15fdea053SToby Isaac #include <petscdm.h> 2c58f1c22SToby Isaac #include <petsc/private/dmlabelimpl.h> /*I "petscdmlabel.h" I*/ 3ea844a1aSMatthew Knepley #include <petsc/private/sectionimpl.h> /*I "petscsection.h" I*/ 4c58f1c22SToby Isaac #include <petscsf.h> 5ea844a1aSMatthew Knepley #include <petscsection.h> 6c58f1c22SToby Isaac 7c58f1c22SToby Isaac /*@C 8c58f1c22SToby Isaac DMLabelCreate - Create a DMLabel object, which is a multimap 9c58f1c22SToby Isaac 105b5e7992SMatthew G. Knepley Collective 115b5e7992SMatthew G. Knepley 12d67d17b1SMatthew G. Knepley Input parameters: 13d67d17b1SMatthew G. Knepley + comm - The communicator, usually PETSC_COMM_SELF 14d67d17b1SMatthew G. Knepley - name - The label name 15c58f1c22SToby Isaac 16c58f1c22SToby Isaac Output parameter: 17c58f1c22SToby Isaac . label - The DMLabel 18c58f1c22SToby Isaac 19c58f1c22SToby Isaac Level: beginner 20c58f1c22SToby Isaac 2105ab7a9fSVaclav Hapla Notes: 2205ab7a9fSVaclav Hapla The label name is actually usual PetscObject name. 2305ab7a9fSVaclav Hapla One can get/set it with PetscObjectGetName()/PetscObjectSetName(). 2405ab7a9fSVaclav Hapla 25c58f1c22SToby Isaac .seealso: DMLabelDestroy() 26c58f1c22SToby Isaac @*/ 27d67d17b1SMatthew G. Knepley PetscErrorCode DMLabelCreate(MPI_Comm comm, const char name[], DMLabel *label) 28c58f1c22SToby Isaac { 29c58f1c22SToby Isaac PetscErrorCode ierr; 30c58f1c22SToby Isaac 31c58f1c22SToby Isaac PetscFunctionBegin; 32064a246eSJacob Faibussowitsch PetscValidPointer(label,3); 33d67d17b1SMatthew G. Knepley ierr = DMInitializePackage();CHKERRQ(ierr); 34c58f1c22SToby Isaac 35d67d17b1SMatthew G. Knepley ierr = PetscHeaderCreate(*label,DMLABEL_CLASSID,"DMLabel","DMLabel","DM",comm,DMLabelDestroy,DMLabelView);CHKERRQ(ierr); 36d67d17b1SMatthew G. Knepley 37c58f1c22SToby Isaac (*label)->numStrata = 0; 385aa44df4SToby Isaac (*label)->defaultValue = -1; 39c58f1c22SToby Isaac (*label)->stratumValues = NULL; 40ad8374ffSToby Isaac (*label)->validIS = NULL; 41c58f1c22SToby Isaac (*label)->stratumSizes = NULL; 42c58f1c22SToby Isaac (*label)->points = NULL; 43c58f1c22SToby Isaac (*label)->ht = NULL; 44c58f1c22SToby Isaac (*label)->pStart = -1; 45c58f1c22SToby Isaac (*label)->pEnd = -1; 46c58f1c22SToby Isaac (*label)->bt = NULL; 47b9907514SLisandro Dalcin ierr = PetscHMapICreate(&(*label)->hmap);CHKERRQ(ierr); 48d67d17b1SMatthew G. Knepley ierr = PetscObjectSetName((PetscObject) *label, name);CHKERRQ(ierr); 49c58f1c22SToby Isaac PetscFunctionReturn(0); 50c58f1c22SToby Isaac } 51c58f1c22SToby Isaac 52c58f1c22SToby Isaac /* 53c58f1c22SToby Isaac DMLabelMakeValid_Private - Transfer stratum data from the hash format to the sorted list format 54c58f1c22SToby Isaac 555b5e7992SMatthew G. Knepley Not collective 565b5e7992SMatthew G. Knepley 57c58f1c22SToby Isaac Input parameter: 58c58f1c22SToby Isaac + label - The DMLabel 59c58f1c22SToby Isaac - v - The stratum value 60c58f1c22SToby Isaac 61c58f1c22SToby Isaac Output parameter: 62c58f1c22SToby Isaac . label - The DMLabel with stratum in sorted list format 63c58f1c22SToby Isaac 64c58f1c22SToby Isaac Level: developer 65c58f1c22SToby Isaac 66c58f1c22SToby Isaac .seealso: DMLabelCreate() 67c58f1c22SToby Isaac */ 68c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeValid_Private(DMLabel label, PetscInt v) 69c58f1c22SToby Isaac { 70277ea44aSLisandro Dalcin IS is; 71b9907514SLisandro Dalcin PetscInt off = 0, *pointArray, p; 72c58f1c22SToby Isaac PetscErrorCode ierr; 73c58f1c22SToby Isaac 74b9907514SLisandro Dalcin if (PetscLikely(v >= 0 && v < label->numStrata) && label->validIS[v]) return 0; 75c58f1c22SToby Isaac PetscFunctionBegin; 760c3c4a36SLisandro Dalcin if (v < 0 || v >= label->numStrata) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %D in DMLabelMakeValid_Private\n", v); 77e8f14785SLisandro Dalcin ierr = PetscHSetIGetSize(label->ht[v], &label->stratumSizes[v]);CHKERRQ(ierr); 78ad8374ffSToby Isaac ierr = PetscMalloc1(label->stratumSizes[v], &pointArray);CHKERRQ(ierr); 79e8f14785SLisandro Dalcin ierr = PetscHSetIGetElems(label->ht[v], &off, pointArray);CHKERRQ(ierr); 80b9907514SLisandro Dalcin ierr = PetscHSetIClear(label->ht[v]);CHKERRQ(ierr); 81ad8374ffSToby Isaac ierr = PetscSortInt(label->stratumSizes[v], pointArray);CHKERRQ(ierr); 82c58f1c22SToby Isaac if (label->bt) { 83c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 84ad8374ffSToby Isaac const PetscInt point = pointArray[p]; 85c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 86c58f1c22SToby Isaac ierr = PetscBTSet(label->bt, point - label->pStart);CHKERRQ(ierr); 87c58f1c22SToby Isaac } 88c58f1c22SToby Isaac } 89ba2698f1SMatthew G. Knepley if (label->stratumSizes[v] > 0 && pointArray[label->stratumSizes[v]-1] == pointArray[0] + label->stratumSizes[v]-1) { 90ba2698f1SMatthew G. Knepley ierr = ISCreateStride(PETSC_COMM_SELF, label->stratumSizes[v], pointArray[0], 1, &is);CHKERRQ(ierr); 91ba2698f1SMatthew G. Knepley ierr = PetscFree(pointArray);CHKERRQ(ierr); 92ba2698f1SMatthew G. Knepley } else { 93277ea44aSLisandro Dalcin ierr = ISCreateGeneral(PETSC_COMM_SELF, label->stratumSizes[v], pointArray, PETSC_OWN_POINTER, &is);CHKERRQ(ierr); 94ba2698f1SMatthew G. Knepley } 95277ea44aSLisandro Dalcin ierr = PetscObjectSetName((PetscObject) is, "indices");CHKERRQ(ierr); 96277ea44aSLisandro Dalcin label->points[v] = is; 97ad8374ffSToby Isaac label->validIS[v] = PETSC_TRUE; 98d67d17b1SMatthew G. Knepley ierr = PetscObjectStateIncrease((PetscObject) label);CHKERRQ(ierr); 99c58f1c22SToby Isaac PetscFunctionReturn(0); 100c58f1c22SToby Isaac } 101c58f1c22SToby Isaac 102c58f1c22SToby Isaac /* 103c58f1c22SToby Isaac DMLabelMakeAllValid_Private - Transfer all strata from the hash format to the sorted list format 104c58f1c22SToby Isaac 1055b5e7992SMatthew G. Knepley Not collective 1065b5e7992SMatthew G. Knepley 107c58f1c22SToby Isaac Input parameter: 108c58f1c22SToby Isaac . label - The DMLabel 109c58f1c22SToby Isaac 110c58f1c22SToby Isaac Output parameter: 111c58f1c22SToby Isaac . label - The DMLabel with all strata in sorted list format 112c58f1c22SToby Isaac 113c58f1c22SToby Isaac Level: developer 114c58f1c22SToby Isaac 115c58f1c22SToby Isaac .seealso: DMLabelCreate() 116c58f1c22SToby Isaac */ 117c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeAllValid_Private(DMLabel label) 118c58f1c22SToby Isaac { 119c58f1c22SToby Isaac PetscInt v; 120c58f1c22SToby Isaac PetscErrorCode ierr; 121c58f1c22SToby Isaac 122c58f1c22SToby Isaac PetscFunctionBegin; 123c58f1c22SToby Isaac for (v = 0; v < label->numStrata; v++) { 124c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 125c58f1c22SToby Isaac } 126c58f1c22SToby Isaac PetscFunctionReturn(0); 127c58f1c22SToby Isaac } 128c58f1c22SToby Isaac 129c58f1c22SToby Isaac /* 130c58f1c22SToby Isaac DMLabelMakeInvalid_Private - Transfer stratum data from the sorted list format to the hash format 131c58f1c22SToby Isaac 1325b5e7992SMatthew G. Knepley Not collective 1335b5e7992SMatthew G. Knepley 134c58f1c22SToby Isaac Input parameter: 135c58f1c22SToby Isaac + label - The DMLabel 136c58f1c22SToby Isaac - v - The stratum value 137c58f1c22SToby Isaac 138c58f1c22SToby Isaac Output parameter: 139c58f1c22SToby Isaac . label - The DMLabel with stratum in hash format 140c58f1c22SToby Isaac 141c58f1c22SToby Isaac Level: developer 142c58f1c22SToby Isaac 143c58f1c22SToby Isaac .seealso: DMLabelCreate() 144c58f1c22SToby Isaac */ 145c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeInvalid_Private(DMLabel label, PetscInt v) 146c58f1c22SToby Isaac { 147c58f1c22SToby Isaac PetscInt p; 148ad8374ffSToby Isaac const PetscInt *points; 149c58f1c22SToby Isaac PetscErrorCode ierr; 150c58f1c22SToby Isaac 151b9907514SLisandro Dalcin if (PetscLikely(v >= 0 && v < label->numStrata) && !label->validIS[v]) return 0; 152c58f1c22SToby Isaac PetscFunctionBegin; 1530c3c4a36SLisandro Dalcin if (v < 0 || v >= label->numStrata) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %D in DMLabelMakeInvalid_Private\n", v); 154ad8374ffSToby Isaac if (label->points[v]) { 155ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 156e8f14785SLisandro Dalcin for (p = 0; p < label->stratumSizes[v]; ++p) { 157e8f14785SLisandro Dalcin ierr = PetscHSetIAdd(label->ht[v], points[p]);CHKERRQ(ierr); 158e8f14785SLisandro Dalcin } 159ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 160ad8374ffSToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 161ad8374ffSToby Isaac } 162ad8374ffSToby Isaac label->validIS[v] = PETSC_FALSE; 163c58f1c22SToby Isaac PetscFunctionReturn(0); 164c58f1c22SToby Isaac } 165c58f1c22SToby Isaac 166b9907514SLisandro Dalcin #if !defined(DMLABEL_LOOKUP_THRESHOLD) 167b9907514SLisandro Dalcin #define DMLABEL_LOOKUP_THRESHOLD 16 168b9907514SLisandro Dalcin #endif 169b9907514SLisandro Dalcin 1700c3c4a36SLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode DMLabelLookupStratum(DMLabel label, PetscInt value, PetscInt *index) 1710c3c4a36SLisandro Dalcin { 1720c3c4a36SLisandro Dalcin PetscInt v; 173b9907514SLisandro Dalcin PetscErrorCode ierr; 1740e79e033SBarry Smith 1750c3c4a36SLisandro Dalcin PetscFunctionBegin; 1760e79e033SBarry Smith *index = -1; 177b9907514SLisandro Dalcin if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD) { 178b9907514SLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 179b9907514SLisandro Dalcin if (label->stratumValues[v] == value) {*index = v; break;} 180b9907514SLisandro Dalcin } else { 181b9907514SLisandro Dalcin ierr = PetscHMapIGet(label->hmap, value, index);CHKERRQ(ierr); 1820e79e033SBarry Smith } 18376bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { /* Check strata hash map consistency */ 18490e9b2aeSLisandro Dalcin PetscInt len, loc = -1; 18590e9b2aeSLisandro Dalcin ierr = PetscHMapIGetSize(label->hmap, &len);CHKERRQ(ierr); 18690e9b2aeSLisandro Dalcin if (len != label->numStrata) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map size"); 18790e9b2aeSLisandro Dalcin if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD) { 18890e9b2aeSLisandro Dalcin ierr = PetscHMapIGet(label->hmap, value, &loc);CHKERRQ(ierr); 18990e9b2aeSLisandro Dalcin } else { 19090e9b2aeSLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 19190e9b2aeSLisandro Dalcin if (label->stratumValues[v] == value) {loc = v; break;} 19290e9b2aeSLisandro Dalcin } 19390e9b2aeSLisandro Dalcin if (loc != *index) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map lookup"); 19490e9b2aeSLisandro Dalcin } 1950c3c4a36SLisandro Dalcin PetscFunctionReturn(0); 1960c3c4a36SLisandro Dalcin } 1970c3c4a36SLisandro Dalcin 198b9907514SLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode DMLabelNewStratum(DMLabel label, PetscInt value, PetscInt *index) 199c58f1c22SToby Isaac { 200b9907514SLisandro Dalcin PetscInt v; 201b9907514SLisandro Dalcin PetscInt *tmpV; 202b9907514SLisandro Dalcin PetscInt *tmpS; 203b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 204b9907514SLisandro Dalcin IS *tmpP, is; 205c58f1c22SToby Isaac PetscBool *tmpB; 206b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 207c58f1c22SToby Isaac PetscErrorCode ierr; 208c58f1c22SToby Isaac 209c58f1c22SToby Isaac PetscFunctionBegin; 210b9907514SLisandro Dalcin v = label->numStrata; 211b9907514SLisandro Dalcin tmpV = label->stratumValues; 212b9907514SLisandro Dalcin tmpS = label->stratumSizes; 213b9907514SLisandro Dalcin tmpH = label->ht; 214b9907514SLisandro Dalcin tmpP = label->points; 215b9907514SLisandro Dalcin tmpB = label->validIS; 2168e1f8cf0SLisandro Dalcin { /* TODO: PetscRealloc() is broken, use malloc+memcpy+free */ 2178e1f8cf0SLisandro Dalcin PetscInt *oldV = tmpV; 2188e1f8cf0SLisandro Dalcin PetscInt *oldS = tmpS; 2198e1f8cf0SLisandro Dalcin PetscHSetI *oldH = tmpH; 2208e1f8cf0SLisandro Dalcin IS *oldP = tmpP; 2218e1f8cf0SLisandro Dalcin PetscBool *oldB = tmpB; 2228e1f8cf0SLisandro Dalcin ierr = PetscMalloc((v+1)*sizeof(*tmpV), &tmpV);CHKERRQ(ierr); 2238e1f8cf0SLisandro Dalcin ierr = PetscMalloc((v+1)*sizeof(*tmpS), &tmpS);CHKERRQ(ierr); 2248e1f8cf0SLisandro Dalcin ierr = PetscMalloc((v+1)*sizeof(*tmpH), &tmpH);CHKERRQ(ierr); 2258e1f8cf0SLisandro Dalcin ierr = PetscMalloc((v+1)*sizeof(*tmpP), &tmpP);CHKERRQ(ierr); 2268e1f8cf0SLisandro Dalcin ierr = PetscMalloc((v+1)*sizeof(*tmpB), &tmpB);CHKERRQ(ierr); 227580bdb30SBarry Smith ierr = PetscArraycpy(tmpV, oldV, v);CHKERRQ(ierr); 228580bdb30SBarry Smith ierr = PetscArraycpy(tmpS, oldS, v);CHKERRQ(ierr); 229580bdb30SBarry Smith ierr = PetscArraycpy(tmpH, oldH, v);CHKERRQ(ierr); 230580bdb30SBarry Smith ierr = PetscArraycpy(tmpP, oldP, v);CHKERRQ(ierr); 231580bdb30SBarry Smith ierr = PetscArraycpy(tmpB, oldB, v);CHKERRQ(ierr); 2328e1f8cf0SLisandro Dalcin ierr = PetscFree(oldV);CHKERRQ(ierr); 2338e1f8cf0SLisandro Dalcin ierr = PetscFree(oldS);CHKERRQ(ierr); 2348e1f8cf0SLisandro Dalcin ierr = PetscFree(oldH);CHKERRQ(ierr); 2358e1f8cf0SLisandro Dalcin ierr = PetscFree(oldP);CHKERRQ(ierr); 2368e1f8cf0SLisandro Dalcin ierr = PetscFree(oldB);CHKERRQ(ierr); 2378e1f8cf0SLisandro Dalcin } 238b9907514SLisandro Dalcin label->numStrata = v+1; 239c58f1c22SToby Isaac label->stratumValues = tmpV; 240c58f1c22SToby Isaac label->stratumSizes = tmpS; 241c58f1c22SToby Isaac label->ht = tmpH; 242c58f1c22SToby Isaac label->points = tmpP; 243ad8374ffSToby Isaac label->validIS = tmpB; 244b9907514SLisandro Dalcin ierr = PetscHSetICreate(&ht);CHKERRQ(ierr); 245b9907514SLisandro Dalcin ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is);CHKERRQ(ierr); 246b9907514SLisandro Dalcin ierr = PetscHMapISet(hmap, value, v);CHKERRQ(ierr); 247b9907514SLisandro Dalcin tmpV[v] = value; 248b9907514SLisandro Dalcin tmpS[v] = 0; 249b9907514SLisandro Dalcin tmpH[v] = ht; 250b9907514SLisandro Dalcin tmpP[v] = is; 251b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 252277ea44aSLisandro Dalcin ierr = PetscObjectStateIncrease((PetscObject) label);CHKERRQ(ierr); 2530c3c4a36SLisandro Dalcin *index = v; 2540c3c4a36SLisandro Dalcin PetscFunctionReturn(0); 2550c3c4a36SLisandro Dalcin } 2560c3c4a36SLisandro Dalcin 257b9907514SLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode DMLabelLookupAddStratum(DMLabel label, PetscInt value, PetscInt *index) 258b9907514SLisandro Dalcin { 259b9907514SLisandro Dalcin PetscErrorCode ierr; 260b9907514SLisandro Dalcin PetscFunctionBegin; 261b9907514SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, index);CHKERRQ(ierr); 262b9907514SLisandro Dalcin if (*index < 0) {ierr = DMLabelNewStratum(label, value, index);CHKERRQ(ierr);} 263b9907514SLisandro Dalcin PetscFunctionReturn(0); 264b9907514SLisandro Dalcin } 265b9907514SLisandro Dalcin 2669e63cc69SVaclav Hapla PETSC_STATIC_INLINE PetscErrorCode DMLabelGetStratumSize_Private(DMLabel label, PetscInt v, PetscInt *size) 2679e63cc69SVaclav Hapla { 2689e63cc69SVaclav Hapla PetscErrorCode ierr; 2699e63cc69SVaclav Hapla 2709e63cc69SVaclav Hapla PetscFunctionBegin; 2719e63cc69SVaclav Hapla *size = 0; 2729e63cc69SVaclav Hapla if (v < 0) PetscFunctionReturn(0); 2739e63cc69SVaclav Hapla if (label->validIS[v]) { 2749e63cc69SVaclav Hapla *size = label->stratumSizes[v]; 2759e63cc69SVaclav Hapla } else { 2769e63cc69SVaclav Hapla ierr = PetscHSetIGetSize(label->ht[v], size);CHKERRQ(ierr); 2779e63cc69SVaclav Hapla } 2789e63cc69SVaclav Hapla PetscFunctionReturn(0); 2799e63cc69SVaclav Hapla } 2809e63cc69SVaclav Hapla 281b9907514SLisandro Dalcin /*@ 282b9907514SLisandro Dalcin DMLabelAddStratum - Adds a new stratum value in a DMLabel 283b9907514SLisandro Dalcin 284d8d19677SJose E. Roman Input Parameters: 285b9907514SLisandro Dalcin + label - The DMLabel 286b9907514SLisandro Dalcin - value - The stratum value 287b9907514SLisandro Dalcin 288b9907514SLisandro Dalcin Level: beginner 289b9907514SLisandro Dalcin 290b9907514SLisandro Dalcin .seealso: DMLabelCreate(), DMLabelDestroy() 291b9907514SLisandro Dalcin @*/ 2920c3c4a36SLisandro Dalcin PetscErrorCode DMLabelAddStratum(DMLabel label, PetscInt value) 2930c3c4a36SLisandro Dalcin { 2940c3c4a36SLisandro Dalcin PetscInt v; 2950c3c4a36SLisandro Dalcin PetscErrorCode ierr; 2960c3c4a36SLisandro Dalcin 2970c3c4a36SLisandro Dalcin PetscFunctionBegin; 298d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 299b9907514SLisandro Dalcin ierr = DMLabelLookupAddStratum(label, value, &v);CHKERRQ(ierr); 300b9907514SLisandro Dalcin PetscFunctionReturn(0); 301b9907514SLisandro Dalcin } 302b9907514SLisandro Dalcin 303b9907514SLisandro Dalcin /*@ 304b9907514SLisandro Dalcin DMLabelAddStrata - Adds new stratum values in a DMLabel 305b9907514SLisandro Dalcin 3065b5e7992SMatthew G. Knepley Not collective 3075b5e7992SMatthew G. Knepley 308d8d19677SJose E. Roman Input Parameters: 309b9907514SLisandro Dalcin + label - The DMLabel 310b9907514SLisandro Dalcin . numStrata - The number of stratum values 311b9907514SLisandro Dalcin - stratumValues - The stratum values 312b9907514SLisandro Dalcin 313b9907514SLisandro Dalcin Level: beginner 314b9907514SLisandro Dalcin 315b9907514SLisandro Dalcin .seealso: DMLabelCreate(), DMLabelDestroy() 316b9907514SLisandro Dalcin @*/ 317b9907514SLisandro Dalcin PetscErrorCode DMLabelAddStrata(DMLabel label, PetscInt numStrata, const PetscInt stratumValues[]) 318b9907514SLisandro Dalcin { 319b9907514SLisandro Dalcin PetscInt *values, v; 320b9907514SLisandro Dalcin PetscErrorCode ierr; 321b9907514SLisandro Dalcin 322b9907514SLisandro Dalcin PetscFunctionBegin; 323b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 324b9907514SLisandro Dalcin if (numStrata) PetscValidIntPointer(stratumValues, 3); 325b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &values);CHKERRQ(ierr); 326580bdb30SBarry Smith ierr = PetscArraycpy(values, stratumValues, numStrata);CHKERRQ(ierr); 327b9907514SLisandro Dalcin ierr = PetscSortRemoveDupsInt(&numStrata, values);CHKERRQ(ierr); 328b9907514SLisandro Dalcin if (!label->numStrata) { /* Fast preallocation */ 329b9907514SLisandro Dalcin PetscInt *tmpV; 330b9907514SLisandro Dalcin PetscInt *tmpS; 331b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 332b9907514SLisandro Dalcin IS *tmpP, is; 333b9907514SLisandro Dalcin PetscBool *tmpB; 334b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 335b9907514SLisandro Dalcin 336b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &tmpV);CHKERRQ(ierr); 337b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &tmpS);CHKERRQ(ierr); 338b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &tmpH);CHKERRQ(ierr); 339b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &tmpP);CHKERRQ(ierr); 340b9907514SLisandro Dalcin ierr = PetscMalloc1(numStrata, &tmpB);CHKERRQ(ierr); 341b9907514SLisandro Dalcin label->numStrata = numStrata; 342b9907514SLisandro Dalcin label->stratumValues = tmpV; 343b9907514SLisandro Dalcin label->stratumSizes = tmpS; 344b9907514SLisandro Dalcin label->ht = tmpH; 345b9907514SLisandro Dalcin label->points = tmpP; 346b9907514SLisandro Dalcin label->validIS = tmpB; 347b9907514SLisandro Dalcin for (v = 0; v < numStrata; ++v) { 348b9907514SLisandro Dalcin ierr = PetscHSetICreate(&ht);CHKERRQ(ierr); 349b9907514SLisandro Dalcin ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is);CHKERRQ(ierr); 350b9907514SLisandro Dalcin ierr = PetscHMapISet(hmap, values[v], v);CHKERRQ(ierr); 351b9907514SLisandro Dalcin tmpV[v] = values[v]; 352b9907514SLisandro Dalcin tmpS[v] = 0; 353b9907514SLisandro Dalcin tmpH[v] = ht; 354b9907514SLisandro Dalcin tmpP[v] = is; 355b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 356b9907514SLisandro Dalcin } 357277ea44aSLisandro Dalcin ierr = PetscObjectStateIncrease((PetscObject) label);CHKERRQ(ierr); 358b9907514SLisandro Dalcin } else { 359b9907514SLisandro Dalcin for (v = 0; v < numStrata; ++v) { 360b9907514SLisandro Dalcin ierr = DMLabelAddStratum(label, values[v]);CHKERRQ(ierr); 361b9907514SLisandro Dalcin } 362b9907514SLisandro Dalcin } 363b9907514SLisandro Dalcin ierr = PetscFree(values);CHKERRQ(ierr); 364b9907514SLisandro Dalcin PetscFunctionReturn(0); 365b9907514SLisandro Dalcin } 366b9907514SLisandro Dalcin 367b9907514SLisandro Dalcin /*@ 368b9907514SLisandro Dalcin DMLabelAddStrataIS - Adds new stratum values in a DMLabel 369b9907514SLisandro Dalcin 3705b5e7992SMatthew G. Knepley Not collective 3715b5e7992SMatthew G. Knepley 372d8d19677SJose E. Roman Input Parameters: 373b9907514SLisandro Dalcin + label - The DMLabel 374b9907514SLisandro Dalcin - valueIS - Index set with stratum values 375b9907514SLisandro Dalcin 376b9907514SLisandro Dalcin Level: beginner 377b9907514SLisandro Dalcin 378b9907514SLisandro Dalcin .seealso: DMLabelCreate(), DMLabelDestroy() 379b9907514SLisandro Dalcin @*/ 380b9907514SLisandro Dalcin PetscErrorCode DMLabelAddStrataIS(DMLabel label, IS valueIS) 381b9907514SLisandro Dalcin { 382b9907514SLisandro Dalcin PetscInt numStrata; 383b9907514SLisandro Dalcin const PetscInt *stratumValues; 384b9907514SLisandro Dalcin PetscErrorCode ierr; 385b9907514SLisandro Dalcin 386b9907514SLisandro Dalcin PetscFunctionBegin; 387b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 388b9907514SLisandro Dalcin PetscValidHeaderSpecific(valueIS, IS_CLASSID, 2); 389b9907514SLisandro Dalcin ierr = ISGetLocalSize(valueIS, &numStrata);CHKERRQ(ierr); 390b9907514SLisandro Dalcin ierr = ISGetIndices(valueIS, &stratumValues);CHKERRQ(ierr); 391b9907514SLisandro Dalcin ierr = DMLabelAddStrata(label, numStrata, stratumValues);CHKERRQ(ierr); 392c58f1c22SToby Isaac PetscFunctionReturn(0); 393c58f1c22SToby Isaac } 394c58f1c22SToby Isaac 395c58f1c22SToby Isaac static PetscErrorCode DMLabelView_Ascii(DMLabel label, PetscViewer viewer) 396c58f1c22SToby Isaac { 397c58f1c22SToby Isaac PetscInt v; 398c58f1c22SToby Isaac PetscMPIInt rank; 399c58f1c22SToby Isaac PetscErrorCode ierr; 400c58f1c22SToby Isaac 401c58f1c22SToby Isaac PetscFunctionBegin; 402ffc4695bSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank);CHKERRMPI(ierr); 403c58f1c22SToby Isaac ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 404c58f1c22SToby Isaac if (label) { 405d67d17b1SMatthew G. Knepley const char *name; 406d67d17b1SMatthew G. Knepley 407d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) label, &name);CHKERRQ(ierr); 408d67d17b1SMatthew G. Knepley ierr = PetscViewerASCIIPrintf(viewer, "Label '%s':\n", name);CHKERRQ(ierr); 409c58f1c22SToby Isaac if (label->bt) {ierr = PetscViewerASCIIPrintf(viewer, " Index has been calculated in [%D, %D)\n", label->pStart, label->pEnd);CHKERRQ(ierr);} 410c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 411c58f1c22SToby Isaac const PetscInt value = label->stratumValues[v]; 412ad8374ffSToby Isaac const PetscInt *points; 413c58f1c22SToby Isaac PetscInt p; 414c58f1c22SToby Isaac 415ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 416c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 417ad8374ffSToby Isaac ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %D (%D)\n", rank, points[p], value);CHKERRQ(ierr); 418c58f1c22SToby Isaac } 419ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 420c58f1c22SToby Isaac } 421c58f1c22SToby Isaac } 422c58f1c22SToby Isaac ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 423c58f1c22SToby Isaac ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 424c58f1c22SToby Isaac PetscFunctionReturn(0); 425c58f1c22SToby Isaac } 426c58f1c22SToby Isaac 427c58f1c22SToby Isaac /*@C 428c58f1c22SToby Isaac DMLabelView - View the label 429c58f1c22SToby Isaac 4305b5e7992SMatthew G. Knepley Collective on viewer 4315b5e7992SMatthew G. Knepley 432c58f1c22SToby Isaac Input Parameters: 433c58f1c22SToby Isaac + label - The DMLabel 434c58f1c22SToby Isaac - viewer - The PetscViewer 435c58f1c22SToby Isaac 436c58f1c22SToby Isaac Level: intermediate 437c58f1c22SToby Isaac 438c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelDestroy() 439c58f1c22SToby Isaac @*/ 440c58f1c22SToby Isaac PetscErrorCode DMLabelView(DMLabel label, PetscViewer viewer) 441c58f1c22SToby Isaac { 442c58f1c22SToby Isaac PetscBool iascii; 443c58f1c22SToby Isaac PetscErrorCode ierr; 444c58f1c22SToby Isaac 445c58f1c22SToby Isaac PetscFunctionBegin; 446d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 447b9907514SLisandro Dalcin if (!viewer) {ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)label), &viewer);CHKERRQ(ierr);} 448c58f1c22SToby Isaac PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 449c58f1c22SToby Isaac if (label) {ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr);} 450c58f1c22SToby Isaac ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii);CHKERRQ(ierr); 451c58f1c22SToby Isaac if (iascii) { 452c58f1c22SToby Isaac ierr = DMLabelView_Ascii(label, viewer);CHKERRQ(ierr); 453c58f1c22SToby Isaac } 454c58f1c22SToby Isaac PetscFunctionReturn(0); 455c58f1c22SToby Isaac } 456c58f1c22SToby Isaac 45784f0b6dfSMatthew G. Knepley /*@ 458d67d17b1SMatthew G. Knepley DMLabelReset - Destroys internal data structures in a DMLabel 459d67d17b1SMatthew G. Knepley 4605b5e7992SMatthew G. Knepley Not collective 4615b5e7992SMatthew G. Knepley 462d67d17b1SMatthew G. Knepley Input Parameter: 463d67d17b1SMatthew G. Knepley . label - The DMLabel 464d67d17b1SMatthew G. Knepley 465d67d17b1SMatthew G. Knepley Level: beginner 466d67d17b1SMatthew G. Knepley 467d67d17b1SMatthew G. Knepley .seealso: DMLabelDestroy(), DMLabelCreate() 468d67d17b1SMatthew G. Knepley @*/ 469d67d17b1SMatthew G. Knepley PetscErrorCode DMLabelReset(DMLabel label) 470d67d17b1SMatthew G. Knepley { 471d67d17b1SMatthew G. Knepley PetscInt v; 472d67d17b1SMatthew G. Knepley PetscErrorCode ierr; 473d67d17b1SMatthew G. Knepley 474d67d17b1SMatthew G. Knepley PetscFunctionBegin; 475d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 476d67d17b1SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 477d67d17b1SMatthew G. Knepley ierr = PetscHSetIDestroy(&label->ht[v]);CHKERRQ(ierr); 478d67d17b1SMatthew G. Knepley ierr = ISDestroy(&label->points[v]);CHKERRQ(ierr); 479d67d17b1SMatthew G. Knepley } 480b9907514SLisandro Dalcin label->numStrata = 0; 481b9907514SLisandro Dalcin ierr = PetscFree(label->stratumValues);CHKERRQ(ierr); 482b9907514SLisandro Dalcin ierr = PetscFree(label->stratumSizes);CHKERRQ(ierr); 483d67d17b1SMatthew G. Knepley ierr = PetscFree(label->ht);CHKERRQ(ierr); 484d67d17b1SMatthew G. Knepley ierr = PetscFree(label->points);CHKERRQ(ierr); 485d67d17b1SMatthew G. Knepley ierr = PetscFree(label->validIS);CHKERRQ(ierr); 486f9244615SMatthew G. Knepley label->stratumValues = NULL; 487f9244615SMatthew G. Knepley label->stratumSizes = NULL; 488f9244615SMatthew G. Knepley label->ht = NULL; 489f9244615SMatthew G. Knepley label->points = NULL; 490f9244615SMatthew G. Knepley label->validIS = NULL; 491b9907514SLisandro Dalcin ierr = PetscHMapIReset(label->hmap);CHKERRQ(ierr); 492b9907514SLisandro Dalcin label->pStart = -1; 493b9907514SLisandro Dalcin label->pEnd = -1; 494d67d17b1SMatthew G. Knepley ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr); 495d67d17b1SMatthew G. Knepley PetscFunctionReturn(0); 496d67d17b1SMatthew G. Knepley } 497d67d17b1SMatthew G. Knepley 498d67d17b1SMatthew G. Knepley /*@ 49984f0b6dfSMatthew G. Knepley DMLabelDestroy - Destroys a DMLabel 50084f0b6dfSMatthew G. Knepley 5015b5e7992SMatthew G. Knepley Collective on label 5025b5e7992SMatthew G. Knepley 50384f0b6dfSMatthew G. Knepley Input Parameter: 50484f0b6dfSMatthew G. Knepley . label - The DMLabel 50584f0b6dfSMatthew G. Knepley 50684f0b6dfSMatthew G. Knepley Level: beginner 50784f0b6dfSMatthew G. Knepley 508d67d17b1SMatthew G. Knepley .seealso: DMLabelReset(), DMLabelCreate() 50984f0b6dfSMatthew G. Knepley @*/ 510c58f1c22SToby Isaac PetscErrorCode DMLabelDestroy(DMLabel *label) 511c58f1c22SToby Isaac { 512c58f1c22SToby Isaac PetscErrorCode ierr; 513c58f1c22SToby Isaac 514c58f1c22SToby Isaac PetscFunctionBegin; 515d67d17b1SMatthew G. Knepley if (!