1c4762a1bSJed Brown static char help[] = "Check that a DM can accurately represent and interpolate functions of a given polynomial order\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdmplex.h> 4c4762a1bSJed Brown #include <petscdm.h> 5c4762a1bSJed Brown #include <petscdmda.h> 6c4762a1bSJed Brown #include <petscfe.h> 7c4762a1bSJed Brown #include <petscds.h> 8c4762a1bSJed Brown #include <petscksp.h> 9c4762a1bSJed Brown #include <petscsnes.h> 10c4762a1bSJed Brown 11c4762a1bSJed Brown typedef struct { 12c4762a1bSJed Brown /* Domain and mesh definition */ 13c4762a1bSJed Brown PetscBool useDA; /* Flag DMDA tensor product mesh */ 14c4762a1bSJed Brown PetscBool shearCoords; /* Flag for shear transform */ 15c4762a1bSJed Brown PetscBool nonaffineCoords; /* Flag for non-affine transform */ 16c4762a1bSJed Brown /* Element definition */ 17c4762a1bSJed Brown PetscInt qorder; /* Order of the quadrature */ 18c4762a1bSJed Brown PetscInt numComponents; /* Number of field components */ 19c4762a1bSJed Brown PetscFE fe; /* The finite element */ 20c4762a1bSJed Brown /* Testing space */ 21c4762a1bSJed Brown PetscInt porder; /* Order of polynomials to test */ 22c4762a1bSJed Brown PetscBool convergence; /* Test for order of convergence */ 23c4762a1bSJed Brown PetscBool convRefine; /* Test for convergence using refinement, otherwise use coarsening */ 24c4762a1bSJed Brown PetscBool constraints; /* Test local constraints */ 25c4762a1bSJed Brown PetscBool tree; /* Test tree routines */ 26c4762a1bSJed Brown PetscBool testFEjacobian; /* Test finite element Jacobian assembly */ 27c4762a1bSJed Brown PetscBool testFVgrad; /* Test finite difference gradient routine */ 28c4762a1bSJed Brown PetscBool testInjector; /* Test finite element injection routines */ 29c4762a1bSJed Brown PetscInt treeCell; /* Cell to refine in tree test */ 30c4762a1bSJed Brown PetscReal constants[3]; /* Constant values for each dimension */ 31c4762a1bSJed Brown } AppCtx; 32c4762a1bSJed Brown 33c4762a1bSJed Brown /* u = 1 */ 34c4762a1bSJed Brown PetscErrorCode constant(PetscInt dim, PetscReal time, const PetscReal coords[], PetscInt Nf, PetscScalar *u, void *ctx) 35c4762a1bSJed Brown { 36c4762a1bSJed Brown AppCtx *user = (AppCtx *) ctx; 37c4762a1bSJed Brown PetscInt d; 3830602db0SMatthew G. Knepley for (d = 0; d < dim; ++d) u[d] = user->constants[d]; 39c4762a1bSJed Brown return 0; 40c4762a1bSJed Brown } 41c4762a1bSJed Brown PetscErrorCode constantDer(PetscInt dim, PetscReal time, const PetscReal coords[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) 42c4762a1bSJed Brown { 43c4762a1bSJed Brown PetscInt d; 4430602db0SMatthew G. Knepley for (d = 0; d < dim; ++d) u[d] = 0.0; 45c4762a1bSJed Brown return 0; 46c4762a1bSJed Brown } 47c4762a1bSJed Brown 48c4762a1bSJed Brown /* u = x */ 49c4762a1bSJed Brown PetscErrorCode linear(PetscInt dim, PetscReal time, const PetscReal coords[], PetscInt Nf, PetscScalar *u, void *ctx) 50c4762a1bSJed Brown { 51c4762a1bSJed Brown PetscInt d; 52c4762a1bSJed Brown for (d = 0; d < dim; ++d) u[d] = coords[d]; 53c4762a1bSJed Brown return 0; 54c4762a1bSJed Brown } 55c4762a1bSJed Brown PetscErrorCode linearDer(PetscInt dim, PetscReal time, const PetscReal coords[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) 56c4762a1bSJed Brown { 57c4762a1bSJed Brown PetscInt d, e; 58c4762a1bSJed Brown for (d = 0; d < dim; ++d) { 59c4762a1bSJed Brown u[d] = 0.0; 60c4762a1bSJed Brown for (e = 0; e < dim; ++e) u[d] += (d == e ? 1.0 : 0.0) * n[e]; 61c4762a1bSJed Brown } 62c4762a1bSJed Brown return 0; 63c4762a1bSJed Brown } 64c4762a1bSJed Brown 65c4762a1bSJed Brown /* u = x^2 or u = (x^2, xy) or u = (xy, yz, zx) */ 66c4762a1bSJed Brown PetscErrorCode quadratic(PetscInt dim, PetscReal time, const PetscReal coords[], PetscInt Nf, PetscScalar *u, void *ctx) 67c4762a1bSJed Brown { 6830602db0SMatthew G. Knepley if (dim > 2) {u[0] = coords[0]*coords[1]; u[1] = coords[1]*coords[2]; u[2] = coords[2]*coords[0];} 6930602db0SMatthew G. Knepley else if (dim > 1) {u[0] = coords[0]*coords[0]; u[1] = coords[0]*coords[1];} 7030602db0SMatthew G. Knepley else if (dim > 0) {u[0] = coords[0]*coords[0];} 71c4762a1bSJed Brown return 0; 72c4762a1bSJed Brown } 73c4762a1bSJed Brown PetscErrorCode quadraticDer(PetscInt dim, PetscReal time, const PetscReal coords[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) 74c4762a1bSJed Brown { 7530602db0SMatthew G. Knepley if (dim > 2) {u[0] = coords[1]*n[0] + coords[0]*n[1]; u[1] = coords[2]*n[1] + coords[1]*n[2]; u[2] = coords[2]*n[0] + coords[0]*n[2];} 7630602db0SMatthew G. Knepley else if (dim > 1) {u[0] = 2.0*coords[0]*n[0]; u[1] = coords[1]*n[0] + coords[0]*n[1];} 7730602db0SMatthew G. Knepley else if (dim > 0) {u[0] = 2.0*coords[0]*n[0];} 78c4762a1bSJed Brown return 0; 79c4762a1bSJed Brown } 80c4762a1bSJed Brown 81c4762a1bSJed Brown /* u = x^3 or u = (x^3, x^2y) or u = (x^2y, y^2z, z^2x) */ 82c4762a1bSJed Brown PetscErrorCode cubic(PetscInt dim, PetscReal time, const PetscReal coords[], PetscInt Nf, PetscScalar *u, void *ctx) 83c4762a1bSJed Brown { 8430602db0SMatthew G. Knepley if (dim > 2) {u[0] = coords[0]*coords[0]*coords[1]; u[1] = coords[1]*coords[1]*coords[2]; u[2] = coords[2]*coords[2]*coords[0];} 8530602db0SMatthew G. Knepley else if (dim > 1) {u[0] = coords[0]*coords[0]*coords[0]; u[1] = coords[0]*coords[0]*coords[1];} 8630602db0SMatthew G. Knepley else if (dim > 0) {u[0] = coords[0]*coords[0]*coords[0];} 87c4762a1bSJed Brown return 0; 88c4762a1bSJed Brown } 89c4762a1bSJed Brown PetscErrorCode cubicDer(PetscInt dim, PetscReal time, const PetscReal coords[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) 90c4762a1bSJed Brown { 9130602db0SMatthew G. Knepley if (dim > 2) {u[0] = 2.0*coords[0]*coords[1]*n[0] + coords[0]*coords[0]*n[1]; u[1] = 2.0*coords[1]*coords[2]*n[1] + coords[1]*coords[1]*n[2]; u[2] = 2.0*coords[2]*coords[0]*n[2] + coords[2]*coords[2]*n[0];} 9230602db0SMatthew G. Knepley else if (dim > 1) {u[0] = 3.0*coords[0]*coords[0]*n[0]; u[1] = 2.0*coords[0]*coords[1]*n[0] + coords[0]*coords[0]*n[1];} 9330602db0SMatthew G. Knepley else if (dim > 0) {u[0] = 3.0*coords[0]*coords[0]*n[0];} 94c4762a1bSJed Brown return 0; 95c4762a1bSJed Brown } 96c4762a1bSJed Brown 97c4762a1bSJed Brown /* u = tanh(x) */ 98c4762a1bSJed Brown PetscErrorCode trig(PetscInt dim, PetscReal time, const PetscReal coords[], PetscInt Nf, PetscScalar *u, void *ctx) 99c4762a1bSJed Brown { 100c4762a1bSJed Brown PetscInt d; 10130602db0SMatthew G. Knepley for (d = 0; d < dim; ++d) u[d] = PetscTanhReal(coords[d] - 0.5); 102c4762a1bSJed Brown return 0; 103c4762a1bSJed Brown } 104c4762a1bSJed Brown PetscErrorCode trigDer(PetscInt dim, PetscReal time, const PetscReal coords[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) 105c4762a1bSJed Brown { 106c4762a1bSJed Brown PetscInt d; 10730602db0SMatthew G. Knepley for (d = 0; d < dim; ++d) u[d] = 1.0/PetscSqr(PetscCoshReal(coords[d] - 0.5)) * n[d]; 108c4762a1bSJed Brown return 0; 109c4762a1bSJed Brown } 110c4762a1bSJed Brown 111c4762a1bSJed Brown static PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 112c4762a1bSJed Brown { 113c4762a1bSJed Brown PetscInt n = 3; 114c4762a1bSJed Brown PetscErrorCode ierr; 115c4762a1bSJed Brown 116c4762a1bSJed Brown PetscFunctionBeginUser; 11730602db0SMatthew G. Knepley options->useDA = PETSC_FALSE; 118c4762a1bSJed Brown options->shearCoords = PETSC_FALSE; 119c4762a1bSJed Brown options->nonaffineCoords = PETSC_FALSE; 120c4762a1bSJed Brown options->qorder = 0; 121c4762a1bSJed Brown options->numComponents = PETSC_DEFAULT; 122c4762a1bSJed Brown options->porder = 0; 123c4762a1bSJed Brown options->convergence = PETSC_FALSE; 124c4762a1bSJed Brown options->convRefine = PETSC_TRUE; 125c4762a1bSJed Brown options->constraints = PETSC_FALSE; 126c4762a1bSJed Brown options->tree = PETSC_FALSE; 127c4762a1bSJed Brown options->treeCell = 0; 128c4762a1bSJed Brown options->testFEjacobian = PETSC_FALSE; 129c4762a1bSJed Brown options->testFVgrad = PETSC_FALSE; 130c4762a1bSJed Brown options->testInjector = PETSC_FALSE; 131c4762a1bSJed Brown options->constants[0] = 1.0; 132c4762a1bSJed Brown options->constants[1] = 2.0; 133c4762a1bSJed Brown options->constants[2] = 3.0; 134c4762a1bSJed Brown 135c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Projection Test Options", "DMPlex");CHKERRQ(ierr); 136c4762a1bSJed Brown ierr = PetscOptionsBool("-use_da", "Flag for DMDA mesh", "ex3.c", options->useDA, &options->useDA, NULL);CHKERRQ(ierr); 137c4762a1bSJed Brown ierr = PetscOptionsBool("-shear_coords", "Transform coordinates with a shear", "ex3.c", options->shearCoords, &options->shearCoords, NULL);CHKERRQ(ierr); 138c4762a1bSJed Brown ierr = PetscOptionsBool("-non_affine_coords", "Transform coordinates with a non-affine transform", "ex3.c", options->nonaffineCoords, &options->nonaffineCoords, NULL);CHKERRQ(ierr); 139c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-qorder", "The quadrature order", "ex3.c", options->qorder, &options->qorder, NULL,0);CHKERRQ(ierr); 140c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-num_comp", "The number of field components", "ex3.c", options->numComponents, &options->numComponents, NULL,PETSC_DEFAULT);CHKERRQ(ierr); 141c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-porder", "The order of polynomials to test", "ex3.c", options->porder, &options->porder, NULL,0);CHKERRQ(ierr); 142c4762a1bSJed Brown ierr = PetscOptionsBool("-convergence", "Check the convergence rate", "ex3.c", options->convergence, &options->convergence, NULL);CHKERRQ(ierr); 143c4762a1bSJed Brown ierr = PetscOptionsBool("-conv_refine", "Use refinement for the convergence rate", "ex3.c", options->convRefine, &options->convRefine, NULL);CHKERRQ(ierr); 144c4762a1bSJed Brown ierr = PetscOptionsBool("-constraints", "Test local constraints (serial only)", "ex3.c", options->constraints, &options->constraints, NULL);CHKERRQ(ierr); 145c4762a1bSJed Brown ierr = PetscOptionsBool("-tree", "Test tree routines", "ex3.c", options->tree, &options->tree, NULL);CHKERRQ(ierr); 146c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-tree_cell", "cell