SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &numComp[f]);CHKERRQ(ierr); 2737d1dd11eSToby Isaac if (!h) { 274ee2838f6SToby Isaac ierr = PetscFEGetDualSpace(fe, &cellsp[f]);CHKERRQ(ierr); 2757d1dd11eSToby Isaac sp[f] = cellsp[f]; 2769ac3fadcSMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 2779ac3fadcSMatthew G. Knepley } else { 2787d1dd11eSToby Isaac ierr = PetscDualSpaceGetHeightSubspace(cellsp[f], h, &sp[f]);CHKERRQ(ierr); 2797d1dd11eSToby Isaac if (!sp[f]) continue; 2807d1dd11eSToby Isaac } 2819ac3fadcSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 2829ac3fadcSMatthew G. Knepley PetscFV fv = (PetscFV) obj; 2839ac3fadcSMatthew G. Knepley 284dda36da7SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &numComp[f]);CHKERRQ(ierr); 285302440fdSBarry Smith ierr = PetscFVGetDualSpace(fv, &sp[f]);CHKERRQ(ierr); 286e3e48f69SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 2879ac3fadcSMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", f); 288a18a7fb9SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 289dda36da7SMatthew G. Knepley totDim += spDim*numComp[f]; 290a18a7fb9SMatthew G. Knepley } 2917d1dd11eSToby Isaac ierr = DMPlexVecGetClosure(dm, section, localX, pStart, &numValues, NULL);CHKERRQ(ierr); 2927d1dd11eSToby Isaac if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section point closure size %d != dual space dimension %d", numValues, totDim); 293d374af2bSToby Isaac if (!totDim) continue; 294a18a7fb9SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 295ad96f515SMatthew G. Knepley ierr = DMGetWorkArray(dm, numFields, PETSC_BOOL, &fieldActive);CHKERRQ(ierr); 296ee2838f6SToby Isaac for (f = 0; f < numFields; ++f) fieldActive[f] = (funcs[f] && sp[f]) ? PETSC_TRUE : PETSC_FALSE; 297a18a7fb9SMatthew G. Knepley for (i = 0; i < numIds; ++i) { 298a18a7fb9SMatthew G. Knepley IS pointIS; 299a18a7fb9SMatthew G. Knepley const PetscInt *points; 300a18a7fb9SMatthew G. Knepley PetscInt n, p; 301a18a7fb9SMatthew G. Knepley 302a18a7fb9SMatthew G. Knepley ierr = DMLabelGetStratumIS(label, ids[i], &pointIS);CHKERRQ(ierr); 303a18a7fb9SMatthew G. Knepley ierr = ISGetLocalSize(pointIS, &n);CHKERRQ(ierr); 304a18a7fb9SMatthew G. Knepley ierr = ISGetIndices(pointIS, &points);CHKERRQ(ierr); 305a18a7fb9SMatthew G. Knepley for (p = 0; p < n; ++p) { 306a18a7fb9SMatthew G. Knepley const PetscInt point = points[p]; 307e1d0b1adSMatthew G. Knepley PetscFECellGeom geom; 308a18a7fb9SMatthew G. Knepley 3097d1dd11eSToby Isaac if ((point < pStart) || (point >= pEnd)) continue; 310e1d0b1adSMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, point, NULL, geom.v0, geom.J, NULL, &geom.detJ);CHKERRQ(ierr); 311ee2838f6SToby Isaac geom.dim = dim - h; 3127a1a1bd4SToby Isaac geom.dimEmbed = dimEmbed; 313a18a7fb9SMatthew G. Knepley for (f = 0, v = 0; f < numFields; ++f) { 314a18a7fb9SMatthew G. Knepley void * const ctx = ctxs ? ctxs[f] : NULL; 315bf3434eeSMatthew G. Knepley 3167d1dd11eSToby Isaac if (!sp[f]) continue; 317a18a7fb9SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 318a18a7fb9SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 319a18a7fb9SMatthew G. Knepley if (funcs[f]) { 320dda36da7SMatthew G. Knepley ierr = PetscDualSpaceApply(sp[f], d, &geom, numComp[f], funcs[f], ctx, &values[v]);CHKERRQ(ierr); 321a18a7fb9SMatthew G. Knepley } else { 322dda36da7SMatthew G. Knepley for (comp = 0; comp < numComp[f]; ++comp) values[v+comp] = 0.0; 323a18a7fb9SMatthew G. Knepley } 324dda36da7SMatthew G. Knepley v += numComp[f]; 325a18a7fb9SMatthew G. Knepley } 326a18a7fb9SMatthew G. Knepley } 327ad96f515SMatthew G. Knepley ierr = DMPlexVecSetFieldClosure_Internal(dm, section, localX, fieldActive, point, values, mode);CHKERRQ(ierr); 328a18a7fb9SMatthew G. Knepley } 329a18a7fb9SMatthew G. Knepley ierr = ISRestoreIndices(pointIS, &points);CHKERRQ(ierr); 330a18a7fb9SMatthew G. Knepley ierr = ISDestroy(&pointIS);CHKERRQ(ierr); 331a18a7fb9SMatthew G. Knepley } 3327d1dd11eSToby Isaac if (h) { 3337d1dd11eSToby Isaac for (f = 0; f < numFields; ++f) {ierr = PetscDualSpaceDestroy(&sp[f]);CHKERRQ(ierr);} 3347d1dd11eSToby Isaac } 3357d1dd11eSToby Isaac } 336a18a7fb9SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 337ad96f515SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numFields, PETSC_BOOL, &fieldActive);CHKERRQ(ierr); 3389ac3fadcSMatthew G. Knepley for (f = 0; f < numFields; ++f) {ierr = PetscDualSpaceDestroy(&sp[f]);CHKERRQ(ierr);} 339dda36da7SMatthew G. Knepley ierr = PetscFree2(sp, numComp);CHKERRQ(ierr); 3407d1dd11eSToby Isaac if (maxHeight > 0) { 3417d1dd11eSToby Isaac ierr = PetscFree(cellsp);CHKERRQ(ierr); 3427d1dd11eSToby Isaac } 343a18a7fb9SMatthew G. Knepley PetscFunctionReturn(0); 344a18a7fb9SMatthew G. Knepley } 345a18a7fb9SMatthew G. Knepley 346a18a7fb9SMatthew G. Knepley #undef __FUNCT__ 347cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexProjectFunctionLocal" 348ad917190SMatthew G. Knepley PetscErrorCode DMPlexProjectFunctionLocal(DM dm, PetscErrorCode (**funcs)(PetscInt, const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, InsertMode mode, Vec localX) 349cb1e1211SMatthew G Knepley { 3507d1dd11eSToby Isaac PetscDualSpace *sp, *cellsp; 35115496722SMatthew G. Knepley PetscInt *numComp; 35272f94c41SMatthew G. Knepley PetscSection section; 35372f94c41SMatthew G. Knepley PetscScalar *values; 354b793a5ffSMatthew G. Knepley PetscInt Nf, dim, dimEmbed, spDim, totDim = 0, numValues, pStart, pEnd, p, cStart, cEnd, cEndInterior, f, d, v, comp, h, maxHeight; 355cb1e1211SMatthew G Knepley PetscErrorCode ierr; 356cb1e1211SMatthew G Knepley 357cb1e1211SMatthew G Knepley PetscFunctionBegin; 3589ac3fadcSMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 3599ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 3609ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 3619ac3fadcSMatthew G. Knepley if (cEnd <= cStart) PetscFunctionReturn(0); 362cb1e1211SMatthew G Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 363b793a5ffSMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr); 364b793a5ffSMatthew G. Knepley ierr = PetscMalloc2(Nf, &sp, Nf, &numComp);CHKERRQ(ierr); 3657d1dd11eSToby Isaac ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 366ee2838f6SToby Isaac ierr = DMGetCoordinateDim(dm, &dimEmbed);CHKERRQ(ierr); 3677d1dd11eSToby Isaac ierr = DMPlexGetMaxProjectionHeight(dm,&maxHeight);CHKERRQ(ierr); 3687d1dd11eSToby Isaac if (maxHeight < 0 || maxHeight > dim) {SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"maximum projection height %d not in [0, %d)\n", maxHeight,dim);} 3697d1dd11eSToby Isaac if (maxHeight > 0) { 370b793a5ffSMatthew G. Knepley ierr = PetscMalloc1(Nf,&cellsp);CHKERRQ(ierr); 3717d1dd11eSToby Isaac } 372048b7b1eSToby Isaac else { 373048b7b1eSToby Isaac cellsp = sp; 374048b7b1eSToby Isaac } 3757d1dd11eSToby Isaac for (h = 0; h <= maxHeight; h++) { 3767d1dd11eSToby Isaac ierr = DMPlexGetHeightStratum(dm, h, &pStart, &pEnd);CHKERRQ(ierr); 377fa5a0009SMatthew G. Knepley if (!h) {pStart = cStart; pEnd = cEnd;} 378048b7b1eSToby Isaac if (pEnd <= pStart) continue; 3797d1dd11eSToby Isaac totDim = 0; 380b793a5ffSMatthew G. Knepley for (f = 0; f < Nf; ++f) { 38115496722SMatthew G. Knepley PetscObject obj; 38215496722SMatthew G. Knepley PetscClassId id; 3830f2d7e86SMatthew G. Knepley 38415496722SMatthew G. Knepley ierr = DMGetField(dm, f, &obj);CHKERRQ(ierr); 38515496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 38615496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 38715496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 38815496722SMatthew G. Knepley 38915496722SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &numComp[f]);CHKERRQ(ierr); 3907d1dd11eSToby Isaac if (!h) { 3917d1dd11eSToby Isaac ierr = PetscFEGetDualSpace(fe, &cellsp[f]);CHKERRQ(ierr); 3927d1dd11eSToby Isaac sp[f] = cellsp[f]; 39315496722SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 3947d1dd11eSToby Isaac } 3957d1dd11eSToby Isaac else { 3967d1dd11eSToby Isaac ierr = PetscDualSpaceGetHeightSubspace(cellsp[f], h, &sp[f]);CHKERRQ(ierr); 3977d1dd11eSToby Isaac if (!sp[f]) { 3987d1dd11eSToby Isaac continue; 3997d1dd11eSToby Isaac } 4007d1dd11eSToby Isaac } 40115496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 40215496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 40315496722SMatthew G. Knepley 404ee2838f6SToby Isaac if (h) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP, "Projection height > 0 not supported for finite volume"); 40515496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &numComp[f]);CHKERRQ(ierr); 406302440fdSBarry Smith ierr = PetscFVGetDualSpace(fv, &sp[f]);CHKERRQ(ierr); 407e3e48f69SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 40815496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", f); 40972f94c41SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 41015496722SMatthew G. Knepley totDim += spDim*numComp[f]; 411cb1e1211SMatthew G Knepley } 4127d1dd11eSToby Isaac ierr = DMPlexVecGetClosure(dm, section, localX, pStart, &numValues, NULL);CHKERRQ(ierr); 4137d1dd11eSToby Isaac if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section point closure size %d != dual space dimension %d", numValues, totDim); 414d374af2bSToby Isaac if (!totDim) continue; 41572f94c41SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 4167d1dd11eSToby Isaac for (p = pStart; p < pEnd; ++p) { 417e1d0b1adSMatthew G. Knepley PetscFECellGeom geom; 418cb1e1211SMatthew G Knepley 41931383a9bSToby Isaac ierr = DMPlexComputeCellGeometryFEM(dm, p, NULL, geom.v0, geom.J, NULL, &geom.detJ);CHKERRQ(ierr); 420910c25dcSToby Isaac geom.dim = dim - h; 4217a1a1bd4SToby Isaac geom.dimEmbed = dimEmbed; 422b793a5ffSMatthew G. Knepley for (f = 0, v = 0; f < Nf; ++f) { 423c110b1eeSGeoffrey Irving void * const ctx = ctxs ? ctxs[f] : NULL; 4240f2d7e86SMatthew G. Knepley 4257d1dd11eSToby Isaac if (!sp[f]) continue; 42672f94c41SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 42772f94c41SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 428120386c5SMatthew G. Knepley if (funcs[f]) { 429e1d0b1adSMatthew G. Knepley ierr = PetscDualSpaceApply(sp[f], d, &geom, numComp[f], funcs[f], ctx, &values[v]);CHKERRQ(ierr); 430120386c5SMatthew G. Knepley } else { 43115496722SMatthew G. Knepley for (comp = 0; comp < numComp[f]; ++comp) values[v+comp] = 0.0; 432120386c5SMatthew G. Knepley } 43315496722SMatthew G. Knepley v += numComp[f]; 434cb1e1211SMatthew G Knepley } 435cb1e1211SMatthew G Knepley } 4367d1dd11eSToby Isaac ierr = DMPlexVecSetClosure(dm, section, localX, p, values, mode);CHKERRQ(ierr); 437cb1e1211SMatthew G Knepley } 43872f94c41SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 439ee2838f6SToby Isaac if (h || !maxHeight) { 440b793a5ffSMatthew G. Knepley for (f = 0; f < Nf; f++) {ierr = PetscDualSpaceDestroy(&sp[f]);CHKERRQ(ierr);} 4417d1dd11eSToby Isaac } 4427d1dd11eSToby Isaac } 44315496722SMatthew G. Knepley ierr = PetscFree2(sp, numComp);CHKERRQ(ierr); 4447d1dd11eSToby Isaac if (maxHeight > 0) { 445b793a5ffSMatthew G. Knepley for (f = 0; f < Nf; f++) {ierr = PetscDualSpaceDestroy(&cellsp[f]);CHKERRQ(ierr);} 4467d1dd11eSToby Isaac ierr = PetscFree(cellsp);CHKERRQ(ierr); 4477d1dd11eSToby Isaac } 448cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 449cb1e1211SMatthew G Knepley } 450cb1e1211SMatthew G Knepley 451cb1e1211SMatthew G Knepley #undef __FUNCT__ 4528040c1f3SToby Isaac #define __FUNCT__ "DMPlexProjectFunction" 4538040c1f3SToby Isaac /*@C 4548040c1f3SToby Isaac DMPlexProjectFunction - This projects the given function into the function space provided. 