xref: /petsc/src/dm/impls/plex/tests/ex1.c (revision b122ec5aa1bd4469eb4e0673542fb7de3f411254)
1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n";
2c4762a1bSJed Brown 
3c4762a1bSJed Brown #include <petscdmplex.h>
4012bc364SMatthew G. Knepley #include <petscdmplextransform.h>
50a19bb7dSprj- #include <petscsf.h>
6c4762a1bSJed Brown 
7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP};
8c4762a1bSJed Brown 
9c4762a1bSJed Brown typedef struct {
10c4762a1bSJed Brown   PetscLogEvent createMeshEvent;
11c4762a1bSJed Brown   PetscLogStage stages[4];
12c4762a1bSJed Brown   /* Domain and mesh definition */
13c4762a1bSJed Brown   PetscInt      dim;                             /* The topological mesh dimension */
14c4762a1bSJed Brown   PetscInt      overlap;                         /* The cell overlap to use during partitioning */
15c4762a1bSJed Brown   PetscBool     testp4est[2];
16c4762a1bSJed Brown   PetscBool     redistribute;
17c4762a1bSJed Brown   PetscBool     final_ref;                       /* Run refinement at the end */
18c4762a1bSJed Brown   PetscBool     final_diagnostics;               /* Run diagnostics on the final mesh */
19c4762a1bSJed Brown } AppCtx;
20c4762a1bSJed Brown 
21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)
22c4762a1bSJed Brown {
23c4762a1bSJed Brown   PetscErrorCode ierr;
24c4762a1bSJed Brown 
25c4762a1bSJed Brown   PetscFunctionBegin;
26c4762a1bSJed Brown   options->dim               = 2;
27c4762a1bSJed Brown   options->overlap           = 0;
28c4762a1bSJed Brown   options->testp4est[0]      = PETSC_FALSE;
29c4762a1bSJed Brown   options->testp4est[1]      = PETSC_FALSE;
30c4762a1bSJed Brown   options->redistribute      = PETSC_FALSE;
31c4762a1bSJed Brown   options->final_ref         = PETSC_FALSE;
32c4762a1bSJed Brown   options->final_diagnostics = PETSC_TRUE;
33c4762a1bSJed Brown 
34c4762a1bSJed Brown   ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr);
355f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3));
365f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0));
375f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL));
385f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL));
395f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL));
405f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL));
415f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL));
421e1ea65dSPierre Jolivet   ierr = PetscOptionsEnd();CHKERRQ(ierr);
43c4762a1bSJed Brown 
445f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent));
455f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStageRegister("MeshLoad",       &options->stages[STAGE_LOAD]));
465f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE]));
475f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStageRegister("MeshRefine",     &options->stages[STAGE_REFINE]));
485f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStageRegister("MeshOverlap",    &options->stages[STAGE_OVERLAP]));
49c4762a1bSJed Brown   PetscFunctionReturn(0);
50c4762a1bSJed Brown }
51c4762a1bSJed Brown 
52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)
53c4762a1bSJed Brown {
54c4762a1bSJed Brown   PetscInt       dim           = user->dim;
55c4762a1bSJed Brown   PetscBool      testp4est_seq = user->testp4est[0];
56c4762a1bSJed Brown   PetscBool      testp4est_par = user->testp4est[1];
57c4762a1bSJed Brown   PetscMPIInt    rank, size;
58db2bf62eSStefano Zampini   PetscBool      periodic;
59c4762a1bSJed Brown 
60c4762a1bSJed Brown   PetscFunctionBegin;
615f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogEventBegin(user->createMeshEvent,0,0,0,0));
625f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_rank(comm, &rank));
635f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm, &size));
645f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStagePush(user->stages[STAGE_LOAD]));
655f80ce2aSJacob Faibussowitsch   CHKERRQ(DMCreate(comm, dm));
665f80ce2aSJacob Faibussowitsch   CHKERRQ(DMSetType(*dm, DMPLEX));
675f80ce2aSJacob Faibussowitsch   CHKERRQ(DMPlexDistributeSetDefault(*dm, PETSC_FALSE));
685f80ce2aSJacob Faibussowitsch   CHKERRQ(DMSetFromOptions(*dm));
69db2bf62eSStefano Zampini 
70db2bf62eSStefano Zampini   /* For topologically periodic meshes, we first localize coordinates,
71db2bf62eSStefano Zampini      and then remove any information related with the
72db2bf62eSStefano Zampini      automatic computation of localized vertices.