to refine in tree test", "ex3.c", options->treeCell, &options->treeCell, NULL,0);CHKERRQ(ierr); 147c4762a1bSJed Brown ierr = PetscOptionsBool("-test_fe_jacobian", "Test finite element Jacobian assembly", "ex3.c", options->testFEjacobian, &options->testFEjacobian, NULL);CHKERRQ(ierr); 148c4762a1bSJed Brown ierr = PetscOptionsBool("-test_fv_grad", "Test finite volume gradient reconstruction", "ex3.c", options->testFVgrad, &options->testFVgrad, NULL);CHKERRQ(ierr); 149c4762a1bSJed Brown ierr = PetscOptionsBool("-test_injector","Test finite element injection", "ex3.c", options->testInjector, &options->testInjector,NULL);CHKERRQ(ierr); 150c4762a1bSJed Brown ierr = PetscOptionsRealArray("-constants","Set the constant values", "ex3.c", options->constants, &n,NULL);CHKERRQ(ierr); 151c4762a1bSJed Brown ierr = PetscOptionsEnd();CHKERRQ(ierr); 152c4762a1bSJed Brown 153c4762a1bSJed Brown PetscFunctionReturn(0); 154c4762a1bSJed Brown } 155c4762a1bSJed Brown 156c4762a1bSJed Brown static PetscErrorCode TransformCoordinates(DM dm, AppCtx *user) 157c4762a1bSJed Brown { 158c4762a1bSJed Brown PetscSection coordSection; 159c4762a1bSJed Brown Vec coordinates; 160c4762a1bSJed Brown PetscScalar *coords; 161c4762a1bSJed Brown PetscInt vStart, vEnd, v; 162c4762a1bSJed Brown PetscErrorCode ierr; 163c4762a1bSJed Brown 164c4762a1bSJed Brown PetscFunctionBeginUser; 165c4762a1bSJed Brown if (user->nonaffineCoords) { 166c4762a1bSJed Brown /* x' = r^(1/p) (x/r), y' = r^(1/p) (y/r), z' = z */ 167c4762a1bSJed Brown ierr = DMGetCoordinateSection(dm, &coordSection);CHKERRQ(ierr); 168c4762a1bSJed Brown ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr); 169c4762a1bSJed Brown ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr); 170c4762a1bSJed Brown ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr); 171c4762a1bSJed Brown for (v = vStart; v < vEnd; ++v) { 172c4762a1bSJed Brown PetscInt dof, off; 173c4762a1bSJed Brown PetscReal p = 4.0, r; 174c4762a1bSJed Brown 175c4762a1bSJed Brown ierr = PetscSectionGetDof(coordSection, v, &dof);CHKERRQ(ierr); 176c4762a1bSJed Brown ierr = PetscSectionGetOffset(coordSection, v, &off);CHKERRQ(ierr); 177c4762a1bSJed Brown switch (dof) { 178c4762a1bSJed Brown case 2: 179c4762a1bSJed Brown r = PetscSqr(PetscRealPart(coords[off+0])) + PetscSqr(PetscRealPart(coords[off+1])); 180c4762a1bSJed Brown coords[off+0] = r == 0.0 ? 0.0 : PetscPowReal(r, (1 - p)/(2*p))*coords[off+0]; 181c4762a1bSJed Brown coords[off+1] = r == 0.0 ? 0.0 : PetscPowReal(r, (1 - p)/(2*p))*coords[off+1]; 182c4762a1bSJed Brown break; 183c4762a1bSJed Brown case 3: 184c4762a1bSJed Brown r = PetscSqr(PetscRealPart(coords[off+0])) + PetscSqr(PetscRealPart(coords[off+1])); 185c4762a1bSJed Brown coords[off+0] = r == 0.0 ? 0.0 : PetscPowReal(r, (1 - p)/(2*p))*coords[off+0]; 186c4762a1bSJed Brown coords[off+1] = r == 0.0 ? 0.0 : PetscPowReal(r, (1 - p)/(2*p))*coords[off+1]; 187c4762a1bSJed Brown coords[off+2] = coords[off+2]; 188c4762a1bSJed Brown break; 189c4762a1bSJed Brown } 190c4762a1bSJed Brown } 191c4762a1bSJed Brown ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr); 192c4762a1bSJed Brown } 193c4762a1bSJed Brown if (user->shearCoords) { 194c4762a1bSJed Brown /* x' = x + m y + m z, y' = y + m z, z' = z */ 195c4762a1bSJed Brown ierr = DMGetCoordinateSection(dm, &coordSection);CHKERRQ(ierr); 196c4762a1bSJed Brown ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr); 197c4762a1bSJed Brown ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr); 198c4762a1bSJed Brown ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr); 199c4762a1bSJed Brown for (v = vStart; v < vEnd; ++v) { 200c4762a1bSJed Brown PetscInt dof, off; 201c4762a1bSJed Brown PetscReal m = 1.0; 202c4762a1bSJed Brown 203c4762a1bSJed Brown ierr = PetscSectionGetDof(coordSection, v, &dof);CHKERRQ(ierr); 204c4762a1bSJed Brown ierr = PetscSectionGetOffset(coordSection, v, &off);CHKERRQ(ierr); 205c4762a1bSJed Brown switch (dof) { 206c4762a1bSJed Brown case 2: 207c4762a1bSJed Brown coords[off+0] = coords[off+0] + m*coords[off+1]; 208c4762a1bSJed Brown coords[off+1] = coords[off+1]; 209c4762a1bSJed Brown break; 210c4762a1bSJed Brown case 3: 211c4762a1bSJed Brown coords[off+0] = coords[off+0] + m*coords[off+1] + m*coords[off+2]; 212c4762a1bSJed Brown coords[off+1] = coords[off+1] + m*coords[off+2]; 213c4762a1bSJed Brown coords[off+2] = coords[off+2]; 214c4762a1bSJed Brown break; 215c4762a1bSJed Brown } 216c4762a1bSJed Brown } 217c4762a1bSJed Brown ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr); 218c4762a1bSJed Brown } 219c4762a1bSJed Brown PetscFunctionReturn(0); 220c4762a1bSJed Brown } 221c4762a1bSJed Brown 222c4762a1bSJed Brown static PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 223c4762a1bSJed Brown { 22430602db0SMatthew G. Knepley PetscInt dim = 2; 22530602db0SMatthew G. Knepley PetscBool simplex; 226c4762a1bSJed Brown PetscErrorCode ierr; 227c4762a1bSJed Brown 228c4762a1bSJed Brown PetscFunctionBeginUser; 22930602db0SMatthew G. Knepley if (user->useDA) { 23030602db0SMatthew G. Knepley switch (dim) { 231c4762a1bSJed Brown case 2: 232c4762a1bSJed Brown ierr = DMDACreate2d(comm, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, DMDA_STENCIL_BOX, 2, 2, PETSC_DETERMINE, PETSC_DETERMINE, 1, 1, NULL, NULL, dm);CHKERRQ(ierr); 233c4762a1bSJed Brown ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 234c4762a1bSJed Brown ierr = DMSetUp(*dm);CHKERRQ(ierr); 235c4762a1bSJed Brown ierr = DMDASetVertexCoordinates(*dm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0);CHKERRQ(ierr); 236c4762a1bSJed Brown break; 237c4762a1bSJed Brown default: 23898921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Cannot create structured mesh of dimension %d", dim); 239c4762a1bSJed Brown } 240c4762a1bSJed Brown ierr = PetscObjectSetName((PetscObject) *dm, "Hexahedral Mesh");CHKERRQ(ierr); 24130602db0SMatthew G. Knepley } else { 24230602db0SMatthew G. Knepley ierr = DMCreate(comm, dm);CHKERRQ(ierr); 24330602db0SMatthew G. Knepley ierr = DMSetType(*dm, DMPLEX);CHKERRQ(ierr); 24430602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 245c4762a1bSJed Brown 24630602db0SMatthew G. Knepley ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr); 24730602db0SMatthew G. Knepley ierr = DMPlexIsSimplex(*dm, &simplex);CHKERRQ(ierr); 24830602db0SMatthew G. Knepley ierr = MPI_Bcast(&simplex, 1, MPIU_BOOL, 0, comm);CHKERRMPI(ierr); 249c4762a1bSJed Brown if (user->tree) { 25030602db0SMatthew G. Knepley DM refTree, ncdm = NULL; 251c4762a1bSJed Brown 25230602db0SMatthew G. Knepley ierr = DMPlexCreateDefaultReferenceTree(comm,dim,simplex,&refTree);CHKERRQ(ierr); 253012bc364SMatthew G. Knepley ierr = DMViewFromOptions(refTree,NULL,"-reftree_dm_view");CHKERRQ(ierr); 254c4762a1bSJed Brown ierr = DMPlexSetReferenceTree(*dm,refTree);CHKERRQ(ierr); 255c4762a1bSJed Brown ierr = DMDestroy(&refTree);CHKERRQ(ierr); 256c4762a1bSJed Brown ierr = DMPlexTreeRefineCell(*dm,user->treeCell,&ncdm);CHKERRQ(ierr); 257c4762a1bSJed Brown if (ncdm) { 258c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 259c4762a1bSJed Brown *dm = ncdm; 260c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_FALSE);CHKERRQ(ierr); 261c4762a1bSJed Brown } 262012bc364SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "tree_");CHKERRQ(ierr); 263012bc364SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 264012bc364SMatthew G. Knepley ierr = DMViewFromOptions(*dm,NULL,"-dm_view");CHKERRQ(ierr); 265c4762a1bSJed Brown } else { 266c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 267c4762a1bSJed Brown } 26830602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_");CHKERRQ(ierr); 26930602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 27030602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 27130602db0SMatthew G. Knepley if (simplex) {ierr = PetscObjectSetName((PetscObject) *dm, "Simplicial Mesh");CHKERRQ(ierr);} 27230602db0SMatthew G. Knepley else {ierr = PetscObjectSetName((PetscObject) *dm, "Hexahedral Mesh");CHKERRQ(ierr);} 273c4762a1bSJed Brown } 274c4762a1bSJed Brown ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 275c4762a1bSJed Brown ierr = TransformCoordinates(*dm, user);CHKERRQ(ierr); 276c4762a1bSJed Brown ierr = DMViewFromOptions(*dm,NULL,"-dm_view");CHKERRQ(ierr); 277c4762a1bSJed Brown PetscFunctionReturn(0); 278c4762a1bSJed Brown } 279c4762a1bSJed Brown 280c4762a1bSJed Brown static void simple_mass(PetscInt dim, PetscInt Nf, PetscInt NfAux, 281c4762a1bSJed Brown const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], 282c4762a1bSJed Brown const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], 283c4762a1bSJed Brown PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[]) 284c4762a1bSJed Brown { 285c4762a1bSJed Brown PetscInt d, e; 286c4762a1bSJed Brown for (d = 0, e = 0; d < dim; d++, e+=dim+1) { 287c4762a1bSJed Brown g0[e] = 1.; 288c4762a1bSJed Brown } 289c4762a1bSJed Brown } 290c4762a1bSJed Brown 291c4762a1bSJed Brown /* < \nabla v, 1/2(\nabla u + {\nabla u}^T) > */ 292c4762a1bSJed Brown static void symmetric_gradient_inner_product(PetscInt dim, PetscInt Nf, PetscInt NfAux, 293c4762a1bSJed Brown const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], 294c4762a1bSJed Brown const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], 295c4762a1bSJed Brown PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar C[]) 296c4762a1bSJed Brown { 297c4762a1bSJed Brown PetscInt compI, compJ, d, e; 298c4762a1bSJed Brown 299c4762a1bSJed Brown for (compI = 0; compI < dim; ++compI) { 300c4762a1bSJed Brown for (compJ = 0; compJ < dim; ++compJ) { 301c4762a1bSJed Brown for (d = 0; d < dim; ++d) { 302c4762a1bSJed Brown for (e = 0; e < dim; e++) { 303c4762a1bSJed Brown if (d == e && d == compI && d == compJ) { 304c4762a1bSJed Brown C[((compI*dim+compJ)*dim+d)*dim+e] = 1.0; 305c4762a1bSJed Brown } else if ((d == compJ && e == compI) || (d == e && compI == compJ)) { 306c4762a1bSJed Brown C[((compI*dim+compJ)*dim+d)*dim+e] = 0.5; 307c4762a1bSJed Brown } else { 308c4762a1bSJed Brown