4558040c1f3SToby Isaac 4568040c1f3SToby Isaac Input Parameters: 4578040c1f3SToby Isaac + dm - The DM 4588040c1f3SToby Isaac . funcs - The coordinate functions to evaluate, one per field 4598040c1f3SToby Isaac . ctxs - Optional array of contexts to pass to each coordinate function. ctxs itself may be null. 4608040c1f3SToby Isaac - mode - The insertion mode for values 4618040c1f3SToby Isaac 4628040c1f3SToby Isaac Output Parameter: 4638040c1f3SToby Isaac . X - vector 4648040c1f3SToby Isaac 465ad917190SMatthew G. Knepley Calling sequence of func: 466ad917190SMatthew G. Knepley $ func(PetscInt dim, const PetscReal x[], PetscInt Nf, PetscScalar u[], void *ctx); 467ad917190SMatthew G. Knepley 468ad917190SMatthew G. Knepley + dim - The spatial dimension 469ad917190SMatthew G. Knepley . x - The coordinates 470ad917190SMatthew G. Knepley . Nf - The number of fields 471ad917190SMatthew G. Knepley . u - The output field values 472ad917190SMatthew G. Knepley - ctx - optional user-defined function context 473ad917190SMatthew G. Knepley 4748040c1f3SToby Isaac Level: developer 4758040c1f3SToby Isaac 4768040c1f3SToby Isaac .seealso: DMPlexComputeL2Diff() 4778040c1f3SToby Isaac @*/ 478ad917190SMatthew G. Knepley PetscErrorCode DMPlexProjectFunction(DM dm, PetscErrorCode (**funcs)(PetscInt, const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, InsertMode mode, Vec X) 4798040c1f3SToby Isaac { 4808040c1f3SToby Isaac Vec localX; 4818040c1f3SToby Isaac PetscErrorCode ierr; 4828040c1f3SToby Isaac 4838040c1f3SToby Isaac PetscFunctionBegin; 4848040c1f3SToby Isaac PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 4858040c1f3SToby Isaac ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 4868040c1f3SToby Isaac ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, mode, localX);CHKERRQ(ierr); 4878040c1f3SToby Isaac ierr = DMLocalToGlobalBegin(dm, localX, mode, X);CHKERRQ(ierr); 4888040c1f3SToby Isaac ierr = DMLocalToGlobalEnd(dm, localX, mode, X);CHKERRQ(ierr); 4898040c1f3SToby Isaac ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 490cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 491cb1e1211SMatthew G Knepley } 492cb1e1211SMatthew G Knepley 493cb1e1211SMatthew G Knepley #undef __FUNCT__ 4940f2d7e86SMatthew G. Knepley #define __FUNCT__ "DMPlexProjectFieldLocal" 4953bc3b0a0SMatthew G. Knepley PetscErrorCode DMPlexProjectFieldLocal(DM dm, Vec localU, void (**funcs)(const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscReal [], PetscScalar []), InsertMode mode, Vec localX) 4960f2d7e86SMatthew G. Knepley { 4970f2d7e86SMatthew G. Knepley DM dmAux; 498d5396abcSMatthew G. Knepley PetscDS prob, probAux = NULL; 4990f2d7e86SMatthew G. Knepley Vec A; 500d5396abcSMatthew G. Knepley PetscSection section, sectionAux = NULL; 501b793a5ffSMatthew G. Knepley PetscDualSpace *sp; 502b793a5ffSMatthew G. Knepley PetscInt *Ncf; 503326413afSMatthew G. Knepley PetscScalar *values, *u, *u_x, *a, *a_x; 504d5396abcSMatthew G. Knepley PetscReal *x, *v0, *J, *invJ, detJ; 5059ac3fadcSMatthew G. Knepley PetscInt Nf, dim, spDim, totDim, numValues, cStart, cEnd, cEndInterior, c, f, d, v, comp, maxHeight; 5060f2d7e86SMatthew G. Knepley PetscErrorCode ierr; 5070f2d7e86SMatthew G. Knepley 5080f2d7e86SMatthew G. Knepley PetscFunctionBegin; 509048b7b1eSToby Isaac ierr = DMPlexGetMaxProjectionHeight(dm,&maxHeight);CHKERRQ(ierr); 510048b7b1eSToby Isaac if (maxHeight > 0) {SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Field projection for height > 0 not supported yet");} 5112764a2aaSMatthew G. Knepley ierr = DMGetDS(dm, &prob);CHKERRQ(ierr); 512c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 5130f2d7e86SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 5140f2d7e86SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr); 515b793a5ffSMatthew G. Knepley ierr = PetscMalloc2(Nf, &sp, Nf, &Ncf);CHKERRQ(ierr); 5160f2d7e86SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 5172764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 5182764a2aaSMatthew G. Knepley ierr = PetscDSGetEvaluationArrays(prob, &u, NULL, &u_x);CHKERRQ(ierr); 5192764a2aaSMatthew G. Knepley ierr = PetscDSGetRefCoordArrays(prob, &x, NULL);CHKERRQ(ierr); 5200f2d7e86SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr); 5210f2d7e86SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr); 5220f2d7e86SMatthew G. Knepley if (dmAux) { 5232764a2aaSMatthew G. Knepley ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr); 524326413afSMatthew G. Knepley ierr = DMGetDefaultSection(dmAux, §ionAux);CHKERRQ(ierr); 5252764a2aaSMatthew G. Knepley ierr = PetscDSGetEvaluationArrays(probAux, &a, NULL, &a_x);CHKERRQ(ierr); 5260f2d7e86SMatthew G. Knepley } 527d7ddef95SMatthew G. Knepley ierr = DMPlexInsertBoundaryValues(dm, localU, 0.0, NULL, NULL, NULL);CHKERRQ(ierr); 5280f2d7e86SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, cStart, &numValues, NULL);CHKERRQ(ierr); 5290f2d7e86SMatthew G. Knepley if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section cell closure size %d != dual space dimension %d", numValues, totDim); 5300f2d7e86SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 5310f2d7e86SMatthew G. Knepley ierr = PetscMalloc3(dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 5329ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 5339ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 5340f2d7e86SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 535326413afSMatthew G. Knepley PetscScalar *coefficients = NULL, *coefficientsAux = NULL; 536326413afSMatthew G. Knepley 5378e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 538326413afSMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localU, c, NULL, &coefficients);CHKERRQ(ierr); 539326413afSMatthew G. Knepley if (dmAux) {ierr = DMPlexVecGetClosure(dmAux, sectionAux, A, c, NULL, &coefficientsAux);CHKERRQ(ierr);} 5400f2d7e86SMatthew G. Knepley for (f = 0, v = 0; f < Nf; ++f) { 541d5396abcSMatthew G. Knepley PetscObject obj; 542d5396abcSMatthew G. Knepley PetscClassId id; 5433113607cSMatthew G. Knepley 544d5396abcSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr); 545d5396abcSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 546d5396abcSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 547d5396abcSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 548d5396abcSMatthew G. Knepley 549b793a5ffSMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &sp[f]);CHKERRQ(ierr); 550b793a5ffSMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 551b793a5ffSMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Ncf[f]);CHKERRQ(ierr); 552d5396abcSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 553d5396abcSMatthew G. Knepley PetscFV fv = (PetscFV) obj; 554d5396abcSMatthew G. Knepley 555b793a5ffSMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Ncf[f]);CHKERRQ(ierr); 556302440fdSBarry Smith ierr = PetscFVGetDualSpace(fv, &sp[f]);CHKERRQ(ierr); 557e3e48f69SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 558d5396abcSMatthew G. Knepley } 559b793a5ffSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 5600f2d7e86SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 5610f2d7e86SMatthew G. Knepley PetscQuadrature quad; 5620f2d7e86SMatthew G. Knepley const PetscReal *points, *weights; 5630f2d7e86SMatthew G. Knepley PetscInt numPoints, q; 5640f2d7e86SMatthew G. Knepley 5650f2d7e86SMatthew G. Knepley if (funcs[f]) { 566b793a5ffSMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(sp[f], d, &quad);CHKERRQ(ierr); 5670f2d7e86SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numPoints, &points, &weights);CHKERRQ(ierr); 5680f2d7e86SMatthew G. Knepley for (q = 0; q < numPoints; ++q) { 5690f2d7e86SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &points[q*dim], x); 570326413afSMatthew G. Knepley ierr = EvaluateFieldJets(prob, PETSC_FALSE, q, invJ, coefficients, NULL, u, u_x, NULL);CHKERRQ(ierr); 571326413afSMatthew G. Knepley ierr = EvaluateFieldJets(probAux, PETSC_FALSE, q, invJ, coefficientsAux, NULL, a, a_x, NULL);CHKERRQ(ierr); 5723bc3b0a0SMatthew G. Knepley (*funcs[f])(u, NULL, u_x, a, NULL, a_x, x, &values[v]); 5730f2d7e86SMatthew G. Knepley } 5740f2d7e86SMatthew G. Knepley } else { 575b793a5ffSMatthew G. Knepley for (comp = 0; comp < Ncf[f]; ++comp) values[v+comp] = 0.0; 5760f2d7e86SMatthew G. Knepley } 577b793a5ffSMatthew G. Knepley v += Ncf[f]; 5780f2d7e86SMatthew G. Knepley } 5790f2d7e86SMatthew G. Knepley } 580326413afSMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, section, localU, c, NULL, &coefficients);CHKERRQ(ierr); 581326413afSMatthew G. Knepley if (dmAux) {ierr = DMPlexVecRestoreClosure(dmAux, sectionAux, A, c, NULL, &coefficientsAux);CHKERRQ(ierr);} 5820f2d7e86SMatthew G. Knepley ierr = DMPlexVecSetClosure(dm, section, localX, c, values, mode);CHKERRQ(ierr); 5830f2d7e86SMatthew G. Knepley } 5840f2d7e86SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 5850f2d7e86SMatthew G. Knepley ierr = PetscFree3(v0,J,invJ);CHKERRQ(ierr); 586b793a5ffSMatthew G. Knepley for (f = 0; f < Nf; f++) {ierr = PetscDualSpaceDestroy(&sp[f]);CHKERRQ(ierr);} 587b793a5ffSMatthew G. Knepley ierr = PetscFree2(sp, Ncf);CHKERRQ(ierr); 5880f2d7e86SMatthew G. Knepley PetscFunctionReturn(0); 5890f2d7e86SMatthew G. Knepley } 5900f2d7e86SMatthew G. Knepley 5910f2d7e86SMatthew G. Knepley #undef __FUNCT__ 592d7ddef95SMatthew G. Knepley #define __FUNCT__ "DMPlexInsertBoundaryValues_FEM_Internal" 593ad917190SMatthew G. Knepley static PetscErrorCode DMPlexInsertBoundaryValues_FEM_Internal(DM dm, PetscInt field, DMLabel label, PetscInt numids, const PetscInt ids[], PetscErrorCode (*func)(PetscInt, const PetscReal[], PetscInt, PetscScalar *, void *), void *ctx, Vec locX) 59455f2e967SMatthew G. Knepley { 595ad917190SMatthew G. Knepley PetscErrorCode (**funcs)(PetscInt, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx); 59655f2e967SMatthew G. Knepley void **ctxs; 597d7ddef95SMatthew G. Knepley PetscInt numFields; 598d7ddef95SMatthew G. Knepley PetscErrorCode ierr; 599d7ddef95SMatthew G. Knepley 600d7ddef95SMatthew G. Knepley PetscFunctionBegin; 601d7ddef95SMatthew G. Knepley ierr = DMGetNumFields(dm, &numFields);CHKERRQ(ierr); 602d7ddef95SMatthew G. Knepley ierr = PetscCalloc2(numFields,&funcs,numFields,&ctxs);CHKERRQ(ierr); 603d7ddef95SMatthew G. Knepley funcs[field] = func; 604d7ddef95SMatthew G. Knepley ctxs[field] = ctx; 605d7ddef95SMatthew G. Knepley ierr = DMPlexProjectFunctionLabelLocal(dm, label, numids, ids, funcs, ctxs, INSERT_BC_VALUES, locX);CHKERRQ(ierr); 606d7ddef95SMatthew G. Knepley ierr = PetscFree2(funcs,ctxs);CHKERRQ(ierr); 607d7ddef95SMatthew G. Knepley PetscFunctionReturn(0); 608d7ddef95SMatthew G. Knepley } 609d7ddef95SMatthew G. Knepley 610d7ddef95SMatthew G. Knepley #undef __FUNCT__ 611d7ddef95SMatthew G. Knepley #define __FUNCT__ "DMPlexInsertBoundaryValues_FVM_Internal" 6120e0f25f2SMatthew G. Knepley /* This ignores numcomps/comps */ 613d7ddef95SMatthew G. Knepley static PetscErrorCode DMPlexInsertBoundaryValues_FVM_Internal(DM dm, PetscReal time, Vec faceGeometry, Vec cellGeometry, Vec Grad, 614d7ddef95SMatthew G. Knepley PetscInt field, DMLabel label, PetscInt numids, const PetscInt ids[], PetscErrorCode (*func)(PetscReal,const PetscReal*,const PetscReal*,const PetscScalar*,PetscScalar*,void*), void *ctx, Vec locX) 615d7ddef95SMatthew G. Knepley { 61661f58d28SMatthew G. Knepley PetscDS prob; 617da97024aSMatthew G. Knepley PetscSF sf; 618d7ddef95SMatthew G. Knepley DM dmFace, dmCell, dmGrad; 619d7ddef95SMatthew G. Knepley const PetscScalar *facegeom, *cellgeom, *grad; 620da97024aSMatthew G. Knepley const PetscInt *leaves; 621d7ddef95SMatthew G. Knepley PetscScalar *x, *fx; 622520b3818SMatthew G. Knepley PetscInt dim, nleaves, loc, fStart, fEnd, pdim, i; 623d7ddef95SMatthew G. Knepley PetscErrorCode ierr; 624d7ddef95SMatthew G. Knepley 625d7ddef95SMatthew G. Knepley PetscFunctionBegin; 626da97024aSMatthew G. Knepley ierr = DMGetPointSF(dm, &sf);CHKERRQ(ierr); 627da97024aSMatthew G. Knepley ierr = PetscSFGetGraph(sf, NULL, &nleaves, &leaves, NULL);CHKERRQ(ierr); 628da97024aSMatthew G. Knepley nleaves = PetscMax(0, nleaves); 629d7ddef95SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 630d7ddef95SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 1, &fStart, &fEnd);CHKERRQ(ierr); 63161f58d28SMatthew G. Knepley ierr = DMGetDS(dm, &prob);CHKERRQ(ierr); 632d7ddef95SMatthew G. Knepley ierr = VecGetDM(faceGeometry, &dmFace);CHKERRQ(ierr); 633d7ddef95SMatthew G. Knepley ierr = VecGetArrayRead(faceGeometry, &facegeom);CHKERRQ(ierr); 634d7ddef95SMatthew G. Knepley ierr = VecGetDM(cellGeometry, &dmCell);CHKERRQ(ierr); 635d7ddef95SMatthew G. Knepley ierr = VecGetArrayRead(cellGeometry, &cellgeom);CHKERRQ(ierr); 636d7ddef95SMatthew G. Knepley if (Grad) { 637c0a6632aSMatthew G. Knepley PetscFV fv; 638c0a6632aSMatthew G. Knepley 639c0a6632aSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fv);CHKERRQ(ierr); 640d7ddef95SMatthew G. Knepley ierr = VecGetDM(Grad, &dmGrad);CHKERRQ(ierr); 641d7ddef95SMatthew G. Knepley ierr = VecGetArrayRead(Grad, &grad);CHKERRQ(ierr); 642d7ddef95SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &pdim);CHKERRQ(ierr); 643d7ddef95SMatthew G. Knepley ierr = DMGetWorkArray(dm, pdim, PETSC_SCALAR, &fx);CHKERRQ(ierr); 644d7ddef95SMatthew G. Knepley } 645d7ddef95SMatthew G. Knepley ierr = VecGetArray(locX, &x);CHKERRQ(ierr); 646d7ddef95SMatthew G. Knepley for (i = 0; i < numids; ++i) { 647d7ddef95SMatthew G. Knepley IS faceIS; 648d7ddef95SMatthew G. Knepley const PetscInt *faces; 649d7ddef95SMatthew G. Knepley PetscInt numFaces, f; 650d7ddef95SMatthew G. Knepley 651d7ddef95SMatthew G. Knepley ierr = DMLabelGetStratumIS(label, ids[i], &faceIS);CHKERRQ(ierr); 652d7ddef95SMatthew G. Knepley if (!faceIS) continue; /* No points with that id on this process */ 653d7ddef95SMatthew G. Knepley ierr = ISGetLocalSize(faceIS, &numFaces);CHKERRQ(ierr); 654d7ddef95SMatthew G. Knepley ierr = ISGetIndices(faceIS, &faces);CHKERRQ(ierr); 655d7ddef95SMatthew G. Knepley for (f = 0; f < numFaces; ++f) { 656d7ddef95SMatthew G. Knepley const PetscInt face = faces[f], *cells; 657d7ddef95SMatthew G. Knepley const PetscFVFaceGeom *fg; 658d7ddef95SMatthew G. Knepley 659d7ddef95SMatthew G. Knepley if ((face < fStart) || (face >= fEnd)) continue; /* Refinement adds non-faces to labels */ 660da97024aSMatthew G. Knepley ierr = PetscFindInt(face, nleaves, (PetscInt *) leaves, &loc);CHKERRQ(ierr); 661da97024aSMatthew G. Knepley if (loc >= 0) continue; 662d7ddef95SMatthew G. Knepley ierr = DMPlexPointLocalRead(dmFace, face, facegeom, &fg);CHKERRQ(ierr); 663d7ddef95SMatthew G. Knepley ierr = DMPlexGetSupport(dm, face, &cells);CHKERRQ(ierr); 664d7ddef95SMatthew G. Knepley if (Grad) { 665d7ddef95SMatthew G. Knepley const PetscFVCellGeom *cg; 666d7ddef95SMatthew G. Knepley const PetscScalar *cx, *cgrad; 667d7ddef95SMatthew G. Knepley PetscScalar *xG; 668d7ddef95SMatthew G. Knepley PetscReal dx[3]; 669d7ddef95SMatthew G. Knepley PetscInt d; 670d7ddef95SMatthew G. Knepley 671d7ddef95SMatthew G. Knepley ierr = DMPlexPointLocalRead(dmCell, cells[0], cellgeom, &cg);CHKERRQ(ierr); 672d7ddef95SMatthew G. Knepley ierr = DMPlexPointLocalRead(dm, cells[0], x, &cx);CHKERRQ(ierr); 673d7ddef95SMatthew G. Knepley ierr = DMPlexPointLocalRead(dmGrad, cells[0], grad, &cgrad);CHKERRQ(ierr); 674520b3818SMatthew G. Knepley ierr = DMPlexPointLocalFieldRef(dm, cells[1], field, x, &xG);CHKERRQ(ierr); 675d7ddef95SMatthew G. Knepley DMPlex_WaxpyD_Internal(dim, -1, cg->centroid, fg->centroid, dx); 676d7ddef95SMatthew G. Knepley for (d = 0; d < pdim; ++d) fx[d] = cx[d] + DMPlex_DotD_Internal(dim, &cgrad[d*dim], dx); 677520b3818SMatthew G. Knepley ierr = (*func)(time, fg->centroid, fg->normal, fx, xG, ctx);CHKERRQ(ierr); 678d7ddef95SMatthew G. Knepley } else { 679d7ddef95SMatthew G. Knepley const PetscScalar *xI; 680d7ddef95SMatthew G. Knepley PetscScalar *xG; 681d7ddef95SMatthew G. Knepley 682d7ddef95SMatthew G. Knepley ierr = DMPlexPointLocalRead(dm, cells[0], x, &xI);CHKERRQ(ierr); 683520b3818SMatthew G. Knepley ierr = DMPlexPointLocalFieldRef(dm, cells[1], field, x, &xG);CHKERRQ(ierr); 684520b3818SMatthew G. Knepley ierr = (*func)(time, fg->centroid, fg->normal, xI, xG, ctx);CHKERRQ(ierr); 685d7ddef95SMatthew G. Knepley } 686d7ddef95SMatthew G. Knepley } 687d7ddef95SMatthew G. Knepley ierr = ISRestoreIndices(faceIS, &faces);CHKERRQ(ierr); 688d7ddef95SMatthew G. Knepley ierr = ISDestroy(&faceIS);CHKERRQ(ierr); 689d7ddef95SMatthew G. Knepley } 690d7ddef95SMatthew G. Knepley ierr = VecRestoreArray(locX, &x);CHKERRQ(ierr); 691d7ddef95SMatthew G. Knepley if (Grad) { 692d7ddef95SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, pdim, PETSC_SCALAR, &fx);CHKERRQ(ierr); 693d7ddef95SMatthew G. Knepley ierr = VecRestoreArrayRead(Grad, &grad);CHKERRQ(ierr); 694d7ddef95SMatthew G. Knepley } 695d7ddef95SMatthew G. Knepley ierr = VecRestoreArrayRead(cellGeometry, &cellgeom);CHKERRQ(ierr); 696d7ddef95SMatthew G. Knepley ierr = VecRestoreArrayRead(faceGeometry, &facegeom);CHKERRQ(ierr); 697d7ddef95SMatthew G. Knepley PetscFunctionReturn(0); 698d7ddef95SMatthew G. Knepley } 699d7ddef95SMatthew G. Knepley 700d7ddef95SMatthew G. Knepley #undef __FUNCT__ 701d7ddef95SMatthew G. Knepley #define __FUNCT__ "DMPlexInsertBoundaryValues" 702d7ddef95SMatthew G. Knepley PetscErrorCode DMPlexInsertBoundaryValues(DM dm, Vec locX, PetscReal time, Vec faceGeomFVM, Vec cellGeomFVM, Vec gradFVM) 703d7ddef95SMatthew G. Knepley { 704d7ddef95SMatthew G. Knepley PetscInt numBd, b; 70555f2e967SMatthew G. Knepley PetscErrorCode ierr; 70655f2e967SMatthew G. Knepley 70755f2e967SMatthew G. Knepley PetscFunctionBegin; 70855f2e967SMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 709d7ddef95SMatthew G. Knepley PetscValidHeaderSpecific(locX, VEC_CLASSID, 2); 710d7ddef95SMatthew G. Knepley if (faceGeomFVM) {PetscValidHeaderSpecific(faceGeomFVM, VEC_CLASSID, 4);} 711d7ddef95SMatthew G. Knepley if (cellGeomFVM) {PetscValidHeaderSpecific(cellGeomFVM, VEC_CLASSID, 5);} 712d7ddef95SMatthew G. Knepley if (gradFVM) {PetscValidHeaderSpecific(gradFVM, VEC_CLASSID, 6);} 71355f2e967SMatthew G. Knepley ierr = DMPlexGetNumBoundary(dm, &numBd);CHKERRQ(ierr); 71455f2e967SMatthew G. Knepley for (b = 0; b < numBd; ++b) { 71555f2e967SMatthew G. Knepley PetscBool isEssential; 716d7ddef95SMatthew G. Knepley const char *labelname; 717d7ddef95SMatthew G. Knepley DMLabel label; 718d7ddef95SMatthew G. Knepley PetscInt field; 719d7ddef95SMatthew G. Knepley PetscObject obj; 720d7ddef95SMatthew G. Knepley PetscClassId id; 72155f2e967SMatthew G. Knepley void (*func)(); 722d7ddef95SMatthew G. Knepley PetscInt numids; 723d7ddef95SMatthew G. Knepley const PetscInt *ids; 72455f2e967SMatthew G. Knepley void *ctx; 72555f2e967SMatthew G. Knepley 7260e0f25f2SMatthew G. Knepley ierr = DMPlexGetBoundary(dm, b, &isEssential, NULL, &labelname, &field, NULL, NULL, &func, &numids, &ids, &ctx);CHKERRQ(ierr); 727d7ddef95SMatthew G. Knepley if (!isEssential) continue; 72863d5297fSMatthew G. Knepley ierr = DMPlexGetLabel(dm, labelname, &label);CHKERRQ(ierr); 729d7ddef95SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 730d7ddef95SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 731d7ddef95SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 732ad917190SMatthew G. Knepley ierr = DMPlexInsertBoundaryValues_FEM_Internal(dm, field, label, numids, ids, (PetscErrorCode (*)(PetscInt, const PetscReal[], PetscInt, PetscScalar *, void *)) func, ctx, locX);CHKERRQ(ierr); 733d7ddef95SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 73443ea7facSMatthew G. Knepley if (!faceGeomFVM) continue; 735d7ddef95SMatthew G. Knepley ierr = DMPlexInsertBoundaryValues_FVM_Internal(dm, time, faceGeomFVM, cellGeomFVM, gradFVM, 736d7ddef95SMatthew G. Knepley field, label, numids, ids, (PetscErrorCode (*)(PetscReal,const PetscReal*,const PetscReal*,const PetscScalar*,PetscScalar*,void*)) func, ctx, locX);CHKERRQ(ierr); 737d7ddef95SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 73855f2e967SMatthew G. Knepley } 73955f2e967SMatthew G. Knepley PetscFunctionReturn(0); 74055f2e967SMatthew G. Knepley } 74155f2e967SMatthew G. Knepley 742cb1e1211SMatthew G Knepley #undef __FUNCT__ 743cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexComputeL2Diff" 744cb1e1211SMatthew G Knepley /*@C 745cb1e1211SMatthew G Knepley DMPlexComputeL2Diff - This function computes the L_2 difference between a function u and an FEM interpolant solution u_h. 746cb1e1211SMatthew G Knepley 747cb1e1211SMatthew G Knepley Input Parameters: 748cb1e1211SMatthew G Knepley + dm - The DM 749cb1e1211SMatthew G Knepley . funcs - The functions to evaluate for each field component 75051259fa3SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 751cb1e1211SMatthew G Knepley - X - The coefficient vector u_h 752cb1e1211SMatthew G Knepley 753cb1e1211SMatthew G Knepley Output Parameter: 754cb1e1211SMatthew G Knepley . diff - The diff ||u - u_h||_2 755cb1e1211SMatthew G Knepley 756cb1e1211SMatthew G Knepley Level: developer 757cb1e1211SMatthew G Knepley 75815496722SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2FieldDiff(), DMPlexComputeL2GradientDiff() 759878cb397SSatish Balay @*/ 760ad917190SMatthew G. Knepley PetscErrorCode DMPlexComputeL2Diff(DM dm, PetscErrorCode (**funcs)(PetscInt, const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, Vec X, PetscReal *diff) 761cb1e1211SMatthew G Knepley { 762cb1e1211SMatthew G Knepley const PetscInt debug = 0; 763cb1e1211SMatthew G Knepley PetscSection section; 764c5bbbd5bSMatthew G. Knepley PetscQuadrature quad; 765cb1e1211SMatthew G Knepley Vec localX; 76615496722SMatthew G. Knepley PetscScalar *funcVal, *interpolant; 767cb1e1211SMatthew G Knepley PetscReal *coords, *v0, *J, *invJ, detJ; 768cb1e1211SMatthew G Knepley PetscReal localDiff = 0.0; 76915496722SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 7709ac3fadcSMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, numQuadPoints, cStart, cEnd, cEndInterior, c, field, fieldOffset; 771cb1e1211SMatthew G Knepley PetscErrorCode ierr; 772cb1e1211SMatthew G Knepley 773cb1e1211SMatthew G Knepley PetscFunctionBegin; 774c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 775cb1e1211SMatthew G Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 776cb1e1211SMatthew G Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 777cb1e1211SMatthew G Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 778cb1e1211SMatthew G Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 779cb1e1211SMatthew G Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 780cb1e1211SMatthew G Knepley for (field = 0; field < numFields; ++field) { 78115496722SMatthew G. Knepley PetscObject obj; 78215496722SMatthew G. Knepley PetscClassId id; 783c5bbbd5bSMatthew G. Knepley PetscInt Nc; 784c5bbbd5bSMatthew G. Knepley 78515496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 78615496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 78715496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 78815496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 78915496722SMatthew G. Knepley 7900f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 7910f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 79215496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 79315496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 79415496722SMatthew G. Knepley 79515496722SMatthew G. Knepley ierr = PetscFVGetQuadrature(fv, &quad);CHKERRQ(ierr); 79615496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 79715496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 798c5bbbd5bSMatthew G. Knepley numComponents += Nc; 799cb1e1211SMatthew G Knepley } 80015496722SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 8010f2d7e86SMatthew G. Knepley ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); 80215496722SMatthew G. Knepley ierr = PetscMalloc6(numComponents,&funcVal,numComponents,&interpolant,dim,&coords,dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 803cb1e1211SMatthew G Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 8049ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 8059ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 806cb1e1211SMatthew G Knepley for (c = cStart; c < cEnd; ++c) { 807a1e44745SMatthew G. Knepley PetscScalar *x = NULL; 808cb1e1211SMatthew G Knepley PetscReal elemDiff = 0.0; 809cb1e1211SMatthew G Knepley 8108e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 811cb1e1211SMatthew G Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 812cb1e1211SMatthew G Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 813cb1e1211SMatthew G Knepley 81415496722SMatthew G. Knepley for (field = 0, fieldOffset = 0; field < numFields; ++field) { 81515496722SMatthew G. Knepley PetscObject obj; 81615496722SMatthew G. Knepley PetscClassId id; 817c110b1eeSGeoffrey Irving void * const ctx = ctxs ? ctxs[field] : NULL; 81815496722SMatthew G. Knepley PetscInt Nb, Nc, q, fc; 819cb1e1211SMatthew G Knepley 82015496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 82115496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 82215496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEGetNumComponents((PetscFE) obj, &Nc);CHKERRQ(ierr);ierr = PetscFEGetDimension((PetscFE) obj, &Nb);CHKERRQ(ierr);} 82315496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVGetNumComponents((PetscFV) obj, &Nc);CHKERRQ(ierr);Nb = 1;} 82415496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 825cb1e1211SMatthew G Knepley if (debug) { 826cb1e1211SMatthew G Knepley char title[1024]; 827cb1e1211SMatthew G Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 82815496722SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Nc, &x[fieldOffset]);CHKERRQ(ierr); 829cb1e1211SMatthew G Knepley } 830cb1e1211SMatthew G Knepley for (q = 0; q < numQuadPoints; ++q) { 83115496722SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &quadPoints[q*dim], coords); 832ad917190SMatthew G. Knepley ierr = (*funcs[field])(dim, coords, numFields, funcVal, ctx);CHKERRQ(ierr); 83315496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEInterpolate_Static((PetscFE) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 83415496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVInterpolate_Static((PetscFV) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 83515496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 83615496722SMatthew G. Knepley for (fc = 0; fc < Nc; ++fc) { 83715496722SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d field %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 83815496722SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ; 839cb1e1211SMatthew G Knepley } 840cb1e1211SMatthew G Knepley } 84115496722SMatthew G. Knepley fieldOffset += Nb*Nc; 842cb1e1211SMatthew G Knepley } 843cb1e1211SMatthew G Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 844cb1e1211SMatthew G Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d diff %g\n", c, elemDiff);CHKERRQ(ierr);} 845cb1e1211SMatthew G Knepley localDiff += elemDiff; 846cb1e1211SMatthew G Knepley } 84715496722SMatthew G. Knepley ierr = PetscFree6(funcVal,interpolant,coords,v0,J,invJ);CHKERRQ(ierr); 848cb1e1211SMatthew G Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 849a529e722SBarry Smith ierr = MPI_Allreduce(&localDiff, diff, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 850cb1e1211SMatthew G Knepley *diff = PetscSqrtReal(*diff); 851cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 852cb1e1211SMatthew G Knepley } 853cb1e1211SMatthew G Knepley 854cb1e1211SMatthew G Knepley #undef __FUNCT__ 85540e14135SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeL2GradientDiff" 85640e14135SMatthew G. Knepley /*@C 85740e14135SMatthew G. Knepley DMPlexComputeL2GradientDiff - This function computes the L_2 difference between the gradient of a function u and an FEM interpolant solution grad u_h. 85840e14135SMatthew G. Knepley 85940e14135SMatthew G. Knepley Input Parameters: 86040e14135SMatthew G. Knepley + dm - The DM 86140e14135SMatthew G. Knepley . funcs - The gradient functions to evaluate for each field component 86251259fa3SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 86340e14135SMatthew G. Knepley . X - The coefficient vector u_h 86440e14135SMatthew G. Knepley - n - The vector to project along 86540e14135SMatthew G. Knepley 86640e14135SMatthew G. Knepley Output Parameter: 86740e14135SMatthew G. Knepley . diff - The diff ||(grad u - grad u_h) . n||_2 86840e14135SMatthew G. Knepley 86940e14135SMatthew G. Knepley Level: developer 