1af0996ceSBarry Smith #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 2d9deefdfSMatthew G. Knepley 3d9deefdfSMatthew G. Knepley PetscErrorCode DMPlexInvertCell_Internal(PetscInt dim, PetscInt numCorners, PetscInt cone[]) 4d9deefdfSMatthew G. Knepley { 5d9deefdfSMatthew G. Knepley int tmpc; 6d9deefdfSMatthew G. Knepley 7d9deefdfSMatthew G. Knepley PetscFunctionBegin; 8d9deefdfSMatthew G. Knepley if (dim != 3) PetscFunctionReturn(0); 9d9deefdfSMatthew G. Knepley switch (numCorners) { 10d9deefdfSMatthew G. Knepley case 4: 11d9deefdfSMatthew G. Knepley tmpc = cone[0]; 12d9deefdfSMatthew G. Knepley cone[0] = cone[1]; 13d9deefdfSMatthew G. Knepley cone[1] = tmpc; 14d9deefdfSMatthew G. Knepley break; 15d9deefdfSMatthew G. Knepley case 8: 16d9deefdfSMatthew G. Knepley tmpc = cone[1]; 17d9deefdfSMatthew G. Knepley cone[1] = cone[3]; 18d9deefdfSMatthew G. Knepley cone[3] = tmpc; 19d9deefdfSMatthew G. Knepley break; 20d9deefdfSMatthew G. Knepley default: break; 21d9deefdfSMatthew G. Knepley } 22d9deefdfSMatthew G. Knepley PetscFunctionReturn(0); 23d9deefdfSMatthew G. Knepley } 24d9deefdfSMatthew G. Knepley 25d9deefdfSMatthew G. Knepley /*@C 26d9deefdfSMatthew G. Knepley DMPlexInvertCell - This flips tetrahedron and hexahedron orientation since Plex stores them internally with outward normals. Other cells are left untouched. 27d9deefdfSMatthew G. Knepley 28d9deefdfSMatthew G. Knepley Input Parameters: 29d9deefdfSMatthew G. Knepley + numCorners - The number of vertices in a cell 30d9deefdfSMatthew G. Knepley - cone - The incoming cone 31d9deefdfSMatthew G. Knepley 32d9deefdfSMatthew G. Knepley Output Parameter: 33d9deefdfSMatthew G. Knepley . cone - The inverted cone (in-place) 34d9deefdfSMatthew G. Knepley 35d9deefdfSMatthew G. Knepley Level: developer 36d9deefdfSMatthew G. Knepley 37d9deefdfSMatthew G. Knepley .seealso: DMPlexGenerate() 38d9deefdfSMatthew G. Knepley @*/ 39d9deefdfSMatthew G. Knepley PetscErrorCode DMPlexInvertCell(PetscInt dim, PetscInt numCorners, int cone[]) 40d9deefdfSMatthew G. Knepley { 41d9deefdfSMatthew G. Knepley int tmpc; 42d9deefdfSMatthew G. Knepley 43d9deefdfSMatthew G. Knepley PetscFunctionBegin; 44d9deefdfSMatthew G. Knepley if (dim != 3) PetscFunctionReturn(0); 45d9deefdfSMatthew G. Knepley switch (numCorners) { 46d9deefdfSMatthew G. Knepley case 4: 47d9deefdfSMatthew G. Knepley tmpc = cone[0]; 48d9deefdfSMatthew G. Knepley cone[0] = cone[1]; 49d9deefdfSMatthew G. Knepley cone[1] = tmpc; 50d9deefdfSMatthew G. Knepley break; 51d9deefdfSMatthew G. Knepley case 8: 52d9deefdfSMatthew G. Knepley tmpc = cone[1]; 53d9deefdfSMatthew G. Knepley cone[1] = cone[3]; 54d9deefdfSMatthew G. Knepley cone[3] = tmpc; 55d9deefdfSMatthew G. Knepley break; 56d9deefdfSMatthew G. Knepley default: break; 57d9deefdfSMatthew G. Knepley } 58d9deefdfSMatthew G. Knepley PetscFunctionReturn(0); 59d9deefdfSMatthew G. Knepley } 60d9deefdfSMatthew G. Knepley 61d9deefdfSMatthew G. Knepley 6294ef8ddeSSatish Balay /*@C 63d9deefdfSMatthew G. Knepley DMPlexTriangleSetOptions - Set the options used for the Triangle mesh generator 64d9deefdfSMatthew G. Knepley 65d9deefdfSMatthew G. Knepley Not Collective 66d9deefdfSMatthew G. Knepley 67d9deefdfSMatthew G. Knepley Inputs Parameters: 68d9deefdfSMatthew G. Knepley + dm - The DMPlex object 69d9deefdfSMatthew G. Knepley - opts - The command line options 70d9deefdfSMatthew G. Knepley 71d9deefdfSMatthew G. Knepley Level: developer 72d9deefdfSMatthew G. Knepley 73d9deefdfSMatthew G. Knepley .keywords: mesh, points 74d9deefdfSMatthew G. Knepley .seealso: DMPlexTetgenSetOptions(), DMPlexGenerate() 75d9deefdfSMatthew G. Knepley @*/ 76d9deefdfSMatthew G. Knepley PetscErrorCode DMPlexTriangleSetOptions(DM dm, const char *opts) 77d9deefdfSMatthew G. Knepley { 78d9deefdfSMatthew G. Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 79d9deefdfSMatthew G. Knepley PetscErrorCode ierr; 80d9deefdfSMatthew G. Knepley 81d9deefdfSMatthew G. Knepley PetscFunctionBegin; 82d9deefdfSMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 83d9deefdfSMatthew G. Knepley PetscValidPointer(opts, 2); 84606ac3a5SMatthew G. Knepley ierr = PetscFree(mesh->triangleOpts);CHKERRQ(ierr); 85606ac3a5SMatthew G. Knepley ierr = PetscStrallocpy(opts, &mesh->triangleOpts);CHKERRQ(ierr); 86d9deefdfSMatthew G. Knepley PetscFunctionReturn(0); 87d9deefdfSMatthew G. Knepley } 88d9deefdfSMatthew G. Knepley 8994ef8ddeSSatish Balay /*@C 90d9deefdfSMatthew G. Knepley DMPlexTetgenSetOptions - Set the options used for the Tetgen mesh generator 91d9deefdfSMatthew G. Knepley 92d9deefdfSMatthew G. Knepley Not Collective 93d9deefdfSMatthew G. Knepley 94d9deefdfSMatthew G. Knepley Inputs Parameters: 95d9deefdfSMatthew G. Knepley + dm - The DMPlex object 96d9deefdfSMatthew G. Knepley - opts - The command line options 97d9deefdfSMatthew G. Knepley 98d9deefdfSMatthew G. Knepley Level: developer 99d9deefdfSMatthew G. Knepley 100d9deefdfSMatthew G. Knepley .keywords: mesh, points 101d9deefdfSMatthew G. Knepley .seealso: DMPlexTriangleSetOptions(), DMPlexGenerate() 102d9deefdfSMatthew G. Knepley @*/ 103d9deefdfSMatthew G. Knepley PetscErrorCode DMPlexTetgenSetOptions(DM dm, const char *opts) 104d9deefdfSMatthew G. Knepley { 105d9deefdfSMatthew G. Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 106d9deefdfSMatthew G. Knepley PetscErrorCode ierr; 107d9deefdfSMatthew G. Knepley 108d9deefdfSMatthew G. Knepley PetscFunctionBegin; 109d9deefdfSMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 110d9deefdfSMatthew G. Knepley PetscValidPointer(opts, 2); 111606ac3a5SMatthew G. Knepley ierr = PetscFree(mesh->tetgenOpts);CHKERRQ(ierr); 112606ac3a5SMatthew G. Knepley ierr = PetscStrallocpy(opts, &mesh->tetgenOpts);CHKERRQ(ierr); 113d9deefdfSMatthew G. Knepley PetscFunctionReturn(0); 114d9deefdfSMatthew G. Knepley } 115d9deefdfSMatthew G. Knepley 1163a074057SBarry Smith /* 1173a074057SBarry Smith Contains the list of registered DMPlexGenerators routines 1183a074057SBarry Smith */ 1193a074057SBarry Smith PetscFunctionList DMPlexGenerateList = NULL; 120d9deefdfSMatthew G. Knepley 1213a074057SBarry Smith struct _n_PetscFunctionList { 1223a074057SBarry Smith PetscErrorCode (*generate)(DM, PetscBool, DM*); 1233a074057SBarry Smith PetscErrorCode (*refine)(DM,double*, DM*); 1243a074057SBarry Smith char *name; /* string to identify routine */ 1253a074057SBarry Smith PetscInt dim; 1263a074057SBarry Smith PetscFunctionList next; /* next pointer */ 1273a074057SBarry Smith }; 128d9deefdfSMatthew G. Knepley 129d9deefdfSMatthew G. Knepley /*@C 130d9deefdfSMatthew G. Knepley DMPlexGenerate - Generates