C[((compI*dim+compJ)*dim+d)*dim+e] = 0.0; 309c4762a1bSJed Brown } 310c4762a1bSJed Brown } 311c4762a1bSJed Brown } 312c4762a1bSJed Brown } 313c4762a1bSJed Brown } 314c4762a1bSJed Brown } 315c4762a1bSJed Brown 316c4762a1bSJed Brown static PetscErrorCode SetupSection(DM dm, AppCtx *user) 317c4762a1bSJed Brown { 318c4762a1bSJed Brown PetscErrorCode ierr; 319c4762a1bSJed Brown 320c4762a1bSJed Brown PetscFunctionBeginUser; 32130602db0SMatthew G. Knepley if (user->constraints) { 322c4762a1bSJed Brown /* test local constraints */ 323c4762a1bSJed Brown DM coordDM; 324c4762a1bSJed Brown PetscInt fStart, fEnd, f, vStart, vEnd, v; 325c4762a1bSJed Brown PetscInt edgesx = 2, vertsx; 326c4762a1bSJed Brown PetscInt edgesy = 2, vertsy; 327c4762a1bSJed Brown PetscMPIInt size; 328c4762a1bSJed Brown PetscInt numConst; 329c4762a1bSJed Brown PetscSection aSec; 330c4762a1bSJed Brown PetscInt *anchors; 331c4762a1bSJed Brown PetscInt offset; 332c4762a1bSJed Brown IS aIS; 333c4762a1bSJed Brown MPI_Comm comm = PetscObjectComm((PetscObject)dm); 334c4762a1bSJed Brown 335ffc4695bSBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr); 336*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(size > 1,comm,PETSC_ERR_SUP,"Local constraint test can only be performed in serial"); 337c4762a1bSJed Brown 338c4762a1bSJed Brown /* we are going to test constraints by using them to enforce periodicity 339c4762a1bSJed Brown * in one direction, and comparing to the existing method of enforcing 340c4762a1bSJed Brown * periodicity */ 341c4762a1bSJed Brown 342c4762a1bSJed Brown /* first create the coordinate section so that it does not clone the 343c4762a1bSJed Brown * constraints */ 344c4762a1bSJed Brown ierr = DMGetCoordinateDM(dm,&coordDM);CHKERRQ(ierr); 345c4762a1bSJed Brown 346c4762a1bSJed Brown /* create the constrained-to-anchor section */ 347c4762a1bSJed Brown ierr = DMPlexGetDepthStratum(dm,0,&vStart,&vEnd);CHKERRQ(ierr); 348c4762a1bSJed Brown ierr = DMPlexGetDepthStratum(dm,1,&fStart,&fEnd);CHKERRQ(ierr); 349c4762a1bSJed Brown ierr = PetscSectionCreate(PETSC_COMM_SELF,&aSec);CHKERRQ(ierr); 350c4762a1bSJed Brown ierr = PetscSectionSetChart(aSec,PetscMin(fStart,vStart),PetscMax(fEnd,vEnd));CHKERRQ(ierr); 351c4762a1bSJed Brown 352c4762a1bSJed Brown /* define the constraints */ 353c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-da_grid_x",&edgesx,NULL);CHKERRQ(ierr); 354c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-da_grid_y",&edgesy,NULL);CHKERRQ(ierr); 355c4762a1bSJed Brown vertsx = edgesx + 1; 356c4762a1bSJed Brown vertsy = edgesy + 1; 357c4762a1bSJed Brown numConst = vertsy + edgesy; 358c4762a1bSJed Brown ierr = PetscMalloc1(numConst,&anchors);CHKERRQ(ierr); 359c4762a1bSJed Brown offset = 0; 360c4762a1bSJed Brown for (v = vStart + edgesx; v < vEnd; v+= vertsx) { 361c4762a1bSJed Brown ierr = PetscSectionSetDof(aSec,v,1);CHKERRQ(ierr); 362c4762a1bSJed Brown anchors[offset++] = v - edgesx; 363c4762a1bSJed Brown } 364c4762a1bSJed Brown for (f = fStart + edgesx * vertsy + edgesx * edgesy; f < fEnd; f++) { 365c4762a1bSJed Brown ierr = PetscSectionSetDof(aSec,f,1);CHKERRQ(ierr); 366c4762a1bSJed Brown anchors[offset++] = f - edgesx * edgesy; 367c4762a1bSJed Brown } 368c4762a1bSJed Brown ierr = PetscSectionSetUp(aSec);CHKERRQ(ierr); 369c4762a1bSJed Brown ierr = ISCreateGeneral(PETSC_COMM_SELF,numConst,anchors,PETSC_OWN_POINTER,&aIS);CHKERRQ(ierr); 370c4762a1bSJed Brown 371c4762a1bSJed Brown ierr = DMPlexSetAnchors(dm,aSec,aIS);CHKERRQ(ierr); 372c4762a1bSJed Brown ierr = PetscSectionDestroy(&aSec);CHKERRQ(ierr); 373c4762a1bSJed Brown ierr = ISDestroy(&aIS);CHKERRQ(ierr); 374c4762a1bSJed Brown } 375c4762a1bSJed Brown ierr = DMSetNumFields(dm, 1);CHKERRQ(ierr); 376c4762a1bSJed Brown ierr = DMSetField(dm, 0, NULL, (PetscObject) user->fe);CHKERRQ(ierr); 377c4762a1bSJed Brown ierr = DMCreateDS(dm);CHKERRQ(ierr); 37830602db0SMatthew G. Knepley if (user->constraints) { 379c4762a1bSJed Brown /* test getting local constraint matrix that matches section */ 380c4762a1bSJed Brown PetscSection aSec; 381c4762a1bSJed Brown IS aIS; 382c4762a1bSJed Brown 383c4762a1bSJed Brown ierr = DMPlexGetAnchors(dm,&aSec,&aIS);CHKERRQ(ierr); 384c4762a1bSJed Brown if (aSec) { 385c4762a1bSJed Brown PetscDS ds; 386c4762a1bSJed Brown PetscSection cSec, section; 387c4762a1bSJed Brown PetscInt cStart, cEnd, c, numComp; 388c4762a1bSJed Brown Mat cMat, mass; 389c4762a1bSJed Brown Vec local; 390c4762a1bSJed Brown const PetscInt *anchors; 391c4762a1bSJed Brown 392c4762a1bSJed Brown ierr = DMGetLocalSection(dm,§ion);CHKERRQ(ierr); 393c4762a1bSJed Brown /* this creates the matrix and preallocates the matrix structure: we 394c4762a1bSJed Brown * just have to fill in the values */ 395c4762a1bSJed Brown ierr = DMGetDefaultConstraints(dm,&cSec,&cMat);CHKERRQ(ierr); 396c4762a1bSJed Brown ierr = PetscSectionGetChart(cSec,&cStart,&cEnd);CHKERRQ(ierr); 397c4762a1bSJed Brown ierr = ISGetIndices(aIS,&anchors);CHKERRQ(ierr); 398c4762a1bSJed Brown ierr = PetscFEGetNumComponents(user->fe, &numComp);CHKERRQ(ierr); 399c4762a1bSJed Brown for (c = cStart; c < cEnd; c++) { 400c4762a1bSJed Brown PetscInt cDof; 401c4762a1bSJed Brown 402c4762a1bSJed Brown /* is this point constrained? (does it have an anchor?) */ 403c4762a1bSJed Brown ierr = PetscSectionGetDof(aSec,c,&cDof);CHKERRQ(ierr); 404c4762a1bSJed Brown if (cDof) { 405c4762a1bSJed Brown PetscInt cOff, a, aDof, aOff, j; 406*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(cDof != 1,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Found %d anchor points: should be just one",cDof); 407c4762a1bSJed Brown 408c4762a1bSJed Brown /* find the anchor point */ 409c4762a1bSJed Brown ierr = PetscSectionGetOffset(aSec,c,&cOff);CHKERRQ(ierr); 410c4762a1bSJed Brown a = anchors[cOff]; 411c4762a1bSJed Brown 412c4762a1bSJed Brown /* find the constrained dofs (row in constraint matrix) */ 413c4762a1bSJed Brown ierr = PetscSectionGetDof(cSec,c,&cDof);CHKERRQ(ierr); 414c4762a1bSJed Brown ierr = PetscSectionGetOffset(cSec,c,&cOff);CHKERRQ(ierr); 415c4762a1bSJed Brown 416c4762a1bSJed Brown /* find the anchor dofs (column in constraint matrix) */ 417c4762a1bSJed Brown ierr = PetscSectionGetDof(section,a,&aDof);CHKERRQ(ierr); 418c4762a1bSJed Brown ierr = PetscSectionGetOffset(section,a,&aOff);CHKERRQ(ierr); 419c4762a1bSJed Brown 420*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(cDof != aDof,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Point and anchor have different number of dofs: %d, %d",cDof,aDof); 421*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(cDof % numComp,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Point dofs not divisible by field components: %d, %d",cDof,numComp); 422c4762a1bSJed Brown 423c4762a1bSJed Brown /* put in a simple equality constraint */ 424c4762a1bSJed Brown for (j = 0; j < cDof; j++) { 425c4762a1bSJed Brown ierr = MatSetValue(cMat,cOff+j,aOff+j,1.,INSERT_VALUES);CHKERRQ(ierr); 426c4762a1bSJed Brown } 427c4762a1bSJed Brown } 428c4762a1bSJed Brown } 429c4762a1bSJed Brown ierr = MatAssemblyBegin(cMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 430c4762a1bSJed Brown ierr = MatAssemblyEnd(cMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 431c4762a1bSJed Brown ierr = ISRestoreIndices(aIS,&anchors);CHKERRQ(ierr); 432c4762a1bSJed Brown 433c4762a1bSJed Brown /* Now that we have constructed the constraint matrix, any FE matrix 434c4762a1bSJed Brown * that we construct will apply the constraints during construction */ 435c4762a1bSJed Brown 436c4762a1bSJed Brown ierr = DMCreateMatrix(dm,&mass);CHKERRQ(ierr); 437c4762a1bSJed Brown /* get a dummy local variable to serve as the solution */ 438c4762a1bSJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 439c4762a1bSJed Brown ierr = DMGetDS(dm,&ds);CHKERRQ(ierr); 440c4762a1bSJed Brown /* set the jacobian to be the mass matrix */ 441c4762a1bSJed Brown ierr = PetscDSSetJacobian(ds, 0, 0, simple_mass, NULL, NULL, NULL);CHKERRQ(ierr); 442c4762a1bSJed Brown /* build the mass matrix */ 443c4762a1bSJed Brown ierr = DMPlexSNESComputeJacobianFEM(dm,local,mass,mass,NULL);CHKERRQ(ierr); 444c4762a1bSJed Brown ierr = MatView(mass,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 445c4762a1bSJed Brown ierr = MatDestroy(&mass);CHKERRQ(ierr); 446c4762a1bSJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 447c4762a1bSJed Brown } 448c4762a1bSJed Brown } 449c4762a1bSJed Brown PetscFunctionReturn(0); 450c4762a1bSJed Brown } 451c4762a1bSJed Brown 452c4762a1bSJed Brown static PetscErrorCode TestFEJacobian(DM dm, AppCtx *user) 453c4762a1bSJed Brown { 454c4762a1bSJed Brown PetscErrorCode ierr; 455c4762a1bSJed Brown 456c4762a1bSJed Brown PetscFunctionBeginUser; 45730602db0SMatthew G. Knepley if (!user->useDA) { 458c4762a1bSJed Brown Vec local; 459c4762a1bSJed Brown const Vec *vecs; 460c4762a1bSJed Brown Mat E; 461c4762a1bSJed Brown MatNullSpace sp; 462c4762a1bSJed Brown PetscBool isNullSpace, hasConst; 46330602db0SMatthew G. Knepley PetscInt dim, n, i; 464c4762a1bSJed Brown Vec res = NULL, localX, localRes; 465c4762a1bSJed Brown PetscDS ds; 466c4762a1bSJed Brown 46730602db0SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 468*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(user->numComponents != dim,PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_OUTOFRANGE, "The number of components %d must be equal to the dimension %d for this test", user->numComponents, dim); 469c4762a1bSJed Brown ierr = DMGetDS(dm,&ds);CHKERRQ(ierr); 470c4762a1bSJed Brown ierr = PetscDSSetJacobian(ds,0,0,NULL,NULL,NULL,symmetric_gradient_inner_product);CHKERRQ(ierr); 471c4762a1bSJed Brown ierr = DMCreateMatrix(dm,&E);CHKERRQ(ierr); 472c4762a1bSJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 473c4762a1bSJed Brown ierr = DMPlexSNESComputeJacobianFEM(dm,local,E,E,NULL);CHKERRQ(ierr); 47456cf3b9cSMatthew G. Knepley ierr = DMPlexCreateRigidBody(dm,0,&sp);CHKERRQ(ierr); 475c4762a1bSJed Brown ierr = MatNullSpaceGetVecs(sp,&hasConst,&n,&vecs);CHKERRQ(ierr); 476c4762a1bSJed Brown if (n) {ierr = VecDuplicate(vecs[0],&res);CHKERRQ(ierr);} 