1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdmplex.h> 4012bc364SMatthew G. Knepley #include <petscdmplextransform.h> 50a19bb7dSprj- #include <petscsf.h> 6c4762a1bSJed Brown 7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP}; 8c4762a1bSJed Brown 9c4762a1bSJed Brown typedef struct { 10c4762a1bSJed Brown PetscLogEvent createMeshEvent; 11c4762a1bSJed Brown PetscLogStage stages[4]; 12c4762a1bSJed Brown /* Domain and mesh definition */ 13c4762a1bSJed Brown PetscInt dim; /* The topological mesh dimension */ 14c4762a1bSJed Brown PetscInt overlap; /* The cell overlap to use during partitioning */ 15c4762a1bSJed Brown PetscBool testp4est[2]; 16c4762a1bSJed Brown PetscBool redistribute; 17c4762a1bSJed Brown PetscBool final_ref; /* Run refinement at the end */ 18c4762a1bSJed Brown PetscBool final_diagnostics; /* Run diagnostics on the final mesh */ 19c4762a1bSJed Brown } AppCtx; 20c4762a1bSJed Brown 21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 22c4762a1bSJed Brown { 23c4762a1bSJed Brown PetscErrorCode ierr; 24c4762a1bSJed Brown 25c4762a1bSJed Brown PetscFunctionBegin; 26c4762a1bSJed Brown options->dim = 2; 27c4762a1bSJed Brown options->overlap = 0; 28c4762a1bSJed Brown options->testp4est[0] = PETSC_FALSE; 29c4762a1bSJed Brown options->testp4est[1] = PETSC_FALSE; 30c4762a1bSJed Brown options->redistribute = PETSC_FALSE; 31c4762a1bSJed Brown options->final_ref = PETSC_FALSE; 32c4762a1bSJed Brown options->final_diagnostics = PETSC_TRUE; 33c4762a1bSJed Brown 34c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr); 35*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3)); 36*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0)); 37*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL)); 38*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL)); 39*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL)); 40*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL)); 41*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL)); 421e1ea65dSPierre Jolivet ierr = PetscOptionsEnd();CHKERRQ(ierr); 43c4762a1bSJed Brown 44*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent)); 45*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshLoad", &options->stages[STAGE_LOAD])); 46*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE])); 47*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshRefine", &options->stages[STAGE_REFINE])); 48*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshOverlap", &options->stages[STAGE_OVERLAP])); 49c4762a1bSJed Brown PetscFunctionReturn(0); 50c4762a1bSJed Brown } 51c4762a1bSJed Brown 52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 53c4762a1bSJed Brown { 54c4762a1bSJed Brown PetscInt dim = user->dim; 55c4762a1bSJed Brown PetscBool testp4est_seq = user->testp4est[0]; 56c4762a1bSJed Brown PetscBool testp4est_par = user->testp4est[1]; 57c4762a1bSJed Brown PetscMPIInt rank, size; 58db2bf62eSStefano Zampini PetscBool periodic; 59c4762a1bSJed Brown 60c4762a1bSJed Brown PetscFunctionBegin; 61*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventBegin(user->createMeshEvent,0,0,0,0)); 62*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_rank(comm, &rank)); 63*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_size(comm, &size)); 64*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_LOAD])); 65*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMCreate(comm, dm)); 66*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetType(*dm, DMPLEX)); 67*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(*dm, PETSC_FALSE)); 68*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 69db2bf62eSStefano Zampini 70db2bf62eSStefano Zampini /* For topologically periodic meshes, we first localize coordinates, 71db2bf62eSStefano Zampini and then remove any information related with the 72db2bf62eSStefano Zampini automatic computation of localized vertices. 73db2bf62eSStefano Zampini This way, refinement operations and conversions to p4est 74db2bf62eSStefano Zampini will preserve the shape of the domain in physical space */ 75*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMLocalizeCoordinates(*dm)); 76*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL)); 77*5f80ce2aSJacob Faibussowitsch if (periodic) CHKERRQ(DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL)); 78db2bf62eSStefano Zampini 79*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm,NULL,"-init_dm_view")); 80*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetDimension(*dm, &dim)); 81c4762a1bSJed Brown 82c4762a1bSJed Brown if (testp4est_seq) { 83c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 84c4762a1bSJed Brown DM dmConv = NULL; 85c4762a1bSJed Brown 86*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 87*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 88*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 89*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 90*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 91*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 92*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 93*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX)); 94*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv)); 95*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 96c4762a1bSJed Brown if (dmConv) { 97*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 98c4762a1bSJed Brown *dm = dmConv; 99c4762a1bSJed Brown } 100*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm,NULL,"-initref_dm_view")); 101*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 