xref: /petsc/src/dm/impls/plex/tests/ex1.c (revision d410b0cf18e1798d3d4c14858e0c2ffdbe2fea69)
1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n";
2c4762a1bSJed Brown 
3c4762a1bSJed Brown #include <petscdmplex.h>
4012bc364SMatthew G. Knepley #include <petscdmplextransform.h>
50a19bb7dSprj- #include <petscsf.h>
6c4762a1bSJed Brown 
7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP};
8c4762a1bSJed Brown 
9c4762a1bSJed Brown typedef struct {
10c4762a1bSJed Brown   PetscLogEvent createMeshEvent;
11c4762a1bSJed Brown   PetscLogStage stages[4];
12c4762a1bSJed Brown   /* Domain and mesh definition */
13c4762a1bSJed Brown   PetscInt      dim;                             /* The topological mesh dimension */
14c4762a1bSJed Brown   PetscInt      overlap;                         /* The cell overlap to use during partitioning */
15c4762a1bSJed Brown   PetscBool     testp4est[2];
16c4762a1bSJed Brown   PetscBool     redistribute;
17c4762a1bSJed Brown   PetscBool     final_ref;                       /* Run refinement at the end */
18c4762a1bSJed Brown   PetscBool     final_diagnostics;               /* Run diagnostics on the final mesh */
19c4762a1bSJed Brown } AppCtx;
20c4762a1bSJed Brown 
21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)
22c4762a1bSJed Brown {
23c4762a1bSJed Brown   PetscErrorCode ierr;
24c4762a1bSJed Brown 
25c4762a1bSJed Brown   PetscFunctionBegin;
26c4762a1bSJed Brown   options->dim               = 2;
27c4762a1bSJed Brown   options->overlap           = 0;
28c4762a1bSJed Brown   options->testp4est[0]      = PETSC_FALSE;
29c4762a1bSJed Brown   options->testp4est[1]      = PETSC_FALSE;
30c4762a1bSJed Brown   options->redistribute      = PETSC_FALSE;
31c4762a1bSJed Brown   options->final_ref         = PETSC_FALSE;
32c4762a1bSJed Brown   options->final_diagnostics = PETSC_TRUE;
33c4762a1bSJed Brown 
34c4762a1bSJed Brown   ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr);
35c4762a1bSJed Brown   ierr = PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3);CHKERRQ(ierr);
36c4762a1bSJed Brown   ierr = PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0);CHKERRQ(ierr);
37c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL);CHKERRQ(ierr);
38c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL);CHKERRQ(ierr);
39c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL);CHKERRQ(ierr);
40c4762a1bSJed Brown   ierr = PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL);CHKERRQ(ierr);
41c4762a1bSJed Brown   ierr = PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL);CHKERRQ(ierr);
421e1ea65dSPierre Jolivet   ierr = PetscOptionsEnd();CHKERRQ(ierr);
43c4762a1bSJed Brown 
44c4762a1bSJed Brown   ierr = PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent);CHKERRQ(ierr);
45c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshLoad",       &options->stages[STAGE_LOAD]);CHKERRQ(ierr);
46c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr);
47c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshRefine",     &options->stages[STAGE_REFINE]);CHKERRQ(ierr);
48c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshOverlap",    &options->stages[STAGE_OVERLAP]);CHKERRQ(ierr);
49c4762a1bSJed Brown   PetscFunctionReturn(0);
50c4762a1bSJed Brown }
51c4762a1bSJed Brown 
52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)
53c4762a1bSJed Brown {
54c4762a1bSJed Brown   PetscInt       dim           = user->dim;
55c4762a1bSJed Brown   PetscBool      testp4est_seq = user->testp4est[0];
56c4762a1bSJed Brown   PetscBool      testp4est_par = user->testp4est[1];
57c4762a1bSJed Brown   PetscMPIInt    rank, size;
58db2bf62eSStefano Zampini   PetscBool      periodic;
59c4762a1bSJed Brown   PetscErrorCode ierr;
60c4762a1bSJed Brown 
61c4762a1bSJed Brown   PetscFunctionBegin;
62c4762a1bSJed Brown   ierr = PetscLogEventBegin(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr);
63ffc4695bSBarry Smith   ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr);
64ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm, &size);CHKERRMPI(ierr);
65c4762a1bSJed Brown   ierr = PetscLogStagePush(user->stages[STAGE_LOAD]);CHKERRQ(ierr);
6630602db0SMatthew G. Knepley   ierr = DMCreate(comm, dm);CHKERRQ(ierr);
6730602db0SMatthew G. Knepley   ierr = DMSetType(*dm, DMPLEX);CHKERRQ(ierr);
6830602db0SMatthew G. Knepley   ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
69db2bf62eSStefano Zampini 
70db2bf62eSStefano Zampini   /* For topologically periodic meshes, we first localize coordinates,
71db2bf62eSStefano Zampini      and then remove any information related with the
72db2bf62eSStefano Zampini      automatic computation of localized vertices.