87040e14135SMatthew G. Knepley 87140e14135SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2Diff() 87240e14135SMatthew G. Knepley @*/ 873ad917190SMatthew G. Knepley PetscErrorCode DMPlexComputeL2GradientDiff(DM dm, PetscErrorCode (**funcs)(PetscInt, const PetscReal [], const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, Vec X, const PetscReal n[], PetscReal *diff) 874cb1e1211SMatthew G Knepley { 87540e14135SMatthew G. Knepley const PetscInt debug = 0; 876cb1e1211SMatthew G Knepley PetscSection section; 87740e14135SMatthew G. Knepley PetscQuadrature quad; 87840e14135SMatthew G. Knepley Vec localX; 87940e14135SMatthew G. Knepley PetscScalar *funcVal, *interpolantVec; 88040e14135SMatthew G. Knepley PetscReal *coords, *realSpaceDer, *v0, *J, *invJ, detJ; 88140e14135SMatthew G. Knepley PetscReal localDiff = 0.0; 8829ac3fadcSMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, cStart, cEnd, cEndInterior, c, field, fieldOffset, comp; 883cb1e1211SMatthew G Knepley PetscErrorCode ierr; 884cb1e1211SMatthew G Knepley 885cb1e1211SMatthew G Knepley PetscFunctionBegin; 886c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 88740e14135SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 88840e14135SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 88940e14135SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 89040e14135SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 89140e14135SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 892652b88e8SMatthew G. Knepley for (field = 0; field < numFields; ++field) { 8930f2d7e86SMatthew G. Knepley PetscFE fe; 89440e14135SMatthew G. Knepley PetscInt Nc; 895652b88e8SMatthew G. Knepley 8960f2d7e86SMatthew G. Knepley ierr = DMGetField(dm, field, (PetscObject *) &fe);CHKERRQ(ierr); 8970f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 8980f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 89940e14135SMatthew G. Knepley numComponents += Nc; 900652b88e8SMatthew G. Knepley } 90140e14135SMatthew G. Knepley /* ierr = DMPlexProjectFunctionLocal(dm, fe, funcs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); */ 90240e14135SMatthew G. Knepley ierr = PetscMalloc7(numComponents,&funcVal,dim,&coords,dim,&realSpaceDer,dim,&v0,dim*dim,&J,dim*dim,&invJ,dim,&interpolantVec);CHKERRQ(ierr); 90340e14135SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 9049ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 9059ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 90640e14135SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 90740e14135SMatthew G. Knepley PetscScalar *x = NULL; 90840e14135SMatthew G. Knepley PetscReal elemDiff = 0.0; 909652b88e8SMatthew G. Knepley 9108e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 91140e14135SMatthew G. Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 91240e14135SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 91340e14135SMatthew G. Knepley 91440e14135SMatthew G. Knepley for (field = 0, comp = 0, fieldOffset = 0; field < numFields; ++field) { 9150f2d7e86SMatthew G. Knepley PetscFE fe; 91651259fa3SMatthew G. Knepley void * const ctx = ctxs ? ctxs[field] : NULL; 91721454ff5SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 91840e14135SMatthew G. Knepley PetscReal *basisDer; 91921454ff5SMatthew G. Knepley PetscInt numQuadPoints, Nb, Ncomp, q, d, e, fc, f, g; 92040e14135SMatthew G. Knepley 9210f2d7e86SMatthew G. Knepley ierr = DMGetField(dm, field, (PetscObject *) &fe);CHKERRQ(ierr); 92221454ff5SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 9230f2d7e86SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr); 9240f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Ncomp);CHKERRQ(ierr); 9250f2d7e86SMatthew G. Knepley ierr = PetscFEGetDefaultTabulation(fe, NULL, &basisDer, NULL);CHKERRQ(ierr); 92640e14135SMatthew G. Knepley if (debug) { 92740e14135SMatthew G. Knepley char title[1024]; 92840e14135SMatthew G. Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 92940e14135SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Ncomp, &x[fieldOffset]);CHKERRQ(ierr); 930652b88e8SMatthew G. Knepley } 93140e14135SMatthew G. Knepley for (q = 0; q < numQuadPoints; ++q) { 93240e14135SMatthew G. Knepley for (d = 0; d < dim; d++) { 93340e14135SMatthew G. Knepley coords[d] = v0[d]; 93440e14135SMatthew G. Knepley for (e = 0; e < dim; e++) { 93540e14135SMatthew G. Knepley coords[d] += J[d*dim+e]*(quadPoints[q*dim+e] + 1.0); 936652b88e8SMatthew G. Knepley } 93740e14135SMatthew G. Knepley } 938ad917190SMatthew G. Knepley ierr = (*funcs[field])(dim, coords, n, numFields, funcVal, ctx);CHKERRQ(ierr); 93940e14135SMatthew G. Knepley for (fc = 0; fc < Ncomp; ++fc) { 94040e14135SMatthew G. Knepley PetscScalar interpolant = 0.0; 94140e14135SMatthew G. Knepley 94240e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) interpolantVec[d] = 0.0; 94340e14135SMatthew G. Knepley for (f = 0; f < Nb; ++f) { 94440e14135SMatthew G. Knepley const PetscInt fidx = f*Ncomp+fc; 94540e14135SMatthew G. Knepley 94640e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) { 94740e14135SMatthew G. Knepley realSpaceDer[d] = 0.0; 94840e14135SMatthew G. Knepley for (g = 0; g < dim; ++g) { 94940e14135SMatthew G. Knepley realSpaceDer[d] += invJ[g*dim+d]*basisDer[(q*Nb*Ncomp+fidx)*dim+g]; 95040e14135SMatthew G. Knepley } 95140e14135SMatthew G. Knepley interpolantVec[d] += x[fieldOffset+fidx]*realSpaceDer[d]; 95240e14135SMatthew G. Knepley } 95340e14135SMatthew G. Knepley } 95440e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) interpolant += interpolantVec[d]*n[d]; 95540e14135SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d fieldDer %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 95640e14135SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant - funcVal[fc]))*quadWeights[q]*detJ; 95740e14135SMatthew G. Knepley } 95840e14135SMatthew G. Knepley } 95940e14135SMatthew G. Knepley comp += Ncomp; 96040e14135SMatthew G. Knepley fieldOffset += Nb*Ncomp; 96140e14135SMatthew G. Knepley } 96240e14135SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 96340e14135SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d diff %g\n", c, elemDiff);CHKERRQ(ierr);} 96440e14135SMatthew G. Knepley localDiff += elemDiff; 96540e14135SMatthew G. Knepley } 96640e14135SMatthew G. Knepley ierr = PetscFree7(funcVal,coords,realSpaceDer,v0,J,invJ,interpolantVec);CHKERRQ(ierr); 96740e14135SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 968a529e722SBarry Smith ierr = MPI_Allreduce(&localDiff, diff, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 96940e14135SMatthew G. Knepley *diff = PetscSqrtReal(*diff); 970cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 971cb1e1211SMatthew G Knepley } 972cb1e1211SMatthew G Knepley 973a0845e3aSMatthew G. Knepley #undef __FUNCT__ 97473d901b8SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeL2FieldDiff" 97515496722SMatthew G. Knepley /*@C 97615496722SMatthew G. Knepley DMPlexComputeL2FieldDiff - This function computes the L_2 difference between a function u and an FEM interpolant solution u_h, separated into field components. 97715496722SMatthew G. Knepley 97815496722SMatthew G. Knepley Input Parameters: 97915496722SMatthew G. Knepley + dm - The DM 98015496722SMatthew G. Knepley . funcs - The functions to evaluate for each field component 98115496722SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 98215496722SMatthew G. Knepley - X - The coefficient vector u_h 98315496722SMatthew G. Knepley 98415496722SMatthew G. Knepley Output Parameter: 98515496722SMatthew G. Knepley . diff - The array of differences, ||u^f - u^f_h||_2 98615496722SMatthew G. Knepley 98715496722SMatthew G. Knepley Level: developer 98815496722SMatthew G. Knepley 98915496722SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2Diff(), DMPlexComputeL2GradientDiff() 99015496722SMatthew G. Knepley @*/ 991ad917190SMatthew G. Knepley PetscErrorCode DMPlexComputeL2FieldDiff(DM dm, PetscErrorCode (**funcs)(PetscInt, const PetscReal [], PetscInt, PetscScalar *, void *), void **ctxs, Vec X, PetscReal diff[]) 99273d901b8SMatthew G. Knepley { 99373d901b8SMatthew G. Knepley const PetscInt debug = 0; 99473d901b8SMatthew G. Knepley PetscSection section; 99573d901b8SMatthew G. Knepley PetscQuadrature quad; 99673d901b8SMatthew G. Knepley Vec localX; 99715496722SMatthew G. Knepley PetscScalar *funcVal, *interpolant; 99873d901b8SMatthew G. Knepley PetscReal *coords, *v0, *J, *invJ, detJ; 99973d901b8SMatthew G. Knepley PetscReal *localDiff; 100015496722SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 10019ac3fadcSMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, numQuadPoints, cStart, cEnd, cEndInterior, c, field, fieldOffset; 100273d901b8SMatthew G. Knepley PetscErrorCode ierr; 100373d901b8SMatthew G. Knepley 100473d901b8SMatthew G. Knepley PetscFunctionBegin; 1005c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 100673d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 100773d901b8SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 100873d901b8SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 100973d901b8SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 101073d901b8SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 101173d901b8SMatthew G. Knepley for (field = 0; field < numFields; ++field) { 101215496722SMatthew G. Knepley PetscObject obj; 101315496722SMatthew G. Knepley PetscClassId id; 101473d901b8SMatthew G. Knepley PetscInt Nc; 101573d901b8SMatthew G. Knepley 101615496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 101715496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 101815496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 101915496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 102015496722SMatthew G. Knepley 10210f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 10220f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 102315496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 102415496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 102515496722SMatthew G. Knepley 102615496722SMatthew G. Knepley ierr = PetscFVGetQuadrature(fv, &quad);CHKERRQ(ierr); 102715496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 102815496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 102973d901b8SMatthew G. Knepley numComponents += Nc; 103073d901b8SMatthew G. Knepley } 103115496722SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 10320f2d7e86SMatthew G. Knepley ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); 103315496722SMatthew G. Knepley ierr = PetscCalloc7(numFields,&localDiff,numComponents,&funcVal,numComponents,&interpolant,dim,&coords,dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 103473d901b8SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 10359ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 10369ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 103773d901b8SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 103873d901b8SMatthew G. Knepley PetscScalar *x = NULL; 103973d901b8SMatthew G. Knepley 10408e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 104173d901b8SMatthew G. Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 104273d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 104373d901b8SMatthew G. Knepley 104415496722SMatthew G. Knepley for (field = 0, fieldOffset = 0; field < numFields; ++field) { 104515496722SMatthew G. Knepley PetscObject obj; 104615496722SMatthew G. Knepley PetscClassId id; 104773d901b8SMatthew G. Knepley void * const ctx = ctxs ? ctxs[field] : NULL; 104815496722SMatthew G. Knepley PetscInt Nb, Nc, q, fc; 104973d901b8SMatthew G. Knepley 105015496722SMatthew G. Knepley PetscReal elemDiff = 0.0; 105115496722SMatthew G. Knepley 105215496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 105315496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 105415496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEGetNumComponents((PetscFE) obj, &Nc);CHKERRQ(ierr);ierr = PetscFEGetDimension((PetscFE) obj, &Nb);CHKERRQ(ierr);} 105515496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVGetNumComponents((PetscFV) obj, &Nc);CHKERRQ(ierr);Nb = 1;} 105615496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 105773d901b8SMatthew G. Knepley if (debug) { 105873d901b8SMatthew G. Knepley char title[1024]; 105973d901b8SMatthew G. Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 106015496722SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Nc, &x[fieldOffset]);CHKERRQ(ierr); 106173d901b8SMatthew G. Knepley } 106273d901b8SMatthew G. Knepley for (q = 0; q < numQuadPoints; ++q) { 106315496722SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &quadPoints[q*dim], coords); 1064ad917190SMatthew G. Knepley ierr = (*funcs[field])(dim, coords, numFields, funcVal, ctx);CHKERRQ(ierr); 106515496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEInterpolate_Static((PetscFE) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 106615496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVInterpolate_Static((PetscFV) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 106715496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 106815496722SMatthew G. Knepley for (fc = 0; fc < Nc; ++fc) { 106915496722SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d field %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 107015496722SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ; 107173d901b8SMatthew G. Knepley } 107273d901b8SMatthew G. Knepley } 107315496722SMatthew G. Knepley fieldOffset += Nb*Nc; 107473d901b8SMatthew G. Knepley localDiff[field] += elemDiff; 107573d901b8SMatthew G. Knepley } 107673d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 107773d901b8SMatthew G. Knepley } 107873d901b8SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 1079a529e722SBarry Smith ierr = MPI_Allreduce(localDiff, diff, numFields, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 108073d901b8SMatthew G. Knepley for (field = 0; field < numFields; ++field) diff[field] = PetscSqrtReal(diff[field]); 108115496722SMatthew G. Knepley ierr = PetscFree7(localDiff,funcVal,interpolant,coords,v0,J,invJ);CHKERRQ(ierr); 108273d901b8SMatthew G. Knepley PetscFunctionReturn(0); 108373d901b8SMatthew G. Knepley } 108473d901b8SMatthew G. Knepley 108573d901b8SMatthew G. Knepley #undef __FUNCT__ 108673d901b8SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeIntegralFEM" 108773d901b8SMatthew G. Knepley /*@ 108873d901b8SMatthew G. Knepley DMPlexComputeIntegralFEM - Form the local integral F from the local input X using pointwise functions specified by the user 108973d901b8SMatthew G. Knepley 109073d901b8SMatthew G. Knepley Input Parameters: 109173d901b8SMatthew G. Knepley + dm - The mesh 109273d901b8SMatthew G. Knepley . X - Local input vector 109373d901b8SMatthew G. Knepley - user - The user context 109473d901b8SMatthew G. Knepley 109573d901b8SMatthew G. Knepley Output Parameter: 109673d901b8SMatthew G. Knepley . integral - Local integral for each field 109773d901b8SMatthew G. Knepley 109873d901b8SMatthew G. Knepley Level: developer 109973d901b8SMatthew G. Knepley 110073d901b8SMatthew G. Knepley .seealso: DMPlexComputeResidualFEM() 110173d901b8SMatthew G. Knepley @*/ 11020f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexComputeIntegralFEM(DM dm, Vec X, PetscReal *integral, void *user) 110373d901b8SMatthew G. Knepley { 110473d901b8SMatthew G. Knepley DM_Plex *mesh = (DM_Plex *) dm->data; 110573d901b8SMatthew G. Knepley DM dmAux; 110673d901b8SMatthew G. Knepley Vec localX, A; 11072764a2aaSMatthew G. Knepley PetscDS prob, probAux = NULL; 110873d901b8SMatthew G. Knepley PetscSection section, sectionAux; 1109bbce034cSMatthew G. Knepley PetscFECellGeom *cgeom; 111073d901b8SMatthew G. Knepley PetscScalar *u, *a = NULL; 1111c1f031eeSMatthew G. Knepley PetscReal *lintegral, *vol; 11129ac3fadcSMatthew G. Knepley PetscInt dim, Nf, f, numCells, cStart, cEnd, cEndInterior, c; 11130f2d7e86SMatthew G. Knepley PetscInt totDim, totDimAux; 111473d901b8SMatthew G. Knepley PetscErrorCode ierr; 111573d901b8SMatthew G. Knepley 111673d901b8SMatthew G. Knepley PetscFunctionBegin; 1117c1f031eeSMatthew G. Knepley ierr = PetscLogEventBegin(DMPLEX_IntegralFEM,dm,0,0,0);CHKERRQ(ierr); 111873d901b8SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 111973d901b8SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 112073d901b8SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 1121c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 112273d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 11232764a2aaSMatthew G. Knepley ierr = DMGetDS(dm, &prob);CHKERRQ(ierr); 11242764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 112573d901b8SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr); 112673d901b8SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 11279ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 11289ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 112973d901b8SMatthew G. Knepley numCells = cEnd - cStart; 113073d901b8SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr); 113173d901b8SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr); 113273d901b8SMatthew G. Knepley if (dmAux) { 113373d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dmAux, §ionAux);CHKERRQ(ierr); 11342764a2aaSMatthew G. Knepley ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr); 11352764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr); 113673d901b8SMatthew G. Knepley } 1137d7ddef95SMatthew G. Knepley ierr = DMPlexInsertBoundaryValues(dm, localX, 0.0, NULL, NULL, NULL);CHKERRQ(ierr); 1138c1f031eeSMatthew G. Knepley ierr = PetscMalloc4(Nf,&lintegral,numCells*totDim,&u,numCells,&cgeom,numCells,&vol);CHKERRQ(ierr); 11390f2d7e86SMatthew G. Knepley if (dmAux) {ierr = PetscMalloc1(numCells*totDimAux, &a);CHKERRQ(ierr);} 1140c1f031eeSMatthew G. Knepley for (f = 0; f < Nf; ++f) {lintegral[f] = 0.0;} 114173d901b8SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 114273d901b8SMatthew G. Knepley PetscScalar *x = NULL; 114373d901b8SMatthew G. Knepley PetscInt i; 114473d901b8SMatthew G. Knepley 1145bbce034cSMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, cgeom[c].v0, cgeom[c].J, cgeom[c].invJ, &cgeom[c].detJ);CHKERRQ(ierr); 1146c1f031eeSMatthew G. Knepley ierr = DMPlexComputeCellGeometryFVM(dm, c, &vol[c], NULL, NULL);CHKERRQ(ierr); 1147bbce034cSMatthew G. Knepley if (cgeom[c].detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", cgeom[c].detJ, c); 114873d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, c, NULL, &x);CHKERRQ(ierr); 11490f2d7e86SMatthew G. Knepley for (i = 0; i < totDim; ++i) u[c*totDim+i] = x[i]; 115073d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, section, localX, c, NULL, &x);CHKERRQ(ierr); 115173d901b8SMatthew G. Knepley if (dmAux) { 115273d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dmAux, sectionAux, A, c, NULL, &x);CHKERRQ(ierr); 11530f2d7e86SMatthew G. Knepley for (i = 0; i < totDimAux; ++i) a[c*totDimAux+i] = x[i]; 115473d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dmAux, sectionAux, A, c, NULL, &x);CHKERRQ(ierr); 115573d901b8SMatthew G. Knepley } 115673d901b8SMatthew G. Knepley } 115773d901b8SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 1158c1f031eeSMatthew G. Knepley PetscObject obj; 1159c1f031eeSMatthew G. Knepley PetscClassId id; 1160c1f031eeSMatthew G. Knepley PetscInt numChunks, numBatches, batchSize, numBlocks, blockSize, Ne, Nr, offset; 116173d901b8SMatthew G. Knepley 1162c1f031eeSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr); 1163c1f031eeSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 1164c1f031eeSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 1165c1f031eeSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 1166c1f031eeSMatthew G. Knepley PetscQuadrature q; 1167c1f031eeSMatthew G. Knepley PetscInt Nq, Nb; 1168c1f031eeSMatthew G. Knepley 11690f2d7e86SMatthew G. Knepley ierr = PetscFEGetTileSizes(fe, NULL, &numBlocks, NULL, &numBatches);CHKERRQ(ierr); 1170c1f031eeSMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &q);CHKERRQ(ierr); 1171c1f031eeSMatthew G. Knepley ierr = PetscQuadratureGetData(q, NULL, &Nq, NULL, NULL);CHKERRQ(ierr); 1172c1f031eeSMatthew G. Knepley ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr); 1173c1f031eeSMatthew G. Knepley blockSize = Nb*Nq; 117473d901b8SMatthew G. Knepley batchSize = numBlocks * blockSize; 11750f2d7e86SMatthew G. Knepley ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr); 117673d901b8SMatthew G. Knepley numChunks = numCells / (numBatches*batchSize); 117773d901b8SMatthew G. Knepley Ne = numChunks*numBatches*batchSize; 117873d901b8SMatthew G. Knepley Nr = numCells % (numBatches*batchSize); 117973d901b8SMatthew G. Knepley offset = numCells - Nr; 1180c1f031eeSMatthew G. Knepley ierr = PetscFEIntegrate(fe, prob, f, Ne, cgeom, u, probAux, a, lintegral);CHKERRQ(ierr); 1181c1f031eeSMatthew G. Knepley ierr = PetscFEIntegrate(fe, prob, f, Nr, &cgeom[offset], &u[offset*totDim], probAux, &a[offset*totDimAux], lintegral);CHKERRQ(ierr); 1182c1f031eeSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 1183b69edc29SMatthew G. Knepley /* PetscFV fv = (PetscFV) obj; */ 1184c1f031eeSMatthew G. Knepley PetscInt foff; 1185420e96edSMatthew G. Knepley PetscPointFunc obj_func; 1186b69edc29SMatthew G. Knepley PetscScalar lint; 1187c1f031eeSMatthew G. Knepley 1188c1f031eeSMatthew G. Knepley ierr = PetscDSGetObjective(prob, f, &obj_func);CHKERRQ(ierr); 1189c1f031eeSMatthew G. Knepley ierr = PetscDSGetFieldOffset(prob, f, &foff);CHKERRQ(ierr); 1190c1f031eeSMatthew G. Knepley if (obj_func) { 1191c1f031eeSMatthew G. Knepley for (c = 0; c < numCells; ++c) { 1192c1f031eeSMatthew G. Knepley /* TODO: Need full pointwise interpolation and get centroid for x argument */ 119330b9ff8bSMatthew G. Knepley obj_func(dim, Nf, 0, NULL, NULL, &u[totDim*c+foff], NULL, NULL, NULL, NULL, NULL, NULL, NULL, 0.0, NULL, &lint); 1194b69edc29SMatthew G. Knepley lintegral[f] = PetscRealPart(lint)*vol[c]; 119573d901b8SMatthew G. Knepley } 1196c1f031eeSMatthew G. Knepley } 1197c1f031eeSMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", f); 1198c1f031eeSMatthew G. Knepley } 119973d901b8SMatthew G. Knepley if (dmAux) {ierr = PetscFree(a);CHKERRQ(ierr);} 120073d901b8SMatthew G. Knepley if (mesh->printFEM) { 120173d901b8SMatthew G. Knepley ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Local integral:");CHKERRQ(ierr); 1202c1f031eeSMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), " %g", lintegral[f]);CHKERRQ(ierr);} 120373d901b8SMatthew G. Knepley ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "\n");CHKERRQ(ierr); 120473d901b8SMatthew G. Knepley } 120573d901b8SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 1206a529e722SBarry Smith ierr = MPI_Allreduce(lintegral, integral, Nf, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject) dm));CHKERRQ(ierr); 1207c1f031eeSMatthew G. Knepley ierr = PetscFree4(lintegral,u,cgeom,vol);CHKERRQ(ierr); 1208c1f031eeSMatthew G. Knepley ierr = PetscLogEventEnd(DMPLEX_IntegralFEM,dm,0,0,0);CHKERRQ(ierr); 120973d901b8SMatthew G. Knepley PetscFunctionReturn(0); 121073d901b8SMatthew G. Knepley } 121173d901b8SMatthew G. Knepley 121273d901b8SMatthew G. Knepley #undef __FUNCT__ 1213d69c5d34SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeInterpolatorFEM" 1214d69c5d34SMatthew G. Knepley /*@ 1215d69c5d34SMatthew G. Knepley DMPlexComputeInterpolatorFEM - Form the local portion of the interpolation matrix I from the coarse DM to the uniformly refined DM. 1216d69c5d34SMatthew G. Knepley 1217d69c5d34SMatthew G. Knepley Input Parameters: 1218d69c5d34SMatthew G. Knepley + dmf - The fine mesh 1219d69c5d34SMatthew G. Knepley . dmc - The coarse mesh 1220d69c5d34SMatthew G. Knepley - user - The user context 1221d69c5d34SMatthew G. Knepley 1222d69c5d34SMatthew G. Knepley Output Parameter: 1223934789fcSMatthew G. Knepley . In - The interpolation matrix 1224d69c5d34SMatthew G. Knepley 1225d69c5d34SMatthew G. Knepley Note: 1226d69c5d34SMatthew G. Knepley The first member of the user context must be an FEMContext. 1227d69c5d34SMatthew G. Knepley 1228d69c5d34SMatthew G. Knepley We form the residual one batch of elements at a time. This allows us to offload work onto an accelerator, 1229d69c5d34SMatthew G. Knepley like a GPU, or vectorize on a multicore machine. 1230d69c5d34SMatthew G. Knepley 1231d69c5d34SMatthew G. Knepley Level: developer 1232d69c5d34SMatthew G. Knepley 1233d69c5d34SMatthew G. Knepley .seealso: DMPlexComputeJacobianFEM() 1234d69c5d34SMatthew G. Knepley @*/ 1235934789fcSMatthew G. Knepley PetscErrorCode DMPlexComputeInterpolatorFEM(DM dmc, DM dmf, Mat In, void *user) 1236d69c5d34SMatthew G. Knepley { 1237d69c5d34SMatthew G. Knepley DM_Plex *mesh = (DM_Plex *) dmc->data; 1238d69c5d34SMatthew G. Knepley const char *name = "Interpolator"; 12392764a2aaSMatthew G. Knepley PetscDS prob; 1240d69c5d34SMatthew G. Knepley PetscFE *feRef; 124197c42addSMatthew G. Knepley PetscFV *fvRef; 1242d69c5d34SMatthew G. Knepley PetscSection fsection, fglobalSection; 1243d69c5d34SMatthew G. Knepley PetscSection csection, cglobalSection; 1244d69c5d34SMatthew G. Knepley PetscScalar *elemMat; 12459ac3fadcSMatthew G. Knepley PetscInt dim, Nf, f, fieldI, fieldJ, offsetI, offsetJ, cStart, cEnd, cEndInterior, c; 12460f2d7e86SMatthew G. Knepley PetscInt cTotDim, rTotDim = 0; 1247d69c5d34SMatthew G. Knepley PetscErrorCode ierr; 1248d69c5d34SMatthew G. Knepley 1249d69c5d34SMatthew G. Knepley PetscFunctionBegin; 1250d69c5d34SMatthew G. Knepley ierr = PetscLogEventBegin(DMPLEX_InterpolatorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1251c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dmf, &dim);CHKERRQ(ierr); 1252d69c5d34SMatthew G. Knepley ierr = DMGetDefaultSection(dmf, &fsection);CHKERRQ(ierr); 1253d69c5d34SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmf, &fglobalSection);CHKERRQ(ierr); 1254d69c5d34SMatthew G. Knepley ierr = DMGetDefaultSection(dmc, &csection);CHKERRQ(ierr); 1255d69c5d34SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmc, &cglobalSection);CHKERRQ(ierr); 1256d69c5d34SMatthew G. Knepley ierr = PetscSectionGetNumFields(fsection, &Nf);CHKERRQ(ierr); 1257d69c5d34SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dmc, 0, &cStart, &cEnd);CHKERRQ(ierr); 12589ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dmc, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 12599ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 12602764a2aaSMatthew G. Knepley ierr = DMGetDS(dmf, &prob);CHKERRQ(ierr); 126197c42addSMatthew G. Knepley ierr = PetscCalloc2(Nf,&feRef,Nf,&fvRef);CHKERRQ(ierr); 1262d69c5d34SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 126397c42addSMatthew G. Knepley PetscObject obj; 126497c42addSMatthew