102*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 103*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 104*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 105*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 106*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 107c4762a1bSJed Brown 108*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv)); 109c4762a1bSJed Brown if (dmConv) { 110*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_")); 111*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 112*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 113c4762a1bSJed Brown *dm = dmConv; 114c4762a1bSJed Brown } 115*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_")); 116*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetUp(*dm)); 117*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 118*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,DMPLEX,&dmConv)); 119c4762a1bSJed Brown if (dmConv) { 120*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_")); 121*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE)); 122*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 123*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 124c4762a1bSJed Brown *dm = dmConv; 125c4762a1bSJed Brown } 126*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_")); 127*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 128*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 129c4762a1bSJed Brown #else 130c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 131c4762a1bSJed Brown #endif 132c4762a1bSJed Brown } 133c4762a1bSJed Brown 134*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 135c4762a1bSJed Brown if (!testp4est_seq) { 136*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_DISTRIBUTE])); 137*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view")); 138*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_")); 139*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 140*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 141*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 142*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-distributed_dm_view")); 143c4762a1bSJed Brown } 144*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_REFINE])); 145*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_")); 146*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 147*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 148*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 149c4762a1bSJed Brown 150c4762a1bSJed Brown if (testp4est_par) { 151c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 152c4762a1bSJed Brown DM dmConv = NULL; 153c4762a1bSJed Brown 154*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view")); 155*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 156*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX)); 157*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv)); 158*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 159c4762a1bSJed Brown if (dmConv) { 160*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 161c4762a1bSJed Brown *dm = dmConv; 162c4762a1bSJed Brown } 163*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view")); 164*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 165*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 166*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 167*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 168*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 169*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 170c4762a1bSJed Brown 171*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv)); 172c4762a1bSJed Brown if (dmConv) { 173*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_")); 174*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 175*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 176c4762a1bSJed Brown *dm = dmConv; 177c4762a1bSJed Brown } 178*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_")); 179*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetUp(*dm)); 180*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 181*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm, DMPLEX, &dmConv)); 182c4762a1bSJed Brown if (dmConv) { 183*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_")); 184*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE)); 185*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 186*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 187c4762a1bSJed Brown *dm = dmConv; 188c4762a1bSJed Brown } 189*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_")); 190*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 191*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 192c4762a1bSJed Brown #else 193c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 194c4762a1bSJed Brown #endif 195c4762a1bSJed Brown } 196c4762a1bSJed Brown 197c4762a1bSJed Brown /* test redistribution of an already distributed mesh */ 198c4762a1bSJed Brown if (user->redistribute) { 199c4762a1bSJed Brown DM distributedMesh; 2000a19bb7dSprj- PetscSF sf; 2010a19bb7dSprj- PetscInt nranks; 202c4762a1bSJed Brown 203*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view")); 204*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistribute(*dm, 0, NULL, &distributedMesh)); 205c4762a1bSJed Brown if (distributedMesh) { 206*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetPointSF(distributedMesh, &sf)); 207*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSFSetUp(sf)); 