1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdmplex.h> 4012bc364SMatthew G. Knepley #include <petscdmplextransform.h> 50a19bb7dSprj- #include <petscsf.h> 6c4762a1bSJed Brown 7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP}; 8c4762a1bSJed Brown 9c4762a1bSJed Brown typedef struct { 10c4762a1bSJed Brown PetscLogEvent createMeshEvent; 11c4762a1bSJed Brown PetscLogStage stages[4]; 12c4762a1bSJed Brown /* Domain and mesh definition */ 13c4762a1bSJed Brown PetscInt dim; /* The topological mesh dimension */ 14c4762a1bSJed Brown PetscInt overlap; /* The cell overlap to use during partitioning */ 15c4762a1bSJed Brown PetscBool testp4est[2]; 16c4762a1bSJed Brown PetscBool redistribute; 17c4762a1bSJed Brown PetscBool final_ref; /* Run refinement at the end */ 18c4762a1bSJed Brown PetscBool final_diagnostics; /* Run diagnostics on the final mesh */ 19c4762a1bSJed Brown } AppCtx; 20c4762a1bSJed Brown 21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 22c4762a1bSJed Brown { 23c4762a1bSJed Brown PetscErrorCode ierr; 24c4762a1bSJed Brown 25c4762a1bSJed Brown PetscFunctionBegin; 26c4762a1bSJed Brown options->dim = 2; 27c4762a1bSJed Brown options->overlap = 0; 28c4762a1bSJed Brown options->testp4est[0] = PETSC_FALSE; 29c4762a1bSJed Brown options->testp4est[1] = PETSC_FALSE; 30c4762a1bSJed Brown options->redistribute = PETSC_FALSE; 31c4762a1bSJed Brown options->final_ref = PETSC_FALSE; 32c4762a1bSJed Brown options->final_diagnostics = PETSC_TRUE; 33c4762a1bSJed Brown 34c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr); 355f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3)); 365f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0)); 375f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL)); 385f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL)); 395f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL)); 405f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL)); 415f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL)); 421e1ea65dSPierre Jolivet ierr = PetscOptionsEnd();CHKERRQ(ierr); 43c4762a1bSJed Brown 445f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent)); 455f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshLoad", &options->stages[STAGE_LOAD])); 465f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE])); 475f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshRefine", &options->stages[STAGE_REFINE])); 485f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStageRegister("MeshOverlap", &options->stages[STAGE_OVERLAP])); 49c4762a1bSJed Brown PetscFunctionReturn(0); 50c4762a1bSJed Brown } 51c4762a1bSJed Brown 52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 53c4762a1bSJed Brown { 54c4762a1bSJed Brown PetscInt dim = user->dim; 55c4762a1bSJed Brown PetscBool testp4est_seq = user->testp4est[0]; 56c4762a1bSJed Brown PetscBool testp4est_par = user->testp4est[1]; 57c4762a1bSJed Brown PetscMPIInt rank, size; 58db2bf62eSStefano Zampini PetscBool periodic; 59c4762a1bSJed Brown 60c4762a1bSJed Brown PetscFunctionBegin; 615f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventBegin(user->createMeshEvent,0,0,0,0)); 625f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_rank(comm, &rank)); 635f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_size(comm, &size)); 645f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_LOAD])); 655f80ce2aSJacob Faibussowitsch CHKERRQ(DMCreate(comm, dm)); 665f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetType(*dm, DMPLEX)); 675f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(*dm, PETSC_FALSE)); 685f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 69db2bf62eSStefano Zampini 70db2bf62eSStefano Zampini /* For topologically periodic meshes, we first localize coordinates, 71db2bf62eSStefano Zampini and then remove any information related with the 72db2bf62eSStefano Zampini automatic computation of localized vertices. 73db2bf62eSStefano Zampini This way, refinement operations and conversions to p4est 74db2bf62eSStefano Zampini will preserve the shape of the domain in physical space */ 755f80ce2aSJacob Faibussowitsch CHKERRQ(DMLocalizeCoordinates(*dm)); 765f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL)); 775f80ce2aSJacob Faibussowitsch if (periodic) CHKERRQ(DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL)); 78db2bf62eSStefano Zampini 795f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm,NULL,"-init_dm_view")); 805f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetDimension(*dm, &dim)); 81c4762a1bSJed Brown 82c4762a1bSJed Brown if (testp4est_seq) { 83c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 84c4762a1bSJed Brown DM dmConv = NULL; 85c4762a1bSJed Brown 865f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 875f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 885f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 895f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 905f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 915f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 925f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 935f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX)); 945f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv)); 955f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 96c4762a1bSJed Brown if (dmConv) { 975f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 98c4762a1bSJed Brown *dm = dmConv; 99c4762a1bSJed Brown } 1005f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm,NULL,"-initref_dm_view")); 1015f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 