G. Knepley PetscClassId id; 1265aa7890ccSMatthew G. Knepley PetscInt rNb = 0, Nc = 0; 1266d69c5d34SMatthew G. Knepley 126797c42addSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr); 126897c42addSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 126997c42addSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 127097c42addSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 127197c42addSMatthew G. Knepley 12720f2d7e86SMatthew G. Knepley ierr = PetscFERefine(fe, &feRef[f]);CHKERRQ(ierr); 1273d69c5d34SMatthew G. Knepley ierr = PetscFEGetDimension(feRef[f], &rNb);CHKERRQ(ierr); 12740f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 127597c42addSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 127697c42addSMatthew G. Knepley PetscFV fv = (PetscFV) obj; 127797c42addSMatthew G. Knepley PetscDualSpace Q; 127897c42addSMatthew G. Knepley 127997c42addSMatthew G. Knepley ierr = PetscFVRefine(fv, &fvRef[f]);CHKERRQ(ierr); 128097c42addSMatthew G. Knepley ierr = PetscFVGetDualSpace(fvRef[f], &Q);CHKERRQ(ierr); 128197c42addSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &rNb);CHKERRQ(ierr); 128297c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 128397c42addSMatthew G. Knepley } 12840f2d7e86SMatthew G. Knepley rTotDim += rNb*Nc; 1285d69c5d34SMatthew G. Knepley } 12862764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &cTotDim);CHKERRQ(ierr); 12870f2d7e86SMatthew G. Knepley ierr = PetscMalloc1(rTotDim*cTotDim,&elemMat);CHKERRQ(ierr); 12880f2d7e86SMatthew G. Knepley ierr = PetscMemzero(elemMat, rTotDim*cTotDim * sizeof(PetscScalar));CHKERRQ(ierr); 1289d69c5d34SMatthew G. Knepley for (fieldI = 0, offsetI = 0; fieldI < Nf; ++fieldI) { 1290d69c5d34SMatthew G. Knepley PetscDualSpace Qref; 1291d69c5d34SMatthew G. Knepley PetscQuadrature f; 1292d69c5d34SMatthew G. Knepley const PetscReal *qpoints, *qweights; 1293d69c5d34SMatthew G. Knepley PetscReal *points; 1294d69c5d34SMatthew G. Knepley PetscInt npoints = 0, Nc, Np, fpdim, i, k, p, d; 1295d69c5d34SMatthew G. Knepley 1296d69c5d34SMatthew G. Knepley /* Compose points from all dual basis functionals */ 129797c42addSMatthew G. Knepley if (feRef[fieldI]) { 1298d69c5d34SMatthew G. Knepley ierr = PetscFEGetDualSpace(feRef[fieldI], &Qref);CHKERRQ(ierr); 12990f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(feRef[fieldI], &Nc);CHKERRQ(ierr); 130097c42addSMatthew G. Knepley } else { 130197c42addSMatthew G. Knepley ierr = PetscFVGetDualSpace(fvRef[fieldI], &Qref);CHKERRQ(ierr); 130297c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fvRef[fieldI], &Nc);CHKERRQ(ierr); 130397c42addSMatthew G. Knepley } 1304d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Qref, &fpdim);CHKERRQ(ierr); 1305d69c5d34SMatthew G. Knepley for (i = 0; i < fpdim; ++i) { 1306d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1307d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, NULL, NULL);CHKERRQ(ierr); 1308d69c5d34SMatthew G. Knepley npoints += Np; 1309d69c5d34SMatthew G. Knepley } 1310d69c5d34SMatthew G. Knepley ierr = PetscMalloc1(npoints*dim,&points);CHKERRQ(ierr); 1311d69c5d34SMatthew G. Knepley for (i = 0, k = 0; i < fpdim; ++i) { 1312d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1313d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, &qpoints, NULL);CHKERRQ(ierr); 1314d69c5d34SMatthew G. Knepley for (p = 0; p < Np; ++p, ++k) for (d = 0; d < dim; ++d) points[k*dim+d] = qpoints[p*dim+d]; 1315d69c5d34SMatthew G. Knepley } 1316d69c5d34SMatthew G. Knepley 1317d69c5d34SMatthew G. Knepley for (fieldJ = 0, offsetJ = 0; fieldJ < Nf; ++fieldJ) { 131897c42addSMatthew G. Knepley PetscObject obj; 131997c42addSMatthew G. Knepley PetscClassId id; 1320d69c5d34SMatthew G. Knepley PetscReal *B; 1321aa7890ccSMatthew G. Knepley PetscInt NcJ = 0, cpdim = 0, j; 1322d69c5d34SMatthew G. Knepley 132397c42addSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, fieldJ, &obj);CHKERRQ(ierr); 132497c42addSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 132597c42addSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 132697c42addSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 1327d69c5d34SMatthew G. Knepley 1328d69c5d34SMatthew G. Knepley /* Evaluate basis at points */ 13290f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &NcJ);CHKERRQ(ierr); 13300f2d7e86SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &cpdim);CHKERRQ(ierr); 1331ffe73a53SMatthew G. Knepley /* For now, fields only interpolate themselves */ 1332ffe73a53SMatthew G. Knepley if (fieldI == fieldJ) { 13337c927364SMatthew G. Knepley if (Nc != NcJ) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components in fine space field %d does not match coarse field %d", Nc, NcJ); 13340f2d7e86SMatthew G. Knepley ierr = PetscFEGetTabulation(fe, npoints, points, &B, NULL, NULL);CHKERRQ(ierr); 1335d69c5d34SMatthew G. Knepley for (i = 0, k = 0; i < fpdim; ++i) { 1336d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1337d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, NULL, &qweights);CHKERRQ(ierr); 1338d69c5d34SMatthew G. Knepley for (p = 0; p < Np; ++p, ++k) { 133936a6d9c0SMatthew G. Knepley for (j = 0; j < cpdim; ++j) { 13400f2d7e86SMatthew G. Knepley for (c = 0; c < Nc; ++c) elemMat[(offsetI + i*Nc + c)*cTotDim + offsetJ + j*NcJ + c] += B[k*cpdim*NcJ+j*Nc+c]*qweights[p]; 134136a6d9c0SMatthew G. Knepley } 1342d69c5d34SMatthew G. Knepley } 1343d69c5d34SMatthew G. Knepley } 13440f2d7e86SMatthew G. Knepley ierr = PetscFERestoreTabulation(fe, npoints, points, &B, NULL, NULL);CHKERRQ(ierr);CHKERRQ(ierr); 1345ffe73a53SMatthew G. Knepley } 134697c42addSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 134797c42addSMatthew G. Knepley PetscFV fv = (PetscFV) obj; 134897c42addSMatthew G. Knepley 134997c42addSMatthew G. Knepley /* Evaluate constant function at points */ 135097c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &NcJ);CHKERRQ(ierr); 135197c42addSMatthew G. Knepley cpdim = 1; 135297c42addSMatthew G. Knepley /* For now, fields only interpolate themselves */ 135397c42addSMatthew G. Knepley if (fieldI == fieldJ) { 135497c42addSMatthew G. Knepley if (Nc != NcJ) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components in fine space field %d does not match coarse field %d", Nc, NcJ); 135597c42addSMatthew G. Knepley for (i = 0, k = 0; i < fpdim; ++i) { 135697c42addSMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 135797c42addSMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, NULL, &qweights);CHKERRQ(ierr); 135897c42addSMatthew G. Knepley for (p = 0; p < Np; ++p, ++k) { 135997c42addSMatthew G. Knepley for (j = 0; j < cpdim; ++j) { 136097c42addSMatthew G. Knepley for (c = 0; c < Nc; ++c) elemMat[(offsetI + i*Nc + c)*cTotDim + offsetJ + j*NcJ + c] += 1.0*qweights[p]; 136197c42addSMatthew G. Knepley } 136297c42addSMatthew G. Knepley } 136397c42addSMatthew G. Knepley } 136497c42addSMatthew G. Knepley } 136597c42addSMatthew G. Knepley } 136636a6d9c0SMatthew G. Knepley offsetJ += cpdim*NcJ; 1367d69c5d34SMatthew G. Knepley } 1368d69c5d34SMatthew G. Knepley offsetI += fpdim*Nc; 1369549a8adaSMatthew G. Knepley ierr = PetscFree(points);CHKERRQ(ierr); 1370d69c5d34SMatthew G. Knepley } 13710f2d7e86SMatthew G. Knepley if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(0, name, rTotDim, cTotDim, elemMat);CHKERRQ(ierr);} 13727f5b169aSMatthew G. Knepley /* Preallocate matrix */ 13737f5b169aSMatthew G. Knepley { 13747f5b169aSMatthew G. Knepley PetscHashJK ht; 13757f5b169aSMatthew G. Knepley PetscLayout rLayout; 13767f5b169aSMatthew G. Knepley PetscInt *dnz, *onz, *cellCIndices, *cellFIndices; 13777f5b169aSMatthew G. Knepley PetscInt locRows, rStart, rEnd, cell, r; 13787f5b169aSMatthew G. Knepley 13797f5b169aSMatthew G. Knepley ierr = MatGetLocalSize(In, &locRows, NULL);CHKERRQ(ierr); 13807f5b169aSMatthew G. Knepley ierr = PetscLayoutCreate(PetscObjectComm((PetscObject) In), &rLayout);CHKERRQ(ierr); 13817f5b169aSMatthew G. Knepley ierr = PetscLayoutSetLocalSize(rLayout, locRows);CHKERRQ(ierr); 13827f5b169aSMatthew G. Knepley ierr = PetscLayoutSetBlockSize(rLayout, 1);CHKERRQ(ierr); 13837f5b169aSMatthew G. Knepley ierr = PetscLayoutSetUp(rLayout);CHKERRQ(ierr); 13847f5b169aSMatthew G. Knepley ierr = PetscLayoutGetRange(rLayout, &rStart, &rEnd);CHKERRQ(ierr); 13857f5b169aSMatthew G. Knepley ierr = PetscLayoutDestroy(&rLayout);CHKERRQ(ierr); 13867f5b169aSMatthew G. Knepley ierr = PetscCalloc4(locRows,&dnz,locRows,&onz,cTotDim,&cellCIndices,rTotDim,&cellFIndices);CHKERRQ(ierr); 13877f5b169aSMatthew G. Knepley ierr = PetscHashJKCreate(&ht);CHKERRQ(ierr); 13887f5b169aSMatthew G. Knepley for (cell = cStart; cell < cEnd; ++cell) { 13897f5b169aSMatthew G. Knepley ierr = DMPlexMatGetClosureIndicesRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, cell, cellCIndices, cellFIndices);CHKERRQ(ierr); 13907f5b169aSMatthew G. Knepley for (r = 0; r < rTotDim; ++r) { 13917f5b169aSMatthew G. Knepley PetscHashJKKey key; 13927f5b169aSMatthew G. Knepley PetscHashJKIter missing, iter; 13937f5b169aSMatthew G. Knepley 13947f5b169aSMatthew G. Knepley key.j = cellFIndices[r]; 13957f5b169aSMatthew G. Knepley if (key.j < 0) continue; 13967f5b169aSMatthew G. Knepley for (c = 0; c < cTotDim; ++c) { 13977f5b169aSMatthew G. Knepley key.k = cellCIndices[c]; 13987f5b169aSMatthew G. Knepley if (key.k < 0) continue; 13997f5b169aSMatthew G. Knepley ierr = PetscHashJKPut(ht, key, &missing, &iter);CHKERRQ(ierr); 14007f5b169aSMatthew G. Knepley if (missing) { 14017f5b169aSMatthew G. Knepley ierr = PetscHashJKSet(ht, iter, 1);CHKERRQ(ierr); 14027f5b169aSMatthew G. Knepley if ((key.k >= rStart) && (key.k < rEnd)) ++dnz[key.j-rStart]; 14037f5b169aSMatthew G. Knepley else ++onz[key.j-rStart]; 14047f5b169aSMatthew G. Knepley } 14057f5b169aSMatthew G. Knepley } 14067f5b169aSMatthew G. Knepley } 14077f5b169aSMatthew G. Knepley } 14087f5b169aSMatthew G. Knepley ierr = PetscHashJKDestroy(&ht);CHKERRQ(ierr); 14097f5b169aSMatthew G. Knepley ierr = MatXAIJSetPreallocation(In, 1, dnz, onz, NULL, NULL);CHKERRQ(ierr); 14107f5b169aSMatthew G. Knepley ierr = MatSetOption(In, MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 14117f5b169aSMatthew G. Knepley ierr = PetscFree4(dnz,onz,cellCIndices,cellFIndices);CHKERRQ(ierr); 14127f5b169aSMatthew G. Knepley } 14137f5b169aSMatthew G. Knepley /* Fill matrix */ 14147f5b169aSMatthew G. Knepley ierr = MatZeroEntries(In);CHKERRQ(ierr); 1415d69c5d34SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 1416934789fcSMatthew G. Knepley ierr = DMPlexMatSetClosureRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, In, c, elemMat, INSERT_VALUES);CHKERRQ(ierr); 1417d69c5d34SMatthew G. Knepley } 1418549a8adaSMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscFEDestroy(&feRef[f]);CHKERRQ(ierr);} 141997c42addSMatthew G. Knepley ierr = PetscFree2(feRef,fvRef);CHKERRQ(ierr); 1420549a8adaSMatthew G. Knepley ierr = PetscFree(elemMat);CHKERRQ(ierr); 1421934789fcSMatthew G. Knepley ierr = MatAssemblyBegin(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1422934789fcSMatthew G. Knepley ierr = MatAssemblyEnd(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1423d69c5d34SMatthew G. Knepley if (mesh->printFEM) { 1424d69c5d34SMatthew G. Knepley ierr = PetscPrintf(PETSC_COMM_WORLD, "%s:\n", name);CHKERRQ(ierr); 1425934789fcSMatthew G. Knepley ierr = MatChop(In, 1.0e-10);CHKERRQ(ierr); 1426934789fcSMatthew G. Knepley ierr = MatView(In, PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 1427d69c5d34SMatthew G. Knepley } 1428d69c5d34SMatthew G. Knepley ierr = PetscLogEventEnd(DMPLEX_InterpolatorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1429d69c5d34SMatthew G. Knepley PetscFunctionReturn(0); 1430d69c5d34SMatthew G. Knepley } 14316c73c22cSMatthew G. Knepley 14326c73c22cSMatthew G. Knepley #undef __FUNCT__ 1433*4ef9d792SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeInterpolator_General" 1434*4ef9d792SMatthew G. Knepley PetscErrorCode DMPlexComputeInterpolator_General(DM dmc, DM dmf, Mat In, void *user) 1435*4ef9d792SMatthew G. Knepley { 1436*4ef9d792SMatthew G. Knepley PetscDS prob; 1437*4ef9d792SMatthew G. Knepley PetscSection fsection, csection, globalFSection, globalCSection; 1438*4ef9d792SMatthew G. Knepley PetscHashJK ht; 1439*4ef9d792SMatthew G. Knepley PetscLayout rLayout; 1440*4ef9d792SMatthew G. Knepley PetscInt *dnz, *onz; 1441*4ef9d792SMatthew G. Knepley PetscInt locRows, rStart, rEnd; 1442*4ef9d792SMatthew G. Knepley PetscReal *x, *v0, *J, *invJ, detJ; 1443*4ef9d792SMatthew G. Knepley PetscReal *v0c, *Jc, *invJc, detJc; 1444*4ef9d792SMatthew G. Knepley PetscScalar *elemMat; 1445*4ef9d792SMatthew G. Knepley PetscInt dim, Nf, field, totDim, cStart, cEnd, cell, ccell; 1446*4ef9d792SMatthew G. Knepley PetscErrorCode ierr; 1447*4ef9d792SMatthew G. Knepley 1448*4ef9d792SMatthew G. Knepley PetscFunctionBegin; 1449*4ef9d792SMatthew G. Knepley ierr = DMGetCoordinateDim(dmc, &dim);CHKERRQ(ierr); 1450*4ef9d792SMatthew G. Knepley ierr = DMGetDS(dmc, &prob);CHKERRQ(ierr); 1451*4ef9d792SMatthew G. Knepley ierr = PetscDSGetRefCoordArrays(prob, &x, NULL);CHKERRQ(ierr); 1452*4ef9d792SMatthew G. Knepley ierr = PetscDSGetNumFields(prob, &Nf);CHKERRQ(ierr); 1453*4ef9d792SMatthew G. Knepley ierr = PetscMalloc3(dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 1454*4ef9d792SMatthew G. Knepley ierr = PetscMalloc3(dim,&v0c,dim*dim,&Jc,dim*dim,&invJc);CHKERRQ(ierr); 