a mesh. 131d9deefdfSMatthew G. Knepley 132d9deefdfSMatthew G. Knepley Not Collective 133d9deefdfSMatthew G. Knepley 134d9deefdfSMatthew G. Knepley Input Parameters: 135d9deefdfSMatthew G. Knepley + boundary - The DMPlex boundary object 136d9deefdfSMatthew G. Knepley . name - The mesh generation package name 137d9deefdfSMatthew G. Knepley - interpolate - Flag to create intermediate mesh elements 138d9deefdfSMatthew G. Knepley 139d9deefdfSMatthew G. Knepley Output Parameter: 140d9deefdfSMatthew G. Knepley . mesh - The DMPlex object 141d9deefdfSMatthew G. Knepley 142d9deefdfSMatthew G. Knepley Level: intermediate 143d9deefdfSMatthew G. Knepley 144d9deefdfSMatthew G. Knepley .keywords: mesh, elements 145d9deefdfSMatthew G. Knepley .seealso: DMPlexCreate(), DMRefine() 146d9deefdfSMatthew G. Knepley @*/ 147d9deefdfSMatthew G. Knepley PetscErrorCode DMPlexGenerate(DM boundary, const char name[], PetscBool interpolate, DM *mesh) 148d9deefdfSMatthew G. Knepley { 149d9deefdfSMatthew G. Knepley PetscInt dim; 150d9deefdfSMatthew G. Knepley char genname[1024]; 1513a074057SBarry Smith PetscBool flg; 152d9deefdfSMatthew G. Knepley PetscErrorCode ierr; 1533a074057SBarry Smith PetscFunctionList fl; 154d9deefdfSMatthew G. Knepley 155d9deefdfSMatthew G. Knepley PetscFunctionBegin; 156d9deefdfSMatthew G. Knepley PetscValidHeaderSpecific(boundary, DM_CLASSID, 1); 157d9deefdfSMatthew G. Knepley PetscValidLogicalCollectiveBool(boundary, interpolate, 2); 158d9deefdfSMatthew G. Knepley ierr = DMGetDimension(boundary, &dim);CHKERRQ(ierr); 159c5929fdfSBarry Smith ierr = PetscOptionsGetString(((PetscObject) boundary)->options,((PetscObject) boundary)->prefix, "-dm_plex_generator", genname, 1024, &flg);CHKERRQ(ierr); 160d9deefdfSMatthew G. Knepley if (flg) name = genname; 1613a074057SBarry Smith 1623a074057SBarry Smith fl = DMPlexGenerateList; 163d9deefdfSMatthew G. Knepley if (name) { 1643a074057SBarry Smith while (fl) { 1653a074057SBarry Smith ierr = PetscStrcmp(fl->name,name,&flg);CHKERRQ(ierr); 1663a074057SBarry Smith if (flg) { 167*367003a6SStefano Zampini ierr = (*fl->generate)(boundary,interpolate,mesh);CHKERRQ(ierr); 1683a074057SBarry Smith PetscFunctionReturn(0); 169d9deefdfSMatthew G. Knepley } 1703a074057SBarry Smith fl = fl->next; 171d9deefdfSMatthew G. Knepley } 172*367003a6SStefano Zampini SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Grid generator %g not registered",name); 1733a074057SBarry Smith } else { 1743a074057SBarry Smith while (fl) { 1753a074057SBarry Smith if (boundary->dim == fl->dim) { 176*367003a6SStefano Zampini ierr = (*fl->generate)(boundary,interpolate,mesh);CHKERRQ(ierr); 1773a074057SBarry Smith PetscFunctionReturn(0); 1783a074057SBarry Smith } 1793a074057SBarry Smith fl = fl->next; 1803a074057SBarry Smith } 181*367003a6SStefano Zampini SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"No grid generator of dimension %D registered",boundary->dim); 1823a074057SBarry Smith } 1833a074057SBarry Smith PetscFunctionReturn(0); 1843a074057SBarry Smith } 1853a074057SBarry Smith 1863a074057SBarry Smith /*@C 1873a074057SBarry Smith DMPlexGenerateRegister - Adds a grid generator to DMPlex 1883a074057SBarry Smith 1893a074057SBarry Smith Not Collective 1903a074057SBarry Smith 1913a074057SBarry Smith Input Parameters: 192cd921712SStefano Zampini + name_solver - name of a new user-defined grid generator 1933a074057SBarry Smith . fnc - generator function 1943a074057SBarry Smith . rfnc - refinement function 1953a074057SBarry Smith - dim - dimension of boundary of domain 1963a074057SBarry Smith 1973a074057SBarry Smith Notes: 1983a074057SBarry Smith DMPlexGenerateRegister() may be called multiple times to add several user-defined solvers. 