73db2bf62eSStefano Zampini      This way, refinement operations and conversions to p4est
74db2bf62eSStefano Zampini      will preserve the shape of the domain in physical space */
755f80ce2aSJacob Faibussowitsch   CHKERRQ(DMLocalizeCoordinates(*dm));
765f80ce2aSJacob Faibussowitsch   CHKERRQ(DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL));
775f80ce2aSJacob Faibussowitsch   if (periodic) CHKERRQ(DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL));
78db2bf62eSStefano Zampini 
795f80ce2aSJacob Faibussowitsch   CHKERRQ(DMViewFromOptions(*dm,NULL,"-init_dm_view"));
805f80ce2aSJacob Faibussowitsch   CHKERRQ(DMGetDimension(*dm, &dim));
81c4762a1bSJed Brown 
82c4762a1bSJed Brown   if (testp4est_seq) {
83c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
84c4762a1bSJed Brown     DM dmConv = NULL;
85c4762a1bSJed Brown 
865f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSymmetry(*dm));
875f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSkeleton(*dm, 0));
885f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckFaces(*dm, 0));
895f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckGeometry(*dm));
905f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckPointSF(*dm));
915f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckInterfaceCones(*dm));
925f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE));
935f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX));
945f80ce2aSJacob Faibussowitsch     CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv));
955f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
96c4762a1bSJed Brown     if (dmConv) {
975f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
98c4762a1bSJed Brown       *dm  = dmConv;
99c4762a1bSJed Brown     }
1005f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm,NULL,"-initref_dm_view"));
1015f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSymmetry(*dm));
1025f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSkeleton(*dm, 0));
1035f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckFaces(*dm, 0));
1045f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckGeometry(*dm));
1055f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckPointSF(*dm));
1065f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckInterfaceCones(*dm));
107c4762a1bSJed Brown 
1085f80ce2aSJacob Faibussowitsch     CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv));
109c4762a1bSJed Brown     if (dmConv) {
1105f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_"));
1115f80ce2aSJacob Faibussowitsch       CHKERRQ(DMSetFromOptions(dmConv));
1125f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
113c4762a1bSJed Brown       *dm  = dmConv;
114c4762a1bSJed Brown     }
1155f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_"));
1165f80ce2aSJacob Faibussowitsch     CHKERRQ(DMSetUp(*dm));
1175f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view"));
1185f80ce2aSJacob Faibussowitsch     CHKERRQ(DMConvert(*dm,DMPLEX,&dmConv));
119c4762a1bSJed Brown     if (dmConv) {
1205f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_"));
1215f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE));
1225f80ce2aSJacob Faibussowitsch       CHKERRQ(DMSetFromOptions(dmConv));
1235f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
124c4762a1bSJed Brown       *dm  = dmConv;
125c4762a1bSJed Brown     }
1265f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_"));
1275f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view"));
1285f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
129c4762a1bSJed Brown #else
130c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
131c4762a1bSJed Brown #endif
132c4762a1bSJed Brown   }
133c4762a1bSJed Brown 
1345f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStagePop());
135c4762a1bSJed Brown   if (!testp4est_seq) {
1365f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogStagePush(user->stages[STAGE_DISTRIBUTE]));
1375f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view"));
1385f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_"));
1395f80ce2aSJacob Faibussowitsch     CHKERRQ(DMSetFromOptions(*dm));
1405f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
1415f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogStagePop());
1425f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-distributed_dm_view"));
143c4762a1bSJed Brown   }
1445f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStagePush(user->stages[STAGE_REFINE]));
1455f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_"));
1465f80ce2aSJacob Faibussowitsch   CHKERRQ(DMSetFromOptions(*dm));
1475f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
1485f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogStagePop());
149c4762a1bSJed Brown 
150c4762a1bSJed Brown   if (testp4est_par) {
151c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
152c4762a1bSJed Brown     DM dmConv = NULL;
153c4762a1bSJed Brown 
1545f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view"));
1555f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE));
1565f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX));
1575f80ce2aSJacob Faibussowitsch     CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv));
1585f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
159c4762a1bSJed Brown     if (dmConv) {
1605f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
161c4762a1bSJed Brown       *dm  = dmConv;
162c4762a1bSJed Brown     }
1635f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view"));
1645f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSymmetry(*dm));
1655f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSkeleton(*dm, 0));
1665f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckFaces(*dm, 0));
1675f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckGeometry(*dm));
1685f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckPointSF(*dm));
1695f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckInterfaceCones(*dm));
170c4762a1bSJed Brown 
1715f80ce2aSJacob Faibussowitsch     CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv));
172c4762a1bSJed Brown     if (dmConv) {
1735f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_"));
1745f80ce2aSJacob Faibussowitsch       CHKERRQ(DMSetFromOptions(dmConv));
