1c4762a1bSJed Brown static char help[] = "Test that shared points on interface of partitions can be rebalanced.\n\n"; 2c4762a1bSJed Brown static char FILENAME[] = "ex31.c"; 3c4762a1bSJed Brown 4c4762a1bSJed Brown #include <petscdmplex.h> 5c4762a1bSJed Brown #include <petscviewerhdf5.h> 630602db0SMatthew G. Knepley #include <petscsf.h> 7c4762a1bSJed Brown 8c4762a1bSJed Brown typedef struct { 9c4762a1bSJed Brown PetscBool parallel; /* Use ParMetis or Metis */ 10c4762a1bSJed Brown PetscBool useInitialGuess; /* Only active when in parallel, uses RefineKway of ParMetis */ 11c4762a1bSJed Brown PetscInt entityDepth; /* depth of the entities to rebalance ( 0 => vertices) */ 12c4762a1bSJed Brown } AppCtx; 13c4762a1bSJed Brown 14c4762a1bSJed Brown static PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 15c4762a1bSJed Brown { 16c4762a1bSJed Brown PetscErrorCode ierr; 17c4762a1bSJed Brown 18c4762a1bSJed Brown PetscFunctionBegin; 19c4762a1bSJed Brown options->parallel = PETSC_FALSE; 20c4762a1bSJed Brown options->useInitialGuess = PETSC_FALSE; 21c4762a1bSJed Brown options->entityDepth = 0; 2230602db0SMatthew G. Knepley 23c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Meshing Interpolation Test Options", "DMPLEX");CHKERRQ(ierr); 24*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBoundedInt("-entity_depth", "Depth of the entities to rebalance (0 => vertices)", FILENAME, options->entityDepth, &options->entityDepth, NULL,0)); 25*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-parallel", "Use ParMetis instead of Metis", FILENAME, options->parallel, &options->parallel, NULL)); 26*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscOptionsBool("-use_initial_guess", "Use RefineKway function of ParMetis", FILENAME, options->useInitialGuess, &options->useInitialGuess, NULL)); 271e1ea65dSPierre Jolivet ierr = PetscOptionsEnd();CHKERRQ(ierr); 28c4762a1bSJed Brown PetscFunctionReturn(0); 29c4762a1bSJed Brown } 30c4762a1bSJed Brown 31c4762a1bSJed Brown static PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 32c4762a1bSJed Brown { 33c4762a1bSJed Brown PetscFunctionBegin; 34*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMCreate(comm, dm)); 35*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetType(*dm, DMPLEX)); 36*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMSetFromOptions(*dm)); 37*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMViewFromOptions(*dm, NULL, "-dm_view")); 38c4762a1bSJed Brown PetscFunctionReturn(0); 39c4762a1bSJed Brown } 40c4762a1bSJed Brown 41c4762a1bSJed Brown int main(int argc, char **argv) 42c4762a1bSJed Brown { 43c4762a1bSJed Brown MPI_Comm comm; 44c4762a1bSJed Brown DM dm, dmdist; 45c4762a1bSJed Brown PetscPartitioner part; 46c4762a1bSJed Brown AppCtx user; 47c4762a1bSJed Brown IS is=NULL; 48c4762a1bSJed Brown PetscSection s=NULL, gsection=NULL; 49c4762a1bSJed Brown PetscErrorCode ierr; 50c4762a1bSJed Brown PetscMPIInt size; 51c4762a1bSJed Brown PetscSF sf; 52c4762a1bSJed Brown PetscInt pStart, pEnd, p, minBefore, maxBefore, minAfter, maxAfter, gSizeBefore, gSizeAfter; 53c4762a1bSJed Brown PetscBool success; 54c4762a1bSJed Brown 55c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; 56c4762a1bSJed Brown comm = PETSC_COMM_WORLD; 57*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Comm_size(comm, &size)); 58*5f80ce2aSJacob Faibussowitsch CHKERRQ(ProcessOptions(comm, &user)); 59*5f80ce2aSJacob Faibussowitsch CHKERRQ(CreateMesh(comm, &user, &dm)); 60c4762a1bSJed Brown 61c4762a1bSJed Brown /* partition dm using PETSCPARTITIONERPARMETIS */ 62*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetPartitioner(dm, &part)); 63*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscObjectSetOptionsPrefix((PetscObject)part,"p_")); 64*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPartitionerSetType(part, PETSCPARTITIONERPARMETIS)); 65*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPartitionerSetFromOptions(part)); 66*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionCreate(comm, &s)); 67*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscPartitionerDMPlexPartition(part, dm, NULL, s, &is)); 68c4762a1bSJed Brown 69*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexDistribute(dm, 0, NULL, &dmdist)); 70c4762a1bSJed Brown if (dmdist) { 71*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(&dm)); 72c4762a1bSJed Brown dm = dmdist; 73c4762a1bSJed Brown } 74c4762a1bSJed Brown 75c4762a1bSJed Brown /* cleanup */ 76*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionDestroy(&s)); 77*5f80ce2aSJacob Faibussowitsch CHKERRQ(ISDestroy(&is)); 78c4762a1bSJed Brown 79c4762a1bSJed Brown /* We make a PetscSection with a DOF on every mesh entity of depth 80c4762a1bSJed Brown * user.entityDepth, then make a global section and look at its storage size. 81c4762a1bSJed Brown * We do the