1993a074057SBarry Smith 2003a074057SBarry Smith Sample usage: 2013a074057SBarry Smith .vb 202cd921712SStefano Zampini DMPlexGenerateRegister("my_generator",MyGeneratorCreate,MyGeneratorRefiner,dim); 2033a074057SBarry Smith .ve 2043a074057SBarry Smith 2053a074057SBarry Smith Then, your generator can be chosen with the procedural interface via 206cd921712SStefano Zampini $ DMPlexGenerate(dm,"my_generator",...) 2073a074057SBarry Smith or at runtime via the option 208cd921712SStefano Zampini $ -dm_plex_generator my_generator 2093a074057SBarry Smith 2103a074057SBarry Smith Level: advanced 2113a074057SBarry Smith 2123a074057SBarry Smith .keywords: DMPlexGenerate, register 2133a074057SBarry Smith 214cd921712SStefano Zampini .seealso: DMPlexGenerateRegisterAll(), DMPlexGenerate(), DMPlexGenerateRegisterDestroy() 2153a074057SBarry Smith 2163a074057SBarry Smith @*/ 2173a074057SBarry Smith PetscErrorCode DMPlexGenerateRegister(const char sname[],PetscErrorCode (*fnc)(DM, PetscBool,DM*), PetscErrorCode (*rfnc)(DM, double*,DM*),PetscInt dim) 2183a074057SBarry Smith { 2193a074057SBarry Smith PetscErrorCode ierr; 2203a074057SBarry Smith PetscFunctionList entry; 2213a074057SBarry Smith 2223a074057SBarry Smith PetscFunctionBegin; 2233a074057SBarry Smith ierr = PetscNew(&entry);CHKERRQ(ierr); 2243a074057SBarry Smith ierr = PetscStrallocpy(sname,&entry->name);CHKERRQ(ierr); 2253a074057SBarry Smith entry->generate = fnc; 2263a074057SBarry Smith entry->refine = rfnc; 2273a074057SBarry Smith entry->dim = dim; 2283a074057SBarry Smith entry->next = NULL; 2293a074057SBarry Smith if (!DMPlexGenerateList) DMPlexGenerateList = entry; 2303a074057SBarry Smith else { 2313a074057SBarry Smith PetscFunctionList fl = DMPlexGenerateList; 2323a074057SBarry Smith while (fl->next) fl = fl->next; 2333a074057SBarry Smith fl->next = entry; 2343a074057SBarry Smith } 2353a074057SBarry Smith PetscFunctionReturn(0); 2363a074057SBarry Smith } 2373a074057SBarry Smith 2383a074057SBarry Smith extern PetscBool DMPlexGenerateRegisterAllCalled; 2393a074057SBarry Smith 2403a074057SBarry Smith PetscErrorCode DMPlexGenerateRegisterDestroy(void) 2413a074057SBarry Smith { 2423a074057SBarry Smith PetscFunctionList next,fl; 2433a074057SBarry Smith PetscErrorCode ierr; 2443a074057SBarry Smith 2453a074057SBarry Smith PetscFunctionBegin; 2463a074057SBarry Smith next = fl = DMPlexGenerateList; 2473a074057SBarry Smith while (next) { 2483a074057SBarry Smith next = fl ? fl->next : NULL; 2493a074057SBarry Smith if (fl) {ierr = PetscFree(fl->name);CHKERRQ(ierr);} 2503a074057SBarry Smith ierr = PetscFree(fl);CHKERRQ(ierr); 2513a074057SBarry Smith fl = next; 2523a074057SBarry Smith } 2533a074057SBarry Smith DMPlexGenerateList = NULL; 2543a074057SBarry Smith DMPlexGenerateRegisterAllCalled = PETSC_FALSE; 255d9deefdfSMatthew G. Knepley PetscFunctionReturn(0); 256d9deefdfSMatthew G. Knepley } 257