1755f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
176c4762a1bSJed Brown       *dm  = dmConv;
177c4762a1bSJed Brown     }
1785f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_"));
1795f80ce2aSJacob Faibussowitsch     CHKERRQ(DMSetUp(*dm));
1805f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view"));
1815f80ce2aSJacob Faibussowitsch     CHKERRQ(DMConvert(*dm, DMPLEX, &dmConv));
182c4762a1bSJed Brown     if (dmConv) {
1835f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_"));
1845f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE));
1855f80ce2aSJacob Faibussowitsch       CHKERRQ(DMSetFromOptions(dmConv));
1865f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
187c4762a1bSJed Brown       *dm  = dmConv;
188c4762a1bSJed Brown     }
1895f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_"));
1905f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view"));
1915f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL));
192c4762a1bSJed Brown #else
193c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
194c4762a1bSJed Brown #endif
195c4762a1bSJed Brown   }
196c4762a1bSJed Brown 
197c4762a1bSJed Brown   /* test redistribution of an already distributed mesh */
198c4762a1bSJed Brown   if (user->redistribute) {
199c4762a1bSJed Brown     DM       distributedMesh;
2000a19bb7dSprj-     PetscSF  sf;
2010a19bb7dSprj-     PetscInt nranks;
202c4762a1bSJed Brown 
2035f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view"));
2045f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexDistribute(*dm, 0, NULL, &distributedMesh));
205c4762a1bSJed Brown     if (distributedMesh) {
2065f80ce2aSJacob Faibussowitsch       CHKERRQ(DMGetPointSF(distributedMesh, &sf));
2075f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscSFSetUp(sf));
2085f80ce2aSJacob Faibussowitsch       CHKERRQ(DMGetNeighbors(distributedMesh, &nranks, NULL));
2095f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm)));
2105f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks));
2115f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
212c4762a1bSJed Brown       *dm  = distributedMesh;
213c4762a1bSJed Brown     }
2145f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_redist_view"));
215c4762a1bSJed Brown   }
216c4762a1bSJed Brown 
217c4762a1bSJed Brown   if (user->overlap) {
218c4762a1bSJed Brown     DM overlapMesh = NULL;
219c4762a1bSJed Brown 
220c4762a1bSJed Brown     /* Add the overlap to refined mesh */
2215f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogStagePush(user->stages[STAGE_OVERLAP]));
2225f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view"));
2235f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh));
224c4762a1bSJed Brown     if (overlapMesh) {
225c4762a1bSJed Brown       PetscInt overlap;
2265f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexGetOverlap(overlapMesh, &overlap));
2275f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap));
2285f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
229c4762a1bSJed Brown       *dm = overlapMesh;
230c4762a1bSJed Brown     }
2315f80ce2aSJacob Faibussowitsch     CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view"));
2325f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogStagePop());
233c4762a1bSJed Brown   }
234c4762a1bSJed Brown   if (user->final_ref) {
235c4762a1bSJed Brown     DM refinedMesh = NULL;
236c4762a1bSJed Brown 
2375f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE));
2385f80ce2aSJacob Faibussowitsch     CHKERRQ(DMRefine(*dm, comm, &refinedMesh));
239c4762a1bSJed Brown     if (refinedMesh) {
2405f80ce2aSJacob Faibussowitsch       CHKERRQ(DMDestroy(dm));
241c4762a1bSJed Brown       *dm  = refinedMesh;
242c4762a1bSJed Brown     }
243c4762a1bSJed Brown   }
244c4762a1bSJed Brown 
2455f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectSetName((PetscObject) *dm, "Generated Mesh"));
2465f80ce2aSJacob Faibussowitsch   CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view"));
247c4762a1bSJed Brown   if (user->final_diagnostics) {
248c4762a1bSJed Brown     DMPlexInterpolatedFlag interpolated;
249c4762a1bSJed Brown     PetscInt  dim, depth;
250c4762a1bSJed Brown 
2515f80ce2aSJacob Faibussowitsch     CHKERRQ(DMGetDimension(*dm, &dim));
2525f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexGetDepth(*dm, &depth));
2535f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexIsInterpolatedCollective(*dm, &interpolated));
254c4762a1bSJed Brown 
2555f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSymmetry(*dm));
256c4762a1bSJed Brown     if (interpolated == DMPLEX_INTERPOLATED_FULL) {
2575f80ce2aSJacob Faibussowitsch       CHKERRQ(DMPlexCheckFaces(*dm, 0));
258c4762a1bSJed Brown     }
2595f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckSkeleton(*dm, 0));
2605f80ce2aSJacob Faibussowitsch     CHKERRQ(DMPlexCheckGeometry(*dm));
261c4762a1bSJed Brown   }
2625f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogEventEnd(user->createMeshEvent,0,0,0,0));
263c4762a1bSJed Brown   PetscFunctionReturn(0);
264c4762a1bSJed Brown }
265c4762a1bSJed Brown 
266c4762a1bSJed Brown int main(int argc, char **argv)
267c4762a1bSJed Brown {
26830602db0SMatthew G. Knepley   DM             dm;
26930602db0SMatthew G. Knepley   AppCtx         user;
270c4762a1bSJed Brown 
271*b122ec5aSJacob Faibussowitsch   CHKERRQ(PetscInitialize(&argc, &argv, NULL, help));
2725f80ce2aSJacob Faibussowitsch   CHKERRQ(ProcessOptions(PETSC_COMM_WORLD, &user));
2735f80ce2aSJacob Faibussowitsch   CHKERRQ(CreateMesh(PETSC_COMM_WORLD, &user, &dm));
2745f80ce2aSJacob Faibussowitsch   CHKERRQ(DMDestroy(&dm));
275*b122ec5aSJacob Faibussowitsch   CHKERRQ(PetscFinalize());
276*b122ec5aSJacob Faibussowitsch   return 0;
277c4762a1bSJed Brown }
278c4762a1bSJed Brown 
279c4762a1bSJed Brown /*TEST
280c4762a1bSJed Brown 
281c4762a1bSJed Brown   # CTetGen 0-1
282c4762a1bSJed Brown   test:
283c4762a1bSJed Brown     suffix: 0
284c4762a1bSJed Brown     requires: ctetgen
28530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys
286c4762a1bSJed Brown   test:
287c4762a1bSJed Brown     suffix: 1
288c4762a1bSJed Brown     requires: ctetgen
28930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys
290c4762a1bSJed Brown 