208*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetNeighbors(distributedMesh, &nranks, NULL)); 209*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm))); 210*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks)); 211*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 212c4762a1bSJed Brown *dm = distributedMesh; 213c4762a1bSJed Brown } 214*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_redist_view")); 215c4762a1bSJed Brown } 216c4762a1bSJed Brown 217c4762a1bSJed Brown if (user->overlap) { 218c4762a1bSJed Brown DM overlapMesh = NULL; 219c4762a1bSJed Brown 220c4762a1bSJed Brown /* Add the overlap to refined mesh */ 221*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_OVERLAP])); 222*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view")); 223*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh)); 224c4762a1bSJed Brown if (overlapMesh) { 225c4762a1bSJed Brown PetscInt overlap; 226*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetOverlap(overlapMesh, &overlap)); 227*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap)); 228*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 229c4762a1bSJed Brown *dm = overlapMesh; 230c4762a1bSJed Brown } 231*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view")); 232*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 233c4762a1bSJed Brown } 234c4762a1bSJed Brown if (user->final_ref) { 235c4762a1bSJed Brown DM refinedMesh = NULL; 236c4762a1bSJed Brown 237*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 238*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, comm, &refinedMesh)); 239c4762a1bSJed Brown if (refinedMesh) { 240*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 241c4762a1bSJed Brown *dm = refinedMesh; 242c4762a1bSJed Brown } 243c4762a1bSJed Brown } 244c4762a1bSJed Brown 245*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetName((PetscObject) *dm, "Generated Mesh")); 246*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 247c4762a1bSJed Brown if (user->final_diagnostics) { 248c4762a1bSJed Brown DMPlexInterpolatedFlag interpolated; 249c4762a1bSJed Brown PetscInt dim, depth; 250c4762a1bSJed Brown 251*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetDimension(*dm, &dim)); 252*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetDepth(*dm, &depth)); 253*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexIsInterpolatedCollective(*dm, &interpolated)); 254c4762a1bSJed Brown 255*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 256c4762a1bSJed Brown if (interpolated == DMPLEX_INTERPOLATED_FULL) { 257*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 258c4762a1bSJed Brown } 259*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 260*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 261c4762a1bSJed Brown } 262*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventEnd(user->createMeshEvent,0,0,0,0)); 263c4762a1bSJed Brown PetscFunctionReturn(0); 264c4762a1bSJed Brown } 265c4762a1bSJed Brown 266c4762a1bSJed Brown int main(int argc, char **argv) 267c4762a1bSJed Brown { 26830602db0SMatthew G. Knepley DM dm; 26930602db0SMatthew G. Knepley AppCtx user; 270c4762a1bSJed Brown PetscErrorCode ierr; 271c4762a1bSJed Brown 272c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; 273*5f80ce2aSJacob Faibussowitsch CHKERRQ(ProcessOptions(PETSC_COMM_WORLD, &user)); 274*5f80ce2aSJacob Faibussowitsch CHKERRQ(CreateMesh(PETSC_COMM_WORLD, &user, &dm)); 275*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(&dm)); 276c4762a1bSJed Brown ierr = PetscFinalize(); 277c4762a1bSJed Brown return ierr; 278c4762a1bSJed Brown } 279c4762a1bSJed Brown 280c4762a1bSJed Brown /*TEST 281c4762a1bSJed Brown 282c4762a1bSJed Brown # CTetGen 0-1 283c4762a1bSJed Brown test: 284c4762a1bSJed Brown suffix: 0 285c4762a1bSJed Brown requires: ctetgen 28630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys 287c4762a1bSJed Brown test: 288c4762a1bSJed Brown suffix: 1 289c4762a1bSJed Brown requires: ctetgen 29030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys 291c4762a1bSJed Brown 292c4762a1bSJed Brown # 2D LaTex and ASCII output 2-9 293c4762a1bSJed Brown test: 294c4762a1bSJed Brown suffix: 2 295c4762a1bSJed Brown requires: triangle 29630602db0SMatthew G. Knepley args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex 297c4762a1bSJed Brown test: 298c4762a1bSJed Brown suffix: 3 299c4762a1bSJed Brown requires: triangle 30030602db0SMatthew G. Knepley args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 301c4762a1bSJed Brown test: 302c4762a1bSJed Brown suffix: 4 303c4762a1bSJed Brown requires: triangle 304c4762a1bSJed Brown nsize: 2 30530602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail 306c4762a1bSJed Brown test: 307c4762a1bSJed Brown suffix: 5 308c4762a1bSJed Brown requires: triangle 309c4762a1bSJed Brown nsize: 2 31030602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 311c4762a1bSJed Brown test: 312c4762a1bSJed Brown suffix: 6 31330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail 314c4762a1bSJed Brown test: 315c4762a1bSJed Brown suffix: 7 31630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 317c4762a1bSJed Brown test: 318c4762a1bSJed Brown suffix: 8 319c4762a1bSJed Brown nsize: 2 32030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 321c4762a1bSJed Brown 322c4762a1bSJed Brown # 1D ASCII output 32330602db0SMatthew G. Knepley testset: 32430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all 325c4762a1bSJed Brown test: 326c4762a1bSJed Brown suffix: 1d_0 32730602db0SMatthew G. Knepley args: 328c4762a1bSJed Brown test: 