73db2bf62eSStefano Zampini      This way, refinement operations and conversions to p4est
74db2bf62eSStefano Zampini      will preserve the shape of the domain in physical space */
75db2bf62eSStefano Zampini   ierr = DMLocalizeCoordinates(*dm);CHKERRQ(ierr);
76db2bf62eSStefano Zampini   ierr = DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL);CHKERRQ(ierr);
7730602db0SMatthew G. Knepley   if (periodic) {ierr = DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL);CHKERRQ(ierr);}
78db2bf62eSStefano Zampini 
79c4762a1bSJed Brown   ierr = DMViewFromOptions(*dm,NULL,"-init_dm_view");CHKERRQ(ierr);
80c4762a1bSJed Brown   ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr);
81c4762a1bSJed Brown 
82c4762a1bSJed Brown   if (testp4est_seq) {
83c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
84c4762a1bSJed Brown     DM dmConv = NULL;
85c4762a1bSJed Brown 
8654fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
8754fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
8854fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
8954fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
9054fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
9154fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
92c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
93012bc364SMatthew G. Knepley     ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr);
9454fcfd0cSMatthew G. Knepley     ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr);
95012bc364SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
96c4762a1bSJed Brown     if (dmConv) {
97c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
98c4762a1bSJed Brown       *dm  = dmConv;
99c4762a1bSJed Brown     }
10054fcfd0cSMatthew G. Knepley     ierr = DMViewFromOptions(*dm,NULL,"-initref_dm_view");CHKERRQ(ierr);
10154fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
10254fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
10354fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
10454fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
10554fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
10654fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
107c4762a1bSJed Brown 
108c4762a1bSJed Brown     ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr);
109c4762a1bSJed Brown     if (dmConv) {
110c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_");CHKERRQ(ierr);
111c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
112c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
113c4762a1bSJed Brown       *dm  = dmConv;
114c4762a1bSJed Brown     }
115c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_");CHKERRQ(ierr);
116c4762a1bSJed Brown     ierr = DMSetUp(*dm);CHKERRQ(ierr);
117c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
118c4762a1bSJed Brown     ierr = DMConvert(*dm,DMPLEX,&dmConv);CHKERRQ(ierr);
119c4762a1bSJed Brown     if (dmConv) {
120c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_");CHKERRQ(ierr);
121c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
122c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
123c4762a1bSJed Brown       *dm  = dmConv;
124c4762a1bSJed Brown     }
125c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_");CHKERRQ(ierr);
126c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
127c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
128c4762a1bSJed Brown #else
129c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
130c4762a1bSJed Brown #endif
131c4762a1bSJed Brown   }
132c4762a1bSJed Brown 
133c4762a1bSJed Brown   ierr = PetscLogStagePop();CHKERRQ(ierr);
134c4762a1bSJed Brown   if (!testp4est_seq) {
135c4762a1bSJed Brown     ierr = PetscLogStagePush(user->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr);
136c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view");CHKERRQ(ierr);
13730602db0SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_");CHKERRQ(ierr);
13830602db0SMatthew G. Knepley     ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
13930602db0SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
140c4762a1bSJed Brown     ierr = PetscLogStagePop();CHKERRQ(ierr);
141c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-distributed_dm_view");CHKERRQ(ierr);
142c4762a1bSJed Brown   }
143c4762a1bSJed Brown   ierr = PetscLogStagePush(user->stages[STAGE_REFINE]);CHKERRQ(ierr);
14430602db0SMatthew G. Knepley   ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_");CHKERRQ(ierr);
145c4762a1bSJed Brown   ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
14630602db0SMatthew G. Knepley   ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
147c4762a1bSJed Brown   ierr = PetscLogStagePop();CHKERRQ(ierr);
148c4762a1bSJed Brown 
149c4762a1bSJed Brown   if (testp4est_par) {
150c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
151c4762a1bSJed Brown     DM dmConv = NULL;
152c4762a1bSJed Brown 
15396ca5757SLisandro Dalcin     ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr);
154c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
155012bc364SMatthew G. Knepley     ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr);
15654fcfd0cSMatthew G. Knepley     ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr);
157012bc364SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
158c4762a1bSJed Brown     if (dmConv) {
159c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
160c4762a1bSJed Brown       *dm  = dmConv;
161c4762a1bSJed Brown     }
16296ca5757SLisandro Dalcin     ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr);
16354fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
16454fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
16554fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
16654fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
16754fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
16854fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
169c4762a1bSJed Brown 
170c4762a1bSJed Brown     ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr);
171c4762a1bSJed Brown     if (dmConv) {
172c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_");CHKERRQ(ierr);