1025f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 1035f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 1045f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 1055f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 1065f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 107c4762a1bSJed Brown 1085f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv)); 109c4762a1bSJed Brown if (dmConv) { 1105f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_")); 1115f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 1125f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 113c4762a1bSJed Brown *dm = dmConv; 114c4762a1bSJed Brown } 1155f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_")); 1165f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetUp(*dm)); 1175f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 1185f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,DMPLEX,&dmConv)); 119c4762a1bSJed Brown if (dmConv) { 1205f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_")); 1215f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE)); 1225f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 1235f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 124c4762a1bSJed Brown *dm = dmConv; 125c4762a1bSJed Brown } 1265f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_")); 1275f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 1285f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 129c4762a1bSJed Brown #else 130c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 131c4762a1bSJed Brown #endif 132c4762a1bSJed Brown } 133c4762a1bSJed Brown 1345f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 135c4762a1bSJed Brown if (!testp4est_seq) { 1365f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_DISTRIBUTE])); 1375f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view")); 1385f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_")); 1395f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 1405f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 1415f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 1425f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-distributed_dm_view")); 143c4762a1bSJed Brown } 1445f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_REFINE])); 1455f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_")); 1465f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 1475f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 1485f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 149c4762a1bSJed Brown 150c4762a1bSJed Brown if (testp4est_par) { 151c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 152c4762a1bSJed Brown DM dmConv = NULL; 153c4762a1bSJed Brown 1545f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view")); 1555f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 1565f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX)); 1575f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, PETSC_COMM_WORLD, &dmConv)); 1585f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 159c4762a1bSJed Brown if (dmConv) { 1605f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 161c4762a1bSJed Brown *dm = dmConv; 162c4762a1bSJed Brown } 1635f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_tobox_view")); 1645f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 1655f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 1665f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 1675f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 1685f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckPointSF(*dm)); 1695f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckInterfaceCones(*dm)); 170c4762a1bSJed Brown 1715f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv)); 172c4762a1bSJed Brown if (dmConv) { 1735f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_")); 1745f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 1755f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 176c4762a1bSJed Brown *dm = dmConv; 177c4762a1bSJed Brown } 1785f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_")); 1795f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetUp(*dm)); 1805f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 1815f80ce2aSJacob Faibussowitsch CHKERRQ(DMConvert(*dm, DMPLEX, &dmConv)); 182c4762a1bSJed Brown if (dmConv) { 1835f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_")); 1845f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeSetDefault(dmConv, PETSC_FALSE)); 1855f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(dmConv)); 1865f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 187c4762a1bSJed Brown *dm = dmConv; 188c4762a1bSJed Brown } 1895f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_")); 1905f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 1915f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL)); 192c4762a1bSJed Brown #else 193c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 194c4762a1bSJed Brown #endif 195c4762a1bSJed Brown } 196c4762a1bSJed Brown 197c4762a1bSJed Brown /* test redistribution of an already distributed mesh */ 198c4762a1bSJed Brown if (user->redistribute) { 199c4762a1bSJed Brown DM distributedMesh; 2000a19bb7dSprj- PetscSF sf; 2010a19bb7dSprj- PetscInt nranks; 202c4762a1bSJed Brown 2035f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view")); 2045f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistribute(*dm, 0, NULL, &distributedMesh)); 205c4762a1bSJed Brown if (distributedMesh) { 2065f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetPointSF(distributedMesh, &sf)); 