*label) PetscFunctionReturn(0); 516d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific((*label),DMLABEL_CLASSID,1); 517b9907514SLisandro Dalcin if (--((PetscObject)(*label))->refct > 0) {*label = NULL; PetscFunctionReturn(0);} 518d67d17b1SMatthew G. Knepley ierr = DMLabelReset(*label);CHKERRQ(ierr); 519b9907514SLisandro Dalcin ierr = PetscHMapIDestroy(&(*label)->hmap);CHKERRQ(ierr); 520d67d17b1SMatthew G. Knepley ierr = PetscHeaderDestroy(label);CHKERRQ(ierr); 521c58f1c22SToby Isaac PetscFunctionReturn(0); 522c58f1c22SToby Isaac } 523c58f1c22SToby Isaac 52484f0b6dfSMatthew G. Knepley /*@ 52584f0b6dfSMatthew G. Knepley DMLabelDuplicate - Duplicates a DMLabel 52684f0b6dfSMatthew G. Knepley 5275b5e7992SMatthew G. Knepley Collective on label 5285b5e7992SMatthew G. Knepley 52984f0b6dfSMatthew G. Knepley Input Parameter: 53084f0b6dfSMatthew G. Knepley . label - The DMLabel 53184f0b6dfSMatthew G. Knepley 53284f0b6dfSMatthew G. Knepley Output Parameter: 53384f0b6dfSMatthew G. Knepley . labelnew - location to put new vector 53484f0b6dfSMatthew G. Knepley 53584f0b6dfSMatthew G. Knepley Level: intermediate 53684f0b6dfSMatthew G. Knepley 53784f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelDestroy() 53884f0b6dfSMatthew G. Knepley @*/ 539c58f1c22SToby Isaac PetscErrorCode DMLabelDuplicate(DMLabel label, DMLabel *labelnew) 540c58f1c22SToby Isaac { 541d67d17b1SMatthew G. Knepley const char *name; 542ad8374ffSToby Isaac PetscInt v; 543c58f1c22SToby Isaac PetscErrorCode ierr; 544c58f1c22SToby Isaac 545c58f1c22SToby Isaac PetscFunctionBegin; 546d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 547c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 548d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) label, &name);CHKERRQ(ierr); 549d67d17b1SMatthew G. Knepley ierr = DMLabelCreate(PetscObjectComm((PetscObject) label), name, labelnew);CHKERRQ(ierr); 550c58f1c22SToby Isaac 551c58f1c22SToby Isaac (*labelnew)->numStrata = label->numStrata; 5525aa44df4SToby Isaac (*labelnew)->defaultValue = label->defaultValue; 553c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->stratumValues);CHKERRQ(ierr); 554c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->stratumSizes);CHKERRQ(ierr); 555c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->ht);CHKERRQ(ierr); 556c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->points);CHKERRQ(ierr); 557ad8374ffSToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->validIS);CHKERRQ(ierr); 558c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 559e8f14785SLisandro Dalcin ierr = PetscHSetICreate(&(*labelnew)->ht[v]);CHKERRQ(ierr); 560c58f1c22SToby Isaac (*labelnew)->stratumValues[v] = label->stratumValues[v]; 561c58f1c22SToby Isaac (*labelnew)->stratumSizes[v] = label->stratumSizes[v]; 562ad8374ffSToby Isaac ierr = PetscObjectReference((PetscObject) (label->points[v]));CHKERRQ(ierr); 563ad8374ffSToby Isaac (*labelnew)->points[v] = label->points[v]; 564b9907514SLisandro Dalcin (*labelnew)->validIS[v] = PETSC_TRUE; 565c58f1c22SToby Isaac } 566f14fe40dSLisandro Dalcin ierr = PetscHMapIDestroy(&(*labelnew)->hmap);CHKERRQ(ierr); 567b9907514SLisandro Dalcin ierr = PetscHMapIDuplicate(label->hmap,&(*labelnew)->hmap);CHKERRQ(ierr); 568c58f1c22SToby Isaac (*labelnew)->pStart = -1; 569c58f1c22SToby Isaac (*labelnew)->pEnd = -1; 570c58f1c22SToby Isaac (*labelnew)->bt = NULL; 571c58f1c22SToby Isaac PetscFunctionReturn(0); 572c58f1c22SToby Isaac } 573c58f1c22SToby Isaac 574c6a43d28SMatthew G. Knepley /*@ 575c6a43d28SMatthew G. Knepley DMLabelComputeIndex - Create an index structure for membership determination, automatically determining the bounds 576c6a43d28SMatthew G. Knepley 5775b5e7992SMatthew G. Knepley Not collective 5785b5e7992SMatthew G. Knepley 579c6a43d28SMatthew G. Knepley Input Parameter: 580c6a43d28SMatthew G. Knepley . label - The DMLabel 581c6a43d28SMatthew G. Knepley 582c6a43d28SMatthew G. Knepley Level: intermediate 583c6a43d28SMatthew G. Knepley 584c6a43d28SMatthew G. Knepley .seealso: DMLabelHasPoint(), DMLabelCreateIndex(), DMLabelDestroyIndex(), DMLabelGetValue(), DMLabelSetValue() 585c6a43d28SMatthew G. Knepley @*/ 586c6a43d28SMatthew G. Knepley PetscErrorCode DMLabelComputeIndex(DMLabel label) 587c6a43d28SMatthew G. Knepley { 588c6a43d28SMatthew G. Knepley PetscInt pStart = PETSC_MAX_INT, pEnd = -1, v; 589c6a43d28SMatthew G. Knepley PetscErrorCode ierr; 590c6a43d28SMatthew G. Knepley 591c6a43d28SMatthew G. Knepley PetscFunctionBegin; 592c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 593c6a43d28SMatthew G. Knepley ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 594c6a43d28SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 595c6a43d28SMatthew G. Knepley const PetscInt *points; 596c6a43d28SMatthew G. Knepley PetscInt i; 597c6a43d28SMatthew G. Knepley 598c6a43d28SMatthew G. Knepley ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 599c6a43d28SMatthew G. Knepley for (i = 0; i < label->stratumSizes[v]; ++i) { 600c6a43d28SMatthew G. Knepley const PetscInt point = points[i]; 601c6a43d28SMatthew G. Knepley 602c6a43d28SMatthew G. Knepley pStart = PetscMin(point, pStart); 603c6a43d28SMatthew G. Knepley pEnd = PetscMax(point+1, pEnd); 604c6a43d28SMatthew G. Knepley } 605c6a43d28SMatthew G. Knepley ierr = ISRestoreIndices(label->points[v], &points);CHKERRQ(ierr); 606c6a43d28SMatthew G. Knepley } 607c6a43d28SMatthew G. Knepley label->pStart = pStart == PETSC_MAX_INT ? -1 : pStart; 608c6a43d28SMatthew G. Knepley label->pEnd = pEnd; 609c6a43d28SMatthew G. Knepley ierr = DMLabelCreateIndex(label, label->pStart, label->pEnd);CHKERRQ(ierr); 610c6a43d28SMatthew G. Knepley PetscFunctionReturn(0); 611c6a43d28SMatthew G. Knepley } 612c6a43d28SMatthew G. Knepley 613c6a43d28SMatthew G. Knepley /*@ 614c6a43d28SMatthew G. Knepley DMLabelCreateIndex - Create an index structure for membership determination 615c6a43d28SMatthew G. Knepley 6165b5e7992SMatthew G. Knepley Not collective 6175b5e7992SMatthew G. Knepley 618c6a43d28SMatthew G. Knepley Input Parameters: 619c6a43d28SMatthew G. Knepley + label - The DMLabel 620c6a43d28SMatthew G. Knepley . pStart - The smallest point 621c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 622c6a43d28SMatthew G. Knepley 623c6a43d28SMatthew G. Knepley Level: intermediate 624c6a43d28SMatthew G. Knepley 625c6a43d28SMatthew G. Knepley .seealso: DMLabelHasPoint(), DMLabelComputeIndex(), DMLabelDestroyIndex(), DMLabelGetValue(), DMLabelSetValue() 626c6a43d28SMatthew G. Knepley @*/ 627c58f1c22SToby Isaac PetscErrorCode DMLabelCreateIndex(DMLabel label, PetscInt pStart, PetscInt pEnd) 628c58f1c22SToby Isaac { 629c58f1c22SToby Isaac PetscInt v; 630c58f1c22SToby Isaac PetscErrorCode ierr; 631c58f1c22SToby Isaac 632c58f1c22SToby Isaac PetscFunctionBegin; 633d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 6340c3c4a36SLisandro Dalcin ierr = DMLabelDestroyIndex(label);CHKERRQ(ierr); 635c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 636c58f1c22SToby Isaac label->pStart = pStart; 637c58f1c22SToby Isaac label->pEnd = pEnd; 638c6a43d28SMatthew G. Knepley /* This can be hooked into SetValue(), ClearValue(), etc. for updating */ 639c58f1c22SToby Isaac ierr = PetscBTCreate(pEnd - pStart, &label->bt);CHKERRQ(ierr); 640c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 641ad8374ffSToby Isaac const PetscInt *points; 642c58f1c22SToby Isaac PetscInt i; 643c58f1c22SToby Isaac 644ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 645c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 646ad8374ffSToby Isaac const PetscInt point = points[i]; 647c58f1c22SToby Isaac 648c58f1c22SToby Isaac if ((point < pStart) || (point >= pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, pStart, pEnd); 649c58f1c22SToby Isaac ierr = PetscBTSet(label->bt, point - pStart);CHKERRQ(ierr); 650c58f1c22SToby Isaac } 651ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v], &points);CHKERRQ(ierr); 652c58f1c22SToby Isaac } 653c58f1c22SToby Isaac PetscFunctionReturn(0); 654c58f1c22SToby Isaac } 655c58f1c22SToby Isaac 656c6a43d28SMatthew G. Knepley /*@ 657c6a43d28SMatthew G. Knepley DMLabelDestroyIndex - Destroy the index structure 658c6a43d28SMatthew G. Knepley 6595b5e7992SMatthew G. Knepley Not collective 6605b5e7992SMatthew G. Knepley 661c6a43d28SMatthew G. Knepley Input Parameter: 662c6a43d28SMatthew G. Knepley . label - the DMLabel 663c6a43d28SMatthew G. Knepley 664c6a43d28SMatthew G. Knepley Level: intermediate 665c6a43d28SMatthew G. Knepley 666c6a43d28SMatthew G. Knepley .seealso: DMLabelHasPoint(), DMLabelCreateIndex(), DMLabelGetValue(), DMLabelSetValue() 667c6a43d28SMatthew G. Knepley @*/ 668c58f1c22SToby Isaac PetscErrorCode DMLabelDestroyIndex(DMLabel label) 669c58f1c22SToby Isaac { 670c58f1c22SToby Isaac PetscErrorCode ierr; 671c58f1c22SToby Isaac 672c58f1c22SToby Isaac PetscFunctionBegin; 673d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 674c58f1c22SToby Isaac label->pStart = -1; 675c58f1c22SToby Isaac label->pEnd = -1; 6760c3c4a36SLisandro Dalcin ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr); 677c58f1c22SToby Isaac PetscFunctionReturn(0); 678c58f1c22SToby Isaac } 679c58f1c22SToby Isaac 680c58f1c22SToby Isaac /*@ 681c6a43d28SMatthew G. Knepley DMLabelGetBounds - Return the smallest and largest point in the label 682c6a43d28SMatthew G. Knepley 6835b5e7992SMatthew G. Knepley Not collective 6845b5e7992SMatthew G. Knepley 685c6a43d28SMatthew G. Knepley Input Parameter: 686c6a43d28SMatthew G. Knepley . label - the DMLabel 687c6a43d28SMatthew G. Knepley 688c6a43d28SMatthew G. Knepley Output Parameters: 689c6a43d28SMatthew G. Knepley + pStart - The smallest point 690c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 691c6a43d28SMatthew G. Knepley 692c6a43d28SMatthew G. Knepley Note: This will compute an index for the label if one does not exist. 693c6a43d28SMatthew G. Knepley 694c6a43d28SMatthew G. Knepley Level: intermediate 695c6a43d28SMatthew G. Knepley 696c6a43d28SMatthew G. Knepley .seealso: DMLabelHasPoint(), DMLabelCreateIndex(), DMLabelGetValue(), DMLabelSetValue() 697c6a43d28SMatthew G. Knepley @*/ 698c6a43d28SMatthew G. Knepley PetscErrorCode DMLabelGetBounds(DMLabel label, PetscInt *pStart, PetscInt *pEnd) 699c6a43d28SMatthew G. Knepley { 700c6a43d28SMatthew G. Knepley PetscErrorCode ierr; 701c6a43d28SMatthew G. Knepley 702c6a43d28SMatthew G. Knepley PetscFunctionBegin; 703c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 704c6a43d28SMatthew G. Knepley if ((label->pStart == -1) && (label->pEnd == -1)) {ierr = DMLabelComputeIndex(label);CHKERRQ(ierr);} 705c6a43d28SMatthew G. Knepley if (pStart) { 706534a8f05SLisandro Dalcin PetscValidIntPointer(pStart, 2); 707c6a43d28SMatthew G. Knepley *pStart = label->pStart; 708c6a43d28SMatthew G. Knepley } 709c6a43d28SMatthew G. Knepley if (pEnd) { 710534a8f05SLisandro Dalcin PetscValidIntPointer(pEnd, 3); 711c6a43d28SMatthew G. Knepley *pEnd = label->pEnd; 712c6a43d28SMatthew G. Knepley } 713c6a43d28SMatthew G. Knepley PetscFunctionReturn(0); 714c6a43d28SMatthew G. Knepley } 715c6a43d28SMatthew G. Knepley 716c6a43d28SMatthew G. Knepley /*@ 717c58f1c22SToby Isaac DMLabelHasValue - Determine whether a label assigns the value to any point 718c58f1c22SToby Isaac 7195b5e7992SMatthew G. Knepley Not collective 7205b5e7992SMatthew G. Knepley 721c58f1c22SToby Isaac Input Parameters: 722c58f1c22SToby Isaac + label - the DMLabel 723c58f1c22SToby Isaac - value - the value 724c58f1c22SToby Isaac 725c58f1c22SToby Isaac Output Parameter: 726c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this value to any point 727c58f1c22SToby Isaac 728c58f1c22SToby Isaac Level: developer 729c58f1c22SToby Isaac 730c58f1c22SToby Isaac .seealso: DMLabelHasPoint(), DMLabelGetValue(), DMLabelSetValue() 731c58f1c22SToby Isaac @*/ 732c58f1c22SToby Isaac PetscErrorCode DMLabelHasValue(DMLabel label, PetscInt value, PetscBool *contains) 733c58f1c22SToby Isaac { 734c58f1c22SToby Isaac PetscInt v; 7350c3c4a36SLisandro Dalcin PetscErrorCode ierr; 736c58f1c22SToby Isaac 737c58f1c22SToby Isaac PetscFunctionBegin; 738d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 739534a8f05SLisandro Dalcin PetscValidBoolPointer(contains, 3); 7400c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 7410c3c4a36SLisandro Dalcin *contains = v < 0 ? PETSC_FALSE : PETSC_TRUE; 742c58f1c22SToby Isaac PetscFunctionReturn(0); 743c58f1c22SToby Isaac } 744c58f1c22SToby Isaac 745c58f1c22SToby Isaac /*@ 746c58f1c22SToby Isaac DMLabelHasPoint - Determine whether a label assigns a value to a point 747c58f1c22SToby Isaac 7485b5e7992SMatthew G. Knepley Not collective 7495b5e7992SMatthew G. Knepley 750c58f1c22SToby Isaac Input Parameters: 751c58f1c22SToby Isaac + label - the DMLabel 752c58f1c22SToby Isaac - point - the point 753c58f1c22SToby Isaac 754c58f1c22SToby Isaac Output Parameter: 755c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this point to a value 756c58f1c22SToby Isaac 757c58f1c22SToby Isaac Note: The user must call DMLabelCreateIndex() before this function. 758c58f1c22SToby Isaac 759c58f1c22SToby Isaac Level: developer 760c58f1c22SToby Isaac 761c58f1c22SToby Isaac .seealso: DMLabelCreateIndex(), DMLabelGetValue(), DMLabelSetValue() 762c58f1c22SToby Isaac @*/ 763c58f1c22SToby Isaac PetscErrorCode DMLabelHasPoint(DMLabel label, PetscInt point, PetscBool *contains) 764c58f1c22SToby Isaac { 765c58f1c22SToby Isaac PetscErrorCode ierr; 766c58f1c22SToby Isaac 767c58f1c22SToby Isaac PetscFunctionBeginHot; 768d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 769534a8f05SLisandro Dalcin PetscValidBoolPointer(contains, 3); 770c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 77176bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { 772c58f1c22SToby Isaac if (!label->bt) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call DMLabelCreateIndex() before DMLabelHasPoint()"); 773c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 77476bd3646SJed Brown } 775c58f1c22SToby Isaac *contains = PetscBTLookup(label->bt, point - label->pStart) ? PETSC_TRUE : PETSC_FALSE; 776c58f1c22SToby Isaac PetscFunctionReturn(0); 777c58f1c22SToby Isaac } 778c58f1c22SToby Isaac 779c58f1c22SToby Isaac /*@ 780c58f1c22SToby Isaac DMLabelStratumHasPoint - Return true if the stratum contains a point 781c58f1c22SToby Isaac 7825b5e7992SMatthew G. Knepley Not collective 7835b5e7992SMatthew G. Knepley 784c58f1c22SToby Isaac Input Parameters: 785c58f1c22SToby Isaac + label - the DMLabel 786c58f1c22SToby Isaac . value - the stratum value 787c58f1c22SToby Isaac - point - the point 788c58f1c22SToby Isaac 789c58f1c22SToby Isaac Output Parameter: 790c58f1c22SToby Isaac . contains - true if the stratum contains the point 791c58f1c22SToby Isaac 792c58f1c22SToby Isaac Level: intermediate 793c58f1c22SToby Isaac 794c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelSetValue(), DMLabelClearValue() 795c58f1c22SToby Isaac @*/ 796c58f1c22SToby Isaac PetscErrorCode DMLabelStratumHasPoint(DMLabel label, PetscInt value, PetscInt point, PetscBool *contains) 797c58f1c22SToby Isaac { 798c58f1c22SToby Isaac PetscInt v; 799c58f1c22SToby Isaac PetscErrorCode ierr; 800c58f1c22SToby Isaac 8010c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 802d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 803534a8f05SLisandro Dalcin PetscValidBoolPointer(contains, 4); 804c58f1c22SToby Isaac *contains = PETSC_FALSE; 8050c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 8060c3c4a36SLisandro Dalcin if (v < 0) PetscFunctionReturn(0); 8070c3c4a36SLisandro Dalcin 808ad8374ffSToby Isaac if (label->validIS[v]) { 809c58f1c22SToby Isaac PetscInt i; 810c58f1c22SToby Isaac 811a2d74346SToby Isaac ierr = ISLocate(label->points[v], point, &i);CHKERRQ(ierr); 8120c3c4a36SLisandro Dalcin if (i >= 0) *contains = PETSC_TRUE; 813c58f1c22SToby Isaac } else { 814c58f1c22SToby Isaac PetscBool has; 815c58f1c22SToby Isaac 816b9907514SLisandro Dalcin ierr = PetscHSetIHas(label->ht[v], point, &has);CHKERRQ(ierr); 8170c3c4a36SLisandro Dalcin if (has) *contains = PETSC_TRUE; 818c58f1c22SToby Isaac } 819c58f1c22SToby Isaac PetscFunctionReturn(0); 820c58f1c22SToby Isaac } 821c58f1c22SToby Isaac 82284f0b6dfSMatthew G. Knepley /*@ 8235aa44df4SToby Isaac DMLabelGetDefaultValue - Get the default value returned by DMLabelGetValue() if a point has not been explicitly given a value. 8245aa44df4SToby Isaac When a label is created, it is initialized to -1. 