329c4762a1bSJed Brown suffix: 1d_1 33030602db0SMatthew G. Knepley args: -ref_dm_refine 2 331c4762a1bSJed Brown test: 332c4762a1bSJed Brown suffix: 1d_2 33330602db0SMatthew G. Knepley args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic 334c4762a1bSJed Brown 335c4762a1bSJed Brown # Parallel refinement tests with overlap 336c4762a1bSJed Brown test: 337c4762a1bSJed Brown suffix: refine_overlap_1d 338c4762a1bSJed Brown nsize: 2 33930602db0SMatthew G. Knepley args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info 340c4762a1bSJed Brown test: 341c4762a1bSJed Brown suffix: refine_overlap_2d 342c4762a1bSJed Brown requires: triangle 343c4762a1bSJed Brown nsize: {{2 8}separate output} 34430602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info 345c4762a1bSJed Brown 346d410b0cfSMatthew G. Knepley # Parallel extrusion tests 347d410b0cfSMatthew G. Knepley test: 348d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded 349d410b0cfSMatthew G. Knepley nsize : 4 350d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \ 351d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 352d410b0cfSMatthew G. Knepley 353d410b0cfSMatthew G. Knepley test: 354d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded_symmetric 355d410b0cfSMatthew G. Knepley nsize : 4 356d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \ 357d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 358d410b0cfSMatthew G. Knepley 359c4762a1bSJed Brown # Parallel simple partitioner tests 360c4762a1bSJed Brown test: 361c4762a1bSJed Brown suffix: part_simple_0 362c4762a1bSJed Brown requires: triangle 363c4762a1bSJed Brown nsize: 2 36430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 365c4762a1bSJed Brown test: 366c4762a1bSJed Brown suffix: part_simple_1 367c4762a1bSJed Brown requires: triangle 368c4762a1bSJed Brown nsize: 8 36930602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 370c4762a1bSJed Brown 371c4762a1bSJed Brown # Parallel partitioner tests 372c4762a1bSJed Brown test: 373c4762a1bSJed Brown suffix: part_parmetis_0 374c4762a1bSJed Brown requires: parmetis 375c4762a1bSJed Brown nsize: 2 3765a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 377c4762a1bSJed Brown test: 378c4762a1bSJed Brown suffix: part_ptscotch_0 379c4762a1bSJed Brown requires: ptscotch 380c4762a1bSJed Brown nsize: 2 3815a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 382c4762a1bSJed Brown test: 383c4762a1bSJed Brown suffix: part_ptscotch_1 384c4762a1bSJed Brown requires: ptscotch 385c4762a1bSJed Brown nsize: 8 38630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1 387c4762a1bSJed Brown 388c4762a1bSJed Brown # CGNS reader tests 10-11 (need to find smaller test meshes) 389c4762a1bSJed Brown test: 390c4762a1bSJed Brown suffix: cgns_0 391c4762a1bSJed Brown requires: cgns 39230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view 393c4762a1bSJed Brown 394c4762a1bSJed Brown # Gmsh mesh reader tests 39530602db0SMatthew G. Knepley testset: 39630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view 39730602db0SMatthew G. Knepley 398c4762a1bSJed Brown test: 399c4762a1bSJed Brown suffix: gmsh_0 400c4762a1bSJed Brown requires: !single 40130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 402c4762a1bSJed Brown test: 403c4762a1bSJed Brown suffix: gmsh_1 404c4762a1bSJed Brown requires: !single 40530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh 406c4762a1bSJed Brown test: 407c4762a1bSJed Brown suffix: gmsh_2 408c4762a1bSJed Brown requires: !single 40930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh 410c4762a1bSJed Brown test: 411c4762a1bSJed Brown suffix: gmsh_3 412c4762a1bSJed Brown nsize: 3 413c4762a1bSJed Brown requires: !single 41430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple 415c4762a1bSJed Brown test: 416c4762a1bSJed Brown suffix: gmsh_4 417c4762a1bSJed Brown nsize: 3 418c4762a1bSJed Brown requires: !single 41930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple 420c4762a1bSJed Brown test: 421c4762a1bSJed Brown suffix: gmsh_5 422c4762a1bSJed Brown requires: !single 42330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh 424c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 425c4762a1bSJed Brown test: 426c4762a1bSJed Brown suffix: gmsh_6 427c4762a1bSJed Brown requires: !single 42830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0 429c4762a1bSJed Brown test: 430c4762a1bSJed Brown suffix: gmsh_7 43130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 432c4762a1bSJed Brown test: 433c4762a1bSJed Brown suffix: gmsh_8 43430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all 435c4762a1bSJed Brown testset: 43630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 437c4762a1bSJed Brown test: 438c4762a1bSJed Brown suffix: gmsh_9 439c4762a1bSJed Brown test: 440c4762a1bSJed Brown suffix: gmsh_9_periodic_0 441c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 442c4762a1bSJed Brown testset: 44330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all 444c4762a1bSJed Brown test: 445c4762a1bSJed Brown suffix: gmsh_10 446c4762a1bSJed Brown test: 447c4762a1bSJed Brown suffix: gmsh_10_periodic_0 448c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 449c4762a1bSJed Brown testset: 45030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1 451c4762a1bSJed Brown test: 452c4762a1bSJed Brown suffix: gmsh_11 453c4762a1bSJed Brown test: 454c4762a1bSJed Brown suffix: gmsh_11_periodic_0 455c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 456c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 457c4762a1bSJed Brown