2075f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSFSetUp(sf)); 2085f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetNeighbors(distributedMesh, &nranks, NULL)); 2095f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm))); 2105f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks)); 2115f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 212c4762a1bSJed Brown *dm = distributedMesh; 213c4762a1bSJed Brown } 2145f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_redist_view")); 215c4762a1bSJed Brown } 216c4762a1bSJed Brown 217c4762a1bSJed Brown if (user->overlap) { 218c4762a1bSJed Brown DM overlapMesh = NULL; 219c4762a1bSJed Brown 220c4762a1bSJed Brown /* Add the overlap to refined mesh */ 2215f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePush(user->stages[STAGE_OVERLAP])); 2225f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view")); 2235f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh)); 224c4762a1bSJed Brown if (overlapMesh) { 225c4762a1bSJed Brown PetscInt overlap; 2265f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetOverlap(overlapMesh, &overlap)); 2275f80ce2aSJacob Faibussowitsch CHKERRQ(PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap)); 2285f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 229c4762a1bSJed Brown *dm = overlapMesh; 230c4762a1bSJed Brown } 2315f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view")); 2325f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogStagePop()); 233c4762a1bSJed Brown } 234c4762a1bSJed Brown if (user->final_ref) { 235c4762a1bSJed Brown DM refinedMesh = NULL; 236c4762a1bSJed Brown 2375f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexSetRefinementUniform(*dm, PETSC_TRUE)); 2385f80ce2aSJacob Faibussowitsch CHKERRQ(DMRefine(*dm, comm, &refinedMesh)); 239c4762a1bSJed Brown if (refinedMesh) { 2405f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(dm)); 241c4762a1bSJed Brown *dm = refinedMesh; 242c4762a1bSJed Brown } 243c4762a1bSJed Brown } 244c4762a1bSJed Brown 2455f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetName((PetscObject) *dm, "Generated Mesh")); 2465f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 247c4762a1bSJed Brown if (user->final_diagnostics) { 248c4762a1bSJed Brown DMPlexInterpolatedFlag interpolated; 249c4762a1bSJed Brown PetscInt dim, depth; 250c4762a1bSJed Brown 2515f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetDimension(*dm, &dim)); 2525f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetDepth(*dm, &depth)); 2535f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexIsInterpolatedCollective(*dm, &interpolated)); 254c4762a1bSJed Brown 2555f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSymmetry(*dm)); 256c4762a1bSJed Brown if (interpolated == DMPLEX_INTERPOLATED_FULL) { 2575f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckFaces(*dm, 0)); 258c4762a1bSJed Brown } 2595f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckSkeleton(*dm, 0)); 2605f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexCheckGeometry(*dm)); 261c4762a1bSJed Brown } 2625f80ce2aSJacob Faibussowitsch CHKERRQ(PetscLogEventEnd(user->createMeshEvent,0,0,0,0)); 263c4762a1bSJed Brown PetscFunctionReturn(0); 264c4762a1bSJed Brown } 265c4762a1bSJed Brown 266c4762a1bSJed Brown int main(int argc, char **argv) 267c4762a1bSJed Brown { 26830602db0SMatthew G. Knepley DM dm; 26930602db0SMatthew G. Knepley AppCtx user; 270c4762a1bSJed Brown 271*b122ec5aSJacob Faibussowitsch CHKERRQ(PetscInitialize(&argc, &argv, NULL, help)); 2725f80ce2aSJacob Faibussowitsch CHKERRQ(ProcessOptions(PETSC_COMM_WORLD, &user)); 2735f80ce2aSJacob Faibussowitsch CHKERRQ(CreateMesh(PETSC_COMM_WORLD, &user, &dm)); 2745f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(&dm)); 275*b122ec5aSJacob Faibussowitsch CHKERRQ(PetscFinalize()); 276*b122ec5aSJacob Faibussowitsch return 0; 277c4762a1bSJed Brown } 278c4762a1bSJed Brown 279c4762a1bSJed Brown /*TEST 280c4762a1bSJed Brown 281c4762a1bSJed Brown # CTetGen 0-1 282c4762a1bSJed Brown test: 283c4762a1bSJed Brown suffix: 0 284c4762a1bSJed Brown requires: ctetgen 28530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys 286c4762a1bSJed Brown test: 287c4762a1bSJed Brown suffix: 1 288c4762a1bSJed Brown requires: ctetgen 28930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys 290c4762a1bSJed Brown 291c4762a1bSJed Brown # 2D LaTex and ASCII output 2-9 292c4762a1bSJed Brown test: 293c4762a1bSJed Brown suffix: 2 294c4762a1bSJed Brown requires: triangle 29530602db0SMatthew G. Knepley args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex 296c4762a1bSJed Brown test: 297c4762a1bSJed Brown suffix: 3 298c4762a1bSJed Brown requires: triangle 29930602db0SMatthew G. Knepley args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 300c4762a1bSJed Brown test: 301c4762a1bSJed Brown suffix: 4 302c4762a1bSJed Brown requires: triangle 303c4762a1bSJed Brown nsize: 2 30430602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail 305c4762a1bSJed Brown test: 306c4762a1bSJed Brown suffix: 5 307c4762a1bSJed Brown requires: triangle 308c4762a1bSJed Brown nsize: 2 30930602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 310c4762a1bSJed Brown test: 311c4762a1bSJed Brown suffix: 6 31230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail 313c4762a1bSJed Brown test: 314c4762a1bSJed Brown suffix: 7 31530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 316c4762a1bSJed Brown test: 317c4762a1bSJed Brown suffix: 8 318c4762a1bSJed Brown nsize: 2 31930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 320c4762a1bSJed Brown 321c4762a1bSJed Brown # 1D