173c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
174c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
175c4762a1bSJed Brown       *dm  = dmConv;
176c4762a1bSJed Brown     }
177c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_");CHKERRQ(ierr);
178c4762a1bSJed Brown     ierr = DMSetUp(*dm);CHKERRQ(ierr);
179c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
180c4762a1bSJed Brown     ierr = DMConvert(*dm, DMPLEX, &dmConv);CHKERRQ(ierr);
181c4762a1bSJed Brown     if (dmConv) {
182c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_");CHKERRQ(ierr);
183c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
184c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
185c4762a1bSJed Brown       *dm  = dmConv;
186c4762a1bSJed Brown     }
187c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_");CHKERRQ(ierr);
188c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
189c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
190c4762a1bSJed Brown #else
191c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
192c4762a1bSJed Brown #endif
193c4762a1bSJed Brown   }
194c4762a1bSJed Brown 
195c4762a1bSJed Brown   /* test redistribution of an already distributed mesh */
196c4762a1bSJed Brown   if (user->redistribute) {
197c4762a1bSJed Brown     DM       distributedMesh;
1980a19bb7dSprj-     PetscSF  sf;
1990a19bb7dSprj-     PetscInt nranks;
200c4762a1bSJed Brown 
201c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view");CHKERRQ(ierr);
202c4762a1bSJed Brown     ierr = DMPlexDistribute(*dm, 0, NULL, &distributedMesh);CHKERRQ(ierr);
203c4762a1bSJed Brown     if (distributedMesh) {
2040a19bb7dSprj-       ierr = DMGetPointSF(distributedMesh, &sf);CHKERRQ(ierr);
2050a19bb7dSprj-       ierr = PetscSFSetUp(sf);CHKERRQ(ierr);
2060a19bb7dSprj-       ierr = DMGetNeighbors(distributedMesh, &nranks, NULL);CHKERRQ(ierr);
207ffc4695bSBarry Smith       ierr = MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm));CHKERRMPI(ierr);
2080a19bb7dSprj-       ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks);CHKERRQ(ierr);
209c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
210c4762a1bSJed Brown       *dm  = distributedMesh;
211c4762a1bSJed Brown     }
212c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_post_redist_view");CHKERRQ(ierr);
213c4762a1bSJed Brown   }
214c4762a1bSJed Brown 
215c4762a1bSJed Brown   if (user->overlap) {
216c4762a1bSJed Brown     DM overlapMesh = NULL;
217c4762a1bSJed Brown 
218c4762a1bSJed Brown     /* Add the overlap to refined mesh */
219c4762a1bSJed Brown     ierr = PetscLogStagePush(user->stages[STAGE_OVERLAP]);CHKERRQ(ierr);
220c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view");CHKERRQ(ierr);
221c4762a1bSJed Brown     ierr = DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh);CHKERRQ(ierr);
222c4762a1bSJed Brown     if (overlapMesh) {
223c4762a1bSJed Brown       PetscInt overlap;
224c4762a1bSJed Brown       ierr = DMPlexGetOverlap(overlapMesh, &overlap);CHKERRQ(ierr);
225c4762a1bSJed Brown       ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap);CHKERRQ(ierr);
226c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
227c4762a1bSJed Brown       *dm = overlapMesh;
228c4762a1bSJed Brown     }
229c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view");CHKERRQ(ierr);
230c4762a1bSJed Brown     ierr = PetscLogStagePop();CHKERRQ(ierr);
231c4762a1bSJed Brown   }
232c4762a1bSJed Brown   if (user->final_ref) {
233c4762a1bSJed Brown     DM refinedMesh = NULL;
234c4762a1bSJed Brown 
235c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
236c4762a1bSJed Brown     ierr = DMRefine(*dm, comm, &refinedMesh);CHKERRQ(ierr);
237c4762a1bSJed Brown     if (refinedMesh) {
238c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
239c4762a1bSJed Brown       *dm  = refinedMesh;
240c4762a1bSJed Brown     }
241c4762a1bSJed Brown   }
242c4762a1bSJed Brown 
24352b05773SJed Brown   ierr = PetscObjectSetName((PetscObject) *dm, "Generated Mesh");CHKERRQ(ierr);
244c4762a1bSJed Brown   ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
245c4762a1bSJed Brown   if (user->final_diagnostics) {
246c4762a1bSJed Brown     DMPlexInterpolatedFlag interpolated;
247c4762a1bSJed Brown     PetscInt  dim, depth;
248c4762a1bSJed Brown 
249c4762a1bSJed Brown     ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr);
250c4762a1bSJed Brown     ierr = DMPlexGetDepth(*dm, &depth);CHKERRQ(ierr);
251c4762a1bSJed Brown     ierr = DMPlexIsInterpolatedCollective(*dm, &interpolated);CHKERRQ(ierr);
252c4762a1bSJed Brown 
253c4762a1bSJed Brown     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
254c4762a1bSJed Brown     if (interpolated == DMPLEX_INTERPOLATED_FULL) {
255c4762a1bSJed Brown       ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
256c4762a1bSJed Brown     }
257c4762a1bSJed Brown     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
258c4762a1bSJed Brown     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
259c4762a1bSJed Brown   }
260c4762a1bSJed Brown   ierr = PetscLogEventEnd(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr);
261c4762a1bSJed Brown   PetscFunctionReturn(0);
262c4762a1bSJed Brown }
263c4762a1bSJed Brown 
264c4762a1bSJed Brown int main(int argc, char **argv)
265c4762a1bSJed Brown {
26630602db0SMatthew G. Knepley   DM             dm;
26730602db0SMatthew G. Knepley   AppCtx         user;
268c4762a1bSJed Brown   PetscErrorCode ierr;
269c4762a1bSJed Brown 
270c4762a1bSJed Brown   ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr;
271c4762a1bSJed Brown   ierr = ProcessOptions(PETSC_COMM_WORLD, &user);CHKERRQ(ierr);
27230602db0SMatthew G. Knepley   ierr = CreateMesh(PETSC_COMM_WORLD, &user, &dm);CHKERRQ(ierr);
27330602db0SMatthew G. Knepley   ierr = DMDestroy(&dm);CHKERRQ(ierr);
274c4762a1bSJed Brown   ierr = PetscFinalize();
275c4762a1bSJed Brown   return ierr;
276c4762a1bSJed Brown }
277c4762a1bSJed Brown 
278c4762a1bSJed Brown /*TEST
279c4762a1bSJed Brown 
280c4762a1bSJed Brown   # CTetGen 0-1
281c4762a1bSJed Brown   test:
282c4762a1bSJed Brown     suffix: 0
283c4762a1bSJed Brown     requires: ctetgen