8255aa44df4SToby Isaac 8265b5e7992SMatthew G. Knepley Not collective 8275b5e7992SMatthew G. Knepley 8285aa44df4SToby Isaac Input parameter: 8295aa44df4SToby Isaac . label - a DMLabel object 8305aa44df4SToby Isaac 8315aa44df4SToby Isaac Output parameter: 8325aa44df4SToby Isaac . defaultValue - the default value 8335aa44df4SToby Isaac 8345aa44df4SToby Isaac Level: beginner 8355aa44df4SToby Isaac 8365aa44df4SToby Isaac .seealso: DMLabelSetDefaultValue(), DMLabelGetValue(), DMLabelSetValue() 83784f0b6dfSMatthew G. Knepley @*/ 8385aa44df4SToby Isaac PetscErrorCode DMLabelGetDefaultValue(DMLabel label, PetscInt *defaultValue) 8395aa44df4SToby Isaac { 8405aa44df4SToby Isaac PetscFunctionBegin; 841d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8425aa44df4SToby Isaac *defaultValue = label->defaultValue; 8435aa44df4SToby Isaac PetscFunctionReturn(0); 8445aa44df4SToby Isaac } 8455aa44df4SToby Isaac 84684f0b6dfSMatthew G. Knepley /*@ 8475aa44df4SToby Isaac DMLabelSetDefaultValue - Set the default value returned by DMLabelGetValue() if a point has not been explicitly given a value. 8485aa44df4SToby Isaac When a label is created, it is initialized to -1. 8495aa44df4SToby Isaac 8505b5e7992SMatthew G. Knepley Not collective 8515b5e7992SMatthew G. Knepley 8525aa44df4SToby Isaac Input parameter: 8535aa44df4SToby Isaac . label - a DMLabel object 8545aa44df4SToby Isaac 8555aa44df4SToby Isaac Output parameter: 8565aa44df4SToby Isaac . defaultValue - the default value 8575aa44df4SToby Isaac 8585aa44df4SToby Isaac Level: beginner 8595aa44df4SToby Isaac 8605aa44df4SToby Isaac .seealso: DMLabelGetDefaultValue(), DMLabelGetValue(), DMLabelSetValue() 86184f0b6dfSMatthew G. Knepley @*/ 8625aa44df4SToby Isaac PetscErrorCode DMLabelSetDefaultValue(DMLabel label, PetscInt defaultValue) 8635aa44df4SToby Isaac { 8645aa44df4SToby Isaac PetscFunctionBegin; 865d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8665aa44df4SToby Isaac label->defaultValue = defaultValue; 8675aa44df4SToby Isaac PetscFunctionReturn(0); 8685aa44df4SToby Isaac } 8695aa44df4SToby Isaac 870c58f1c22SToby Isaac /*@ 8715aa44df4SToby Isaac DMLabelGetValue - Return the value a label assigns to a point, or the label's default value (which is initially -1, and can be changed with DMLabelSetDefaultValue()) 872c58f1c22SToby Isaac 8735b5e7992SMatthew G. Knepley Not collective 8745b5e7992SMatthew G. Knepley 875c58f1c22SToby Isaac Input Parameters: 876c58f1c22SToby Isaac + label - the DMLabel 877c58f1c22SToby Isaac - point - the point 878c58f1c22SToby Isaac 879c58f1c22SToby Isaac Output Parameter: 8808e68afcfSMatthew G. Knepley . value - The point value, or the default value (-1 by default) 881c58f1c22SToby Isaac 882c58f1c22SToby Isaac Level: intermediate 883c58f1c22SToby Isaac 8845aa44df4SToby Isaac .seealso: DMLabelCreate(), DMLabelSetValue(), DMLabelClearValue(), DMLabelGetDefaultValue(), DMLabelSetDefaultValue() 885c58f1c22SToby Isaac @*/ 886c58f1c22SToby Isaac PetscErrorCode DMLabelGetValue(DMLabel label, PetscInt point, PetscInt *value) 887c58f1c22SToby Isaac { 888c58f1c22SToby Isaac PetscInt v; 889c58f1c22SToby Isaac PetscErrorCode ierr; 890c58f1c22SToby Isaac 8910c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 892d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 893c58f1c22SToby Isaac PetscValidPointer(value, 3); 8945aa44df4SToby Isaac *value = label->defaultValue; 895c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 896ad8374ffSToby Isaac if (label->validIS[v]) { 897c58f1c22SToby Isaac PetscInt i; 898c58f1c22SToby Isaac 899a2d74346SToby Isaac ierr = ISLocate(label->points[v], point, &i);CHKERRQ(ierr); 900c58f1c22SToby Isaac if (i >= 0) { 901c58f1c22SToby Isaac *value = label->stratumValues[v]; 902c58f1c22SToby Isaac break; 903c58f1c22SToby Isaac } 904c58f1c22SToby Isaac } else { 905c58f1c22SToby Isaac PetscBool has; 906c58f1c22SToby Isaac 907b9907514SLisandro Dalcin ierr = PetscHSetIHas(label->ht[v], point, &has);CHKERRQ(ierr); 908c58f1c22SToby Isaac if (has) { 909c58f1c22SToby Isaac *value = label->stratumValues[v]; 910c58f1c22SToby Isaac break; 911c58f1c22SToby Isaac } 912c58f1c22SToby Isaac } 913c58f1c22SToby Isaac } 914c58f1c22SToby Isaac PetscFunctionReturn(0); 915c58f1c22SToby Isaac } 916c58f1c22SToby Isaac 917c58f1c22SToby Isaac /*@ 918367003a6SStefano Zampini DMLabelSetValue - Set the value a label assigns to a point. If the value is the same as the label's default value (which is initially -1, and can be changed with DMLabelSetDefaultValue() to something different), then this function will do nothing. 919c58f1c22SToby Isaac 9205b5e7992SMatthew G. Knepley Not collective 9215b5e7992SMatthew G. Knepley 922c58f1c22SToby Isaac Input Parameters: 923c58f1c22SToby Isaac + label - the DMLabel 924c58f1c22SToby Isaac . point - the point 925c58f1c22SToby Isaac - value - The point value 926c58f1c22SToby Isaac 927c58f1c22SToby Isaac Level: intermediate 928c58f1c22SToby Isaac 9295aa44df4SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelClearValue(), DMLabelGetDefaultValue(), DMLabelSetDefaultValue() 930c58f1c22SToby Isaac @*/ 931c58f1c22SToby Isaac PetscErrorCode DMLabelSetValue(DMLabel label, PetscInt point, PetscInt value) 932c58f1c22SToby Isaac { 933c58f1c22SToby Isaac PetscInt v; 934c58f1c22SToby Isaac PetscErrorCode ierr; 935c58f1c22SToby Isaac 936c58f1c22SToby Isaac PetscFunctionBegin; 937d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9380c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 9395aa44df4SToby Isaac if (value == label->defaultValue) PetscFunctionReturn(0); 940b9907514SLisandro Dalcin ierr = DMLabelLookupAddStratum(label, value, &v);CHKERRQ(ierr); 941c58f1c22SToby Isaac /* Set key */ 9420c3c4a36SLisandro Dalcin ierr = DMLabelMakeInvalid_Private(label, v);CHKERRQ(ierr); 943e8f14785SLisandro Dalcin ierr = PetscHSetIAdd(label->ht[v], point);CHKERRQ(ierr); 944c58f1c22SToby Isaac PetscFunctionReturn(0); 945c58f1c22SToby Isaac } 946c58f1c22SToby Isaac 947c58f1c22SToby Isaac /*@ 948c58f1c22SToby Isaac DMLabelClearValue - Clear the value a label assigns to a point 949c58f1c22SToby Isaac 9505b5e7992SMatthew G. Knepley Not collective 9515b5e7992SMatthew G. Knepley 952c58f1c22SToby Isaac Input Parameters: 953c58f1c22SToby Isaac + label - the DMLabel 954c58f1c22SToby Isaac . point - the point 955c58f1c22SToby Isaac - value - The point value 956c58f1c22SToby Isaac 957c58f1c22SToby Isaac Level: intermediate 958c58f1c22SToby Isaac 959c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue() 960c58f1c22SToby Isaac @*/ 961c58f1c22SToby Isaac PetscErrorCode DMLabelClearValue(DMLabel label, PetscInt point, PetscInt value) 962c58f1c22SToby Isaac { 963ad8374ffSToby Isaac PetscInt v; 964c58f1c22SToby Isaac PetscErrorCode ierr; 965c58f1c22SToby Isaac 966c58f1c22SToby Isaac PetscFunctionBegin; 967d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 968c58f1c22SToby Isaac /* Find label value */ 9690c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 9700c3c4a36SLisandro Dalcin if (v < 0) PetscFunctionReturn(0); 9710c3c4a36SLisandro Dalcin 972eeed21e7SToby Isaac if (label->bt) { 973eeed21e7SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 974eeed21e7SToby Isaac ierr = PetscBTClear(label->bt, point - label->pStart);CHKERRQ(ierr); 975eeed21e7SToby Isaac } 9760c3c4a36SLisandro Dalcin 9770c3c4a36SLisandro Dalcin /* Delete key */ 9780c3c4a36SLisandro Dalcin ierr = DMLabelMakeInvalid_Private(label, v);CHKERRQ(ierr); 979e8f14785SLisandro Dalcin ierr = PetscHSetIDel(label->ht[v], point);CHKERRQ(ierr); 980c58f1c22SToby Isaac PetscFunctionReturn(0); 981c58f1c22SToby Isaac } 982c58f1c22SToby Isaac 983c58f1c22SToby Isaac /*@ 984c58f1c22SToby Isaac DMLabelInsertIS - Set all points in the IS to a value 985c58f1c22SToby Isaac 9865b5e7992SMatthew G. Knepley Not collective 9875b5e7992SMatthew G. Knepley 988c58f1c22SToby Isaac Input Parameters: 989c58f1c22SToby Isaac + label - the DMLabel 990c58f1c22SToby Isaac . is - the point IS 991c58f1c22SToby Isaac - value - The point value 992c58f1c22SToby Isaac 993c58f1c22SToby Isaac Level: intermediate 994c58f1c22SToby Isaac 995c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 996c58f1c22SToby Isaac @*/ 997c58f1c22SToby Isaac PetscErrorCode DMLabelInsertIS(DMLabel label, IS is, PetscInt value) 998c58f1c22SToby Isaac { 9990c3c4a36SLisandro Dalcin PetscInt v, n, p; 1000c58f1c22SToby Isaac const PetscInt *points; 1001c58f1c22SToby Isaac PetscErrorCode ierr; 1002c58f1c22SToby Isaac 1003c58f1c22SToby Isaac PetscFunctionBegin; 1004d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1005c58f1c22SToby Isaac PetscValidHeaderSpecific(is, IS_CLASSID, 2); 10060c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 10070c3c4a36SLisandro Dalcin if (value == label->defaultValue) PetscFunctionReturn(0); 1008b9907514SLisandro Dalcin ierr = DMLabelLookupAddStratum(label, value, &v);CHKERRQ(ierr); 10090c3c4a36SLisandro Dalcin /* Set keys */ 10100c3c4a36SLisandro