ASCII output 32230602db0SMatthew G. Knepley testset: 32330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all 324c4762a1bSJed Brown test: 325c4762a1bSJed Brown suffix: 1d_0 32630602db0SMatthew G. Knepley args: 327c4762a1bSJed Brown test: 328c4762a1bSJed Brown suffix: 1d_1 32930602db0SMatthew G. Knepley args: -ref_dm_refine 2 330c4762a1bSJed Brown test: 331c4762a1bSJed Brown suffix: 1d_2 33230602db0SMatthew G. Knepley args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic 333c4762a1bSJed Brown 334c4762a1bSJed Brown # Parallel refinement tests with overlap 335c4762a1bSJed Brown test: 336c4762a1bSJed Brown suffix: refine_overlap_1d 337c4762a1bSJed Brown nsize: 2 33830602db0SMatthew G. Knepley args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info 339c4762a1bSJed Brown test: 340c4762a1bSJed Brown suffix: refine_overlap_2d 341c4762a1bSJed Brown requires: triangle 342c4762a1bSJed Brown nsize: {{2 8}separate output} 34330602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info 344c4762a1bSJed Brown 345d410b0cfSMatthew G. Knepley # Parallel extrusion tests 346d410b0cfSMatthew G. Knepley test: 347d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded 348d410b0cfSMatthew G. Knepley nsize : 4 349d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \ 350d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 351d410b0cfSMatthew G. Knepley 352d410b0cfSMatthew G. Knepley test: 353d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded_symmetric 354d410b0cfSMatthew G. Knepley nsize : 4 355d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \ 356d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 357d410b0cfSMatthew G. Knepley 358c4762a1bSJed Brown # Parallel simple partitioner tests 359c4762a1bSJed Brown test: 360c4762a1bSJed Brown suffix: part_simple_0 361c4762a1bSJed Brown requires: triangle 362c4762a1bSJed Brown nsize: 2 36330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 364c4762a1bSJed Brown test: 365c4762a1bSJed Brown suffix: part_simple_1 366c4762a1bSJed Brown requires: triangle 367c4762a1bSJed Brown nsize: 8 36830602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 369c4762a1bSJed Brown 370c4762a1bSJed Brown # Parallel partitioner tests 371c4762a1bSJed Brown test: 372c4762a1bSJed Brown suffix: part_parmetis_0 373c4762a1bSJed Brown requires: parmetis 374c4762a1bSJed Brown nsize: 2 3755a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 376c4762a1bSJed Brown test: 377c4762a1bSJed Brown suffix: part_ptscotch_0 378c4762a1bSJed Brown requires: ptscotch 379c4762a1bSJed Brown nsize: 2 3805a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 381c4762a1bSJed Brown test: 382c4762a1bSJed Brown suffix: part_ptscotch_1 383c4762a1bSJed Brown requires: ptscotch 384c4762a1bSJed Brown nsize: 8 38530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1 386c4762a1bSJed Brown 387c4762a1bSJed Brown # CGNS reader tests 10-11 (need to find smaller test meshes) 388c4762a1bSJed Brown test: 389c4762a1bSJed Brown suffix: cgns_0 390c4762a1bSJed Brown requires: cgns 39130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view 392c4762a1bSJed Brown 393c4762a1bSJed Brown # Gmsh mesh reader tests 39430602db0SMatthew G. Knepley testset: 39530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view 39630602db0SMatthew G. Knepley 397c4762a1bSJed Brown test: 398c4762a1bSJed Brown suffix: gmsh_0 399c4762a1bSJed Brown requires: !single 40030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 401c4762a1bSJed Brown test: 402c4762a1bSJed Brown suffix: gmsh_1 403c4762a1bSJed Brown requires: !single 40430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh 405c4762a1bSJed Brown test: 406c4762a1bSJed Brown suffix: gmsh_2 407c4762a1bSJed Brown requires: !single 40830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh 409c4762a1bSJed Brown test: 410c4762a1bSJed Brown suffix: gmsh_3 411c4762a1bSJed Brown nsize: 3 412c4762a1bSJed Brown requires: !single 41330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple 414c4762a1bSJed Brown test: 415c4762a1bSJed Brown suffix: gmsh_4 416c4762a1bSJed Brown nsize: 3 417c4762a1bSJed Brown requires: !single 41830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple 419c4762a1bSJed Brown test: 420c4762a1bSJed Brown suffix: gmsh_5 421c4762a1bSJed Brown requires: !single 42230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh 423c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 424c4762a1bSJed Brown test: 425c4762a1bSJed Brown suffix: gmsh_6 426c4762a1bSJed Brown requires: !single 42730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0 428c4762a1bSJed Brown test: 429c4762a1bSJed Brown suffix: gmsh_7 43030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 431c4762a1bSJed Brown test: 432c4762a1bSJed Brown suffix: gmsh_8 43330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all 434c4762a1bSJed Brown testset: 43530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 436c4762a1bSJed Brown test: 437c4762a1bSJed Brown suffix: gmsh_9 438c4762a1bSJed Brown test: 439c4762a1bSJed Brown suffix: gmsh_9_periodic_0 440c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 441c4762a1bSJed Brown testset: 44230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all 443c4762a1bSJed Brown test: 444c4762a1bSJed Brown suffix: gmsh_10 445c4762a1bSJed Brown test: 446c4762a1bSJed Brown suffix: gmsh_10_periodic_0 447c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 448c4762a1bSJed Brown testset: 44930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1 450c4762a1bSJed Brown test: 451c4762a1bSJed Brown suffix: gmsh_11 452c4762a1bSJed Brown