291c4762a1bSJed Brown   # 2D LaTex and ASCII output 2-9
292c4762a1bSJed Brown   test:
293c4762a1bSJed Brown     suffix: 2
294c4762a1bSJed Brown     requires: triangle
29530602db0SMatthew G. Knepley     args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex
296c4762a1bSJed Brown   test:
297c4762a1bSJed Brown     suffix: 3
298c4762a1bSJed Brown     requires: triangle
29930602db0SMatthew G. Knepley     args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
300c4762a1bSJed Brown   test:
301c4762a1bSJed Brown     suffix: 4
302c4762a1bSJed Brown     requires: triangle
303c4762a1bSJed Brown     nsize: 2
30430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail
305c4762a1bSJed Brown   test:
306c4762a1bSJed Brown     suffix: 5
307c4762a1bSJed Brown     requires: triangle
308c4762a1bSJed Brown     nsize: 2
30930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
310c4762a1bSJed Brown   test:
311c4762a1bSJed Brown     suffix: 6
31230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail
313c4762a1bSJed Brown   test:
314c4762a1bSJed Brown     suffix: 7
31530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
316c4762a1bSJed Brown   test:
317c4762a1bSJed Brown     suffix: 8
318c4762a1bSJed Brown     nsize: 2
31930602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
320c4762a1bSJed Brown 
321c4762a1bSJed Brown   # 1D ASCII output
32230602db0SMatthew G. Knepley   testset:
32330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all
324c4762a1bSJed Brown     test:
325c4762a1bSJed Brown       suffix: 1d_0
32630602db0SMatthew G. Knepley       args:
327c4762a1bSJed Brown     test:
328c4762a1bSJed Brown       suffix: 1d_1
32930602db0SMatthew G. Knepley       args: -ref_dm_refine 2
330c4762a1bSJed Brown     test:
331c4762a1bSJed Brown       suffix: 1d_2
33230602db0SMatthew G. Knepley       args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic
333c4762a1bSJed Brown 
334c4762a1bSJed Brown   # Parallel refinement tests with overlap
335c4762a1bSJed Brown   test:
336c4762a1bSJed Brown     suffix: refine_overlap_1d
337c4762a1bSJed Brown     nsize: 2
33830602db0SMatthew G. Knepley     args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info
339c4762a1bSJed Brown   test:
340c4762a1bSJed Brown     suffix: refine_overlap_2d
341c4762a1bSJed Brown     requires: triangle
342c4762a1bSJed Brown     nsize: {{2 8}separate output}
34330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info
344c4762a1bSJed Brown 
345d410b0cfSMatthew G. Knepley   # Parallel extrusion tests
346d410b0cfSMatthew G. Knepley   test:
347d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded
348d410b0cfSMatthew G. Knepley     nsize : 4
349d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \
350d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
351d410b0cfSMatthew G. Knepley 
352d410b0cfSMatthew G. Knepley   test:
353d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded_symmetric
354d410b0cfSMatthew G. Knepley     nsize : 4
355d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \
356d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
357d410b0cfSMatthew G. Knepley 
358c4762a1bSJed Brown   # Parallel simple partitioner tests
359c4762a1bSJed Brown   test:
360c4762a1bSJed Brown     suffix: part_simple_0
361c4762a1bSJed Brown     requires: triangle
362c4762a1bSJed Brown     nsize: 2
36330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
364c4762a1bSJed Brown   test:
365c4762a1bSJed Brown     suffix: part_simple_1
366c4762a1bSJed Brown     requires: triangle
367c4762a1bSJed Brown     nsize: 8
36830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
369c4762a1bSJed Brown 
370c4762a1bSJed Brown   # Parallel partitioner tests
371c4762a1bSJed Brown   test:
372c4762a1bSJed Brown     suffix: part_parmetis_0
373c4762a1bSJed Brown     requires: parmetis
374c4762a1bSJed Brown     nsize: 2
3755a107427SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
376c4762a1bSJed Brown   test:
377c4762a1bSJed Brown     suffix: part_ptscotch_0
378c4762a1bSJed Brown     requires: ptscotch
379c4762a1bSJed Brown     nsize: 2
3805a107427SMatthew G. Knepley     args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
381c4762a1bSJed Brown   test:
382c4762a1bSJed Brown     suffix: part_ptscotch_1
383c4762a1bSJed Brown     requires: ptscotch
384c4762a1bSJed Brown     nsize: 8
38530602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1
386c4762a1bSJed Brown 
387c4762a1bSJed Brown   # CGNS reader tests 10-11 (need to find smaller test meshes)
388c4762a1bSJed Brown   test:
389c4762a1bSJed Brown     suffix: cgns_0
390c4762a1bSJed Brown     requires: cgns
39130602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view
392c4762a1bSJed Brown 
393c4762a1bSJed Brown   # Gmsh mesh reader tests
39430602db0SMatthew G. Knepley   testset:
39530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view
39630602db0SMatthew G. Knepley 
397c4762a1bSJed Brown     test:
398c4762a1bSJed Brown       suffix: gmsh_0
399c4762a1bSJed Brown       requires: !single
40030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
401c4762a1bSJed Brown     test:
402c4762a1bSJed Brown       suffix: gmsh_1
403c4762a1bSJed Brown       requires: !single
40430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh
405c4762a1bSJed Brown     test:
406c4762a1bSJed Brown       suffix: gmsh_2
407c4762a1bSJed Brown       requires: !single
40830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh
409c4762a1bSJed Brown     test:
410c4762a1bSJed Brown       suffix: gmsh_3
411c4762a1bSJed Brown       nsize: 3
412c4762a1bSJed Brown       requires: !single
41330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple
414c4762a1bSJed Brown     test:
415c4762a1bSJed Brown       suffix: gmsh_4
416c4762a1bSJed Brown       nsize: 3
417c4762a1bSJed Brown       requires: !single
41830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple
419c4762a1bSJed Brown     test:
420c4762a1bSJed Brown       suffix: gmsh_5
421c4762a1bSJed Brown       requires: !single
42230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh
423c4762a1bSJed Brown     # TODO: it seems the mesh is not a valid gmsh (inverted cell)
424c4762a1bSJed Brown     test:
425c4762a1bSJed Brown       suffix: gmsh_6
426c4762a1bSJed Brown       requires: !single