477c4762a1bSJed Brown ierr = DMCreateLocalVector(dm,&localX);CHKERRQ(ierr); 478c4762a1bSJed Brown ierr = DMCreateLocalVector(dm,&localRes);CHKERRQ(ierr); 479c4762a1bSJed Brown for (i = 0; i < n; i++) { /* also test via matrix-free Jacobian application */ 480c4762a1bSJed Brown PetscReal resNorm; 481c4762a1bSJed Brown 482c4762a1bSJed Brown ierr = VecSet(localRes,0.);CHKERRQ(ierr); 483c4762a1bSJed Brown ierr = VecSet(localX,0.);CHKERRQ(ierr); 484c4762a1bSJed Brown ierr = VecSet(local,0.);CHKERRQ(ierr); 485c4762a1bSJed Brown ierr = VecSet(res,0.);CHKERRQ(ierr); 486c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(dm,vecs[i],INSERT_VALUES,localX);CHKERRQ(ierr); 487c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(dm,vecs[i],INSERT_VALUES,localX);CHKERRQ(ierr); 4888e3a2eefSMatthew G. Knepley ierr = DMSNESComputeJacobianAction(dm,local,localX,localRes,NULL);CHKERRQ(ierr); 489c4762a1bSJed Brown ierr = DMLocalToGlobalBegin(dm,localRes,ADD_VALUES,res);CHKERRQ(ierr); 490c4762a1bSJed Brown ierr = DMLocalToGlobalEnd(dm,localRes,ADD_VALUES,res);CHKERRQ(ierr); 491c4762a1bSJed Brown ierr = VecNorm(res,NORM_2,&resNorm);CHKERRQ(ierr); 492c4762a1bSJed Brown if (resNorm > PETSC_SMALL) { 493c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject)dm),"Symmetric gradient action null space vector %D residual: %E\n",i,resNorm);CHKERRQ(ierr); 494c4762a1bSJed Brown } 495c4762a1bSJed Brown } 496c4762a1bSJed Brown ierr = VecDestroy(&localRes);CHKERRQ(ierr); 497c4762a1bSJed Brown ierr = VecDestroy(&localX);CHKERRQ(ierr); 498c4762a1bSJed Brown ierr = VecDestroy(&res);CHKERRQ(ierr); 499c4762a1bSJed Brown ierr = MatNullSpaceTest(sp,E,&isNullSpace);CHKERRQ(ierr); 500c4762a1bSJed Brown if (isNullSpace) { 501c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject)dm),"Symmetric gradient null space: PASS\n");CHKERRQ(ierr); 502c4762a1bSJed Brown } else { 503c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject)dm),"Symmetric gradient null space: FAIL\n");CHKERRQ(ierr); 504c4762a1bSJed Brown } 505c4762a1bSJed Brown ierr = MatNullSpaceDestroy(&sp);CHKERRQ(ierr); 506c4762a1bSJed Brown ierr = MatDestroy(&E);CHKERRQ(ierr); 507c4762a1bSJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 508c4762a1bSJed Brown } 509c4762a1bSJed Brown PetscFunctionReturn(0); 510c4762a1bSJed Brown } 511c4762a1bSJed Brown 512c4762a1bSJed Brown static PetscErrorCode TestInjector(DM dm, AppCtx *user) 513c4762a1bSJed Brown { 514c4762a1bSJed Brown DM refTree; 515c4762a1bSJed Brown PetscMPIInt rank; 516c4762a1bSJed Brown PetscErrorCode ierr; 517c4762a1bSJed Brown 518c4762a1bSJed Brown PetscFunctionBegin; 519c4762a1bSJed Brown ierr = DMPlexGetReferenceTree(dm,&refTree);CHKERRQ(ierr); 520c4762a1bSJed Brown if (refTree) { 521c4762a1bSJed Brown Mat inj; 522c4762a1bSJed Brown 523c4762a1bSJed Brown ierr = DMPlexComputeInjectorReferenceTree(refTree,&inj);CHKERRQ(ierr); 524c4762a1bSJed Brown ierr = PetscObjectSetName((PetscObject)inj,"Reference Tree Injector");CHKERRQ(ierr); 525ffc4695bSBarry Smith ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRMPI(ierr); 526dd400576SPatrick Sanan if (rank == 0) { 527c4762a1bSJed Brown ierr = MatView(inj,PETSC_VIEWER_STDOUT_SELF);CHKERRQ(ierr); 528c4762a1bSJed Brown } 529c4762a1bSJed Brown ierr = MatDestroy(&inj);CHKERRQ(ierr); 530c4762a1bSJed Brown } 531c4762a1bSJed Brown PetscFunctionReturn(0); 532c4762a1bSJed Brown } 533c4762a1bSJed Brown 534c4762a1bSJed Brown static PetscErrorCode TestFVGrad(DM dm, AppCtx *user) 535c4762a1bSJed Brown { 536c4762a1bSJed Brown MPI_Comm comm; 537c4762a1bSJed Brown DM dmRedist, dmfv, dmgrad, dmCell, refTree; 538c4762a1bSJed Brown PetscFV fv; 53930602db0SMatthew G. Knepley PetscInt dim, nvecs, v, cStart, cEnd, cEndInterior; 540c4762a1bSJed Brown PetscMPIInt size; 541c4762a1bSJed Brown Vec cellgeom, grad, locGrad; 542c4762a1bSJed Brown const PetscScalar *cgeom; 543c4762a1bSJed Brown PetscReal allVecMaxDiff = 0., fvTol = 100. * PETSC_MACHINE_EPSILON; 544c4762a1bSJed Brown PetscErrorCode ierr; 545c4762a1bSJed Brown 546c4762a1bSJed Brown PetscFunctionBeginUser; 547c4762a1bSJed Brown comm = PetscObjectComm((PetscObject)dm); 54830602db0SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 549c4762a1bSJed Brown /* duplicate DM, give dup. a FV discretization */ 550c4762a1bSJed Brown ierr = DMSetBasicAdjacency(dm,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 551ffc4695bSBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr); 552c4762a1bSJed Brown dmRedist = NULL; 553c4762a1bSJed Brown if (size > 1) { 554c4762a1bSJed Brown ierr = DMPlexDistributeOverlap(dm,1,NULL,&dmRedist);CHKERRQ(ierr); 555c4762a1bSJed Brown } 556c4762a1bSJed Brown if (!dmRedist) { 557c4762a1bSJed Brown dmRedist = dm; 558c4762a1bSJed Brown ierr = PetscObjectReference((PetscObject)dmRedist);CHKERRQ(ierr); 559c4762a1bSJed Brown } 560c4762a1bSJed Brown ierr = PetscFVCreate(comm,&fv);CHKERRQ(ierr); 561c4762a1bSJed Brown ierr = PetscFVSetType(fv,PETSCFVLEASTSQUARES);CHKERRQ(ierr); 562c4762a1bSJed Brown ierr = PetscFVSetNumComponents(fv,user->numComponents);CHKERRQ(ierr); 56330602db0SMatthew G. Knepley ierr = PetscFVSetSpatialDimension(fv,dim);CHKERRQ(ierr); 564c4762a1bSJed Brown ierr = PetscFVSetFromOptions(fv);CHKERRQ(ierr); 565c4762a1bSJed Brown ierr = PetscFVSetUp(fv);CHKERRQ(ierr); 566c4762a1bSJed Brown ierr = DMPlexConstructGhostCells(dmRedist,NULL,NULL,&dmfv);CHKERRQ(ierr); 567c4762a1bSJed Brown ierr = DMDestroy(&dmRedist);CHKERRQ(ierr); 568c4762a1bSJed Brown ierr = DMSetNumFields(dmfv,1);CHKERRQ(ierr); 569c4762a1bSJed Brown ierr = DMSetField(dmfv, 0, NULL, (PetscObject) fv);CHKERRQ(ierr); 570c4762a1bSJed Brown ierr = DMCreateDS(dmfv);CHKERRQ(ierr); 571c4762a1bSJed Brown ierr = DMPlexGetReferenceTree(dm,&refTree);CHKERRQ(ierr); 572c4762a1bSJed Brown if (refTree) {ierr = DMCopyDisc(dmfv,refTree);CHKERRQ(ierr);} 5733e9753d6SMatthew G. Knepley ierr = DMPlexGetGradientDM(dmfv, fv, &dmgrad);CHKERRQ(ierr); 574c4762a1bSJed Brown ierr = DMPlexGetHeightStratum(dmfv,0,&cStart,&cEnd);CHKERRQ(ierr); 57530602db0SMatthew G. Knepley nvecs = dim * (dim+1) / 2; 5763e9753d6SMatthew G. Knepley ierr = DMPlexGetGeometryFVM(dmfv,NULL,&cellgeom,NULL);CHKERRQ(ierr); 577c4762a1bSJed Brown ierr = VecGetDM(cellgeom,&dmCell);CHKERRQ(ierr); 578c4762a1bSJed Brown ierr = VecGetArrayRead(cellgeom,&cgeom);CHKERRQ(ierr); 579c4762a1bSJed Brown ierr = DMGetGlobalVector(dmgrad,&grad);CHKERRQ(ierr); 580c4762a1bSJed Brown ierr = DMGetLocalVector(dmgrad,&locGrad);CHKERRQ(ierr); 581c4762a1bSJed Brown ierr = DMPlexGetGhostCellStratum(dmgrad,&cEndInterior,NULL);CHKERRQ(ierr); 582c4762a1bSJed Brown cEndInterior = (cEndInterior < 0) ? cEnd: cEndInterior; 583c4762a1bSJed Brown for (v = 0; v < nvecs; v++) { 584c4762a1bSJed Brown Vec locX; 585c4762a1bSJed Brown PetscInt c; 586c4762a1bSJed Brown PetscScalar trueGrad[3][3] = {{0.}}; 587c4762a1bSJed Brown const PetscScalar *gradArray; 588c4762a1bSJed Brown PetscReal maxDiff, maxDiffGlob; 589c4762a1bSJed Brown 590c4762a1bSJed Brown ierr = DMGetLocalVector(dmfv,&locX);CHKERRQ(ierr); 591c4762a1bSJed Brown /* get the local projection of the rigid body mode */ 592c4762a1bSJed Brown for (c = cStart; c < cEnd; c++) { 593c4762a1bSJed Brown PetscFVCellGeom *cg; 594c4762a1bSJed Brown PetscScalar cx[3] = {0.,0.,0.}; 595c4762a1bSJed Brown 596c4762a1bSJed Brown ierr = DMPlexPointLocalRead(dmCell, c, cgeom, &cg);CHKERRQ(ierr); 59730602db0SMatthew G. Knepley if (v < dim) { 598c4762a1bSJed Brown cx[v] = 1.; 599c4762a1bSJed Brown } else { 60030602db0SMatthew G. Knepley PetscInt w = v - dim; 601c4762a1bSJed Brown 60230602db0SMatthew G. Knepley cx[(w + 1) % dim] = cg->centroid[(w + 2) % dim]; 60330602db0SMatthew G. Knepley cx[(w + 2) % dim] = -cg->centroid[(w + 1) % dim]; 604c4762a1bSJed Brown } 605c4762a1bSJed Brown ierr = DMPlexVecSetClosure(dmfv,NULL,locX,c,cx,INSERT_ALL_VALUES);CHKERRQ(ierr); 606c4762a1bSJed Brown } 607c4762a1bSJed Brown /* TODO: this isn't in any header */ 608c4762a1bSJed Brown ierr = DMPlexReconstructGradientsFVM(dmfv,locX,grad);CHKERRQ(ierr); 609c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(dmgrad,grad,INSERT_VALUES,locGrad);CHKERRQ(ierr); 610c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(dmgrad,grad,INSERT_VALUES,locGrad);CHKERRQ(ierr); 611c4762a1bSJed Brown ierr = VecGetArrayRead(locGrad,&gradArray);CHKERRQ(ierr); 612c4762a1bSJed Brown /* compare computed gradient to exact gradient */ 61330602db0SMatthew G. Knepley if (v >= dim) { 61430602db0SMatthew G. Knepley PetscInt w = v - dim; 615c4762a1bSJed Brown 61630602db0SMatthew G. Knepley trueGrad[(w + 1) % dim][(w + 2) % dim] = 1.; 61730602db0SMatthew G. Knepley trueGrad[(w + 2) % dim][(w + 1) % dim] = -1.; 618c4762a1bSJed Brown } 619c4762a1bSJed Brown maxDiff = 0.; 620c4762a1bSJed Brown for (c = cStart; c < cEndInterior; c++) { 621c4762a1bSJed Brown PetscScalar *compGrad; 622c4762a1bSJed Brown PetscInt i, j, k; 623c4762a1bSJed Brown PetscReal FrobDiff = 0.; 624c4762a1bSJed Brown 625c4762a1bSJed Brown ierr = DMPlexPointLocalRead(dmgrad, c, gradArray, &compGrad);CHKERRQ(ierr); 626c4762a1bSJed Brown 62730602db0SMatthew G. Knepley for (i = 0, k = 0; i < dim; i++) { 62830602db0SMatthew G. Knepley for (j = 0; j < dim; j++, k++) { 629c4762a1bSJed Brown PetscScalar diff = compGrad[k] - trueGrad[i][j]; 630c4762a1bSJed Brown FrobDiff += PetscRealPart(diff * PetscConj(diff)); 631c4762a1bSJed Brown } 632c4762a1bSJed Brown } 633c4762a1bSJed Brown FrobDiff = PetscSqrtReal(FrobDiff); 634c4762a1bSJed Brown maxDiff = PetscMax(maxDiff,FrobDiff); 635c4762a1bSJed Brown } 636ffc4695bSBarry Smith ierr = MPI_Allreduce(&maxDiff,&maxDiffGlob,1,MPIU_REAL,MPIU_MAX,comm);CHKERRMPI(ierr); 637c4762a1bSJed Brown allVecMaxDiff = PetscMax(allVecMaxDiff,maxDiffGlob); 638c4762a1bSJed Brown ierr = VecRestoreArrayRead(locGrad,&gradArray);CHKERRQ(ierr); 639c4762a1bSJed Brown ierr = DMRestoreLocalVector(dmfv,&locX);CHKERRQ(ierr); 640c4762a1bSJed Brown } 641c4762a1bSJed Brown if (allVecMaxDiff < fvTol) { 642c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject)dm),"Finite volume gradient