test: 453c4762a1bSJed Brown suffix: gmsh_11_periodic_0 454c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 455c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 456c4762a1bSJed Brown test: 457c4762a1bSJed Brown suffix: gmsh_12 458c4762a1bSJed Brown nsize: 4 459c4762a1bSJed Brown requires: !single mpiio 46030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 461c4762a1bSJed Brown test: 462c4762a1bSJed Brown suffix: gmsh_13_hybs2t 463c4762a1bSJed Brown nsize: 4 464012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 465c4762a1bSJed Brown test: 466c4762a1bSJed Brown suffix: gmsh_14_ext 467c4762a1bSJed Brown requires: !single 468d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all 469c4762a1bSJed Brown test: 470c4762a1bSJed Brown suffix: gmsh_14_ext_s2t 471c4762a1bSJed Brown requires: !single 472d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 473c4762a1bSJed Brown test: 474c4762a1bSJed Brown suffix: gmsh_15_hyb3d 47530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all 476c4762a1bSJed Brown test: 477c4762a1bSJed Brown suffix: gmsh_15_hyb3d_vtk 47830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all 479c4762a1bSJed Brown test: 480c4762a1bSJed Brown suffix: gmsh_15_hyb3d_s2t 481012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 482c4762a1bSJed Brown test: 483c4762a1bSJed Brown suffix: gmsh_16_spheresurface 484c4762a1bSJed Brown nsize : 4 48530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 486c4762a1bSJed Brown test: 487c4762a1bSJed Brown suffix: gmsh_16_spheresurface_s2t 488c4762a1bSJed Brown nsize : 4 489012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 490c4762a1bSJed Brown test: 491c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded 492c4762a1bSJed Brown nsize : 4 493d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 494c4762a1bSJed Brown test: 495c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded_s2t 496c4762a1bSJed Brown nsize : 4 497d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 498c4762a1bSJed Brown test: 499c4762a1bSJed Brown suffix: gmsh_17_hyb3d_interp_ascii 50030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all 501c4762a1bSJed Brown test: 502c4762a1bSJed Brown suffix: exodus_17_hyb3d_interp_ascii 503c4762a1bSJed Brown requires: exodusii 50430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all 505c4762a1bSJed Brown 506c4762a1bSJed Brown # Legacy Gmsh v22/v40 ascii/binary reader tests 507c4762a1bSJed Brown testset: 508c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_legacy.out 50930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 510c4762a1bSJed Brown test: 511c4762a1bSJed Brown suffix: gmsh_3d_ascii_v22 51230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2 513c4762a1bSJed Brown test: 514c4762a1bSJed Brown suffix: gmsh_3d_ascii_v40 51530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4 516c4762a1bSJed Brown test: 517c4762a1bSJed Brown suffix: gmsh_3d_binary_v22 51830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2 519c4762a1bSJed Brown test: 520c4762a1bSJed Brown suffix: gmsh_3d_binary_v40 521c4762a1bSJed Brown requires: long64 52230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4 523c4762a1bSJed Brown 524c4762a1bSJed Brown # Gmsh v41 ascii/binary reader tests 525c4762a1bSJed Brown testset: # 32bit mesh, sequential 52681a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 527c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32.out 528c4762a1bSJed Brown test: 529c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32 53030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 531c4762a1bSJed Brown test: 532c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32 53330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 534c4762a1bSJed Brown test: 535c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_mpiio 536dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 53730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 5388cd392daSMatthew G. Knepley test: 5398cd392daSMatthew G. Knepley suffix: gmsh_quad_8node 5408cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-qua-8node.msh \ 54181a1af93SMatthew G. Knepley -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices 5428cd392daSMatthew G. Knepley test: 5438cd392daSMatthew G. Knepley suffix: gmsh_hex_20node 5448cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-hex-20node.msh \ 54581a1af93SMatthew G. Knepley -dm_view -dm_plex_check_all -dm_plex_gmsh_mark_vertices 546c4762a1bSJed Brown testset: # 32bit mesh, parallel 54781a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 548c4762a1bSJed Brown nsize: 2 549c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32_np2.out 550c4762a1bSJed Brown test: 551c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32_np2 55230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 553c4762a1bSJed Brown test: 554c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2 55530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 556c4762a1bSJed Brown test: 557c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2_mpiio 558dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 55930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 560c4762a1bSJed Brown testset: # 64bit mesh, sequential 56181a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 562c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64.out 563c4762a1bSJed Brown test: 564c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64 56530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 566c4762a1bSJed Brown test: 567c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64 