28430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys
285c4762a1bSJed Brown   test:
286c4762a1bSJed Brown     suffix: 1
287c4762a1bSJed Brown     requires: ctetgen
28830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys
289c4762a1bSJed Brown 
290c4762a1bSJed Brown   # 2D LaTex and ASCII output 2-9
291c4762a1bSJed Brown   test:
292c4762a1bSJed Brown     suffix: 2
293c4762a1bSJed Brown     requires: triangle
29430602db0SMatthew G. Knepley     args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex
295c4762a1bSJed Brown   test:
296c4762a1bSJed Brown     suffix: 3
297c4762a1bSJed Brown     requires: triangle
29830602db0SMatthew G. Knepley     args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
299c4762a1bSJed Brown   test:
300c4762a1bSJed Brown     suffix: 4
301c4762a1bSJed Brown     requires: triangle
302c4762a1bSJed Brown     nsize: 2
30330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail
304c4762a1bSJed Brown   test:
305c4762a1bSJed Brown     suffix: 5
306c4762a1bSJed Brown     requires: triangle
307c4762a1bSJed Brown     nsize: 2
30830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
309c4762a1bSJed Brown   test:
310c4762a1bSJed Brown     suffix: 6
31130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail
312c4762a1bSJed Brown   test:
313c4762a1bSJed Brown     suffix: 7
31430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
315c4762a1bSJed Brown   test:
316c4762a1bSJed Brown     suffix: 8
317c4762a1bSJed Brown     nsize: 2
31830602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
319c4762a1bSJed Brown 
320c4762a1bSJed Brown   # 1D ASCII output
32130602db0SMatthew G. Knepley   testset:
32230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all
323c4762a1bSJed Brown     test:
324c4762a1bSJed Brown       suffix: 1d_0
32530602db0SMatthew G. Knepley       args:
326c4762a1bSJed Brown     test:
327c4762a1bSJed Brown       suffix: 1d_1
32830602db0SMatthew G. Knepley       args: -ref_dm_refine 2
329c4762a1bSJed Brown     test:
330c4762a1bSJed Brown       suffix: 1d_2
33130602db0SMatthew G. Knepley       args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic
332c4762a1bSJed Brown 
333c4762a1bSJed Brown   # Parallel refinement tests with overlap
334c4762a1bSJed Brown   test:
335c4762a1bSJed Brown     suffix: refine_overlap_1d
336c4762a1bSJed Brown     nsize: 2
33730602db0SMatthew G. Knepley     args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info
338c4762a1bSJed Brown   test:
339c4762a1bSJed Brown     suffix: refine_overlap_2d
340c4762a1bSJed Brown     requires: triangle
341c4762a1bSJed Brown     nsize: {{2 8}separate output}
34230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info
343c4762a1bSJed Brown 
344*d410b0cfSMatthew G. Knepley   # Parallel extrusion tests
345*d410b0cfSMatthew G. Knepley   test:
346*d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded
347*d410b0cfSMatthew G. Knepley     nsize : 4
348*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \
349*d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
350*d410b0cfSMatthew G. Knepley 
351*d410b0cfSMatthew G. Knepley   test:
352*d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded_symmetric
353*d410b0cfSMatthew G. Knepley     nsize : 4
354*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \
355*d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
356*d410b0cfSMatthew G. Knepley 
357c4762a1bSJed Brown   # Parallel simple partitioner tests
358c4762a1bSJed Brown   test:
359c4762a1bSJed Brown     suffix: part_simple_0
360c4762a1bSJed Brown     requires: triangle
361c4762a1bSJed Brown     nsize: 2
36230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
363c4762a1bSJed Brown   test:
364c4762a1bSJed Brown     suffix: part_simple_1
365c4762a1bSJed Brown     requires: triangle
366c4762a1bSJed Brown     nsize: 8
36730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
368c4762a1bSJed Brown 
369c4762a1bSJed Brown   # Parallel partitioner tests
370c4762a1bSJed Brown   test:
371c4762a1bSJed Brown     suffix: part_parmetis_0
372c4762a1bSJed Brown     requires: parmetis
373c4762a1bSJed Brown     nsize: 2
37430602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
375c4762a1bSJed Brown   test:
376c4762a1bSJed Brown     suffix: part_ptscotch_0
377c4762a1bSJed Brown     requires: ptscotch
378c4762a1bSJed Brown     nsize: 2
37930602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
380c4762a1bSJed Brown   test:
381c4762a1bSJed Brown     suffix: part_ptscotch_1
382c4762a1bSJed Brown     requires: ptscotch
383c4762a1bSJed Brown     nsize: 8
38430602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1
385c4762a1bSJed Brown 
386c4762a1bSJed Brown   # CGNS reader tests 10-11 (need to find smaller test meshes)
387c4762a1bSJed Brown   test:
388c4762a1bSJed Brown     suffix: cgns_0
389c4762a1bSJed Brown     requires: cgns
39030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view
391c4762a1bSJed Brown 
392c4762a1bSJed Brown   # Gmsh mesh reader tests
39330602db0SMatthew G. Knepley   testset:
39430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view
39530602db0SMatthew G. Knepley 
396c4762a1bSJed Brown     test:
397c4762a1bSJed Brown       suffix: gmsh_0
398c4762a1bSJed Brown       requires: !single
39930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
400c4762a1bSJed Brown     test:
401c4762a1bSJed Brown       suffix: gmsh_1
402c4762a1bSJed Brown       requires: !single
40330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh
404c4762a1bSJed Brown     test:
405c4762a1bSJed Brown       suffix: gmsh_2
406c4762a1bSJed Brown       requires: !single
40730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh
408c4762a1bSJed Brown     test:
409c4762a1bSJed Brown       suffix: gmsh_3
410c4762a1bSJed Brown       nsize: 3
411c4762a1bSJed Brown       requires: !single
41230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple
413c4762a1bSJed Brown     test:
414c4762a1bSJed Brown       suffix: gmsh_4
415c4762a1bSJed Brown       nsize: 3
416c4762a1bSJed Brown       requires: !single
41730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple
418c4762a1bSJed Brown     test:
419c4762a1bSJed Brown       suffix: gmsh_5
420c4762a1bSJed Brown       requires: !single
42130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh
422c4762a1bSJed Brown     # TODO: it seems the mesh is not a valid gmsh (inverted cell)
423c4762a1bSJed Brown     test:
424c4762a1bSJed Brown       suffix: gmsh_6
425c4762a1bSJed Brown       requires: !single
42630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0
427c4762a1bSJed Brown     test:
428c4762a1bSJed Brown       suffix: gmsh_7
42930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
430c4762a1bSJed Brown     test:
431c4762a1bSJed Brown       suffix: gmsh_8
43230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all
433c4762a1bSJed Brown   testset:
43430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
435c4762a1bSJed Brown     test:
436c4762a1bSJed Brown       suffix: gmsh_9
437c4762a1bSJed Brown     test:
438c4762a1bSJed Brown       suffix: gmsh_9_periodic_0
439c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
440c4762a1bSJed Brown   testset:
44130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all
442c4762a1bSJed Brown     test:
443c4762a1bSJed Brown       suffix: gmsh_10
444c4762a1bSJed Brown     test:
445c4762a1bSJed Brown       suffix: gmsh_10_periodic_0
446c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
447c4762a1bSJed Brown   testset:
44830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1
449c4762a1bSJed Brown     test:
450c4762a1bSJed Brown       suffix: gmsh_11
451c4762a1bSJed Brown     test:
452c4762a1bSJed Brown       suffix: gmsh_11_periodic_0
453c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
454c4762a1bSJed Brown   # TODO: it seems the mesh is not a valid gmsh (inverted cell)
455c4762a1bSJed Brown   test:
456c4762a1bSJed Brown     suffix: gmsh_12
457c4762a1bSJed Brown     nsize: 4
458c4762a1bSJed Brown     requires: !single mpiio
45930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
460c4762a1bSJed Brown   test:
461c4762a1bSJed Brown     suffix: gmsh_13_hybs2t
462c4762a1bSJed Brown     nsize: 4
463012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
464c4762a1bSJed Brown   test:
465c4762a1bSJed Brown     suffix: gmsh_14_ext
466c4762a1bSJed Brown     requires: !single
467*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all
468c4762a1bSJed Brown   test:
469c4762a1bSJed Brown     suffix: gmsh_14_ext_s2t
470c4762a1bSJed Brown     requires: !single
471*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
472c4762a1bSJed Brown   test:
473c4762a1bSJed Brown     suffix: gmsh_15_hyb3d
47430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all
475c4762a1bSJed Brown   test:
476c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_vtk
47730602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all
478c4762a1bSJed Brown   test:
479c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_s2t
480012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
481c4762a1bSJed Brown   test:
482c4762a1bSJed Brown     suffix: gmsh_16_spheresurface
483c4762a1bSJed Brown     nsize : 4
48430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
485c4762a1bSJed Brown   test:
486c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_s2t
487c4762a1bSJed Brown     nsize : 4
488012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
489c4762a1bSJed Brown   test:
490c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded
491c4762a1bSJed Brown     nsize : 4
492*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
493c4762a1bSJed Brown   test:
494c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded_s2t
495c4762a1bSJed Brown     nsize : 4
496*d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
497c4762a1bSJed Brown   test:
498c4762a1bSJed Brown     suffix: gmsh_17_hyb3d_interp_ascii
49930602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all
500c4762a1bSJed Brown   test:
501c4762a1bSJed Brown     suffix: exodus_17_hyb3d_interp_ascii
502c4762a1bSJed Brown     requires: exodusii
50330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all
504c4762a1bSJed Brown 
505c4762a1bSJed Brown   # Legacy Gmsh v22/v40 ascii/binary reader tests
506c4762a1bSJed Brown   testset:
507c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_legacy.out
50830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
509c4762a1bSJed Brown     test:
510c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v22
51130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2
512c4762a1bSJed Brown     test:
513c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v40
51430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4
515c4762a1bSJed Brown     test:
516c4762a1bSJed Brown       suffix: gmsh_3d_binary_v22
51730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2
518c4762a1bSJed Brown     test:
519c4762a1bSJed Brown       suffix: gmsh_3d_binary_v40
520c4762a1bSJed Brown       requires: long64
52130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4
522c4762a1bSJed Brown 
523c4762a1bSJed Brown   # Gmsh v41 ascii/binary reader tests
524c4762a1bSJed Brown   testset: # 32bit mesh, sequential
52530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
526c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32.out
527c4762a1bSJed Brown     test:
528c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32
52930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
530c4762a1bSJed Brown     test:
531c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32
53230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
533c4762a1bSJed Brown     test:
534c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_mpiio
535dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
53630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
537c4762a1bSJed Brown   testset:  # 32bit mesh, parallel
53830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all
539c4762a1bSJed Brown     nsize: 2
540c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32_np2.out
541c4762a1bSJed Brown     test:
542c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32_np2
54330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
544c4762a1bSJed Brown     test:
545c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2
54630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
547c4762a1bSJed Brown     test:
548c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2_mpiio
549dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
55030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
551c4762a1bSJed Brown   testset: # 64bit mesh, sequential
55230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
553c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64.out
554c4762a1bSJed Brown     test:
555c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64
55630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
557c4762a1bSJed Brown     test:
558c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64
55930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
560c4762a1bSJed Brown     test:
561c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_mpiio
562dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
56330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
564c4762a1bSJed Brown   testset:  # 64bit mesh, parallel
56530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all
566c4762a1bSJed Brown     nsize: 2
567c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64_np2.out
568c4762a1bSJed Brown     test:
569c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64_np2
57030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
571c4762a1bSJed Brown     test:
572c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2
57330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
574c4762a1bSJed Brown     test:
575c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2_mpiio
576dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
57730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
578c4762a1bSJed Brown 
579c4762a1bSJed Brown   # Fluent mesh reader tests
580c4762a1bSJed Brown   # TODO: Geometry checks fail
581c4762a1bSJed Brown   test:
582c4762a1bSJed Brown     suffix: fluent_0
583c4762a1bSJed Brown     requires: !complex
58430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0
585c4762a1bSJed Brown   test:
586c4762a1bSJed Brown     suffix: fluent_1
587c4762a1bSJed Brown     nsize: 3
588c4762a1bSJed Brown     requires: !complex
58930602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
590c4762a1bSJed Brown   test:
591c4762a1bSJed Brown     suffix: fluent_2
592c4762a1bSJed Brown     requires: !complex
59330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0
594c4762a1bSJed Brown   test:
595c4762a1bSJed Brown     suffix: fluent_3
596c4762a1bSJed Brown     requires: !complex
597c4762a1bSJed Brown     TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382
59830602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0
599c4762a1bSJed Brown 
600c4762a1bSJed Brown   # Med mesh reader tests, including parallel file reads
601c4762a1bSJed Brown   test:
602c4762a1bSJed Brown     suffix: med_0
603c4762a1bSJed Brown     requires: med
60430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view
605c4762a1bSJed Brown   test:
606c4762a1bSJed Brown     suffix: med_1
607c4762a1bSJed Brown     requires: med
608c4762a1bSJed Brown     nsize: 3
60930602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
610c4762a1bSJed Brown   test:
611c4762a1bSJed Brown     suffix: med_2
612c4762a1bSJed Brown     requires: med
61330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view
614c4762a1bSJed Brown   test:
615c4762a1bSJed Brown     suffix: med_3
616c4762a1bSJed Brown     requires: med
617c4762a1bSJed Brown     TODO: MED
618c4762a1bSJed Brown     nsize: 3
61930602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
620c4762a1bSJed Brown 
621c4762a1bSJed Brown   # Test shape quality
622c4762a1bSJed Brown   test:
623c4762a1bSJed Brown     suffix: test_shape
624c4762a1bSJed Brown     requires: ctetgen
62530602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape
626c4762a1bSJed Brown 
627c4762a1bSJed Brown   # Test simplex to tensor conversion
628c4762a1bSJed Brown   test:
629c4762a1bSJed Brown     suffix: s2t2
630c4762a1bSJed Brown     requires: triangle
631012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
632c4762a1bSJed Brown 
633c4762a1bSJed Brown   test:
634c4762a1bSJed Brown     suffix: s2t3
635c4762a1bSJed Brown     requires: ctetgen
636012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
637c4762a1bSJed Brown 
63830602db0SMatthew G. Knepley   # Test cylinder
63930602db0SMatthew G. Knepley   testset:
64030602db0SMatthew G. Knepley     args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view
641c4762a1bSJed Brown     test:
642c4762a1bSJed Brown       suffix: cylinder
64330602db0SMatthew G. Knepley       args: -ref_dm_refine 1
644c4762a1bSJed Brown     test:
645c4762a1bSJed Brown       suffix: cylinder_per
64661a622f3SMatthew G. Knepley       args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0
647c4762a1bSJed Brown     test:
648c4762a1bSJed Brown       suffix: cylinder_wedge
64961a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
650c4762a1bSJed Brown     test:
651c4762a1bSJed Brown       suffix: cylinder_wedge_int
652c4762a1bSJed Brown       output_file: output/ex1_cylinder_wedge.out
65361a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
654c4762a1bSJed Brown 
655c4762a1bSJed Brown   test:
656c4762a1bSJed Brown     suffix: box_2d
65730602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
658c4762a1bSJed Brown 
659c4762a1bSJed Brown   test:
660c4762a1bSJed Brown     suffix: box_2d_per
66130602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
662c4762a1bSJed Brown 
663c4762a1bSJed Brown   test:
664c4762a1bSJed Brown     suffix: box_2d_per_unint
66530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail
666c4762a1bSJed Brown 
667c4762a1bSJed Brown   test:
668c4762a1bSJed Brown     suffix: box_3d
66930602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view
670c4762a1bSJed Brown 
671c4762a1bSJed Brown   test:
672c4762a1bSJed Brown     requires: triangle
673c4762a1bSJed Brown     suffix: box_wedge
67461a622f3SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all
675c4762a1bSJed Brown 
676c4762a1bSJed Brown   testset:
677c4762a1bSJed Brown     requires: triangle
678012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
679c4762a1bSJed Brown     test:
680c4762a1bSJed Brown       suffix: box_wedge_s2t
681c4762a1bSJed Brown     test:
682c4762a1bSJed Brown       nsize: 3
68330602db0SMatthew G. Knepley       args: -dist_dm_distribute -petscpartitioner_type simple
684c4762a1bSJed Brown       suffix: box_wedge_s2t_parallel
685c4762a1bSJed Brown 
686c4762a1bSJed Brown   # Test GLVis output
68730602db0SMatthew G. Knepley   testset:
68830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0
689c4762a1bSJed Brown     test:
690c4762a1bSJed Brown       suffix: glvis_2d_tet
69130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
692c4762a1bSJed Brown     test:
693c4762a1bSJed Brown       suffix: glvis_2d_tet_per
69430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
695c4762a1bSJed Brown     test:
696c4762a1bSJed Brown       suffix: glvis_3d_tet
69730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
69830602db0SMatthew G. Knepley   testset:
69930602db0SMatthew G. Knepley     args: -dm_coord_space 0
70030602db0SMatthew G. Knepley     test:
70130602db0SMatthew G. Knepley       suffix: glvis_2d_tet_per_mfem
70230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
70330602db0SMatthew G. Knepley     test:
70430602db0SMatthew G. Knepley       suffix: glvis_2d_quad
70530602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis:
70630602db0SMatthew G. Knepley     test:
70730602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per
70830602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
70930602db0SMatthew G. Knepley     test:
71030602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per_mfem
71130602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
712c4762a1bSJed Brown     test:
713c4762a1bSJed Brown       suffix: glvis_3d_tet_per
71430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
715c4762a1bSJed Brown     test:
716c4762a1bSJed Brown       suffix: glvis_3d_tet_per_mfem
717c4762a1bSJed Brown       TODO: broken
71830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
719c4762a1bSJed Brown     test:
720c4762a1bSJed Brown       suffix: glvis_3d_hex
72130602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis:
722c4762a1bSJed Brown     test:
723c4762a1bSJed Brown       suffix: glvis_3d_hex_per
72430602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
725c4762a1bSJed Brown     test:
726c4762a1bSJed Brown       suffix: glvis_3d_hex_per_mfem
72730602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
72830602db0SMatthew G. Knepley     test:
72930602db0SMatthew G. Knepley       suffix: glvis_2d_hyb
73030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
73130602db0SMatthew G. Knepley     test:
73230602db0SMatthew G. Knepley       suffix: glvis_3d_hyb
73330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
73430602db0SMatthew G. Knepley     test:
73530602db0SMatthew G. Knepley       suffix: glvis_3d_hyb_s2t
736012bc364SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
737c4762a1bSJed Brown 
738c4762a1bSJed Brown   # Test P4EST
739c4762a1bSJed Brown   testset:
740c4762a1bSJed Brown     requires: p4est
74130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1
742c4762a1bSJed Brown     test:
743c4762a1bSJed Brown       suffix: p4est_periodic
74430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
745c4762a1bSJed Brown     test:
746c4762a1bSJed Brown       suffix: p4est_periodic_3d
74730602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
748c4762a1bSJed Brown     test:
749c4762a1bSJed Brown       suffix: p4est_gmsh_periodic
75030602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
751c4762a1bSJed Brown     test:
752c4762a1bSJed Brown       suffix: p4est_gmsh_surface
75330602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
754c4762a1bSJed Brown     test:
755c4762a1bSJed Brown       suffix: p4est_gmsh_surface_parallel
756c4762a1bSJed Brown       nsize: 2
75730602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance
758c4762a1bSJed Brown     test:
759c4762a1bSJed Brown       suffix: p4est_hyb_2d
76030602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
761c4762a1bSJed Brown     test:
762c4762a1bSJed Brown       suffix: p4est_hyb_3d
76330602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
764c4762a1bSJed Brown     test:
765c4762a1bSJed Brown       requires: ctetgen
766c4762a1bSJed Brown       suffix: p4est_s2t_bugfaces_3d
76730602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1
768c4762a1bSJed Brown     test:
769c4762a1bSJed Brown       suffix: p4est_bug_overlapsf
770c4762a1bSJed Brown       nsize: 3
77130602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple
772c4762a1bSJed Brown     test:
773c4762a1bSJed Brown       suffix: p4est_redistribute
774c4762a1bSJed Brown       nsize: 3
77530602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_view ::load_balance
776c4762a1bSJed Brown     test:
777c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d
77830602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
779c4762a1bSJed Brown     test:
780c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d_hash
78130602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
782c4762a1bSJed Brown     test:
783c4762a1bSJed Brown       requires: long_runtime
784c4762a1bSJed Brown       suffix: p4est_gmsh_periodic_3d
78530602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
786c4762a1bSJed Brown 
787c4762a1bSJed Brown   testset:
788c4762a1bSJed Brown     requires: p4est
789c4762a1bSJed Brown     nsize: 6
79030602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute
791c4762a1bSJed Brown     test:
79254fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
793c4762a1bSJed Brown       suffix: p4est_par_periodic
79430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
795c4762a1bSJed Brown     test:
79654fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
797c4762a1bSJed Brown       suffix: p4est_par_periodic_3d
79830602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
799c4762a1bSJed Brown     test:
80054fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
801c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic
80230602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
803c4762a1bSJed Brown     test:
804c4762a1bSJed Brown       suffix: p4est_par_gmsh_surface
80530602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
806c4762a1bSJed Brown     test:
807c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d
80830602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
809c4762a1bSJed Brown     test:
81054fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
811c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d_hash
81230602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
813c4762a1bSJed Brown     test:
814c4762a1bSJed Brown       requires: long_runtime
815c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic_3d
81630602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
817c4762a1bSJed Brown 
818c4762a1bSJed Brown   testset:
819c4762a1bSJed Brown     requires: p4est
820c4762a1bSJed Brown     nsize: 6
82130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple
822c4762a1bSJed Brown     test:
823c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic
82430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
825c4762a1bSJed Brown     #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled)
826c4762a1bSJed Brown     test:
827c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic_3d
82830602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0
829c4762a1bSJed Brown     test:
830c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic
83130602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
832c4762a1bSJed Brown     test:
833c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_surface
83430602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
835c4762a1bSJed Brown     test:
836c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d
83730602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
838c4762a1bSJed Brown     test:
839c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d_hash
84030602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
841c4762a1bSJed Brown     test:
842c4762a1bSJed Brown       requires: long_runtime
843c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic_3d
84430602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
845c4762a1bSJed Brown     test:
846c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_2d
84730602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
848c4762a1bSJed Brown     test:
849c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_3d
85030602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
851c4762a1bSJed Brown 
852c4762a1bSJed Brown   test:
853c4762a1bSJed Brown     TODO: broken
854c4762a1bSJed Brown     requires: p4est
855c4762a1bSJed Brown     nsize: 2
856c4762a1bSJed Brown     suffix: p4est_bug_labels_noovl
85730602db0SMatthew G. Knepley     args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error
858c4762a1bSJed Brown 
859c4762a1bSJed Brown   test:
860c4762a1bSJed Brown     requires: p4est
861c4762a1bSJed Brown     nsize: 2
862c4762a1bSJed Brown     suffix: p4est_bug_distribute_overlap
86330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance
864c4762a1bSJed Brown     args: -dm_post_overlap_view
865c4762a1bSJed Brown 
866c4762a1bSJed Brown   test:
867595782ffSMatthew G. Knepley     suffix: ref_alfeld2d_0
868595782ffSMatthew G. Knepley     requires: triangle
869012bc364SMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
870595782ffSMatthew G. Knepley   test:
871595782ffSMatthew G. Knepley     suffix: ref_alfeld3d_0
872595782ffSMatthew G. Knepley     requires: ctetgen
873012bc364SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
874595782ffSMatthew G. Knepley 
87509c713e7SStefano Zampini   # Boundary layer refiners
87609c713e7SStefano Zampini   test:
87709c713e7SStefano Zampini     suffix: ref_bl_1
878*d410b0cfSMatthew G. Knepley     args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3
87909c713e7SStefano Zampini   test:
88009c713e7SStefano Zampini     suffix: ref_bl_2_tri
88109c713e7SStefano Zampini     requires: triangle
882*d410b0cfSMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
88309c713e7SStefano Zampini   test:
88409c713e7SStefano Zampini     suffix: ref_bl_3_quad
885*d410b0cfSMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
88609c713e7SStefano Zampini   test:
88709c713e7SStefano Zampini     suffix: ref_bl_spheresurface_extruded
88809c713e7SStefano Zampini     nsize : 4
889*d410b0cfSMatthew G. Knepley     args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2
89009c713e7SStefano Zampini   test:
89109c713e7SStefano Zampini     suffix: ref_bl_3d_hyb
89209c713e7SStefano Zampini     nsize : 4
893012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1
8940e278f6aSMatthew G. Knepley 
89530602db0SMatthew G. Knepley   testset:
89630602db0SMatthew G. Knepley     args: -dm_plex_shape sphere -dm_plex_check_all -dm_view
8970e278f6aSMatthew G. Knepley     test:
8980e278f6aSMatthew G. Knepley       suffix: sphere_0
89930602db0SMatthew G. Knepley       args:
9000e278f6aSMatthew G. Knepley     test:
9010e278f6aSMatthew G. Knepley       suffix: sphere_1
90230602db0SMatthew G. Knepley       args: -ref_dm_refine 2
9030e278f6aSMatthew G. Knepley     test:
90468317524SMatthew G. Knepley       suffix: sphere_2
90530602db0SMatthew G. Knepley       args: -dm_plex_simplex 0
90668317524SMatthew G. Knepley     test:
90768317524SMatthew G. Knepley       suffix: sphere_3
90830602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -ref_dm_refine 2
90968317524SMatthew G. Knepley 
91068317524SMatthew G. Knepley   test:
9110e278f6aSMatthew G. Knepley     suffix: ball_0
9120e278f6aSMatthew G. Knepley     requires: ctetgen
91330602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view
9140e278f6aSMatthew G. Knepley 
9150e278f6aSMatthew G. Knepley   test:
9160e278f6aSMatthew G. Knepley     suffix: ball_1
9170e278f6aSMatthew G. Knepley     requires: ctetgen
91830602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view
9190e278f6aSMatthew G. Knepley 
920c4762a1bSJed Brown TEST*/
921