1455*4ef9d792SMatthew G. Knepley ierr = DMGetDefaultSection(dmf, &fsection);CHKERRQ(ierr); 1456*4ef9d792SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmf, &globalFSection);CHKERRQ(ierr); 1457*4ef9d792SMatthew G. Knepley ierr = DMGetDefaultSection(dmc, &csection);CHKERRQ(ierr); 1458*4ef9d792SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmc, &globalCSection);CHKERRQ(ierr); 1459*4ef9d792SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dmf, 0, &cStart, &cEnd);CHKERRQ(ierr); 1460*4ef9d792SMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 1461*4ef9d792SMatthew G. Knepley ierr = PetscMalloc1(totDim*totDim, &elemMat);CHKERRQ(ierr); 1462*4ef9d792SMatthew G. Knepley 1463*4ef9d792SMatthew G. Knepley ierr = MatGetLocalSize(In, &locRows, NULL);CHKERRQ(ierr); 1464*4ef9d792SMatthew G. Knepley ierr = PetscLayoutCreate(PetscObjectComm((PetscObject) In), &rLayout);CHKERRQ(ierr); 1465*4ef9d792SMatthew G. Knepley ierr = PetscLayoutSetLocalSize(rLayout, locRows);CHKERRQ(ierr); 1466*4ef9d792SMatthew G. Knepley ierr = PetscLayoutSetBlockSize(rLayout, 1);CHKERRQ(ierr); 1467*4ef9d792SMatthew G. Knepley ierr = PetscLayoutSetUp(rLayout);CHKERRQ(ierr); 1468*4ef9d792SMatthew G. Knepley ierr = PetscLayoutGetRange(rLayout, &rStart, &rEnd);CHKERRQ(ierr); 1469*4ef9d792SMatthew G. Knepley ierr = PetscLayoutDestroy(&rLayout);CHKERRQ(ierr); 1470*4ef9d792SMatthew G. Knepley ierr = PetscCalloc2(locRows,&dnz,locRows,&onz);CHKERRQ(ierr); 1471*4ef9d792SMatthew G. Knepley ierr = PetscHashJKCreate(&ht);CHKERRQ(ierr); 1472*4ef9d792SMatthew G. Knepley for (field = 0; field < Nf; ++field) { 1473*4ef9d792SMatthew G. Knepley PetscObject obj; 1474*4ef9d792SMatthew G. Knepley PetscClassId id; 1475*4ef9d792SMatthew G. Knepley PetscDualSpace Q; 1476*4ef9d792SMatthew G. Knepley PetscQuadrature f; 1477*4ef9d792SMatthew G. Knepley const PetscReal *qpoints, *qweights; 1478*4ef9d792SMatthew G. Knepley PetscInt npoints = 0, Nc, Np, fpdim, i, p, d; 1479*4ef9d792SMatthew G. Knepley 1480*4ef9d792SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, &obj);CHKERRQ(ierr); 1481*4ef9d792SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 1482*4ef9d792SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 1483*4ef9d792SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 1484*4ef9d792SMatthew G. Knepley 1485*4ef9d792SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &Q);CHKERRQ(ierr); 1486*4ef9d792SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 1487*4ef9d792SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 1488*4ef9d792SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 1489*4ef9d792SMatthew G. Knepley 1490*4ef9d792SMatthew G. Knepley ierr = PetscFVGetDualSpace(fv, &Q);CHKERRQ(ierr); 1491*4ef9d792SMatthew G. Knepley Nc = 1; 1492*4ef9d792SMatthew G. Knepley } 1493*4ef9d792SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &fpdim);CHKERRQ(ierr); 1494*4ef9d792SMatthew G. Knepley /* For each fine grid cell */ 1495*4ef9d792SMatthew G. Knepley for (cell = cStart; cell < cEnd; ++cell) { 1496*4ef9d792SMatthew G. Knepley PetscInt *findices, *cindices; 1497*4ef9d792SMatthew G. Knepley PetscInt numFIndices, numCIndices; 1498*4ef9d792SMatthew G. Knepley 1499*4ef9d792SMatthew G. Knepley ierr = DMPlexGetClosureIndices(dmf, fsection, globalFSection, cell, &numFIndices, &findices);CHKERRQ(ierr);CHKERRQ(ierr); 1500*4ef9d792SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dmf, cell, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 1501*4ef9d792SMatthew G. Knepley if (numFIndices != fpdim*Nc) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of fine indices %d != %d dual basis vecs", numFIndices, fpdim*Nc); 1502*4ef9d792SMatthew G. Knepley for (i = 0; i < fpdim; ++i) { 1503*4ef9d792SMatthew G. Knepley Vec pointVec; 1504*4ef9d792SMatthew G. Knepley PetscScalar *pV; 1505*4ef9d792SMatthew G. Knepley IS coarseCellIS; 1506*4ef9d792SMatthew G. Knepley const PetscInt *coarseCells; 1507*4ef9d792SMatthew G. Knepley PetscInt numCoarseCells, q, r, c; 1508*4ef9d792SMatthew G. Knepley 1509*4ef9d792SMatthew G. Knepley /* Get points from the dual basis functional quadrature */ 1510*4ef9d792SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Q, i, &f);CHKERRQ(ierr); 1511*4ef9d792SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, &qpoints, NULL);CHKERRQ(ierr); 1512*4ef9d792SMatthew G. Knepley ierr = VecCreateSeq(PETSC_COMM_SELF, Np*dim, &pointVec);CHKERRQ(ierr); 1513*4ef9d792SMatthew G. Knepley ierr = VecSetBlockSize(pointVec, dim);CHKERRQ(ierr); 1514*4ef9d792SMatthew G. Knepley ierr = VecGetArray(pointVec, &pV);CHKERRQ(ierr); 1515*4ef9d792SMatthew G. Knepley for (q = 0; q < Np; ++q) { 1516*4ef9d792SMatthew G. Knepley /* Transform point to real space */ 1517*4ef9d792SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &qpoints[q*dim], x); 1518*4ef9d792SMatthew G. Knepley for (d = 0; d < dim; ++d) pV[q*dim+d] = x[d]; 1519*4ef9d792SMatthew G. Knepley } 1520*4ef9d792SMatthew G. Knepley ierr = VecRestoreArray(pointVec, &pV);CHKERRQ(ierr); 1521*4ef9d792SMatthew G. Knepley /* Get set of coarse cells that overlap points (would like to group points by coarse cell) */ 1522*4ef9d792SMatthew G. Knepley ierr = DMLocatePoints(dmc, pointVec, &coarseCellIS);CHKERRQ(ierr); 1523*4ef9d792SMatthew G. Knepley ierr = ISViewFromOptions(coarseCellIS, NULL, "-interp_is_view");CHKERRQ(ierr); 1524*4ef9d792SMatthew G. Knepley /* Update preallocation info */ 1525*4ef9d792SMatthew G. Knepley ierr = ISGetLocalSize(coarseCellIS, &numCoarseCells);CHKERRQ(ierr); 1526*4ef9d792SMatthew G. Knepley ierr = ISGetIndices(coarseCellIS, &coarseCells);CHKERRQ(ierr); 1527*4ef9d792SMatthew G. Knepley for (r = 0; r < Nc; ++r) { 1528*4ef9d792SMatthew G. Knepley PetscHashJKKey key; 1529*4ef9d792SMatthew G. Knepley PetscHashJKIter missing, iter; 1530*4ef9d792SMatthew G. Knepley 1531*4ef9d792SMatthew G. Knepley key.j = findices[i*Nc+r]; 1532*4ef9d792SMatthew G. Knepley if (key.j < 0) continue; 1533*4ef9d792SMatthew G. Knepley /* Get indices for coarse elements */ 1534*4ef9d792SMatthew G. Knepley for (ccell = 0; ccell < numCoarseCells; ++ccell) { 1535*4ef9d792SMatthew G. Knepley ierr = DMPlexGetClosureIndices(dmc, csection, globalCSection, coarseCells[ccell], &numCIndices, &cindices);CHKERRQ(ierr);CHKERRQ(ierr); 1536*4ef9d792SMatthew G. Knepley for (c = 0; c < numCIndices; ++c) { 1537*4ef9d792SMatthew G. Knepley key.k = cindices[c]; 1538*4ef9d792SMatthew G. Knepley if (key.k < 0) continue; 1539*4ef9d792SMatthew G. Knepley ierr = PetscHashJKPut(ht, key, &missing, &iter);CHKERRQ(ierr); 1540*4ef9d792SMatthew G. Knepley if (missing) { 1541*4ef9d792SMatthew G. Knepley ierr = PetscHashJKSet(ht, iter, 1);CHKERRQ(ierr); 1542*4ef9d792SMatthew G. Knepley if ((key.k >= rStart) && (key.k < rEnd)) ++dnz[key.j-rStart]; 1543*4ef9d792SMatthew G. Knepley else ++onz[key.j-rStart]; 1544*4ef9d792SMatthew G. Knepley } 1545*4ef9d792SMatthew G. Knepley } 1546*4ef9d792SMatthew G. Knepley ierr = DMPlexRestoreClosureIndices(dmc, csection, globalCSection, coarseCells[ccell], &numCIndices, &cindices);CHKERRQ(ierr);CHKERRQ(ierr); 1547*4ef9d792SMatthew G. Knepley } 1548*4ef9d792SMatthew G. Knepley } 1549*4ef9d792SMatthew G. Knepley ierr = ISRestoreIndices(coarseCellIS, &coarseCells);CHKERRQ(ierr); 1550*4ef9d792SMatthew G. Knepley ierr = ISDestroy(&coarseCellIS);CHKERRQ(ierr); 1551*4ef9d792SMatthew G. Knepley ierr = VecDestroy(&pointVec);CHKERRQ(ierr); 1552*4ef9d792SMatthew G. Knepley } 1553*4ef9d792SMatthew G. Knepley ierr = DMPlexRestoreClosureIndices(dmf, fsection, globalFSection, cell, &numFIndices, &findices);CHKERRQ(ierr);CHKERRQ(ierr); 1554*4ef9d792SMatthew G. Knepley } 1555*4ef9d792SMatthew G. Knepley } 1556*4ef9d792SMatthew G. Knepley ierr = PetscHashJKDestroy(&ht);CHKERRQ(ierr); 1557*4ef9d792SMatthew G. Knepley ierr = MatXAIJSetPreallocation(In, 1, dnz, onz, NULL, NULL);CHKERRQ(ierr); 1558*4ef9d792SMatthew G. Knepley ierr = MatSetOption(In, MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 1559*4ef9d792SMatthew G. Knepley ierr = PetscFree2(dnz,onz);CHKERRQ(ierr); 1560*4ef9d792SMatthew G. Knepley for (field = 0; field < Nf; ++field) { 1561*4ef9d792SMatthew G. Knepley PetscObject obj; 1562*4ef9d792SMatthew G. Knepley PetscClassId id; 1563*4ef9d792SMatthew G. Knepley PetscDualSpace Q; 1564*4ef9d792SMatthew G. Knepley PetscQuadrature f; 1565*4ef9d792SMatthew G. Knepley const PetscReal *qpoints, *qweights; 1566*4ef9d792SMatthew G. Knepley PetscInt npoints = 0, Nc, Np, fpdim, i, p, d; 1567*4ef9d792SMatthew G. Knepley 1568*4ef9d792SMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, &obj);CHKERRQ(ierr); 1569*4ef9d792SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 1570*4ef9d792SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 1571*4ef9d792SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 1572*4ef9d792SMatthew G. Knepley 1573*4ef9d792SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &Q);CHKERRQ(ierr); 1574*4ef9d792SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 1575*4ef9d792SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 1576*4ef9d792SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 1577*4ef9d792SMatthew G. Knepley 1578*4ef9d792SMatthew G. Knepley ierr = PetscFVGetDualSpace(fv, &Q);CHKERRQ(ierr); 1579*4ef9d792SMatthew G. Knepley Nc = 1; 1580*4ef9d792SMatthew G. Knepley } 1581*4ef9d792SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &fpdim);CHKERRQ(ierr); 1582*4ef9d792SMatthew G. Knepley /* For each fine grid cell */ 1583*4ef9d792SMatthew G. Knepley for (cell = cStart; cell < cEnd; ++cell) { 1584*4ef9d792SMatthew G. Knepley PetscInt *findices, *cindices; 1585*4ef9d792SMatthew G. Knepley PetscInt numFIndices, numCIndices; 1586*4ef9d792SMatthew G. Knepley 1587*4ef9d792SMatthew G. Knepley ierr = DMPlexGetClosureIndices(dmf, fsection, globalFSection, cell, &numFIndices, &findices);CHKERRQ(ierr);CHKERRQ(ierr); 1588*4ef9d792SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dmf, cell, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 1589*4ef9d792SMatthew G. Knepley if (numFIndices != fpdim*Nc) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of fine indices %d != %d dual basis vecs", numFIndices, fpdim*Nc); 1590*4ef9d792SMatthew G. Knepley for (i = 0; i < fpdim; ++i) { 1591*4ef9d792SMatthew G. Knepley Vec pointVec; 1592*4ef9d792SMatthew G. Knepley PetscScalar *pV; 1593*4ef9d792SMatthew G. Knepley IS coarseCellIS; 1594*4ef9d792SMatthew G. Knepley const PetscInt *coarseCells; 1595*4ef9d792SMatthew G. Knepley PetscInt numCoarseCells, cpdim, q, r, c, j; 1596*4ef9d792SMatthew G. Knepley 1597*4ef9d792SMatthew G. Knepley /* Get points from the dual basis functional quadrature */ 1598*4ef9d792SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Q, i, &f);CHKERRQ(ierr); 1599*4ef9d792SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, &qpoints, &qweights);CHKERRQ(ierr); 1600*4ef9d792SMatthew G. Knepley ierr = VecCreateSeq(PETSC_COMM_SELF, Np*dim, &pointVec);CHKERRQ(ierr); 1601*4ef9d792SMatthew G. Knepley ierr = VecSetBlockSize(pointVec, dim);CHKERRQ(ierr); 1602*4ef9d792SMatthew G. Knepley ierr = VecGetArray(pointVec, &pV);CHKERRQ(ierr); 1603*4ef9d792SMatthew G. Knepley for (q = 0; q < Np; ++q) { 1604*4ef9d792SMatthew G. Knepley /* Transform point to real space */ 1605*4ef9d792SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &qpoints[q*dim], x); 1606*4ef9d792SMatthew G. Knepley for (d = 0; d < dim; ++d) pV[q*dim+d] = x[d]; 1607*4ef9d792SMatthew G. Knepley } 1608*4ef9d792SMatthew G. Knepley ierr = VecRestoreArray(pointVec, &pV);CHKERRQ(ierr); 1609*4ef9d792SMatthew G. Knepley /* Get set of coarse cells that overlap points (would like to group points by coarse cell) */ 1610*4ef9d792SMatthew G. Knepley ierr = DMLocatePoints(dmc, pointVec, &coarseCellIS);CHKERRQ(ierr); 1611*4ef9d792SMatthew G. Knepley /* Update preallocation info */ 1612*4ef9d792SMatthew G. Knepley ierr = ISGetLocalSize(coarseCellIS, &numCoarseCells);CHKERRQ(ierr); 1613*4ef9d792SMatthew G. Knepley ierr = ISGetIndices(coarseCellIS, &coarseCells);CHKERRQ(ierr); 1614*4ef9d792SMatthew G. Knepley ierr = VecGetArray(pointVec, &pV);CHKERRQ(ierr); 1615*4ef9d792SMatthew G. Knepley for (ccell = 0; ccell < numCoarseCells; ++ccell) { 1616*4ef9d792SMatthew G. Knepley ierr = DMPlexGetClosureIndices(dmc, csection, globalCSection, coarseCells[ccell], &numCIndices, &cindices);CHKERRQ(ierr);CHKERRQ(ierr); 1617*4ef9d792SMatthew G. Knepley /* Transform points from real space to coarse reference space */ 1618*4ef9d792SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dmc, ccell, NULL, v0c, Jc, invJc, &detJc);CHKERRQ(ierr); 1619*4ef9d792SMatthew G. Knepley CoordinatesRealToRef(dim, dim, v0c, invJc, &pV[ccell*dim], x); 1620*4ef9d792SMatthew G. Knepley 1621*4ef9d792SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 1622*4ef9d792SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 1623*4ef9d792SMatthew G. Knepley PetscReal *B; 1624*4ef9d792SMatthew G. Knepley 1625*4ef9d792SMatthew G. Knepley /* Evaluate coarse basis on contained point */ 1626*4ef9d792SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &cpdim);CHKERRQ(ierr); 1627*4ef9d792SMatthew G. Knepley ierr = PetscFEGetTabulation(fe, 1, x, &B, NULL, NULL);CHKERRQ(ierr); 1628*4ef9d792SMatthew G. Knepley /* Get elemMat entries by multiplying by weight */ 1629*4ef9d792SMatthew G. Knepley for (j = 0; j < cpdim; ++j) { 1630*4ef9d792SMatthew G. Knepley