56830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 569c4762a1bSJed Brown test: 570c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_mpiio 571dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 57230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 573c4762a1bSJed Brown testset: # 64bit mesh, parallel 57481a1af93SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all -dm_plex_gmsh_mark_vertices 575c4762a1bSJed Brown nsize: 2 576c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64_np2.out 577c4762a1bSJed Brown test: 578c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64_np2 57930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 580c4762a1bSJed Brown test: 581c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2 58230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 583c4762a1bSJed Brown test: 584c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2_mpiio 585dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 58630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 587c4762a1bSJed Brown 588c4762a1bSJed Brown # Fluent mesh reader tests 589c4762a1bSJed Brown # TODO: Geometry checks fail 590c4762a1bSJed Brown test: 591c4762a1bSJed Brown suffix: fluent_0 592c4762a1bSJed Brown requires: !complex 59330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0 594c4762a1bSJed Brown test: 595c4762a1bSJed Brown suffix: fluent_1 596c4762a1bSJed Brown nsize: 3 597c4762a1bSJed Brown requires: !complex 59830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 599c4762a1bSJed Brown test: 600c4762a1bSJed Brown suffix: fluent_2 601c4762a1bSJed Brown requires: !complex 60230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0 603c4762a1bSJed Brown test: 604c4762a1bSJed Brown suffix: fluent_3 605c4762a1bSJed Brown requires: !complex 606c4762a1bSJed Brown TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382 60730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0 608c4762a1bSJed Brown 609c4762a1bSJed Brown # Med mesh reader tests, including parallel file reads 610c4762a1bSJed Brown test: 611c4762a1bSJed Brown suffix: med_0 612c4762a1bSJed Brown requires: med 61330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view 614c4762a1bSJed Brown test: 615c4762a1bSJed Brown suffix: med_1 616c4762a1bSJed Brown requires: med 617c4762a1bSJed Brown nsize: 3 61830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 619c4762a1bSJed Brown test: 620c4762a1bSJed Brown suffix: med_2 621c4762a1bSJed Brown requires: med 62230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view 623c4762a1bSJed Brown test: 624c4762a1bSJed Brown suffix: med_3 625c4762a1bSJed Brown requires: med 626c4762a1bSJed Brown TODO: MED 627c4762a1bSJed Brown nsize: 3 62830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 629c4762a1bSJed Brown 630c4762a1bSJed Brown # Test shape quality 631c4762a1bSJed Brown test: 632c4762a1bSJed Brown suffix: test_shape 633c4762a1bSJed Brown requires: ctetgen 63430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape 635c4762a1bSJed Brown 636c4762a1bSJed Brown # Test simplex to tensor conversion 637c4762a1bSJed Brown test: 638c4762a1bSJed Brown suffix: s2t2 639c4762a1bSJed Brown requires: triangle 640012bc364SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 641c4762a1bSJed Brown 642c4762a1bSJed Brown test: 643c4762a1bSJed Brown suffix: s2t3 644c4762a1bSJed Brown requires: ctetgen 645012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 646c4762a1bSJed Brown 64730602db0SMatthew G. Knepley # Test cylinder 64830602db0SMatthew G. Knepley testset: 64930602db0SMatthew G. Knepley args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view 650c4762a1bSJed Brown test: 651c4762a1bSJed Brown suffix: cylinder 65230602db0SMatthew G. Knepley args: -ref_dm_refine 1 653c4762a1bSJed Brown test: 654c4762a1bSJed Brown suffix: cylinder_per 65561a622f3SMatthew G. Knepley args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0 656c4762a1bSJed Brown test: 657c4762a1bSJed Brown suffix: cylinder_wedge 65861a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 659c4762a1bSJed Brown test: 660c4762a1bSJed Brown suffix: cylinder_wedge_int 661c4762a1bSJed Brown output_file: output/ex1_cylinder_wedge.out 66261a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 663c4762a1bSJed Brown 664c4762a1bSJed Brown test: 665c4762a1bSJed Brown suffix: box_2d 66630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 667c4762a1bSJed Brown 668c4762a1bSJed Brown test: 669c4762a1bSJed Brown suffix: box_2d_per 67030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 671c4762a1bSJed Brown 672c4762a1bSJed Brown test: 673c4762a1bSJed Brown suffix: box_2d_per_unint 67430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail 675c4762a1bSJed Brown 676c4762a1bSJed Brown test: 677c4762a1bSJed Brown suffix: box_3d 67830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view 679c4762a1bSJed Brown 680c4762a1bSJed Brown test: 681c4762a1bSJed Brown requires: triangle 682c4762a1bSJed Brown suffix: box_wedge 68361a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all 684c4762a1bSJed Brown 685c4762a1bSJed Brown testset: 686c4762a1bSJed Brown requires: triangle 687012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 688c4762a1bSJed Brown test: 689c4762a1bSJed Brown suffix: box_wedge_s2t 690c4762a1bSJed Brown test: 691c4762a1bSJed Brown nsize: 3 69230602db0SMatthew G. Knepley args: -dist_dm_distribute -petscpartitioner_type simple 693c4762a1bSJed Brown suffix: box_wedge_s2t_parallel 694c4762a1bSJed Brown 695c4762a1bSJed Brown # Test GLVis output 69630602db0SMatthew G. Knepley testset: 