Dalcin ierr = DMLabelMakeInvalid_Private(label, v);CHKERRQ(ierr); 1011c58f1c22SToby Isaac ierr = ISGetLocalSize(is, &n);CHKERRQ(ierr); 1012c58f1c22SToby Isaac ierr = ISGetIndices(is, &points);CHKERRQ(ierr); 1013e8f14785SLisandro Dalcin for (p = 0; p < n; ++p) {ierr = PetscHSetIAdd(label->ht[v], points[p]);CHKERRQ(ierr);} 1014c58f1c22SToby Isaac ierr = ISRestoreIndices(is, &points);CHKERRQ(ierr); 1015c58f1c22SToby Isaac PetscFunctionReturn(0); 1016c58f1c22SToby Isaac } 1017c58f1c22SToby Isaac 101884f0b6dfSMatthew G. Knepley /*@ 101984f0b6dfSMatthew G. Knepley DMLabelGetNumValues - Get the number of values that the DMLabel takes 102084f0b6dfSMatthew G. Knepley 10215b5e7992SMatthew G. Knepley Not collective 10225b5e7992SMatthew G. Knepley 102384f0b6dfSMatthew G. Knepley Input Parameter: 102484f0b6dfSMatthew G. Knepley . label - the DMLabel 102584f0b6dfSMatthew G. Knepley 102601d2d390SJose E. Roman Output Parameter: 102784f0b6dfSMatthew G. Knepley . numValues - the number of values 102884f0b6dfSMatthew G. Knepley 102984f0b6dfSMatthew G. Knepley Level: intermediate 103084f0b6dfSMatthew G. Knepley 103184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 103284f0b6dfSMatthew G. Knepley @*/ 1033c58f1c22SToby Isaac PetscErrorCode DMLabelGetNumValues(DMLabel label, PetscInt *numValues) 1034c58f1c22SToby Isaac { 1035c58f1c22SToby Isaac PetscFunctionBegin; 1036d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1037c58f1c22SToby Isaac PetscValidPointer(numValues, 2); 1038c58f1c22SToby Isaac *numValues = label->numStrata; 1039c58f1c22SToby Isaac PetscFunctionReturn(0); 1040c58f1c22SToby Isaac } 1041c58f1c22SToby Isaac 104284f0b6dfSMatthew G. Knepley /*@ 104384f0b6dfSMatthew G. Knepley DMLabelGetValueIS - Get an IS of all values that the DMlabel takes 104484f0b6dfSMatthew G. Knepley 10455b5e7992SMatthew G. Knepley Not collective 10465b5e7992SMatthew G. Knepley 104784f0b6dfSMatthew G. Knepley Input Parameter: 104884f0b6dfSMatthew G. Knepley . label - the DMLabel 104984f0b6dfSMatthew G. Knepley 105001d2d390SJose E. Roman Output Parameter: 105184f0b6dfSMatthew G. Knepley . is - the value IS 105284f0b6dfSMatthew G. Knepley 105384f0b6dfSMatthew G. Knepley Level: intermediate 105484f0b6dfSMatthew G. Knepley 1055*1d04cbbeSVaclav Hapla Notes: 1056*1d04cbbeSVaclav Hapla The output IS should be destroyed when no longer needed. 1057*1d04cbbeSVaclav Hapla Strata which are allocated but empty [DMLabelGetStratumSize() yields 0] are counted. 1058*1d04cbbeSVaclav Hapla If you need to count only nonempty strata, use DMLabelGetNonEmptyStratumValuesIS(). 1059*1d04cbbeSVaclav Hapla 1060*1d04cbbeSVaclav Hapla .seealso: DMLabelGetNonEmptyStratumValuesIS(), DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 106184f0b6dfSMatthew G. Knepley @*/ 1062c58f1c22SToby Isaac PetscErrorCode DMLabelGetValueIS(DMLabel label, IS *values) 1063c58f1c22SToby Isaac { 1064c58f1c22SToby Isaac PetscErrorCode ierr; 1065c58f1c22SToby Isaac 1066c58f1c22SToby Isaac PetscFunctionBegin; 1067d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1068c58f1c22SToby Isaac PetscValidPointer(values, 2); 1069c58f1c22SToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values);CHKERRQ(ierr); 1070c58f1c22SToby Isaac PetscFunctionReturn(0); 1071c58f1c22SToby Isaac } 1072c58f1c22SToby Isaac 107384f0b6dfSMatthew G. Knepley /*@ 1074*1d04cbbeSVaclav Hapla DMLabelGetNonEmptyStratumValuesIS - Get an IS of all values that the DMlabel takes 1075*1d04cbbeSVaclav Hapla 1076*1d04cbbeSVaclav Hapla Not collective 1077*1d04cbbeSVaclav Hapla 1078*1d04cbbeSVaclav Hapla Input Parameter: 1079*1d04cbbeSVaclav Hapla . label - the DMLabel 1080*1d04cbbeSVaclav Hapla 1081*1d04cbbeSVaclav Hapla Output Paramater: 1082*1d04cbbeSVaclav Hapla . is - the value IS 1083*1d04cbbeSVaclav Hapla 1084*1d04cbbeSVaclav Hapla Level: intermediate 1085*1d04cbbeSVaclav Hapla 1086*1d04cbbeSVaclav Hapla Notes: 1087*1d04cbbeSVaclav Hapla The output IS should be destroyed when no longer needed. 1088*1d04cbbeSVaclav Hapla This is similar to DMLabelGetValueIS() but counts only nonempty strata. 1089*1d04cbbeSVaclav Hapla 1090*1d04cbbeSVaclav Hapla .seealso: DMLabelGetValueIS(), DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 1091*1d04cbbeSVaclav Hapla @*/ 1092*1d04cbbeSVaclav Hapla PetscErrorCode DMLabelGetNonEmptyStratumValuesIS(DMLabel label, IS *values) 1093*1d04cbbeSVaclav Hapla { 1094*1d04cbbeSVaclav Hapla PetscInt i, j; 1095*1d04cbbeSVaclav Hapla PetscInt *valuesArr; 1096*1d04cbbeSVaclav Hapla PetscErrorCode ierr; 1097*1d04cbbeSVaclav Hapla 1098*1d04cbbeSVaclav Hapla PetscFunctionBegin; 1099*1d04cbbeSVaclav Hapla PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1100*1d04cbbeSVaclav Hapla PetscValidPointer(values, 2); 1101*1d04cbbeSVaclav Hapla ierr = PetscMalloc1(label->numStrata, &valuesArr);CHKERRQ(ierr); 1102*1d04cbbeSVaclav Hapla for (i = 0, j = 0; i < label->numStrata; i++) { 1103*1d04cbbeSVaclav Hapla PetscInt n; 1104*1d04cbbeSVaclav Hapla 1105*1d04cbbeSVaclav Hapla ierr = DMLabelGetStratumSize_Private(label, i, &n);CHKERRQ(ierr); 1106*1d04cbbeSVaclav Hapla if (n) valuesArr[j++] = label->stratumValues[i]; 1107*1d04cbbeSVaclav Hapla } 1108*1d04cbbeSVaclav Hapla if (j == label->numStrata) { 1109*1d04cbbeSVaclav Hapla ierr = ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values);CHKERRQ(ierr); 1110*1d04cbbeSVaclav Hapla } else { 1111*1d04cbbeSVaclav Hapla ierr = ISCreateGeneral(PETSC_COMM_SELF, j, valuesArr, PETSC_COPY_VALUES, values);CHKERRQ(ierr); 1112*1d04cbbeSVaclav Hapla } 1113*1d04cbbeSVaclav Hapla ierr = PetscFree(valuesArr);CHKERRQ(ierr); 1114*1d04cbbeSVaclav Hapla PetscFunctionReturn(0); 1115*1d04cbbeSVaclav Hapla } 1116*1d04cbbeSVaclav Hapla 1117*1d04cbbeSVaclav Hapla /*@ 1118d123abd9SMatthew G. Knepley DMLabelGetValueIndex - Get the index of a given value in the list of values for the DMlabel, or -1 if it is not present 1119d123abd9SMatthew G. Knepley 1120d123abd9SMatthew G. Knepley Not collective 1121d123abd9SMatthew G. Knepley 1122d123abd9SMatthew G. Knepley Input Parameters: 1123d123abd9SMatthew G. Knepley + label - the DMLabel 112497bb3fdcSJose E. Roman - value - the value 1125d123abd9SMatthew G. Knepley 112601d2d390SJose E. Roman Output Parameter: 1127d123abd9SMatthew G. Knepley . index - the index of value in the list of values 1128d123abd9SMatthew G. Knepley 1129d123abd9SMatthew G. Knepley Level: intermediate 1130d123abd9SMatthew G. Knepley 1131d123abd9SMatthew G. Knepley .seealso: DMLabelGetValueIS(), DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 1132d123abd9SMatthew G. Knepley @*/ 1133d123abd9SMatthew G. Knepley PetscErrorCode DMLabelGetValueIndex(DMLabel label, PetscInt value, PetscInt *index) 1134d123abd9SMatthew G. Knepley { 1135d123abd9SMatthew G. Knepley PetscInt v; 1136d123abd9SMatthew G. Knepley 1137d123abd9SMatthew G. Knepley PetscFunctionBegin; 1138d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1139d123abd9SMatthew G. Knepley PetscValidPointer(index, 3); 1140d123abd9SMatthew G. Knepley /* Do not assume they are sorted */ 1141d123abd9SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) if (label->stratumValues[v] == value) break; 1142d123abd9SMatthew G. Knepley if (v >= label->numStrata) *index = -1; 1143d123abd9SMatthew G. Knepley else *index = v; 1144d123abd9SMatthew G. Knepley PetscFunctionReturn(0); 1145d123abd9SMatthew G. Knepley } 1146d123abd9SMatthew G. Knepley 1147d123abd9SMatthew G. Knepley /*@ 114884f0b6dfSMatthew G. Knepley DMLabelHasStratum - Determine whether points exist with the given value 114984f0b6dfSMatthew G. Knepley 11505b5e7992SMatthew G. Knepley Not collective 11515b5e7992SMatthew G. Knepley 115284f0b6dfSMatthew G. Knepley Input Parameters: 115384f0b6dfSMatthew G. Knepley + label - the DMLabel 115484f0b6dfSMatthew G. Knepley - value - the stratum value 115584f0b6dfSMatthew G. Knepley 115601d2d390SJose E. Roman Output Parameter: 115784f0b6dfSMatthew G. Knepley . exists - Flag saying whether points exist 115884f0b6dfSMatthew G. Knepley 115984f0b6dfSMatthew G. Knepley Level: intermediate 116084f0b6dfSMatthew G. Knepley 116184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 116284f0b6dfSMatthew G. Knepley @*/ 1163fada774cSMatthew G. Knepley PetscErrorCode DMLabelHasStratum(DMLabel label, PetscInt value, PetscBool *exists) 1164fada774cSMatthew G. Knepley { 1165fada774cSMatthew G. Knepley PetscInt v; 11660c3c4a36SLisandro Dalcin PetscErrorCode ierr; 1167fada774cSMatthew G. Knepley 1168fada774cSMatthew G. Knepley PetscFunctionBegin; 1169d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1170fada774cSMatthew G. Knepley PetscValidPointer(exists, 3); 11710c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 11720c3c4a36SLisandro Dalcin *exists = v < 0 ? PETSC_FALSE : PETSC_TRUE; 1173fada774cSMatthew G. Knepley PetscFunctionReturn(0); 1174fada774cSMatthew G. Knepley } 1175fada774cSMatthew