reconstruction: PASS\n");CHKERRQ(ierr); 643c4762a1bSJed Brown } else { 644c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject)dm),"Finite volume gradient reconstruction: FAIL at tolerance %g with max difference %g\n",fvTol,allVecMaxDiff);CHKERRQ(ierr); 645c4762a1bSJed Brown } 646c4762a1bSJed Brown ierr = DMRestoreLocalVector(dmgrad,&locGrad);CHKERRQ(ierr); 647c4762a1bSJed Brown ierr = DMRestoreGlobalVector(dmgrad,&grad);CHKERRQ(ierr); 648c4762a1bSJed Brown ierr = VecRestoreArrayRead(cellgeom,&cgeom);CHKERRQ(ierr); 649c4762a1bSJed Brown ierr = DMDestroy(&dmfv);CHKERRQ(ierr); 650c4762a1bSJed Brown ierr = PetscFVDestroy(&fv);CHKERRQ(ierr); 651c4762a1bSJed Brown PetscFunctionReturn(0); 652c4762a1bSJed Brown } 653c4762a1bSJed Brown 654c4762a1bSJed Brown static PetscErrorCode ComputeError(DM dm, PetscErrorCode (**exactFuncs)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar *, void *), 655c4762a1bSJed Brown PetscErrorCode (**exactFuncDers)(PetscInt, PetscReal, const PetscReal[], const PetscReal[], PetscInt, PetscScalar *, void *), 656c4762a1bSJed Brown void **exactCtxs, PetscReal *error, PetscReal *errorDer, AppCtx *user) 657c4762a1bSJed Brown { 658c4762a1bSJed Brown Vec u; 659c4762a1bSJed Brown PetscReal n[3] = {1.0, 1.0, 1.0}; 660c4762a1bSJed Brown PetscErrorCode ierr; 661c4762a1bSJed Brown 662c4762a1bSJed Brown PetscFunctionBeginUser; 663c4762a1bSJed Brown ierr = DMGetGlobalVector(dm, &u);CHKERRQ(ierr); 664c4762a1bSJed Brown /* Project function into FE function space */ 665c4762a1bSJed Brown ierr = DMProjectFunction(dm, 0.0, exactFuncs, exactCtxs, INSERT_ALL_VALUES, u);CHKERRQ(ierr); 666c4762a1bSJed Brown ierr = VecViewFromOptions(u, NULL, "-projection_view");CHKERRQ(ierr); 667c4762a1bSJed Brown /* Compare approximation to exact in L_2 */ 668c4762a1bSJed Brown ierr = DMComputeL2Diff(dm, 0.0, exactFuncs, exactCtxs, u, error);CHKERRQ(ierr); 669c4762a1bSJed Brown ierr = DMComputeL2GradientDiff(dm, 0.0, exactFuncDers, exactCtxs, u, n, errorDer);CHKERRQ(ierr); 670c4762a1bSJed Brown ierr = DMRestoreGlobalVector(dm, &u);CHKERRQ(ierr); 671c4762a1bSJed Brown PetscFunctionReturn(0); 672c4762a1bSJed Brown } 673c4762a1bSJed Brown 674c4762a1bSJed Brown static PetscErrorCode CheckFunctions(DM dm, PetscInt order, AppCtx *user) 675c4762a1bSJed Brown { 676c4762a1bSJed Brown PetscErrorCode (*exactFuncs[1]) (PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx); 677c4762a1bSJed Brown PetscErrorCode (*exactFuncDers[1]) (PetscInt dim, PetscReal time, const PetscReal x[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx); 678c4762a1bSJed Brown void *exactCtxs[3]; 679c4762a1bSJed Brown MPI_Comm comm; 680c4762a1bSJed Brown PetscReal error, errorDer, tol = PETSC_SMALL; 681c4762a1bSJed Brown PetscErrorCode ierr; 682c4762a1bSJed Brown 683c4762a1bSJed Brown PetscFunctionBeginUser; 684c4762a1bSJed Brown exactCtxs[0] = user; 685c4762a1bSJed Brown exactCtxs[1] = user; 686c4762a1bSJed Brown exactCtxs[2] = user; 687c4762a1bSJed Brown ierr = PetscObjectGetComm((PetscObject)dm, &comm);CHKERRQ(ierr); 688c4762a1bSJed Brown /* Setup functions to approximate */ 689c4762a1bSJed Brown switch (order) { 690c4762a1bSJed Brown case 0: 691c4762a1bSJed Brown exactFuncs[0] = constant; 692c4762a1bSJed Brown exactFuncDers[0] = constantDer; 693c4762a1bSJed Brown break; 694c4762a1bSJed Brown case 1: 695c4762a1bSJed Brown exactFuncs[0] = linear; 696c4762a1bSJed Brown exactFuncDers[0] = linearDer; 697c4762a1bSJed Brown break; 698c4762a1bSJed Brown case 2: 699c4762a1bSJed Brown exactFuncs[0] = quadratic; 700c4762a1bSJed Brown exactFuncDers[0] = quadraticDer; 701c4762a1bSJed Brown break; 702c4762a1bSJed Brown case 3: 703c4762a1bSJed Brown exactFuncs[0] = cubic; 704c4762a1bSJed Brown exactFuncDers[0] = cubicDer; 705c4762a1bSJed Brown break; 706c4762a1bSJed Brown default: 70798921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_OUTOFRANGE, "Could not determine functions to test for order %d", order); 708c4762a1bSJed Brown } 709c4762a1bSJed Brown ierr = ComputeError(dm, exactFuncs, exactFuncDers, exactCtxs, &error, &errorDer, user);CHKERRQ(ierr); 710c4762a1bSJed Brown /* Report result */ 711c4762a1bSJed Brown if (error > tol) {ierr = PetscPrintf(comm, "Function tests FAIL for order %D at tolerance %g error %g\n", order, (double)tol,(double) error);CHKERRQ(ierr);} 712c4762a1bSJed Brown else {ierr = PetscPrintf(comm, "Function tests pass for order %D at tolerance %g\n", order, (double)tol);CHKERRQ(ierr);} 713c4762a1bSJed Brown if (errorDer > tol) {ierr = PetscPrintf(comm, "Function tests FAIL for order %D derivatives at tolerance %g error %g\n", order, (double)tol, (double)errorDer);CHKERRQ(ierr);} 714c4762a1bSJed Brown else {ierr = PetscPrintf(comm, "Function tests pass for order %D derivatives at tolerance %g\n", order, (double)tol);CHKERRQ(ierr);} 715c4762a1bSJed Brown PetscFunctionReturn(0); 716c4762a1bSJed Brown } 717c4762a1bSJed Brown 718c4762a1bSJed Brown static PetscErrorCode CheckInterpolation(DM dm, PetscBool checkRestrict, PetscInt order, AppCtx *user) 719c4762a1bSJed Brown { 720c4762a1bSJed Brown PetscErrorCode (*exactFuncs[1]) (PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx); 721c4762a1bSJed Brown PetscErrorCode (*exactFuncDers[1]) (PetscInt, PetscReal, const PetscReal x[], const PetscReal n[], PetscInt, PetscScalar *u, void *ctx); 722c4762a1bSJed Brown PetscReal n[3] = {1.0, 1.0, 1.0}; 723c4762a1bSJed Brown void *exactCtxs[3]; 724c4762a1bSJed Brown DM rdm, idm, fdm; 725c4762a1bSJed Brown Mat Interp; 726c4762a1bSJed Brown Vec iu, fu, scaling; 727c4762a1bSJed Brown MPI_Comm comm; 72830602db0SMatthew G. Knepley PetscInt dim; 729c4762a1bSJed Brown PetscReal error, errorDer, tol = PETSC_SMALL; 730c4762a1bSJed Brown PetscErrorCode ierr; 731c4762a1bSJed Brown 732c4762a1bSJed Brown PetscFunctionBeginUser; 733c4762a1bSJed Brown exactCtxs[0] = user; 734c4762a1bSJed Brown exactCtxs[1] = user; 735c4762a1bSJed Brown exactCtxs[2] = user; 736c4762a1bSJed Brown ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr); 73730602db0SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 738c4762a1bSJed Brown ierr = DMRefine(dm, comm, &rdm);CHKERRQ(ierr); 739c4762a1bSJed Brown ierr = DMSetCoarseDM(rdm, dm);CHKERRQ(ierr); 740c4762a1bSJed Brown ierr = DMPlexSetRegularRefinement(rdm, user->convRefine);CHKERRQ(ierr); 74130602db0SMatthew G. Knepley if (user->tree) { 742c4762a1bSJed Brown DM refTree; 743c4762a1bSJed Brown ierr = DMPlexGetReferenceTree(dm,&refTree);CHKERRQ(ierr); 744c4762a1bSJed Brown ierr = DMPlexSetReferenceTree(rdm,refTree);CHKERRQ(ierr); 745c4762a1bSJed Brown } 74630602db0SMatthew G. Knepley if (user->useDA) {ierr = DMDASetVertexCoordinates(rdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0);CHKERRQ(ierr);} 747c4762a1bSJed Brown ierr = SetupSection(rdm, user);CHKERRQ(ierr); 748c4762a1bSJed Brown /* Setup functions to approximate */ 749c4762a1bSJed Brown switch (order) { 750c4762a1bSJed Brown case 0: 751c4762a1bSJed Brown exactFuncs[0] = constant; 752c4762a1bSJed Brown exactFuncDers[0] = constantDer; 753c4762a1bSJed Brown break; 754c4762a1bSJed Brown case 1: 755c4762a1bSJed Brown exactFuncs[0] = linear; 756c4762a1bSJed Brown exactFuncDers[0] = linearDer; 757c4762a1bSJed Brown break; 758c4762a1bSJed Brown case 2: 759c4762a1bSJed Brown exactFuncs[0] = quadratic; 760c4762a1bSJed Brown exactFuncDers[0] = quadraticDer; 761c4762a1bSJed Brown break; 762c4762a1bSJed Brown case 3: 763c4762a1bSJed Brown exactFuncs[0] = cubic; 764c4762a1bSJed Brown exactFuncDers[0] = cubicDer; 765c4762a1bSJed Brown break; 766c4762a1bSJed Brown default: 76798921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_OUTOFRANGE, "Could not determine functions to test for dimension %D order %D", dim, order); 768c4762a1bSJed Brown } 769c4762a1bSJed Brown idm = checkRestrict ? rdm : dm; 770c4762a1bSJed Brown fdm = checkRestrict ? dm : rdm; 771c4762a1bSJed Brown ierr = DMGetGlobalVector(idm, &iu);CHKERRQ(ierr); 772c4762a1bSJed Brown ierr = DMGetGlobalVector(fdm, &fu);CHKERRQ(ierr); 773c4762a1bSJed Brown ierr = DMSetApplicationContext(dm, user);CHKERRQ(ierr); 774c4762a1bSJed Brown ierr = DMSetApplicationContext(rdm, user);CHKERRQ(ierr); 775c4762a1bSJed Brown ierr = DMCreateInterpolation(dm, rdm, &Interp, &scaling);CHKERRQ(ierr); 776c4762a1bSJed Brown /* Project function into initial FE function space */ 777c4762a1bSJed Brown ierr = DMProjectFunction(idm, 0.0, exactFuncs, exactCtxs, INSERT_ALL_VALUES, iu);CHKERRQ(ierr); 778c4762a1bSJed Brown /* Interpolate function into final FE function space */ 779c4762a1bSJed Brown if (checkRestrict) {ierr = MatRestrict(Interp, iu, fu);CHKERRQ(ierr);ierr = VecPointwiseMult(fu, scaling, fu);CHKERRQ(ierr);} 780c4762a1bSJed Brown else {ierr = MatInterpolate(Interp, iu, fu);CHKERRQ(ierr);} 781c4762a1bSJed Brown /* Compare approximation to exact in L_2 */ 782c4762a1bSJed Brown ierr = DMComputeL2Diff(fdm, 0.0, exactFuncs, exactCtxs, fu, &error);CHKERRQ(ierr); 783c4762a1bSJed Brown ierr = DMComputeL2GradientDiff(fdm, 0.0, exactFuncDers, exactCtxs, fu, n, &errorDer);CHKERRQ(ierr); 784c4762a1bSJed Brown /* Report result */ 785c4762a1bSJed Brown if (error > tol) {ierr = PetscPrintf(comm, "Interpolation tests FAIL for order %D at tolerance %g error %g\n", order, (double)tol, (double)error);CHKERRQ(ierr);} 786c4762a1bSJed Brown else {ierr = PetscPrintf(comm, "Interpolation tests pass for order %D at tolerance %g\n", order, (double)tol);CHKERRQ(ierr);} 787c4762a1bSJed Brown if (errorDer > tol) {ierr = PetscPrintf(comm, "Interpolation tests FAIL for order %D derivatives at tolerance %g error %g\n", order, (double)tol, (double)errorDer);CHKERRQ(ierr);} 788c4762a1bSJed Brown else {ierr = PetscPrintf(comm, "Interpolation tests pass for order %D derivatives at tolerance %g\n", order, (double)tol);CHKERRQ(ierr);} 789c4762a1bSJed Brown ierr = DMRestoreGlobalVector(idm, &iu);CHKERRQ(ierr); 790c4762a1bSJed Brown ierr = DMRestoreGlobalVector(fdm, &fu);CHKERRQ(ierr); 791c4762a1bSJed Brown ierr = MatDestroy(&Interp);CHKERRQ(ierr); 792c4762a1bSJed Brown ierr = VecDestroy(&scaling);CHKERRQ(ierr); 