69730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 698c4762a1bSJed Brown test: 699c4762a1bSJed Brown suffix: glvis_2d_tet 70030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 701c4762a1bSJed Brown test: 702c4762a1bSJed Brown suffix: glvis_2d_tet_per 70330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 704c4762a1bSJed Brown test: 705c4762a1bSJed Brown suffix: glvis_3d_tet 70630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 70730602db0SMatthew G. Knepley testset: 70830602db0SMatthew G. Knepley args: -dm_coord_space 0 70930602db0SMatthew G. Knepley test: 71030602db0SMatthew G. Knepley suffix: glvis_2d_tet_per_mfem 71130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 71230602db0SMatthew G. Knepley test: 71330602db0SMatthew G. Knepley suffix: glvis_2d_quad 71430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis: 71530602db0SMatthew G. Knepley test: 71630602db0SMatthew G. Knepley suffix: glvis_2d_quad_per 71730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 71830602db0SMatthew G. Knepley test: 71930602db0SMatthew G. Knepley suffix: glvis_2d_quad_per_mfem 72030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 721c4762a1bSJed Brown test: 722c4762a1bSJed Brown suffix: glvis_3d_tet_per 72330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 724c4762a1bSJed Brown test: 725c4762a1bSJed Brown suffix: glvis_3d_tet_per_mfem 726c4762a1bSJed Brown TODO: broken 72730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 728c4762a1bSJed Brown test: 729c4762a1bSJed Brown suffix: glvis_3d_hex 73030602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis: 731c4762a1bSJed Brown test: 732c4762a1bSJed Brown suffix: glvis_3d_hex_per 73330602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 734c4762a1bSJed Brown test: 735c4762a1bSJed Brown suffix: glvis_3d_hex_per_mfem 73630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 73730602db0SMatthew G. Knepley test: 73830602db0SMatthew G. Knepley suffix: glvis_2d_hyb 73930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74030602db0SMatthew G. Knepley test: 74130602db0SMatthew G. Knepley suffix: glvis_3d_hyb 74230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74330602db0SMatthew G. Knepley test: 74430602db0SMatthew G. Knepley suffix: glvis_3d_hyb_s2t 745012bc364SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 746c4762a1bSJed Brown 747c4762a1bSJed Brown # Test P4EST 748c4762a1bSJed Brown testset: 749c4762a1bSJed Brown requires: p4est 75030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1 751c4762a1bSJed Brown test: 752c4762a1bSJed Brown suffix: p4est_periodic 75330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 754c4762a1bSJed Brown test: 755c4762a1bSJed Brown suffix: p4est_periodic_3d 75630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 757c4762a1bSJed Brown test: 758c4762a1bSJed Brown suffix: p4est_gmsh_periodic 75930602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 760c4762a1bSJed Brown test: 761c4762a1bSJed Brown suffix: p4est_gmsh_surface 76230602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 763c4762a1bSJed Brown test: 764c4762a1bSJed Brown suffix: p4est_gmsh_surface_parallel 765c4762a1bSJed Brown nsize: 2 76630602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance 767c4762a1bSJed Brown test: 768c4762a1bSJed Brown suffix: p4est_hyb_2d 76930602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 770c4762a1bSJed Brown test: 771c4762a1bSJed Brown suffix: p4est_hyb_3d 77230602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 773c4762a1bSJed Brown test: 774c4762a1bSJed Brown requires: ctetgen 775c4762a1bSJed Brown suffix: p4est_s2t_bugfaces_3d 77630602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1 777c4762a1bSJed Brown test: 778c4762a1bSJed Brown suffix: p4est_bug_overlapsf 779c4762a1bSJed Brown nsize: 3 78030602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple 781c4762a1bSJed Brown test: 782c4762a1bSJed Brown suffix: p4est_redistribute 783c4762a1bSJed Brown nsize: 3 7845a107427SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_view ::load_balance 785c4762a1bSJed Brown test: 786c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d 78730602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 788c4762a1bSJed Brown test: 789c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d_hash 79030602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 791c4762a1bSJed Brown test: 792c4762a1bSJed Brown requires: long_runtime 793c4762a1bSJed Brown suffix: p4est_gmsh_periodic_3d 79430602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 795c4762a1bSJed Brown 796c4762a1bSJed Brown testset: 797c4762a1bSJed Brown requires: p4est 798c4762a1bSJed Brown nsize: 6 79930602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute 800c4762a1bSJed Brown test: 80154fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 802c4762a1bSJed Brown suffix: p4est_par_periodic 80330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 804c4762a1bSJed Brown test: 80554fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 806c4762a1bSJed Brown suffix: p4est_par_periodic_3d 80730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 808c4762a1bSJed Brown test: 80954fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 810c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic 81130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 812c4762a1bSJed Brown test: 813c4762a1bSJed Brown suffix: p4est_par_gmsh_surface 81430602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 815c4762a1bSJed Brown test: 816c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d 