same thing after the rebalancing and then assert that the size 82c4762a1bSJed Brown * remains the same. We also make sure that the balance has improved at least 83c4762a1bSJed Brown * a little bit compared to the initial decomposition. */ 84c4762a1bSJed Brown 85c4762a1bSJed Brown if (size>1) { 86*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionCreate(comm, &s)); 87*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetNumFields(s, 1)); 88*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetFieldComponents(s, 0, 1)); 89*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexGetDepthStratum(dm, user.entityDepth, &pStart, &pEnd)); 90*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetChart(s, pStart, pEnd)); 91c4762a1bSJed Brown for (p = pStart; p < pEnd; ++p) { 92*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetDof(s, p, 1)); 93*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetFieldDof(s, p, 0, 1)); 94c4762a1bSJed Brown } 95*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionSetUp(s)); 96*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMGetPointSF(dm, &sf)); 97*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionCreateGlobalSection(s, sf, PETSC_FALSE, PETSC_FALSE, &gsection)); 98*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionGetStorageSize(gsection, &gSizeBefore)); 99c4762a1bSJed Brown minBefore = gSizeBefore; 100c4762a1bSJed Brown maxBefore = gSizeBefore; 101*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &gSizeBefore, 1, MPIU_INT, MPI_SUM, comm)); 102*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &minBefore, 1, MPIU_INT, MPI_MIN, comm)); 103*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &maxBefore, 1, MPIU_INT, MPI_MAX, comm)); 104*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionDestroy(&gsection)); 105c4762a1bSJed Brown } 106c4762a1bSJed Brown 107*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMPlexRebalanceSharedPoints(dm, user.entityDepth, user.useInitialGuess, user.parallel, &success)); 108c4762a1bSJed Brown 109c4762a1bSJed Brown if (size>1) { 110*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionCreateGlobalSection(s, sf, PETSC_FALSE, PETSC_FALSE, &gsection)); 111*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionGetStorageSize(gsection, &gSizeAfter)); 112c4762a1bSJed Brown minAfter = gSizeAfter; 113c4762a1bSJed Brown maxAfter = gSizeAfter; 114*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &gSizeAfter, 1, MPIU_INT, MPI_SUM, comm)); 115*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &minAfter, 1, MPIU_INT, MPI_MIN, comm)); 116*5f80ce2aSJacob Faibussowitsch CHKERRMPI(MPI_Allreduce(MPI_IN_PLACE, &maxAfter, 1, MPIU_INT, MPI_MAX, comm)); 1172c71b3e2SJacob Faibussowitsch PetscCheckFalse(gSizeAfter != gSizeBefore,comm, PETSC_ERR_PLIB, "Global section has not the same size before and after."); 1182c71b3e2SJacob Faibussowitsch PetscCheckFalse(!(minAfter >= minBefore && maxAfter <= maxBefore && (minAfter > minBefore || maxAfter < maxBefore)),comm, PETSC_ERR_PLIB, "DMPlexRebalanceSharedPoints did not improve mesh point balance."); 119*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionDestroy(&gsection)); 120*5f80ce2aSJacob Faibussowitsch CHKERRQ(PetscSectionDestroy(&s)); 121c4762a1bSJed Brown } 122c4762a1bSJed Brown 123*5f80ce2aSJacob Faibussowitsch CHKERRQ(DMDestroy(&dm)); 124c4762a1bSJed Brown ierr = PetscFinalize(); 125c4762a1bSJed Brown return ierr; 126c4762a1bSJed Brown } 127c4762a1bSJed Brown 128c4762a1bSJed Brown /*TEST 129c4762a1bSJed Brown 13030602db0SMatthew G. Knepley testset: 13130602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 13230602db0SMatthew G. Knepley 133c4762a1bSJed Brown test: 134c4762a1bSJed Brown # rebalance a mesh 135c4762a1bSJed Brown suffix: 0 136c4762a1bSJed Brown nsize: {{2 3 4}} 137c4762a1bSJed Brown requires: parmetis 13830602db0SMatthew G. Knepley args: -dm_plex_box_faces {{2,3,4 5,4,3 7,11,5}} -entity_depth {{0 1}} -parallel {{FALSE TRUE}} -use_initial_guess FALSE 139c4762a1bSJed Brown 140c4762a1bSJed Brown test: 141c4762a1bSJed Brown # rebalance a mesh but use the initial guess (uses a random algorithm and gives different results on different machines, so just check that it runs). 142c4762a1bSJed Brown suffix: 1 143c4762a1bSJed Brown nsize: {{2 3 4}} 144c4762a1bSJed Brown requires: parmetis 14530602db0SMatthew G. Knepley args: -dm_plex_box_faces {{2,3,4 5,4,3 7,11,5}} -entity_depth {{0 1}} -parallel TRUE -use_initial_guess TRUE 146c4762a1bSJed Brown 147c4762a1bSJed Brown test: 148c4762a1bSJed Brown # no-op in serial 149c4762a1bSJed Brown suffix: 2 150c4762a1bSJed Brown nsize: {{1}} 151c4762a1bSJed Brown requires: parmetis 15230602db0SMatthew G. Knepley args: -dm_plex_box_faces 2,3,4 -entity_depth 0 -parallel FALSE -use_initial_guess FALSE 153c4762a1bSJed Brown 154c4762a1bSJed Brown TEST*/ 155