for (c = 0; c < Nc; ++c) elemMat[(c*cpdim + j)*Nc + c] = B[j*Nc + c]*qweights[ccell]; 1631*4ef9d792SMatthew G. Knepley } 1632*4ef9d792SMatthew G. Knepley ierr = PetscFERestoreTabulation(fe, 1, x, &B, NULL, NULL);CHKERRQ(ierr);CHKERRQ(ierr); 1633*4ef9d792SMatthew G. Knepley } else { 1634*4ef9d792SMatthew G. Knepley cpdim = 1; 1635*4ef9d792SMatthew G. Knepley for (j = 0; j < cpdim; ++j) { 1636*4ef9d792SMatthew G. Knepley for (c = 0; c < Nc; ++c) elemMat[(c*cpdim + j)*Nc + c] = 1.0*qweights[ccell]; 1637*4ef9d792SMatthew G. Knepley } 1638*4ef9d792SMatthew G. Knepley } 1639*4ef9d792SMatthew G. Knepley /* Update interpolator */ 1640*4ef9d792SMatthew G. Knepley ierr = MatSetValues(In, Nc, &findices[i*Nc], numCIndices, cindices, elemMat, INSERT_VALUES);CHKERRQ(ierr); 1641*4ef9d792SMatthew G. Knepley ierr = DMPlexRestoreClosureIndices(dmc, csection, globalCSection, coarseCells[ccell], &numCIndices, &cindices);CHKERRQ(ierr);CHKERRQ(ierr); 1642*4ef9d792SMatthew G. Knepley } 1643*4ef9d792SMatthew G. Knepley ierr = VecRestoreArray(pointVec, &pV);CHKERRQ(ierr); 1644*4ef9d792SMatthew G. Knepley ierr = ISRestoreIndices(coarseCellIS, &coarseCells);CHKERRQ(ierr); 1645*4ef9d792SMatthew G. Knepley ierr = ISDestroy(&coarseCellIS);CHKERRQ(ierr); 1646*4ef9d792SMatthew G. Knepley ierr = VecDestroy(&pointVec);CHKERRQ(ierr); 1647*4ef9d792SMatthew G. Knepley } 1648*4ef9d792SMatthew G. Knepley ierr = DMPlexRestoreClosureIndices(dmf, fsection, globalFSection, cell, &numFIndices, &findices);CHKERRQ(ierr);CHKERRQ(ierr); 1649*4ef9d792SMatthew G. Knepley } 1650*4ef9d792SMatthew G. Knepley } 1651*4ef9d792SMatthew G. Knepley ierr = PetscFree3(v0,J,invJ);CHKERRQ(ierr); 1652*4ef9d792SMatthew G. Knepley ierr = PetscFree3(v0c,Jc,invJc);CHKERRQ(ierr); 1653*4ef9d792SMatthew G. Knepley ierr = PetscFree(elemMat);CHKERRQ(ierr); 1654*4ef9d792SMatthew G. Knepley ierr = MatAssemblyBegin(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1655*4ef9d792SMatthew G. Knepley ierr = MatAssemblyEnd(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1656*4ef9d792SMatthew G. Knepley PetscFunctionReturn(0); 1657*4ef9d792SMatthew G. Knepley } 1658*4ef9d792SMatthew G. Knepley 1659*4ef9d792SMatthew G. Knepley #undef __FUNCT__ 16607c927364SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeInjectorFEM" 16617c927364SMatthew G. Knepley PetscErrorCode DMPlexComputeInjectorFEM(DM dmc, DM dmf, VecScatter *sc, void *user) 16627c927364SMatthew G. Knepley { 1663e9d4ef1bSMatthew G. Knepley PetscDS prob; 16647c927364SMatthew G. Knepley PetscFE *feRef; 166597c42addSMatthew G. Knepley PetscFV *fvRef; 16667c927364SMatthew G. Knepley Vec fv, cv; 16677c927364SMatthew G. Knepley IS fis, cis; 16687c927364SMatthew G. Knepley PetscSection fsection, fglobalSection, csection, cglobalSection; 16697c927364SMatthew G. Knepley PetscInt *cmap, *cellCIndices, *cellFIndices, *cindices, *findices; 16709ac3fadcSMatthew G. Knepley PetscInt cTotDim, fTotDim = 0, Nf, f, field, cStart, cEnd, cEndInterior, c, dim, d, startC, offsetC, offsetF, m; 16717c927364SMatthew G. Knepley PetscErrorCode ierr; 16727c927364SMatthew G. Knepley 16737c927364SMatthew G. Knepley PetscFunctionBegin; 167475a69067SMatthew G. Knepley ierr = PetscLogEventBegin(DMPLEX_InjectorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1675c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dmf, &dim);CHKERRQ(ierr); 16767c927364SMatthew G. Knepley ierr = DMGetDefaultSection(dmf, &fsection);CHKERRQ(ierr); 16777c927364SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmf, &fglobalSection);CHKERRQ(ierr); 16787c927364SMatthew G. Knepley ierr = DMGetDefaultSection(dmc, &csection);CHKERRQ(ierr); 16797c927364SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmc, &cglobalSection);CHKERRQ(ierr); 16807c927364SMatthew G. Knepley ierr = PetscSectionGetNumFields(fsection, &Nf);CHKERRQ(ierr); 16817c927364SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dmc, 0, &cStart, &cEnd);CHKERRQ(ierr); 16829ac3fadcSMatthew G. Knepley ierr = DMPlexGetHybridBounds(dmc, &cEndInterior, NULL, NULL, NULL);CHKERRQ(ierr); 16839ac3fadcSMatthew G. Knepley cEnd = cEndInterior < 0 ? cEnd : cEndInterior; 1684e9d4ef1bSMatthew G. Knepley ierr = DMGetDS(dmc, &prob);CHKERRQ(ierr); 168597c42addSMatthew G. Knepley ierr = PetscCalloc2(Nf,&feRef,Nf,&fvRef);CHKERRQ(ierr); 16867c927364SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 168797c42addSMatthew G. Knepley PetscObject obj; 168897c42addSMatthew G. Knepley PetscClassId id; 1689aa7890ccSMatthew G. Knepley PetscInt fNb = 0, Nc = 0; 16907c927364SMatthew G. Knepley 169197c42addSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr); 169297c42addSMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 169397c42addSMatthew G. Knepley if (id == PETSCFE_CLASSID) { 169497c42addSMatthew G. Knepley PetscFE fe = (PetscFE) obj; 169597c42addSMatthew G. Knepley 16967c927364SMatthew G. Knepley ierr = PetscFERefine(fe, &feRef[f]);CHKERRQ(ierr); 16977c927364SMatthew G. Knepley ierr = PetscFEGetDimension(feRef[f], &fNb);CHKERRQ(ierr); 16987c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 169997c42addSMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 170097c42addSMatthew G. Knepley PetscFV fv = (PetscFV) obj; 170197c42addSMatthew G. Knepley PetscDualSpace Q; 170297c42addSMatthew G. Knepley 170397c42addSMatthew G. Knepley ierr = PetscFVRefine(fv, &fvRef[f]);CHKERRQ(ierr); 170497c42addSMatthew G. Knepley ierr = PetscFVGetDualSpace(fvRef[f], &Q);CHKERRQ(ierr); 170597c42addSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Q, &fNb);CHKERRQ(ierr); 170697c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 170797c42addSMatthew G. Knepley } 17087c927364SMatthew G. Knepley fTotDim += fNb*Nc; 17097c927364SMatthew G. Knepley } 1710e9d4ef1bSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &cTotDim);CHKERRQ(ierr); 17117c927364SMatthew G. Knepley ierr = PetscMalloc1(cTotDim,&cmap);CHKERRQ(ierr); 17127c927364SMatthew G. Knepley for (field = 0, offsetC = 0, offsetF = 0; field < Nf; ++field) { 17137c927364SMatthew G. Knepley PetscFE feC; 171497c42addSMatthew G. Knepley PetscFV fvC; 17157c927364SMatthew G. Knepley PetscDualSpace QF, QC; 17167c927364SMatthew G. Knepley PetscInt NcF, NcC, fpdim, cpdim; 17177c927364SMatthew G. Knepley 171897c42addSMatthew G. Knepley if (feRef[field]) { 1719e9d4ef1bSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &feC);CHKERRQ(ierr); 17207c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(feC, &NcC);CHKERRQ(ierr); 17217c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(feRef[field], &NcF);CHKERRQ(ierr); 17227c927364SMatthew G. Knepley ierr = PetscFEGetDualSpace(feRef[field], &QF);CHKERRQ(ierr); 17237c927364SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QF, &fpdim);CHKERRQ(ierr); 17247c927364SMatthew G. Knepley ierr = PetscFEGetDualSpace(feC, &QC);CHKERRQ(ierr); 17257c927364SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QC, &cpdim);CHKERRQ(ierr); 172697c42addSMatthew G. Knepley } else { 172797c42addSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fvC);CHKERRQ(ierr); 172897c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fvC, &NcC);CHKERRQ(ierr); 172997c42addSMatthew G. Knepley ierr = PetscFVGetNumComponents(fvRef[field], &NcF);CHKERRQ(ierr); 173097c42addSMatthew G. Knepley ierr = PetscFVGetDualSpace(fvRef[field], &QF);CHKERRQ(ierr); 173197c42addSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QF, &fpdim);CHKERRQ(ierr); 173297c42addSMatthew G. Knepley ierr = PetscFVGetDualSpace(fvC, &QC);CHKERRQ(ierr); 173397c42addSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QC, &cpdim);CHKERRQ(ierr); 173497c42addSMatthew G. Knepley } 173597c42addSMatthew G. Knepley if (NcF != NcC) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components in fine space field %d does not match coarse field %d", NcF, NcC); 17367c927364SMatthew G. Knepley for (c = 0; c < cpdim; ++c) { 17377c927364SMatthew G. Knepley PetscQuadrature cfunc; 17387c927364SMatthew G. Knepley const PetscReal *cqpoints; 17397c927364SMatthew G. Knepley PetscInt NpC; 174097c42addSMatthew G. Knepley PetscBool found = PETSC_FALSE; 17417c927364SMatthew G. Knepley 17427c927364SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(QC, c, &cfunc);CHKERRQ(ierr); 17437c927364SMatthew G. Knepley ierr = PetscQuadratureGetData(cfunc, NULL, &NpC, &cqpoints, NULL);CHKERRQ(ierr); 174497c42addSMatthew G. Knepley if (NpC != 1 && feRef[field]) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Do not know how to do injection for moments"); 17457c927364SMatthew G. Knepley for (f = 0; f < fpdim; ++f) { 17467c927364SMatthew G. Knepley PetscQuadrature ffunc; 17477c927364SMatthew G. Knepley const PetscReal *fqpoints; 17487c927364SMatthew G. Knepley PetscReal sum = 0.0; 17497c927364SMatthew G. Knepley PetscInt NpF, comp; 17507c927364SMatthew G. Knepley 17517c927364SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(QF, f, &ffunc);CHKERRQ(ierr); 17527c927364SMatthew G. Knepley ierr = PetscQuadratureGetData(ffunc, NULL, &NpF, &fqpoints, NULL);CHKERRQ(ierr); 17537c927364SMatthew G. Knepley if (NpC != NpF) continue; 17547c927364SMatthew G. Knepley for (d = 0; d < dim; ++d) sum += PetscAbsReal(cqpoints[d] - fqpoints[d]); 17557c927364SMatthew G. Knepley if (sum > 1.0e-9) continue; 17567c927364SMatthew G. Knepley for (comp = 0; comp < NcC; ++comp) { 17577c927364SMatthew G. Knepley cmap[(offsetC+c)*NcC+comp] = (offsetF+f)*NcF+comp; 17587c927364SMatthew G. Knepley } 175997c42addSMatthew G. Knepley found = PETSC_TRUE; 17607c927364SMatthew G. Knepley break; 17617c927364SMatthew G. Knepley } 176297c42addSMatthew G. Knepley if (!found) { 176397c42addSMatthew G. Knepley /* TODO We really want the average here, but some asshole put VecScatter in the interface */ 176497c42addSMatthew G. Knepley if (fvRef[field]) { 176597c42addSMatthew G. Knepley PetscInt comp; 176697c42addSMatthew G. Knepley for (comp = 0; comp < NcC; ++comp) { 176797c42addSMatthew G. Knepley cmap[(offsetC+c)*NcC+comp] = (offsetF+0)*NcF+comp; 176897c42addSMatthew G. Knepley } 176997c42addSMatthew G. Knepley } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Could not locate matching functional for injection"); 177097c42addSMatthew G. Knepley } 17717c927364SMatthew G. Knepley } 17727c927364SMatthew G. Knepley offsetC += cpdim*NcC; 17737c927364SMatthew G. Knepley offsetF += fpdim*NcF; 17747c927364SMatthew G. Knepley } 177597c42addSMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscFEDestroy(&feRef[f]);CHKERRQ(ierr);ierr = PetscFVDestroy(&fvRef[f]);CHKERRQ(ierr);} 177697c42addSMatthew G. Knepley ierr = PetscFree2(feRef,fvRef);CHKERRQ(ierr); 17777c927364SMatthew G. Knepley 17787c927364SMatthew G. Knepley ierr = DMGetGlobalVector(dmf, &fv);CHKERRQ(ierr); 17797c927364SMatthew G. Knepley ierr = DMGetGlobalVector(dmc, &cv);CHKERRQ(ierr); 17807c927364SMatthew G. Knepley ierr = VecGetOwnershipRange(cv, &startC, NULL);CHKERRQ(ierr); 17817c927364SMatthew G. Knepley ierr = PetscSectionGetConstrainedStorageSize(cglobalSection, &m);CHKERRQ(ierr); 17827c927364SMatthew G. Knepley ierr = PetscMalloc2(cTotDim,&cellCIndices,fTotDim,&cellFIndices);CHKERRQ(ierr); 1783aa7da3c4SMatthew G. Knepley ierr = PetscMalloc1(m,&cindices);CHKERRQ(ierr); 1784aa7da3c4SMatthew G. Knepley ierr = PetscMalloc1(m,&findices);CHKERRQ(ierr); 17857c927364SMatthew G. Knepley for (d = 0; d < m; ++d) cindices[d] = findices[d] = -1; 17867c927364SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 17877c927364SMatthew G. Knepley ierr = DMPlexMatGetClosureIndicesRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, c, cellCIndices, cellFIndices);CHKERRQ(ierr); 17887c927364SMatthew G. Knepley for (d = 0; d < cTotDim; ++d) { 17897c927364SMatthew G. Knepley if (cellCIndices[d] < 0) continue; 17907c927364SMatthew G. Knepley if ((findices[cellCIndices[d]-startC] >= 0) && (findices[cellCIndices[d]-startC] != cellFIndices[cmap[d]])) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Coarse dof %d maps to both %d and %d", cindices[cellCIndices[d]-startC], findices[cellCIndices[d]-startC], cellFIndices[cmap[d]]); 17917c927364SMatthew G. Knepley cindices[cellCIndices[d]-startC] = cellCIndices[d]; 17927c927364SMatthew G. Knepley findices[cellCIndices[d]-startC] = cellFIndices[cmap[d]]; 17937c927364SMatthew G. Knepley } 17947c927364SMatthew G. Knepley } 17957c927364SMatthew G. Knepley ierr = PetscFree(cmap);CHKERRQ(ierr); 17967c927364SMatthew G. Knepley ierr = PetscFree2(cellCIndices,cellFIndices);CHKERRQ(ierr); 17977c927364SMatthew G. Knepley 17987c927364SMatthew G. Knepley ierr = ISCreateGeneral(PETSC_COMM_SELF, m, cindices, PETSC_OWN_POINTER, &cis);CHKERRQ(ierr); 17997c927364SMatthew G. Knepley ierr = ISCreateGeneral(PETSC_COMM_SELF, m, findices, PETSC_OWN_POINTER, &fis);CHKERRQ(ierr); 18007c927364SMatthew G. Knepley ierr = VecScatterCreate(cv, cis, fv, fis, sc);CHKERRQ(ierr); 18017c927364SMatthew G. Knepley ierr = ISDestroy(&cis);CHKERRQ(ierr); 18027c927364SMatthew G. Knepley ierr = ISDestroy(&fis);CHKERRQ(ierr); 18037c927364SMatthew G. Knepley ierr = DMRestoreGlobalVector(dmf, &fv);CHKERRQ(ierr); 18047c927364SMatthew G. Knepley ierr = DMRestoreGlobalVector(dmc, &cv);CHKERRQ(ierr); 180575a69067SMatthew G. Knepley ierr = PetscLogEventEnd(DMPLEX_InjectorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1806cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 1807cb1e1211SMatthew G Knepley } 1808