42730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0
428c4762a1bSJed Brown     test:
429c4762a1bSJed Brown       suffix: gmsh_7
43030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
431c4762a1bSJed Brown     test:
432c4762a1bSJed Brown       suffix: gmsh_8
43330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all
434c4762a1bSJed Brown   testset:
43530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
436c4762a1bSJed Brown     test:
437c4762a1bSJed Brown       suffix: gmsh_9
438c4762a1bSJed Brown     test:
439c4762a1bSJed Brown       suffix: gmsh_9_periodic_0
440c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
441c4762a1bSJed Brown   testset:
44230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all
443c4762a1bSJed Brown     test:
444c4762a1bSJed Brown       suffix: gmsh_10
445c4762a1bSJed Brown     test:
446c4762a1bSJed Brown       suffix: gmsh_10_periodic_0
447c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
448c4762a1bSJed Brown   testset:
44930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1
450c4762a1bSJed Brown     test:
451c4762a1bSJed Brown       suffix: gmsh_11
452c4762a1bSJed Brown     test:
453c4762a1bSJed Brown       suffix: gmsh_11_periodic_0
454c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
455c4762a1bSJed Brown   # TODO: it seems the mesh is not a valid gmsh (inverted cell)
456c4762a1bSJed Brown   test:
457c4762a1bSJed Brown     suffix: gmsh_12
458c4762a1bSJed Brown     nsize: 4
459c4762a1bSJed Brown     requires: !single mpiio
46030602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
461c4762a1bSJed Brown   test:
462c4762a1bSJed Brown     suffix: gmsh_13_hybs2t
463c4762a1bSJed Brown     nsize: 4
464012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
465c4762a1bSJed Brown   test:
466c4762a1bSJed Brown     suffix: gmsh_14_ext
467c4762a1bSJed Brown     requires: !single
468d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all
469c4762a1bSJed Brown   test:
470c4762a1bSJed Brown     suffix: gmsh_14_ext_s2t
471c4762a1bSJed Brown     requires: !single
472d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
473c4762a1bSJed Brown   test:
474c4762a1bSJed Brown     suffix: gmsh_15_hyb3d
47530602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all
476c4762a1bSJed Brown   test:
477c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_vtk
47830602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all
479c4762a1bSJed Brown   test:
480c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_s2t
481012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
482c4762a1bSJed Brown   test:
483c4762a1bSJed Brown     suffix: gmsh_16_spheresurface
484c4762a1bSJed Brown     nsize : 4
48530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
486c4762a1bSJed Brown   test:
487c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_s2t
488c4762a1bSJed Brown     nsize : 4
489012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
490c4762a1bSJed Brown   test:
491c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded
492c4762a1bSJed Brown     nsize : 4
493d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
494c4762a1bSJed Brown   test:
495c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded_s2t
496c4762a1bSJed Brown     nsize : 4
497d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
498c4762a1bSJed Brown   test:
499c4762a1bSJed Brown     suffix: gmsh_17_hyb3d_interp_ascii
50030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all
501c4762a1bSJed Brown   test:
502c4762a1bSJed Brown     suffix: exodus_17_hyb3d_interp_ascii
503c4762a1bSJed Brown     requires: exodusii
50430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all
505c4762a1bSJed Brown 
506c4762a1bSJed Brown   # Legacy Gmsh v22/v40 ascii/binary reader tests
507c4762a1bSJed Brown   testset:
508c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_legacy.out
50930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
510c4762a1bSJed Brown     test:
511c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v22
51230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2
513c4762a1bSJed Brown     test:
514c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v40
51530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4
516c4762a1bSJed Brown     test:
517c4762a1bSJed Brown       suffix: gmsh_3d_binary_v22
51830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2
519c4762a1bSJed Brown     test:
520c4762a1bSJed Brown       suffix: gmsh_3d_binary_v40
521c4762a1bSJed Brown       requires: long64
52230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4
523c4762a1bSJed Brown 
524c4762a1bSJed Brown   # Gmsh v41 ascii/binary reader tests
525c4762a1bSJed Brown   testset: # 32bit mesh, sequential
52681a1af93SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices
527c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32.out
528c4762a1bSJed Brown     test:
529c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32
53030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
531c4762a1bSJed Brown     test:
532c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32
53330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
534c4762a1bSJed Brown     test:
535c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_mpiio
536dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
53730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
5388cd392daSMatthew G. Knepley   test:
5398cd392daSMatthew G. Knepley     suffix: gmsh_quad_8node
5408cd392daSMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-qua-8node.msh \
54181a1af93SMatthew G. Knepley           -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices
5428cd392daSMatthew G. Knepley   test:
5438cd392daSMatthew G. Knepley     suffix: gmsh_hex_20node
5448cd392daSMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-hex-20node.msh \
54581a1af93SMatthew G. Knepley           -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices
546c4762a1bSJed Brown   testset:  # 32bit mesh, parallel
54781a1af93SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices
548c4762a1bSJed Brown     nsize: 2
549c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32_np2.out
550c4762a1bSJed Brown     test:
551c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32_np2