793c4762a1bSJed Brown ierr = DMDestroy(&rdm);CHKERRQ(ierr); 794c4762a1bSJed Brown PetscFunctionReturn(0); 795c4762a1bSJed Brown } 796c4762a1bSJed Brown 797c4762a1bSJed Brown static PetscErrorCode CheckConvergence(DM dm, PetscInt Nr, AppCtx *user) 798c4762a1bSJed Brown { 799c4762a1bSJed Brown DM odm = dm, rdm = NULL, cdm = NULL; 800c4762a1bSJed Brown PetscErrorCode (*exactFuncs[1]) (PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx) = {trig}; 801c4762a1bSJed Brown PetscErrorCode (*exactFuncDers[1]) (PetscInt dim, PetscReal time, const PetscReal x[], const PetscReal n[], PetscInt Nf, PetscScalar *u, void *ctx) = {trigDer}; 802c4762a1bSJed Brown void *exactCtxs[3]; 803c4762a1bSJed Brown PetscInt r, c, cStart, cEnd; 804c4762a1bSJed Brown PetscReal errorOld, errorDerOld, error, errorDer, rel, len, lenOld; 805c4762a1bSJed Brown double p; 806c4762a1bSJed Brown PetscErrorCode ierr; 807c4762a1bSJed Brown 808c4762a1bSJed Brown PetscFunctionBeginUser; 809c4762a1bSJed Brown if (!user->convergence) PetscFunctionReturn(0); 810c4762a1bSJed Brown exactCtxs[0] = user; 811c4762a1bSJed Brown exactCtxs[1] = user; 812c4762a1bSJed Brown exactCtxs[2] = user; 813c4762a1bSJed Brown ierr = PetscObjectReference((PetscObject) odm);CHKERRQ(ierr); 814c4762a1bSJed Brown if (!user->convRefine) { 815c4762a1bSJed Brown for (r = 0; r < Nr; ++r) { 816c4762a1bSJed Brown ierr = DMRefine(odm, PetscObjectComm((PetscObject) dm), &rdm);CHKERRQ(ierr); 817c4762a1bSJed Brown ierr = DMDestroy(&odm);CHKERRQ(ierr); 818c4762a1bSJed Brown odm = rdm; 819c4762a1bSJed Brown } 820c4762a1bSJed Brown ierr = SetupSection(odm, user);CHKERRQ(ierr); 821c4762a1bSJed Brown } 822c4762a1bSJed Brown ierr = ComputeError(odm, exactFuncs, exactFuncDers, exactCtxs, &errorOld, &errorDerOld, user);CHKERRQ(ierr); 823c4762a1bSJed Brown if (user->convRefine) { 824c4762a1bSJed Brown for (r = 0; r < Nr; ++r) { 825c4762a1bSJed Brown ierr = DMRefine(odm, PetscObjectComm((PetscObject) dm), &rdm);CHKERRQ(ierr); 82630602db0SMatthew G. Knepley if (user->useDA) {ierr = DMDASetVertexCoordinates(rdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0);CHKERRQ(ierr);} 827c4762a1bSJed Brown ierr = SetupSection(rdm, user);CHKERRQ(ierr); 828c4762a1bSJed Brown ierr = ComputeError(rdm, exactFuncs, exactFuncDers, exactCtxs, &error, &errorDer, user);CHKERRQ(ierr); 829c4762a1bSJed Brown p = PetscLog2Real(errorOld/error); 830c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Function convergence rate at refinement %D: %.2f\n", r, (double)p);CHKERRQ(ierr); 831c4762a1bSJed Brown p = PetscLog2Real(errorDerOld/errorDer); 832c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Derivative convergence rate at refinement %D: %.2f\n", r, (double)p);CHKERRQ(ierr); 833c4762a1bSJed Brown ierr = DMDestroy(&odm);CHKERRQ(ierr); 834c4762a1bSJed Brown odm = rdm; 835c4762a1bSJed Brown errorOld = error; 836c4762a1bSJed Brown errorDerOld = errorDer; 837c4762a1bSJed Brown } 838c4762a1bSJed Brown } else { 839c4762a1bSJed Brown /* ierr = ComputeLongestEdge(dm, &lenOld);CHKERRQ(ierr); */ 840c4762a1bSJed Brown ierr = DMPlexGetHeightStratum(odm, 0, &cStart, &cEnd);CHKERRQ(ierr); 841c4762a1bSJed Brown lenOld = cEnd - cStart; 842c4762a1bSJed Brown for (c = 0; c < Nr; ++c) { 843c4762a1bSJed Brown ierr = DMCoarsen(odm, PetscObjectComm((PetscObject) dm), &cdm);CHKERRQ(ierr); 84430602db0SMatthew G. Knepley if (user->useDA) {ierr = DMDASetVertexCoordinates(cdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0);CHKERRQ(ierr);} 845c4762a1bSJed Brown ierr = SetupSection(cdm, user);CHKERRQ(ierr); 846c4762a1bSJed Brown ierr = ComputeError(cdm, exactFuncs, exactFuncDers, exactCtxs, &error, &errorDer, user);CHKERRQ(ierr); 847c4762a1bSJed Brown /* ierr = ComputeLongestEdge(cdm, &len);CHKERRQ(ierr); */ 848c4762a1bSJed Brown ierr = DMPlexGetHeightStratum(cdm, 0, &cStart, &cEnd);CHKERRQ(ierr); 849c4762a1bSJed Brown len = cEnd - cStart; 850c4762a1bSJed Brown rel = error/errorOld; 851c4762a1bSJed Brown p = PetscLogReal(rel) / PetscLogReal(lenOld / len); 852c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Function convergence rate at coarsening %D: %.2f\n", c, (double)p);CHKERRQ(ierr); 853c4762a1bSJed Brown rel = errorDer/errorDerOld; 854c4762a1bSJed Brown p = PetscLogReal(rel) / PetscLogReal(lenOld / len); 855c4762a1bSJed Brown ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Derivative convergence rate at coarsening %D: %.2f\n", c, (double)p);CHKERRQ(ierr); 856c4762a1bSJed Brown ierr = DMDestroy(&odm);CHKERRQ(ierr); 857c4762a1bSJed Brown odm = cdm; 858c4762a1bSJed Brown errorOld = error; 859c4762a1bSJed Brown errorDerOld = errorDer; 860c4762a1bSJed Brown lenOld = len; 861c4762a1bSJed Brown } 862c4762a1bSJed Brown } 863c4762a1bSJed Brown ierr = DMDestroy(&odm);CHKERRQ(ierr); 864c4762a1bSJed Brown PetscFunctionReturn(0); 865c4762a1bSJed Brown } 866c4762a1bSJed Brown 867c4762a1bSJed Brown int main(int argc, char **argv) 868c4762a1bSJed Brown { 869c4762a1bSJed Brown DM dm; 870c4762a1bSJed Brown AppCtx user; /* user-defined work context */ 87130602db0SMatthew G. Knepley PetscInt dim = 2; 87230602db0SMatthew G. Knepley PetscBool simplex = PETSC_FALSE; 873c4762a1bSJed Brown PetscErrorCode ierr; 874c4762a1bSJed Brown 875c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; 876c4762a1bSJed Brown ierr = ProcessOptions(PETSC_COMM_WORLD, &user);CHKERRQ(ierr); 877c4762a1bSJed Brown ierr = CreateMesh(PETSC_COMM_WORLD, &user, &dm);CHKERRQ(ierr); 87830602db0SMatthew G. Knepley if (!user.useDA) { 87930602db0SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 88030602db0SMatthew G. Knepley ierr = DMPlexIsSimplex(dm, &simplex);CHKERRQ(ierr); 88130602db0SMatthew G. Knepley } 8822ed40230SJoe Wallwork ierr = DMPlexMetricSetFromOptions(dm);CHKERRQ(ierr); 88330602db0SMatthew G. Knepley user.numComponents = user.numComponents < 0 ? dim : user.numComponents; 88430602db0SMatthew G. Knepley ierr = PetscFECreateDefault(PETSC_COMM_WORLD, dim, user.numComponents, simplex, NULL, user.qorder, &user.fe);CHKERRQ(ierr); 885c4762a1bSJed Brown ierr = SetupSection(dm, &user);CHKERRQ(ierr); 886c4762a1bSJed Brown if (user.testFEjacobian) {ierr = TestFEJacobian(dm, &user);CHKERRQ(ierr);} 887c4762a1bSJed Brown if (user.testFVgrad) {ierr = TestFVGrad(dm, &user);CHKERRQ(ierr);} 888c4762a1bSJed Brown if (user.testInjector) {ierr = TestInjector(dm, &user);CHKERRQ(ierr);} 889c4762a1bSJed Brown ierr = CheckFunctions(dm, user.porder, &user);CHKERRQ(ierr); 890c4762a1bSJed Brown { 891c4762a1bSJed Brown PetscDualSpace dsp; 892c4762a1bSJed Brown PetscInt k; 893c4762a1bSJed Brown 894c4762a1bSJed Brown ierr = PetscFEGetDualSpace(user.fe, &dsp);CHKERRQ(ierr); 895c4762a1bSJed Brown ierr = PetscDualSpaceGetDeRahm(dsp, &k);CHKERRQ(ierr); 89630602db0SMatthew G. Knepley if (dim == 2 && simplex == PETSC_TRUE && user.tree == PETSC_FALSE && k == 0) { 897c4762a1bSJed Brown ierr = CheckInterpolation(dm, PETSC_FALSE, user.porder, &user);CHKERRQ(ierr); 898c4762a1bSJed Brown ierr = CheckInterpolation(dm, PETSC_TRUE, user.porder, &user);CHKERRQ(ierr); 899c4762a1bSJed Brown } 900c4762a1bSJed Brown } 901c4762a1bSJed Brown ierr = CheckConvergence(dm, 3, &user);CHKERRQ(ierr); 902c4762a1bSJed Brown ierr = PetscFEDestroy(&user.fe);CHKERRQ(ierr); 903c4762a1bSJed Brown ierr = DMDestroy(&dm);CHKERRQ(ierr); 904c4762a1bSJed Brown ierr = PetscFinalize(); 905c4762a1bSJed Brown return ierr; 906c4762a1bSJed Brown } 907c4762a1bSJed Brown 908c4762a1bSJed Brown /*TEST 909c4762a1bSJed Brown 910c4762a1bSJed Brown test: 911c4762a1bSJed Brown suffix: 1 912c4762a1bSJed Brown requires: triangle 913c4762a1bSJed Brown 914c4762a1bSJed Brown # 2D P_1 on a triangle 915c4762a1bSJed Brown test: 916c4762a1bSJed Brown suffix: p1_2d_0 917c4762a1bSJed Brown requires: triangle 918c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -convergence 919c4762a1bSJed Brown test: 920c4762a1bSJed Brown suffix: p1_2d_1 921c4762a1bSJed Brown requires: triangle 922c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -porder 1 923c4762a1bSJed Brown test: 924c4762a1bSJed Brown suffix: p1_2d_2 925c4762a1bSJed Brown requires: triangle 926c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -porder 2 927c4762a1bSJed Brown test: 928c4762a1bSJed Brown suffix: p1_2d_3 929e788613bSJoe Wallwork requires: triangle mmg 930c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -convergence -conv_refine 0 931c4762a1bSJed Brown test: 932c4762a1bSJed Brown suffix: p1_2d_4 933e788613bSJoe Wallwork requires: triangle mmg 934c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 1 -conv_refine 0 935c4762a1bSJed Brown test: 936c4762a1bSJed Brown suffix: p1_2d_5 937e788613bSJoe Wallwork requires: triangle mmg 938c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 2 -conv_refine 0 939c4762a1bSJed Brown 940c4762a1bSJed Brown # 3D P_1 on a tetrahedron 941c4762a1bSJed Brown test: 942c4762a1bSJed Brown suffix: p1_3d_0 943c4762a1bSJed Brown requires: ctetgen 94430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -convergence 945c4762a1bSJed Brown test: 946c4762a1bSJed Brown suffix: p1_3d_1 947c4762a1bSJed Brown requires: ctetgen 94830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -porder 1 949c4762a1bSJed Brown test: 950c4762a1bSJed Brown suffix: p1_3d_2 951c4762a1bSJed Brown requires: ctetgen 95230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -porder 2 953c4762a1bSJed Brown test: 954c4762a1bSJed Brown suffix: p1_3d_3 955e788613bSJoe Wallwork requires: ctetgen mmg 95630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -convergence -conv_refine 0 957c4762a1bSJed Brown test: 958c4762a1bSJed Brown suffix: p1_3d_4 959e788613bSJoe Wallwork requires: ctetgen mmg 96030602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 1 -conv_refine 0 961c4762a1bSJed Brown test: 962c4762a1bSJed Brown suffix: p1_3d_5 963e788613bSJoe Wallwork requires: ctetgen mmg 96430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 2 -conv_refine 0 965c4762a1bSJed Brown 966c4762a1bSJed Brown # 2D P_2 on a triangle 967c4762a1bSJed Brown test: 968c4762a1bSJed Brown suffix: p2_2d_0 969c4762a1bSJed