test: 458c4762a1bSJed Brown suffix: gmsh_12 459c4762a1bSJed Brown nsize: 4 460c4762a1bSJed Brown requires: !single mpiio 46130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 462c4762a1bSJed Brown test: 463c4762a1bSJed Brown suffix: gmsh_13_hybs2t 464c4762a1bSJed Brown nsize: 4 465012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 466c4762a1bSJed Brown test: 467c4762a1bSJed Brown suffix: gmsh_14_ext 468c4762a1bSJed Brown requires: !single 469d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all 470c4762a1bSJed Brown test: 471c4762a1bSJed Brown suffix: gmsh_14_ext_s2t 472c4762a1bSJed Brown requires: !single 473d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 474c4762a1bSJed Brown test: 475c4762a1bSJed Brown suffix: gmsh_15_hyb3d 47630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all 477c4762a1bSJed Brown test: 478c4762a1bSJed Brown suffix: gmsh_15_hyb3d_vtk 47930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all 480c4762a1bSJed Brown test: 481c4762a1bSJed Brown suffix: gmsh_15_hyb3d_s2t 482012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 483c4762a1bSJed Brown test: 484c4762a1bSJed Brown suffix: gmsh_16_spheresurface 485c4762a1bSJed Brown nsize : 4 48630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 487c4762a1bSJed Brown test: 488c4762a1bSJed Brown suffix: gmsh_16_spheresurface_s2t 489c4762a1bSJed Brown nsize : 4 490012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 491c4762a1bSJed Brown test: 492c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded 493c4762a1bSJed Brown nsize : 4 494d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 495c4762a1bSJed Brown test: 496c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded_s2t 497c4762a1bSJed Brown nsize : 4 498d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 499c4762a1bSJed Brown test: 500c4762a1bSJed Brown suffix: gmsh_17_hyb3d_interp_ascii 50130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all 502c4762a1bSJed Brown test: 503c4762a1bSJed Brown suffix: exodus_17_hyb3d_interp_ascii 504c4762a1bSJed Brown requires: exodusii 50530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all 506c4762a1bSJed Brown 507c4762a1bSJed Brown # Legacy Gmsh v22/v40 ascii/binary reader tests 508c4762a1bSJed Brown testset: 509c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_legacy.out 51030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 511c4762a1bSJed Brown test: 512c4762a1bSJed Brown suffix: gmsh_3d_ascii_v22 51330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2 514c4762a1bSJed Brown test: 515c4762a1bSJed Brown suffix: gmsh_3d_ascii_v40 51630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4 517c4762a1bSJed Brown test: 518c4762a1bSJed Brown suffix: gmsh_3d_binary_v22 51930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2 520c4762a1bSJed Brown test: 521c4762a1bSJed Brown suffix: gmsh_3d_binary_v40 522c4762a1bSJed Brown requires: long64 52330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4 524c4762a1bSJed Brown 525c4762a1bSJed Brown # Gmsh v41 ascii/binary reader tests 526c4762a1bSJed Brown testset: # 32bit mesh, sequential 52781a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 528c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32.out 529c4762a1bSJed Brown test: 530c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32 53130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 532c4762a1bSJed Brown test: 533c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32 53430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 535c4762a1bSJed Brown test: 536c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_mpiio 537dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 53830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 5398cd392daSMatthew G. Knepley test: 5408cd392daSMatthew G. Knepley suffix: gmsh_quad_8node 5418cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-qua-8node.msh \ 54281a1af93SMatthew G. Knepley -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices 5438cd392daSMatthew G. Knepley test: 5448cd392daSMatthew G. Knepley suffix: gmsh_hex_20node 5458cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-hex-20node.msh \ 54681a1af93SMatthew G. Knepley -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices 547c4762a1bSJed Brown testset: # 32bit mesh, parallel 54881a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 549c4762a1bSJed Brown nsize: 2 550c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32_np2.out 551c4762a1bSJed Brown test: 552c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32_np2 55330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 554c4762a1bSJed Brown test: 555c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2 55630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 557c4762a1bSJed Brown test: 558c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2_mpiio 559dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 56030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 561c4762a1bSJed Brown testset: # 64bit mesh, sequential 56281a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 563c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64.out 564c4762a1bSJed Brown test: 565c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64 56630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 567c4762a1bSJed Brown test: 568c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64 56930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 570c4762a1bSJed Brown test: 571c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_mpiio 572dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 57330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 574c4762a1bSJed Brown testset: # 64bit mesh, parallel 57581a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 576c4762a1bSJed Brown nsize: 2 577c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64_np2.out 578c4762a1bSJed Brown test: 579c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64_np2 58030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 581c4762a1bSJed Brown test: 582c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2 58330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 584c4762a1bSJed Brown test: 585c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2_mpiio 586dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 58730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 588c4762a1bSJed Brown 589c4762a1bSJed Brown # Fluent mesh reader tests 590c4762a1bSJed Brown # TODO: Geometry checks fail 591c4762a1bSJed Brown test: 592c4762a1bSJed Brown suffix: fluent_0 593c4762a1bSJed Brown requires: !complex 59430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0 595c4762a1bSJed Brown test: 596c4762a1bSJed Brown suffix: fluent_1 597c4762a1bSJed Brown nsize: 3 598c4762a1bSJed Brown requires: !complex 59930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 600c4762a1bSJed Brown test: 601c4762a1bSJed Brown suffix: fluent_2 602c4762a1bSJed Brown requires: !complex 60330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0 604c4762a1bSJed Brown test: 605c4762a1bSJed Brown suffix: fluent_3 606c4762a1bSJed Brown requires: !complex 607c4762a1bSJed Brown TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382 60830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0 609c4762a1bSJed Brown 610c4762a1bSJed Brown # Med mesh reader tests, including parallel file reads 611c4762a1bSJed Brown test: 612c4762a1bSJed Brown suffix: med_0 613c4762a1bSJed Brown requires: med 61430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view 615c4762a1bSJed Brown test: 616c4762a1bSJed Brown suffix: med_1 617c4762a1bSJed Brown requires: med 618c4762a1bSJed Brown nsize: 3 61930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 620c4762a1bSJed Brown test: 621c4762a1bSJed Brown suffix: med_2 622c4762a1bSJed Brown requires: med 62330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view 624c4762a1bSJed Brown test: 625c4762a1bSJed Brown suffix: med_3 626c4762a1bSJed Brown requires: med 627c4762a1bSJed Brown TODO: MED 628c4762a1bSJed Brown nsize: 3 62930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 630c4762a1bSJed Brown 631c4762a1bSJed Brown # Test shape quality 632c4762a1bSJed Brown test: 633c4762a1bSJed Brown suffix: test_shape 634c4762a1bSJed Brown requires: ctetgen 63530602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape 636c4762a1bSJed Brown 637c4762a1bSJed Brown # Test simplex to tensor conversion 638c4762a1bSJed Brown test: 639c4762a1bSJed Brown suffix: s2t2 640c4762a1bSJed Brown requires: triangle 641012bc364SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 642c4762a1bSJed Brown 643c4762a1bSJed Brown test: 644c4762a1bSJed Brown suffix: s2t3 645c4762a1bSJed Brown requires: ctetgen 646012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 647c4762a1bSJed Brown 64830602db0SMatthew G. Knepley # Test cylinder 64930602db0SMatthew G. Knepley testset: 65030602db0SMatthew G. Knepley args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view 651c4762a1bSJed Brown test: 652c4762a1bSJed Brown suffix: cylinder 65330602db0SMatthew G. Knepley args: -ref_dm_refine 1 654c4762a1bSJed Brown test: 655c4762a1bSJed Brown suffix: cylinder_per 65661a622f3SMatthew G. Knepley args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0 657c4762a1bSJed Brown test: 658c4762a1bSJed Brown suffix: cylinder_wedge 65961a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 660c4762a1bSJed Brown test: 661c4762a1bSJed Brown suffix: cylinder_wedge_int 662c4762a1bSJed Brown output_file: output/ex1_cylinder_wedge.out 66361a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 664c4762a1bSJed Brown 665c4762a1bSJed Brown test: 666c4762a1bSJed Brown suffix: box_2d 66730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 668c4762a1bSJed Brown 669c4762a1bSJed Brown test: 670c4762a1bSJed Brown suffix: box_2d_per 67130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 672c4762a1bSJed Brown 673c4762a1bSJed Brown test: 674c4762a1bSJed Brown suffix: box_2d_per_unint 67530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail 676c4762a1bSJed Brown 677c4762a1bSJed Brown test: 678c4762a1bSJed Brown suffix: box_3d 67930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view 680c4762a1bSJed Brown 681c4762a1bSJed Brown test: 682c4762a1bSJed Brown requires: triangle 683c4762a1bSJed Brown suffix: box_wedge 68461a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all 685c4762a1bSJed Brown 686c4762a1bSJed Brown testset: 687c4762a1bSJed Brown requires: triangle 688012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 689c4762a1bSJed Brown test: 690c4762a1bSJed Brown suffix: box_wedge_s2t 691c4762a1bSJed Brown test: 692c4762a1bSJed Brown nsize: 3 69330602db0SMatthew G. Knepley args: -dist_dm_distribute -petscpartitioner_type simple 694c4762a1bSJed Brown suffix: box_wedge_s2t_parallel 695c4762a1bSJed Brown 696c4762a1bSJed Brown # Test GLVis output 69730602db0SMatthew G. Knepley testset: 69830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 699c4762a1bSJed Brown test: 700c4762a1bSJed Brown suffix: glvis_2d_tet 70130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 702c4762a1bSJed Brown test: 703c4762a1bSJed Brown suffix: glvis_2d_tet_per 70430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 705c4762a1bSJed Brown test: 706c4762a1bSJed Brown suffix: glvis_3d_tet 70730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 70830602db0SMatthew G. Knepley testset: 70930602db0SMatthew G. Knepley args: -dm_coord_space 0 71030602db0SMatthew G. Knepley test: 71130602db0SMatthew G. Knepley suffix: glvis_2d_tet_per_mfem 71230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 71330602db0SMatthew G. Knepley test: 71430602db0SMatthew G. Knepley suffix: glvis_2d_quad 71530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis: 71630602db0SMatthew G. Knepley test: 71730602db0SMatthew G. Knepley suffix: glvis_2d_quad_per 71830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 71930602db0SMatthew G. Knepley test: 72030602db0SMatthew G. Knepley suffix: glvis_2d_quad_per_mfem 72130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 722c4762a1bSJed Brown test: 723c4762a1bSJed Brown suffix: glvis_3d_tet_per 72430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 725c4762a1bSJed Brown test: 726c4762a1bSJed Brown suffix: glvis_3d_tet_per_mfem 727c4762a1bSJed Brown TODO: broken 72830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 729c4762a1bSJed Brown test: 730c4762a1bSJed Brown suffix: glvis_3d_hex 73130602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis: 732c4762a1bSJed Brown test: 733c4762a1bSJed Brown suffix: glvis_3d_hex_per 73430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 735c4762a1bSJed Brown test: 736c4762a1bSJed Brown suffix: glvis_3d_hex_per_mfem 73730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 73830602db0SMatthew G. Knepley test: 73930602db0SMatthew G. Knepley suffix: glvis_2d_hyb 74030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74130602db0SMatthew G. Knepley test: 74230602db0SMatthew G. Knepley suffix: glvis_3d_hyb 74330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74430602db0SMatthew G. Knepley test: 74530602db0SMatthew G. Knepley suffix: glvis_3d_hyb_s2t 746012bc364SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 747c4762a1bSJed Brown 748c4762a1bSJed Brown # Test P4EST 749c4762a1bSJed Brown testset: 750c4762a1bSJed Brown requires: p4est 75130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1 752c4762a1bSJed Brown test: 753c4762a1bSJed Brown suffix: p4est_periodic 75430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 755c4762a1bSJed Brown test: 756c4762a1bSJed Brown suffix: p4est_periodic_3d 75730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 758c4762a1bSJed Brown test: 759c4762a1bSJed Brown suffix: p4est_gmsh_periodic 76030602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 761c4762a1bSJed Brown test: 762c4762a1bSJed Brown suffix: p4est_gmsh_surface 76330602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 764c4762a1bSJed Brown test: 765c4762a1bSJed Brown suffix: p4est_gmsh_surface_parallel 766c4762a1bSJed Brown nsize: 2 76730602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance 768c4762a1bSJed Brown test: 769c4762a1bSJed Brown suffix: p4est_hyb_2d 77030602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 771c4762a1bSJed Brown test: 772c4762a1bSJed Brown suffix: p4est_hyb_3d 77330602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 774c4762a1bSJed Brown test: 775c4762a1bSJed Brown requires: ctetgen 776c4762a1bSJed Brown suffix: p4est_s2t_bugfaces_3d 77730602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1 778c4762a1bSJed Brown test: 779c4762a1bSJed Brown suffix: p4est_bug_overlapsf 780c4762a1bSJed Brown nsize: 3 78130602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple 782c4762a1bSJed Brown test: 783c4762a1bSJed Brown suffix: p4est_redistribute 784c4762a1bSJed Brown nsize: 3 7855a107427SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_view ::load_balance 786c4762a1bSJed Brown test: 787c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d 78830602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 789c4762a1bSJed Brown test: 790c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d_hash 79130602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 792c4762a1bSJed Brown test: 793c4762a1bSJed Brown requires: long_runtime 794c4762a1bSJed Brown suffix: p4est_gmsh_periodic_3d 79530602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 796c4762a1bSJed Brown 797c4762a1bSJed Brown testset: 798c4762a1bSJed Brown requires: p4est 799c4762a1bSJed Brown nsize: 6 80030602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute 801c4762a1bSJed Brown test: 80254fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 803c4762a1bSJed Brown suffix: p4est_par_periodic 80430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 805c4762a1bSJed Brown test: 80654fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 807c4762a1bSJed Brown suffix: p4est_par_periodic_3d 80830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 809c4762a1bSJed Brown test: 81054fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 811c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic 81230602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 813c4762a1bSJed Brown test: 814c4762a1bSJed Brown suffix: p4est_par_gmsh_surface 81530602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 816c4762a1bSJed Brown test: 817c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d 81830602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 