55230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
553c4762a1bSJed Brown     test:
554c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2
55530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
556c4762a1bSJed Brown     test:
557c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2_mpiio
558dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
55930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
560c4762a1bSJed Brown   testset: # 64bit mesh, sequential
56181a1af93SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices
562c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64.out
563c4762a1bSJed Brown     test:
564c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64
56530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
566c4762a1bSJed Brown     test:
567c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64
56830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
569c4762a1bSJed Brown     test:
570c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_mpiio
571dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
57230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
573c4762a1bSJed Brown   testset:  # 64bit mesh, parallel
57481a1af93SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices
575c4762a1bSJed Brown     nsize: 2
576c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64_np2.out
577c4762a1bSJed Brown     test:
578c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64_np2
57930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
580c4762a1bSJed Brown     test:
581c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2
58230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
583c4762a1bSJed Brown     test:
584c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2_mpiio
585dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
58630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
587c4762a1bSJed Brown 
588c4762a1bSJed Brown   # Fluent mesh reader tests
589c4762a1bSJed Brown   # TODO: Geometry checks fail
590c4762a1bSJed Brown   test:
591c4762a1bSJed Brown     suffix: fluent_0
592c4762a1bSJed Brown     requires: !complex
59330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0
594c4762a1bSJed Brown   test:
595c4762a1bSJed Brown     suffix: fluent_1
596c4762a1bSJed Brown     nsize: 3
597c4762a1bSJed Brown     requires: !complex
59830602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
599c4762a1bSJed Brown   test:
600c4762a1bSJed Brown     suffix: fluent_2
601c4762a1bSJed Brown     requires: !complex
60230602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0
603c4762a1bSJed Brown   test:
604c4762a1bSJed Brown     suffix: fluent_3
605c4762a1bSJed Brown     requires: !complex
606c4762a1bSJed Brown     TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382
60730602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0
608c4762a1bSJed Brown 
609c4762a1bSJed Brown   # Med mesh reader tests, including parallel file reads
610c4762a1bSJed Brown   test:
611c4762a1bSJed Brown     suffix: med_0
612c4762a1bSJed Brown     requires: med
61330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view
614c4762a1bSJed Brown   test:
615c4762a1bSJed Brown     suffix: med_1
616c4762a1bSJed Brown     requires: med
617c4762a1bSJed Brown     nsize: 3
61830602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
619c4762a1bSJed Brown   test:
620c4762a1bSJed Brown     suffix: med_2
621c4762a1bSJed Brown     requires: med
62230602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view
623c4762a1bSJed Brown   test:
624c4762a1bSJed Brown     suffix: med_3
625c4762a1bSJed Brown     requires: med
626c4762a1bSJed Brown     TODO: MED
627c4762a1bSJed Brown     nsize: 3
62830602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
629c4762a1bSJed Brown 
630c4762a1bSJed Brown   # Test shape quality
631c4762a1bSJed Brown   test:
632c4762a1bSJed Brown     suffix: test_shape
633c4762a1bSJed Brown     requires: ctetgen
63430602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape
635c4762a1bSJed Brown 
636c4762a1bSJed Brown   # Test simplex to tensor conversion
637c4762a1bSJed Brown   test:
638c4762a1bSJed Brown     suffix: s2t2
639c4762a1bSJed Brown     requires: triangle
640012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
641c4762a1bSJed Brown 
642c4762a1bSJed Brown   test:
643c4762a1bSJed Brown     suffix: s2t3
644c4762a1bSJed Brown     requires: ctetgen
645012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
646c4762a1bSJed Brown 
64730602db0SMatthew G. Knepley   # Test cylinder
64830602db0SMatthew G. Knepley   testset:
64930602db0SMatthew G. Knepley     args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view
650c4762a1bSJed Brown     test:
651c4762a1bSJed Brown       suffix: cylinder
65230602db0SMatthew G. Knepley       args: -ref_dm_refine 1
653c4762a1bSJed Brown     test:
654c4762a1bSJed Brown       suffix: cylinder_per
65561a622f3SMatthew G. Knepley       args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0
656c4762a1bSJed Brown     test:
657c4762a1bSJed Brown       suffix: cylinder_wedge
65861a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
659c4762a1bSJed Brown     test:
660c4762a1bSJed Brown       suffix: cylinder_wedge_int
661c4762a1bSJed Brown       output_file: output/ex1_cylinder_wedge.out
66261a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
663c4762a1bSJed Brown 
664c4762a1bSJed Brown   test:
665c4762a1bSJed Brown     suffix: box_2d
66630602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
667c4762a1bSJed Brown 
668c4762a1bSJed Brown   test:
669c4762a1bSJed Brown     suffix: box_2d_per
67030602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
671c4762a1bSJed Brown 
672c4762a1bSJed Brown   test:
673c4762a1bSJed Brown     suffix: box_2d_per_unint
67430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail
675c4762a1bSJed Brown 
676c4762a1bSJed Brown   test:
677c4762a1bSJed Brown     suffix: box_3d
67830602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view
679c4762a1bSJed Brown 
680c4762a1bSJed Brown   test:
681c4762a1bSJed Brown     requires: triangle
682c4762a1bSJed Brown     suffix: box_wedge
68361a622f3SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all
684c4762a1bSJed Brown 