Brown requires: triangle 970c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -convergence 971c4762a1bSJed Brown test: 972c4762a1bSJed Brown suffix: p2_2d_1 973c4762a1bSJed Brown requires: triangle 974c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -porder 1 975c4762a1bSJed Brown test: 976c4762a1bSJed Brown suffix: p2_2d_2 977c4762a1bSJed Brown requires: triangle 978c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -porder 2 979c4762a1bSJed Brown test: 980c4762a1bSJed Brown suffix: p2_2d_3 981e788613bSJoe Wallwork requires: triangle mmg 982c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -convergence -conv_refine 0 983c4762a1bSJed Brown test: 984c4762a1bSJed Brown suffix: p2_2d_4 985e788613bSJoe Wallwork requires: triangle mmg 986c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -porder 1 -conv_refine 0 987c4762a1bSJed Brown test: 988c4762a1bSJed Brown suffix: p2_2d_5 989e788613bSJoe Wallwork requires: triangle mmg 990c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -porder 2 -conv_refine 0 991c4762a1bSJed Brown 992c4762a1bSJed Brown # 3D P_2 on a tetrahedron 993c4762a1bSJed Brown test: 994c4762a1bSJed Brown suffix: p2_3d_0 995c4762a1bSJed Brown requires: ctetgen 99630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -convergence 997c4762a1bSJed Brown test: 998c4762a1bSJed Brown suffix: p2_3d_1 999c4762a1bSJed Brown requires: ctetgen 100030602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -porder 1 1001c4762a1bSJed Brown test: 1002c4762a1bSJed Brown suffix: p2_3d_2 1003c4762a1bSJed Brown requires: ctetgen 100430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -porder 2 1005c4762a1bSJed Brown test: 1006c4762a1bSJed Brown suffix: p2_3d_3 1007e788613bSJoe Wallwork requires: ctetgen mmg 100830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -convergence -conv_refine 0 1009c4762a1bSJed Brown test: 1010c4762a1bSJed Brown suffix: p2_3d_4 1011e788613bSJoe Wallwork requires: ctetgen mmg 101230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -porder 1 -conv_refine 0 1013c4762a1bSJed Brown test: 1014c4762a1bSJed Brown suffix: p2_3d_5 1015e788613bSJoe Wallwork requires: ctetgen mmg 101630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -petscspace_degree 2 -qorder 2 -dm_plex_hash_location -porder 2 -conv_refine 0 1017c4762a1bSJed Brown 1018c4762a1bSJed Brown # 2D Q_1 on a quadrilaterial DA 1019c4762a1bSJed Brown test: 1020c4762a1bSJed Brown suffix: q1_2d_da_0 1021c4762a1bSJed Brown requires: mpi_type_get_envelope broken 102230602db0SMatthew G. Knepley args: -use_da 1 -petscspace_degree 1 -qorder 1 -convergence 1023c4762a1bSJed Brown test: 1024c4762a1bSJed Brown suffix: q1_2d_da_1 1025c4762a1bSJed Brown requires: mpi_type_get_envelope broken 102630602db0SMatthew G. Knepley args: -use_da 1 -petscspace_degree 1 -qorder 1 -porder 1 1027c4762a1bSJed Brown test: 1028c4762a1bSJed Brown suffix: q1_2d_da_2 1029c4762a1bSJed Brown requires: mpi_type_get_envelope broken 103030602db0SMatthew G. Knepley args: -use_da 1 -petscspace_degree 1 -qorder 1 -porder 2 1031c4762a1bSJed Brown 1032c4762a1bSJed Brown # 2D Q_1 on a quadrilaterial Plex 1033c4762a1bSJed Brown test: 1034c4762a1bSJed Brown suffix: q1_2d_plex_0 103530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 1 -convergence 1036c4762a1bSJed Brown test: 1037c4762a1bSJed Brown suffix: q1_2d_plex_1 103830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 1 -porder 1 1039c4762a1bSJed Brown test: 1040c4762a1bSJed Brown suffix: q1_2d_plex_2 104130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 1 -porder 2 1042c4762a1bSJed Brown test: 1043c4762a1bSJed Brown suffix: q1_2d_plex_3 104430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 1 -porder 1 -shear_coords 1045c4762a1bSJed Brown test: 1046c4762a1bSJed Brown suffix: q1_2d_plex_4 104730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 1 -porder 2 -shear_coords 1048c4762a1bSJed Brown test: 1049c4762a1bSJed Brown suffix: q1_2d_plex_5 105030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscspace_type tensor -qorder 1 -porder 0 -non_affine_coords -convergence 1051c4762a1bSJed Brown test: 1052c4762a1bSJed Brown suffix: q1_2d_plex_6 105330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscspace_type tensor -qorder 1 -porder 1 -non_affine_coords -convergence 1054c4762a1bSJed Brown test: 1055c4762a1bSJed Brown suffix: q1_2d_plex_7 105630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscspace_type tensor -qorder 1 -porder 2 -non_affine_coords -convergence 1057c4762a1bSJed Brown 1058c4762a1bSJed Brown # 2D Q_2 on a quadrilaterial 1059c4762a1bSJed Brown test: 1060c4762a1bSJed Brown suffix: q2_2d_plex_0 1061c4762a1bSJed Brown requires: mpi_type_get_envelope 106230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -convergence 1063c4762a1bSJed Brown test: 1064c4762a1bSJed Brown suffix: q2_2d_plex_1 1065c4762a1bSJed Brown requires: mpi_type_get_envelope 106630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 1 1067c4762a1bSJed Brown test: 1068c4762a1bSJed Brown suffix: q2_2d_plex_2 1069c4762a1bSJed Brown requires: mpi_type_get_envelope 107030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 2 1071c4762a1bSJed Brown test: 1072c4762a1bSJed Brown suffix: q2_2d_plex_3 107330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 1 -shear_coords 1074c4762a1bSJed Brown test: 1075c4762a1bSJed Brown suffix: q2_2d_plex_4 1076c4762a1bSJed Brown requires: mpi_type_get_envelope 107730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 2 -shear_coords 1078c4762a1bSJed Brown test: 1079c4762a1bSJed Brown suffix: q2_2d_plex_5 1080c4762a1bSJed Brown requires: mpi_type_get_envelope 108130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_type tensor -qorder 2 -porder 0 -non_affine_coords -convergence 1082c4762a1bSJed Brown test: 1083c4762a1bSJed Brown suffix: q2_2d_plex_6 1084c4762a1bSJed Brown requires: mpi_type_get_envelope 108530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_type tensor -qorder 2 -porder 1 -non_affine_coords -convergence 1086c4762a1bSJed Brown test: 1087c4762a1bSJed Brown suffix: q2_2d_plex_7 1088c4762a1bSJed Brown requires: mpi_type_get_envelope 108930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_type tensor -qorder 2 -porder 2 -non_affine_coords -convergence 1090c4762a1bSJed Brown 1091c4762a1bSJed Brown # 2D P_3 on a triangle 1092c4762a1bSJed Brown test: 1093c4762a1bSJed Brown suffix: p3_2d_0 1094c4762a1bSJed Brown requires: triangle !single 1095c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -convergence 1096c4762a1bSJed Brown test: 1097c4762a1bSJed Brown suffix: p3_2d_1 1098c4762a1bSJed Brown requires: triangle !single 1099c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -porder 1 1100c4762a1bSJed Brown test: 1101c4762a1bSJed Brown suffix: p3_2d_2 1102c4762a1bSJed Brown requires: triangle !single 1103c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -porder 2 1104c4762a1bSJed Brown test: 1105c4762a1bSJed Brown suffix: p3_2d_3 1106c4762a1bSJed Brown requires: triangle !single 1107c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -porder 3 1108c4762a1bSJed Brown test: 1109c4762a1bSJed Brown suffix: p3_2d_4 1110e788613bSJoe Wallwork requires: triangle mmg 1111c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -dm_plex_hash_location -convergence -conv_refine 0 1112c4762a1bSJed Brown test: 1113c4762a1bSJed Brown suffix: p3_2d_5 1114e788613bSJoe Wallwork requires: triangle mmg 1115c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -dm_plex_hash_location -porder 1 -conv_refine 0 1116c4762a1bSJed Brown test: 1117c4762a1bSJed Brown suffix: p3_2d_6 1118e788613bSJoe Wallwork requires: triangle mmg 1119c4762a1bSJed Brown args: -petscspace_degree 3 -qorder 3 -dm_plex_hash_location -porder 3 -conv_refine 0 1120c4762a1bSJed Brown 1121c4762a1bSJed Brown # 2D Q_3 on a quadrilaterial 1122c4762a1bSJed Brown test: 1123c4762a1bSJed Brown suffix: q3_2d_0 1124c4762a1bSJed Brown requires: mpi_type_get_envelope !single 112530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 3 -qorder 3 -convergence 1126c4762a1bSJed Brown test: 1127c4762a1bSJed Brown suffix: q3_2d_1 1128c4762a1bSJed Brown requires: mpi_type_get_envelope !single 112930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 3 -qorder 3 -porder 1 1130c4762a1bSJed Brown test: 1131c4762a1bSJed Brown suffix: q3_2d_2 1132c4762a1bSJed Brown requires: mpi_type_get_envelope !single 113330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 3 -qorder 3 -porder 2 1134c4762a1bSJed Brown test: 1135c4762a1bSJed Brown suffix: q3_2d_3 1136c4762a1bSJed Brown requires: mpi_type_get_envelope !single 113730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 3 -qorder 3 -porder 3 1138c4762a1bSJed Brown 1139c4762a1bSJed Brown # 2D P_1disc on a triangle/quadrilateral 1140c4762a1bSJed Brown test: 1141c4762a1bSJed Brown suffix: p1d_2d_0 1142c4762a1bSJed Brown requires: triangle 1143c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -convergence 1144c4762a1bSJed Brown test: 1145c4762a1bSJed Brown suffix: p1d_2d_1 1146c4762a1bSJed Brown requires: triangle 1147c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -porder 1 1148c4762a1bSJed Brown test: 1149c4762a1bSJed Brown suffix: p1d_2d_2 1150c4762a1bSJed Brown requires: triangle 1151c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -porder 2 1152c4762a1bSJed Brown test: 1153c4762a1bSJed Brown suffix: p1d_2d_3 1154c4762a1bSJed Brown requires: triangle 115530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -convergence 1156c4762a1bSJed Brown filter: sed -e "s/convergence rate at refinement 0: 2/convergence rate at refinement 0: 1.9/g" 1157c4762a1bSJed Brown test: 1158c4762a1bSJed Brown suffix: p1d_2d_4 1159c4762a1bSJed Brown requires: triangle 116030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -porder 1 1161c4762a1bSJed Brown test: 1162c4762a1bSJed Brown suffix: p1d_2d_5 1163c4762a1bSJed Brown requires: triangle 116430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -petscdualspace_lagrange_continuity 0 -qorder 1 -porder 2 1165c4762a1bSJed Brown 