819c4762a1bSJed Brown test: 82054fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 821c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d_hash 82230602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 823c4762a1bSJed Brown test: 824c4762a1bSJed Brown requires: long_runtime 825c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic_3d 82630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 827c4762a1bSJed Brown 828c4762a1bSJed Brown testset: 829c4762a1bSJed Brown requires: p4est 830c4762a1bSJed Brown nsize: 6 83130602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple 832c4762a1bSJed Brown test: 833c4762a1bSJed Brown suffix: p4est_par_ovl_periodic 83430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 835c4762a1bSJed Brown #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled) 836c4762a1bSJed Brown test: 837c4762a1bSJed Brown suffix: p4est_par_ovl_periodic_3d 83830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0 839c4762a1bSJed Brown test: 840c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic 84130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 842c4762a1bSJed Brown test: 843c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_surface 84430602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 845c4762a1bSJed Brown test: 846c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d 84730602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 848c4762a1bSJed Brown test: 849c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d_hash 85030602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 851c4762a1bSJed Brown test: 852c4762a1bSJed Brown requires: long_runtime 853c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic_3d 85430602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 855c4762a1bSJed Brown test: 856c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_2d 85730602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 858c4762a1bSJed Brown test: 859c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_3d 86030602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 861c4762a1bSJed Brown 862c4762a1bSJed Brown test: 863c4762a1bSJed Brown TODO: broken 864c4762a1bSJed Brown requires: p4est 865c4762a1bSJed Brown nsize: 2 866c4762a1bSJed Brown suffix: p4est_bug_labels_noovl 86730602db0SMatthew G. Knepley args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error 868c4762a1bSJed Brown 869c4762a1bSJed Brown test: 870c4762a1bSJed Brown requires: p4est 871c4762a1bSJed Brown nsize: 2 872c4762a1bSJed Brown suffix: p4est_bug_distribute_overlap 87330602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance 874c4762a1bSJed Brown args: -dm_post_overlap_view 875c4762a1bSJed Brown 876c4762a1bSJed Brown test: 877595782ffSMatthew G. Knepley suffix: ref_alfeld2d_0 878595782ffSMatthew G. Knepley requires: triangle 879012bc364SMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 880595782ffSMatthew G. Knepley test: 881595782ffSMatthew G. Knepley suffix: ref_alfeld3d_0 882595782ffSMatthew G. Knepley requires: ctetgen 883012bc364SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 884595782ffSMatthew G. Knepley 88509c713e7SStefano Zampini # Boundary layer refiners 88609c713e7SStefano Zampini test: 88709c713e7SStefano Zampini suffix: ref_bl_1 888d410b0cfSMatthew G. Knepley args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3 88909c713e7SStefano Zampini test: 89009c713e7SStefano Zampini suffix: ref_bl_2_tri 89109c713e7SStefano Zampini requires: triangle 892d410b0cfSMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89309c713e7SStefano Zampini test: 89409c713e7SStefano Zampini suffix: ref_bl_3_quad 895d410b0cfSMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89609c713e7SStefano Zampini test: 89709c713e7SStefano Zampini suffix: ref_bl_spheresurface_extruded 89809c713e7SStefano Zampini nsize : 4 899d410b0cfSMatthew G. Knepley args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2 90009c713e7SStefano Zampini test: 90109c713e7SStefano Zampini suffix: ref_bl_3d_hyb 90209c713e7SStefano Zampini nsize : 4 903012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1 9040e278f6aSMatthew G. Knepley 90530602db0SMatthew G. Knepley testset: 90630602db0SMatthew G. Knepley args: -dm_plex_shape sphere -dm_plex_check_all -dm_view 9070e278f6aSMatthew G. Knepley test: 9080e278f6aSMatthew G. Knepley suffix: sphere_0 90930602db0SMatthew G. Knepley args: 9100e278f6aSMatthew G. Knepley test: 9110e278f6aSMatthew G. Knepley suffix: sphere_1 91230602db0SMatthew G. Knepley args: -ref_dm_refine 2 9130e278f6aSMatthew G. Knepley test: 91468317524SMatthew G. Knepley suffix: sphere_2 91530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 91668317524SMatthew G. Knepley test: 91768317524SMatthew G. Knepley suffix: sphere_3 91830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 91968317524SMatthew G. Knepley 92068317524SMatthew G. Knepley test: 9210e278f6aSMatthew G. Knepley suffix: ball_0 9220e278f6aSMatthew G. Knepley requires: ctetgen 92330602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view 9240e278f6aSMatthew G. Knepley 9250e278f6aSMatthew G. Knepley test: 9260e278f6aSMatthew G. Knepley suffix: ball_1 9270e278f6aSMatthew G. Knepley requires: ctetgen 92830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view 9290e278f6aSMatthew G. Knepley 9303fb88a6bSJed Brown test: 9313fb88a6bSJed Brown suffix: schwarz_p_extrude 9323fb88a6bSJed Brown args: -dm_plex_shape schwarz_p -dm_plex_tps_extent 1,1,1 -dm_plex_tps_layers 1 -dm_plex_tps_thickness .2 -dm_view 933c4762a1bSJed Brown TEST*/ 934