685c4762a1bSJed Brown   testset:
686c4762a1bSJed Brown     requires: triangle
687012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
688c4762a1bSJed Brown     test:
689c4762a1bSJed Brown       suffix: box_wedge_s2t
690c4762a1bSJed Brown     test:
691c4762a1bSJed Brown       nsize: 3
69230602db0SMatthew G. Knepley       args: -dist_dm_distribute -petscpartitioner_type simple
693c4762a1bSJed Brown       suffix: box_wedge_s2t_parallel
694c4762a1bSJed Brown 
695c4762a1bSJed Brown   # Test GLVis output
69630602db0SMatthew G. Knepley   testset:
69730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0
698c4762a1bSJed Brown     test:
699c4762a1bSJed Brown       suffix: glvis_2d_tet
70030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
701c4762a1bSJed Brown     test:
702c4762a1bSJed Brown       suffix: glvis_2d_tet_per
70330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
704c4762a1bSJed Brown     test:
705c4762a1bSJed Brown       suffix: glvis_3d_tet
70630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
70730602db0SMatthew G. Knepley   testset:
70830602db0SMatthew G. Knepley     args: -dm_coord_space 0
70930602db0SMatthew G. Knepley     test:
71030602db0SMatthew G. Knepley       suffix: glvis_2d_tet_per_mfem
71130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
71230602db0SMatthew G. Knepley     test:
71330602db0SMatthew G. Knepley       suffix: glvis_2d_quad
71430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis:
71530602db0SMatthew G. Knepley     test:
71630602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per
71730602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
71830602db0SMatthew G. Knepley     test:
71930602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per_mfem
72030602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
721c4762a1bSJed Brown     test:
722c4762a1bSJed Brown       suffix: glvis_3d_tet_per
72330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
724c4762a1bSJed Brown     test:
725c4762a1bSJed Brown       suffix: glvis_3d_tet_per_mfem
726c4762a1bSJed Brown       TODO: broken
72730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
728c4762a1bSJed Brown     test:
729c4762a1bSJed Brown       suffix: glvis_3d_hex
73030602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis:
731c4762a1bSJed Brown     test:
732c4762a1bSJed Brown       suffix: glvis_3d_hex_per
73330602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
734c4762a1bSJed Brown     test:
735c4762a1bSJed Brown       suffix: glvis_3d_hex_per_mfem
73630602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
73730602db0SMatthew G. Knepley     test:
73830602db0SMatthew G. Knepley       suffix: glvis_2d_hyb
73930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
74030602db0SMatthew G. Knepley     test:
74130602db0SMatthew G. Knepley       suffix: glvis_3d_hyb
74230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
74330602db0SMatthew G. Knepley     test:
74430602db0SMatthew G. Knepley       suffix: glvis_3d_hyb_s2t
745012bc364SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
746c4762a1bSJed Brown 
747c4762a1bSJed Brown   # Test P4EST
748c4762a1bSJed Brown   testset:
749c4762a1bSJed Brown     requires: p4est
75030602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1
751c4762a1bSJed Brown     test:
752c4762a1bSJed Brown       suffix: p4est_periodic
75330602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
754c4762a1bSJed Brown     test:
755c4762a1bSJed Brown       suffix: p4est_periodic_3d
75630602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
757c4762a1bSJed Brown     test:
758c4762a1bSJed Brown       suffix: p4est_gmsh_periodic
75930602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
760c4762a1bSJed Brown     test:
761c4762a1bSJed Brown       suffix: p4est_gmsh_surface
76230602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
763c4762a1bSJed Brown     test:
764c4762a1bSJed Brown       suffix: p4est_gmsh_surface_parallel
765c4762a1bSJed Brown       nsize: 2
76630602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance
767c4762a1bSJed Brown     test:
768c4762a1bSJed Brown       suffix: p4est_hyb_2d
76930602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
770c4762a1bSJed Brown     test:
771c4762a1bSJed Brown       suffix: p4est_hyb_3d
77230602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
773c4762a1bSJed Brown     test:
774c4762a1bSJed Brown       requires: ctetgen
775c4762a1bSJed Brown       suffix: p4est_s2t_bugfaces_3d
77630602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1
777c4762a1bSJed Brown     test:
778c4762a1bSJed Brown       suffix: p4est_bug_overlapsf
779c4762a1bSJed Brown       nsize: 3
78030602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple
781c4762a1bSJed Brown     test:
782c4762a1bSJed Brown       suffix: p4est_redistribute
783c4762a1bSJed Brown       nsize: 3
7845a107427SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_view ::load_balance
785c4762a1bSJed Brown     test:
786c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d
78730602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
788c4762a1bSJed Brown     test:
789c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d_hash
79030602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
791c4762a1bSJed Brown     test:
792c4762a1bSJed Brown       requires: long_runtime
793c4762a1bSJed Brown       suffix: p4est_gmsh_periodic_3d
79430602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
795c4762a1bSJed Brown 
796c4762a1bSJed Brown   testset:
797c4762a1bSJed Brown     requires: p4est
798c4762a1bSJed Brown     nsize: 6
79930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute
800c4762a1bSJed Brown     test:
80154fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
802c4762a1bSJed Brown       suffix: p4est_par_periodic
80330602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
804c4762a1bSJed Brown     test:
80554fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
806c4762a1bSJed Brown       suffix: p4est_par_periodic_3d
80730602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
808c4762a1bSJed Brown     test:
80954fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
810c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic
81130602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
812c4762a1bSJed Brown     test:
813c4762a1bSJed Brown       suffix: p4est_par_gmsh_surface
81430602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
815c4762a1bSJed Brown     test:
816c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d
81730602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
818c4762a1bSJed Brown     test:
81954fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
820c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d_hash
82130602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
822c4762a1bSJed Brown     test:
823c4762a1bSJed Brown       requires: long_runtime
824c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic_3d
82530602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
826c4762a1bSJed Brown 
827c4762a1bSJed Brown   testset:
828c4762a1bSJed Brown     requires: p4est
829c4762a1bSJed Brown     nsize: 6
83030602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple
831c4762a1bSJed Brown     test:
832c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic
83330602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
834c4762a1bSJed Brown     #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled)
835c4762a1bSJed Brown     test:
836c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic_3d
83730602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0
838c4762a1bSJed Brown     test:
839c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic
84030602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
841c4762a1bSJed Brown     test:
842c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_surface
84330602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
844c4762a1bSJed Brown     test:
845c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d
84630602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
847c4762a1bSJed Brown     test:
848c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d_hash
84930602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
850c4762a1bSJed Brown     test:
851c4762a1bSJed Brown       requires: long_runtime
852c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic_3d
85330602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
854c4762a1bSJed Brown     test:
855c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_2d
85630602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
857c4762a1bSJed Brown     test:
858c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_3d
85930602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
860c4762a1bSJed Brown 
861c4762a1bSJed Brown   test:
862c4762a1bSJed Brown     TODO: broken
863c4762a1bSJed Brown     requires: p4est
864c4762a1bSJed Brown     nsize: 2
865c4762a1bSJed Brown     suffix: p4est_bug_labels_noovl
86630602db0SMatthew G. Knepley     args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error
867c4762a1bSJed Brown 
868c4762a1bSJed Brown   test:
869c4762a1bSJed Brown     requires: p4est
870c4762a1bSJed Brown     nsize: 2
871c4762a1bSJed Brown     suffix: p4est_bug_distribute_overlap
87230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance
873c4762a1bSJed Brown     args: -dm_post_overlap_view
874c4762a1bSJed Brown 
875c4762a1bSJed Brown   test:
876595782ffSMatthew G. Knepley     suffix: ref_alfeld2d_0
877595782ffSMatthew G. Knepley     requires: triangle
878012bc364SMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
879595782ffSMatthew G. Knepley   test:
880595782ffSMatthew G. Knepley     suffix: ref_alfeld3d_0
881595782ffSMatthew G. Knepley     requires: ctetgen
882012bc364SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
883595782ffSMatthew G. Knepley 
88409c713e7SStefano Zampini   # Boundary layer refiners
88509c713e7SStefano Zampini   test:
88609c713e7SStefano Zampini     suffix: ref_bl_1
887d410b0cfSMatthew G. Knepley     args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3
88809c713e7SStefano Zampini   test:
88909c713e7SStefano Zampini     suffix: ref_bl_2_tri
89009c713e7SStefano Zampini     requires: triangle
891d410b0cfSMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
89209c713e7SStefano Zampini   test:
89309c713e7SStefano Zampini     suffix: ref_bl_3_quad
894d410b0cfSMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
89509c713e7SStefano Zampini   test:
89609c713e7SStefano Zampini     suffix: ref_bl_spheresurface_extruded
89709c713e7SStefano Zampini     nsize : 4
898d410b0cfSMatthew G. Knepley     args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2
89909c713e7SStefano Zampini   test:
90009c713e7SStefano Zampini     suffix: ref_bl_3d_hyb
90109c713e7SStefano Zampini     nsize : 4
902012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1
9030e278f6aSMatthew G. Knepley 
90430602db0SMatthew G. Knepley   testset:
90530602db0SMatthew G. Knepley     args: -dm_plex_shape sphere -dm_plex_check_all -dm_view
9060e278f6aSMatthew G. Knepley     test:
9070e278f6aSMatthew G. Knepley       suffix: sphere_0
90830602db0SMatthew G. Knepley       args:
9090e278f6aSMatthew G. Knepley     test:
9100e278f6aSMatthew G. Knepley       suffix: sphere_1
91130602db0SMatthew G. Knepley       args: -ref_dm_refine 2
9120e278f6aSMatthew G. Knepley     test:
91368317524SMatthew G. Knepley       suffix: sphere_2
91430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0
91568317524SMatthew G. Knepley     test:
91668317524SMatthew G. Knepley       suffix: sphere_3
91730602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -ref_dm_refine 2
91868317524SMatthew G. Knepley 
91968317524SMatthew G. Knepley   test:
9200e278f6aSMatthew G. Knepley     suffix: ball_0
9210e278f6aSMatthew G. Knepley     requires: ctetgen
92230602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view
9230e278f6aSMatthew G. Knepley 
9240e278f6aSMatthew G. Knepley   test:
9250e278f6aSMatthew G. Knepley     suffix: ball_1
9260e278f6aSMatthew G. Knepley     requires: ctetgen
92730602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view
9280e278f6aSMatthew G. Knepley 
9293fb88a6bSJed Brown   test:
9303fb88a6bSJed Brown     suffix: schwarz_p_extrude
9313fb88a6bSJed Brown     args: -dm_plex_shape schwarz_p -dm_plex_tps_extent 1,1,1 -dm_plex_tps_layers 1 -dm_plex_tps_thickness .2 -dm_view
932c4762a1bSJed Brown TEST*/
933