81730602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 818c4762a1bSJed Brown test: 81954fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 820c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d_hash 82130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 822c4762a1bSJed Brown test: 823c4762a1bSJed Brown requires: long_runtime 824c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic_3d 82530602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 826c4762a1bSJed Brown 827c4762a1bSJed Brown testset: 828c4762a1bSJed Brown requires: p4est 829c4762a1bSJed Brown nsize: 6 83030602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple 831c4762a1bSJed Brown test: 832c4762a1bSJed Brown suffix: p4est_par_ovl_periodic 83330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 834c4762a1bSJed Brown #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled) 835c4762a1bSJed Brown test: 836c4762a1bSJed Brown suffix: p4est_par_ovl_periodic_3d 83730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0 838c4762a1bSJed Brown test: 839c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic 84030602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 841c4762a1bSJed Brown test: 842c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_surface 84330602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 844c4762a1bSJed Brown test: 845c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d 84630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 847c4762a1bSJed Brown test: 848c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d_hash 84930602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 850c4762a1bSJed Brown test: 851c4762a1bSJed Brown requires: long_runtime 852c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic_3d 85330602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 854c4762a1bSJed Brown test: 855c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_2d 85630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 857c4762a1bSJed Brown test: 858c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_3d 85930602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 860c4762a1bSJed Brown 861c4762a1bSJed Brown test: 862c4762a1bSJed Brown TODO: broken 863c4762a1bSJed Brown requires: p4est 864c4762a1bSJed Brown nsize: 2 865c4762a1bSJed Brown suffix: p4est_bug_labels_noovl 86630602db0SMatthew G. Knepley args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error 867c4762a1bSJed Brown 868c4762a1bSJed Brown test: 869c4762a1bSJed Brown requires: p4est 870c4762a1bSJed Brown nsize: 2 871c4762a1bSJed Brown suffix: p4est_bug_distribute_overlap 87230602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance 873c4762a1bSJed Brown args: -dm_post_overlap_view 874c4762a1bSJed Brown 875c4762a1bSJed Brown test: 876595782ffSMatthew G. Knepley suffix: ref_alfeld2d_0 877595782ffSMatthew G. Knepley requires: triangle 878012bc364SMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 879595782ffSMatthew G. Knepley test: 880595782ffSMatthew G. Knepley suffix: ref_alfeld3d_0 881595782ffSMatthew G. Knepley requires: ctetgen 882012bc364SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 883595782ffSMatthew G. Knepley 88409c713e7SStefano Zampini # Boundary layer refiners 88509c713e7SStefano Zampini test: 88609c713e7SStefano Zampini suffix: ref_bl_1 887d410b0cfSMatthew G. Knepley args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3 88809c713e7SStefano Zampini test: 88909c713e7SStefano Zampini suffix: ref_bl_2_tri 89009c713e7SStefano Zampini requires: triangle 891d410b0cfSMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89209c713e7SStefano Zampini test: 89309c713e7SStefano Zampini suffix: ref_bl_3_quad 894d410b0cfSMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89509c713e7SStefano Zampini test: 89609c713e7SStefano Zampini suffix: ref_bl_spheresurface_extruded 89709c713e7SStefano Zampini nsize : 4 898d410b0cfSMatthew G. Knepley args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2 89909c713e7SStefano Zampini test: 90009c713e7SStefano Zampini suffix: ref_bl_3d_hyb 90109c713e7SStefano Zampini nsize : 4 902012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1 9030e278f6aSMatthew G. Knepley 90430602db0SMatthew G. Knepley testset: 90530602db0SMatthew G. Knepley args: -dm_plex_shape sphere -dm_plex_check_all -dm_view 9060e278f6aSMatthew G. Knepley test: 9070e278f6aSMatthew G. Knepley suffix: sphere_0 90830602db0SMatthew G. Knepley args: 9090e278f6aSMatthew G. Knepley test: 9100e278f6aSMatthew G. Knepley suffix: sphere_1 91130602db0SMatthew G. Knepley args: -ref_dm_refine 2 9120e278f6aSMatthew G. Knepley test: 91368317524SMatthew G. Knepley suffix: sphere_2 91430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 91568317524SMatthew G. Knepley test: 91668317524SMatthew G. Knepley suffix: sphere_3 91730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 91868317524SMatthew G. Knepley 91968317524SMatthew G. Knepley test: 9200e278f6aSMatthew G. Knepley suffix: ball_0 9210e278f6aSMatthew G. Knepley requires: ctetgen 92230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view 9230e278f6aSMatthew G. Knepley 9240e278f6aSMatthew G. Knepley test: 9250e278f6aSMatthew G. Knepley suffix: ball_1 9260e278f6aSMatthew G. Knepley requires: ctetgen 92730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view 9280e278f6aSMatthew G. Knepley 9293fb88a6bSJed Brown test: 9303fb88a6bSJed Brown suffix: schwarz_p_extrude 9313fb88a6bSJed Brown args: -dm_plex_shape schwarz_p -dm_plex_tps_extent 1,1,1 -dm_plex_tps_layers 1 -dm_plex_tps_thickness .2 -dm_view 932c4762a1bSJed Brown TEST*/ 933