1166c4762a1bSJed Brown # 2D BDM_1 on a triangle 1167c4762a1bSJed Brown test: 1168c4762a1bSJed Brown suffix: bdm1_2d_0 1169c4762a1bSJed Brown requires: triangle 1170c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 1171c4762a1bSJed Brown -num_comp 2 -qorder 1 -convergence 1172c4762a1bSJed Brown test: 1173c4762a1bSJed Brown suffix: bdm1_2d_1 1174c4762a1bSJed Brown requires: triangle 1175c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 1176c4762a1bSJed Brown -num_comp 2 -qorder 1 -porder 1 1177c4762a1bSJed Brown test: 1178c4762a1bSJed Brown suffix: bdm1_2d_2 1179c4762a1bSJed Brown requires: triangle 1180c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 1181c4762a1bSJed Brown -num_comp 2 -qorder 1 -porder 2 1182c4762a1bSJed Brown 1183c4762a1bSJed Brown # 2D BDM_1 on a quadrilateral 1184c4762a1bSJed Brown test: 1185c4762a1bSJed Brown suffix: bdm1q_2d_0 1186c4762a1bSJed Brown requires: triangle 1187c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 11883f27d899SToby Isaac -petscdualspace_lagrange_tensor 1 \ 118930602db0SMatthew G. Knepley -dm_plex_simplex 0 -num_comp 2 -qorder 1 -convergence 1190c4762a1bSJed Brown test: 1191c4762a1bSJed Brown suffix: bdm1q_2d_1 1192c4762a1bSJed Brown requires: triangle 1193c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 11943f27d899SToby Isaac -petscdualspace_lagrange_tensor 1 \ 119530602db0SMatthew G. Knepley -dm_plex_simplex 0 -num_comp 2 -qorder 1 -porder 1 1196c4762a1bSJed Brown test: 1197c4762a1bSJed Brown suffix: bdm1q_2d_2 1198c4762a1bSJed Brown requires: triangle 1199c4762a1bSJed Brown args: -petscspace_degree 1 -petscdualspace_type bdm \ 12003f27d899SToby Isaac -petscdualspace_lagrange_tensor 1 \ 120130602db0SMatthew G. Knepley -dm_plex_simplex 0 -num_comp 2 -qorder 1 -porder 2 1202c4762a1bSJed Brown 1203c4762a1bSJed Brown # Test high order quadrature 1204c4762a1bSJed Brown test: 1205c4762a1bSJed Brown suffix: p1_quad_2 1206c4762a1bSJed Brown requires: triangle 1207c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 2 -porder 1 1208c4762a1bSJed Brown test: 1209c4762a1bSJed Brown suffix: p1_quad_5 1210c4762a1bSJed Brown requires: triangle 1211c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 5 -porder 1 1212c4762a1bSJed Brown test: 1213c4762a1bSJed Brown suffix: p2_quad_3 1214c4762a1bSJed Brown requires: triangle 1215c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 3 -porder 2 1216c4762a1bSJed Brown test: 1217c4762a1bSJed Brown suffix: p2_quad_5 1218c4762a1bSJed Brown requires: triangle 1219c4762a1bSJed Brown args: -petscspace_degree 2 -qorder 5 -porder 2 1220c4762a1bSJed Brown test: 1221c4762a1bSJed Brown suffix: q1_quad_2 1222c4762a1bSJed Brown requires: mpi_type_get_envelope 122330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 2 -porder 1 1224c4762a1bSJed Brown test: 1225c4762a1bSJed Brown suffix: q1_quad_5 1226c4762a1bSJed Brown requires: mpi_type_get_envelope 122730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 1 -qorder 5 -porder 1 1228c4762a1bSJed Brown test: 1229c4762a1bSJed Brown suffix: q2_quad_3 1230c4762a1bSJed Brown requires: mpi_type_get_envelope 123130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 3 -porder 1 1232c4762a1bSJed Brown test: 1233c4762a1bSJed Brown suffix: q2_quad_5 1234c4762a1bSJed Brown requires: mpi_type_get_envelope 123530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 5 -porder 1 1236c4762a1bSJed Brown 1237c4762a1bSJed Brown # Nonconforming tests 1238c4762a1bSJed Brown test: 1239c4762a1bSJed Brown suffix: constraints 124030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -petscspace_type tensor -petscspace_degree 1 -qorder 0 -constraints 1241c4762a1bSJed Brown test: 1242c4762a1bSJed Brown suffix: nonconforming_tensor_2 1243c4762a1bSJed Brown nsize: 4 124430602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -test_injector -petscpartitioner_type simple -tree -dm_plex_simplex 0 -dm_plex_max_projection_height 1 -petscspace_type tensor -petscspace_degree 2 -qorder 2 -dm_view ascii::ASCII_INFO_DETAIL 1245c4762a1bSJed Brown test: 1246c4762a1bSJed Brown suffix: nonconforming_tensor_3 1247c4762a1bSJed Brown nsize: 4 124830602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -petscpartitioner_type simple -tree -dm_plex_simplex 0 -dm_plex_dim 3 -dm_plex_box_faces 2,2,2 -dm_plex_max_projection_height 2 -petscspace_type tensor -petscspace_degree 1 -qorder 1 -dm_view ascii::ASCII_INFO_DETAIL 1249c4762a1bSJed Brown test: 1250c4762a1bSJed Brown suffix: nonconforming_tensor_2_fv 1251c4762a1bSJed Brown nsize: 4 125230602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fv_grad -test_injector -petsclimiter_type none -petscpartitioner_type simple -tree -dm_plex_simplex 0 -num_comp 2 1253c4762a1bSJed Brown test: 1254c4762a1bSJed Brown suffix: nonconforming_tensor_3_fv 1255c4762a1bSJed Brown nsize: 4 125630602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fv_grad -test_injector -petsclimiter_type none -petscpartitioner_type simple -tree -dm_plex_simplex 0 -dm_plex_dim 3 -dm_plex_box_faces 2,2,2 -num_comp 3 1257c4762a1bSJed Brown test: 1258c4762a1bSJed Brown suffix: nonconforming_tensor_2_hi 1259c4762a1bSJed Brown requires: !single 1260c4762a1bSJed Brown nsize: 4 126130602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -petscpartitioner_type simple -tree -dm_plex_simplex 0 -dm_plex_max_projection_height 1 -petscspace_type tensor -petscspace_degree 4 -qorder 4 1262c4762a1bSJed Brown test: 1263c4762a1bSJed Brown suffix: nonconforming_tensor_3_hi 1264c4762a1bSJed Brown requires: !single skip 1265c4762a1bSJed Brown nsize: 4 126630602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -petscpartitioner_type simple -tree -dm_plex_simplex 0 -dm_plex_dim 3 -dm_plex_box_faces 2,2,2 -dm_plex_max_projection_height 2 -petscspace_type tensor -petscspace_degree 4 -qorder 4 1267c4762a1bSJed Brown test: 1268c4762a1bSJed Brown suffix: nonconforming_simplex_2 1269c4762a1bSJed Brown requires: triangle 1270c4762a1bSJed Brown nsize: 4 127130602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -test_injector -petscpartitioner_type simple -tree -dm_plex_max_projection_height 1 -petscspace_degree 2 -qorder 2 -dm_view ascii::ASCII_INFO_DETAIL 1272c4762a1bSJed Brown test: 1273c4762a1bSJed Brown suffix: nonconforming_simplex_2_hi 1274c4762a1bSJed Brown requires: triangle !single 1275c4762a1bSJed Brown nsize: 4 127630602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -petscpartitioner_type simple -tree -dm_plex_max_projection_height 1 -petscspace_degree 4 -qorder 4 1277c4762a1bSJed Brown test: 1278c4762a1bSJed Brown suffix: nonconforming_simplex_2_fv 1279c4762a1bSJed Brown requires: triangle 1280c4762a1bSJed Brown nsize: 4 128130602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fv_grad -test_injector -petsclimiter_type none -petscpartitioner_type simple -tree -num_comp 2 1282c4762a1bSJed Brown test: 1283c4762a1bSJed Brown suffix: nonconforming_simplex_3 1284c4762a1bSJed Brown requires: ctetgen 1285c4762a1bSJed Brown nsize: 4 128630602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -test_injector -petscpartitioner_type simple -tree -dm_plex_dim 3 -dm_plex_max_projection_height 2 -petscspace_degree 2 -qorder 2 -dm_view ascii::ASCII_INFO_DETAIL 1287c4762a1bSJed Brown test: 1288c4762a1bSJed Brown suffix: nonconforming_simplex_3_hi 1289c4762a1bSJed Brown requires: ctetgen skip 1290c4762a1bSJed Brown nsize: 4 129130602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fe_jacobian -petscpartitioner_type simple -tree -dm_plex_dim 3 -dm_plex_max_projection_height 2 -petscspace_degree 4 -qorder 4 1292c4762a1bSJed Brown test: 1293c4762a1bSJed Brown suffix: nonconforming_simplex_3_fv 1294c4762a1bSJed Brown requires: ctetgen 1295c4762a1bSJed Brown nsize: 4 129630602db0SMatthew G. Knepley args: -dist_dm_distribute -test_fv_grad -test_injector -petsclimiter_type none -petscpartitioner_type simple -tree -dm_plex_dim 3 -num_comp 3 1297c4762a1bSJed Brown 1298c4762a1bSJed Brown TEST*/ 1299c4762a1bSJed Brown 1300c4762a1bSJed Brown /* 1301c4762a1bSJed Brown # 2D Q_2 on a quadrilaterial Plex 1302c4762a1bSJed Brown test: 1303c4762a1bSJed Brown suffix: q2_2d_plex_0 130430602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -convergence 1305c4762a1bSJed Brown test: 1306c4762a1bSJed Brown suffix: q2_2d_plex_1 130730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 1 1308c4762a1bSJed Brown test: 1309c4762a1bSJed Brown suffix: q2_2d_plex_2 131030602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 2 1311c4762a1bSJed Brown test: 1312c4762a1bSJed Brown suffix: q2_2d_plex_3 131330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 1 -shear_coords 1314c4762a1bSJed Brown test: 1315c4762a1bSJed Brown suffix: q2_2d_plex_4 131630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -qorder 2 -porder 2 -shear_coords 1317c4762a1bSJed Brown test: 1318c4762a1bSJed Brown suffix: q2_2d_plex_5 131930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_poly_tensor 1 -qorder 2 -porder 0 -non_affine_coords 1320c4762a1bSJed Brown test: 1321c4762a1bSJed Brown suffix: q2_2d_plex_6 132230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_poly_tensor 1 -qorder 2 -porder 1 -non_affine_coords 1323c4762a1bSJed Brown test: 1324c4762a1bSJed Brown suffix: q2_2d_plex_7 132530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -petscspace_degree 2 -petscspace_poly_tensor 1 -qorder 2 -porder 2 -non_affine_coords 1326c4762a1bSJed Brown 1327c4762a1bSJed Brown test: 1328c4762a1bSJed Brown suffix: p1d_2d_6 1329e788613bSJoe Wallwork requires: mmg 1330c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -convergence -conv_refine 0 1331c4762a1bSJed Brown test: 1332c4762a1bSJed Brown suffix: p1d_2d_7 1333e788613bSJoe Wallwork requires: mmg 1334c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 1 -conv_refine 0 1335c4762a1bSJed Brown test: 1336c4762a1bSJed Brown suffix: p1d_2d_8 1337e788613bSJoe Wallwork requires: mmg 1338c4762a1bSJed Brown args: -petscspace_degree 1 -qorder 1 -dm_plex_hash_location -porder 2 -conv_refine 0 1339c4762a1bSJed Brown */ 1340