G. Knepley 117684f0b6dfSMatthew G. Knepley /*@ 117784f0b6dfSMatthew G. Knepley DMLabelGetStratumSize - Get the size of a stratum 117884f0b6dfSMatthew G. Knepley 11795b5e7992SMatthew G. Knepley Not collective 11805b5e7992SMatthew G. Knepley 118184f0b6dfSMatthew G. Knepley Input Parameters: 118284f0b6dfSMatthew G. Knepley + label - the DMLabel 118384f0b6dfSMatthew G. Knepley - value - the stratum value 118484f0b6dfSMatthew G. Knepley 118501d2d390SJose E. Roman Output Parameter: 118684f0b6dfSMatthew G. Knepley . size - The number of points in the stratum 118784f0b6dfSMatthew G. Knepley 118884f0b6dfSMatthew G. Knepley Level: intermediate 118984f0b6dfSMatthew G. Knepley 119084f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 119184f0b6dfSMatthew G. Knepley @*/ 1192c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumSize(DMLabel label, PetscInt value, PetscInt *size) 1193c58f1c22SToby Isaac { 1194c58f1c22SToby Isaac PetscInt v; 1195c58f1c22SToby Isaac PetscErrorCode ierr; 1196c58f1c22SToby Isaac 1197c58f1c22SToby Isaac PetscFunctionBegin; 1198d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1199c58f1c22SToby Isaac PetscValidPointer(size, 3); 12000c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 12019e63cc69SVaclav Hapla ierr = DMLabelGetStratumSize_Private(label, v, size);CHKERRQ(ierr); 1202c58f1c22SToby Isaac PetscFunctionReturn(0); 1203c58f1c22SToby Isaac } 1204c58f1c22SToby Isaac 120584f0b6dfSMatthew G. Knepley /*@ 120684f0b6dfSMatthew G. Knepley DMLabelGetStratumBounds - Get the largest and smallest point of a stratum 120784f0b6dfSMatthew G. Knepley 12085b5e7992SMatthew G. Knepley Not collective 12095b5e7992SMatthew G. Knepley 121084f0b6dfSMatthew G. Knepley Input Parameters: 121184f0b6dfSMatthew G. Knepley + label - the DMLabel 121284f0b6dfSMatthew G. Knepley - value - the stratum value 121384f0b6dfSMatthew G. Knepley 121401d2d390SJose E. Roman Output Parameters: 121584f0b6dfSMatthew G. Knepley + start - the smallest point in the stratum 121684f0b6dfSMatthew G. Knepley - end - the largest point in the stratum 121784f0b6dfSMatthew G. Knepley 121884f0b6dfSMatthew G. Knepley Level: intermediate 121984f0b6dfSMatthew G. Knepley 122084f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 122184f0b6dfSMatthew G. Knepley @*/ 1222c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumBounds(DMLabel label, PetscInt value, PetscInt *start, PetscInt *end) 1223c58f1c22SToby Isaac { 12240c3c4a36SLisandro Dalcin PetscInt v, min, max; 1225c58f1c22SToby Isaac PetscErrorCode ierr; 1226c58f1c22SToby Isaac 1227c58f1c22SToby Isaac PetscFunctionBegin; 1228d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1229cade499fSVaclav Hapla if (start) {PetscValidPointer(start, 3); *start = -1;} 1230cade499fSVaclav Hapla if (end) {PetscValidPointer(end, 4); *end = -1;} 12310c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 12320c3c4a36SLisandro Dalcin if (v < 0) PetscFunctionReturn(0); 1233c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 12340c3c4a36SLisandro Dalcin if (label->stratumSizes[v] <= 0) PetscFunctionReturn(0); 1235d6cb179aSToby Isaac ierr = ISGetMinMax(label->points[v], &min, &max);CHKERRQ(ierr); 1236d6cb179aSToby Isaac if (start) *start = min; 1237d6cb179aSToby Isaac if (end) *end = max+1; 1238c58f1c22SToby Isaac PetscFunctionReturn(0); 1239c58f1c22SToby Isaac } 1240c58f1c22SToby Isaac 124184f0b6dfSMatthew G. Knepley /*@ 124284f0b6dfSMatthew G. Knepley DMLabelGetStratumIS - Get an IS with the stratum points 124384f0b6dfSMatthew G. Knepley 12445b5e7992SMatthew G. Knepley Not collective 12455b5e7992SMatthew G. Knepley 124684f0b6dfSMatthew G. Knepley Input Parameters: 124784f0b6dfSMatthew G. Knepley + label - the DMLabel 124884f0b6dfSMatthew G. Knepley - value - the stratum value 124984f0b6dfSMatthew G. Knepley 125001d2d390SJose E. Roman Output Parameter: 125184f0b6dfSMatthew G. Knepley . points - The stratum points 125284f0b6dfSMatthew G. Knepley 125384f0b6dfSMatthew G. Knepley Level: intermediate 125484f0b6dfSMatthew G. Knepley 1255593ce467SVaclav Hapla Notes: 1256593ce467SVaclav Hapla The output IS should be destroyed when no longer needed. 1257593ce467SVaclav Hapla Returns NULL if the stratum is empty. 1258593ce467SVaclav Hapla 125984f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 126084f0b6dfSMatthew G. Knepley @*/ 1261c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumIS(DMLabel label, PetscInt value, IS *points) 1262c58f1c22SToby Isaac { 1263c58f1c22SToby Isaac PetscInt v; 1264c58f1c22SToby Isaac PetscErrorCode ierr; 1265c58f1c22SToby Isaac 1266c58f1c22SToby Isaac PetscFunctionBegin; 1267d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1268c58f1c22SToby Isaac PetscValidPointer(points, 3); 1269c58f1c22SToby Isaac *points = NULL; 12700c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 12710c3c4a36SLisandro Dalcin if (v < 0) PetscFunctionReturn(0); 1272c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 1273ad8374ffSToby Isaac ierr = PetscObjectReference((PetscObject) label->points[v]);CHKERRQ(ierr); 1274ad8374ffSToby Isaac *points = label->points[v]; 1275c58f1c22SToby Isaac PetscFunctionReturn(0); 1276c58f1c22SToby Isaac } 1277c58f1c22SToby Isaac 127884f0b6dfSMatthew G. Knepley /*@ 127984f0b6dfSMatthew G. Knepley DMLabelSetStratumIS - Set the stratum points using an IS 128084f0b6dfSMatthew G. Knepley 12815b5e7992SMatthew G. Knepley Not collective 12825b5e7992SMatthew G. Knepley 128384f0b6dfSMatthew G. Knepley Input Parameters: 128484f0b6dfSMatthew G. Knepley + label - the DMLabel 128584f0b6dfSMatthew G. Knepley . value - the stratum value 128684f0b6dfSMatthew G. Knepley - points - The stratum points 128784f0b6dfSMatthew G. Knepley 128884f0b6dfSMatthew G. Knepley Level: intermediate 128984f0b6dfSMatthew G. Knepley 129084f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 129184f0b6dfSMatthew G. Knepley @*/ 12924de306b1SToby Isaac PetscErrorCode DMLabelSetStratumIS(DMLabel label, PetscInt value, IS is) 12934de306b1SToby Isaac { 12940c3c4a36SLisandro Dalcin PetscInt v; 12954de306b1SToby Isaac PetscErrorCode ierr; 12964de306b1SToby Isaac 12974de306b1SToby Isaac PetscFunctionBegin; 1298d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1299d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(is, IS_CLASSID, 3); 1300b9907514SLisandro Dalcin ierr = DMLabelLookupAddStratum(label, value, &v);CHKERRQ(ierr); 13014de306b1SToby Isaac if (is == label->points[v]) PetscFunctionReturn(0); 13024de306b1SToby Isaac ierr = DMLabelClearStratum(label, value);CHKERRQ(ierr); 13034de306b1SToby Isaac ierr = ISGetLocalSize(is, &(label->stratumSizes[v]));CHKERRQ(ierr); 13044de306b1SToby Isaac ierr = PetscObjectReference((PetscObject)is);CHKERRQ(ierr); 13054de306b1SToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 13060c3c4a36SLisandro Dalcin label->points[v] = is; 13070c3c4a36SLisandro Dalcin label->validIS[v] = PETSC_TRUE; 1308277ea44aSLisandro Dalcin ierr = PetscObjectStateIncrease((PetscObject) label);CHKERRQ(ierr); 13094de306b1SToby Isaac if (label->bt) { 13104de306b1SToby Isaac const PetscInt *points; 13114de306b1SToby Isaac PetscInt p; 13124de306b1SToby Isaac 13134de306b1SToby Isaac ierr = ISGetIndices(is,&points);CHKERRQ(ierr); 13144de306b1SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 13154de306b1SToby Isaac const PetscInt point = points[p]; 13164de306b1SToby Isaac 13174de306b1SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 13184de306b1SToby Isaac ierr = PetscBTSet(label->bt, point - label->pStart);CHKERRQ(ierr); 13194de306b1SToby Isaac } 13204de306b1SToby Isaac } 13214de306b1SToby Isaac PetscFunctionReturn(0); 13224de306b1SToby Isaac } 13234de306b1SToby Isaac 132484f0b6dfSMatthew G. Knepley /*@ 132584f0b6dfSMatthew G. Knepley DMLabelClearStratum - Remove a stratum 13264de306b1SToby Isaac 13275b5e7992SMatthew G. Knepley Not collective 13285b5e7992SMatthew G. Knepley 132984f0b6dfSMatthew G. Knepley Input Parameters: 133084f0b6dfSMatthew G. Knepley + label - the DMLabel 133184f0b6dfSMatthew G. Knepley - value - the stratum value 133284f0b6dfSMatthew G. Knepley 133384f0b6dfSMatthew G. Knepley Level: intermediate 133484f0b6dfSMatthew G. Knepley 133584f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 133684f0b6dfSMatthew G. Knepley @*/ 1337c58f1c22SToby Isaac PetscErrorCode DMLabelClearStratum(DMLabel label, PetscInt value) 1338c58f1c22SToby Isaac { 1339c58f1c22SToby Isaac PetscInt v; 1340c58f1c22SToby Isaac PetscErrorCode ierr; 1341c58f1c22SToby Isaac 1342c58f1c22SToby Isaac PetscFunctionBegin; 1343d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13440c3c4a36SLisandro Dalcin ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 13450c3c4a36SLisandro Dalcin if (v < 0) PetscFunctionReturn(0); 13464de306b1SToby Isaac if (label->validIS[v]) { 13474de306b1SToby Isaac if (label->bt) { 1348c58f1c22SToby Isaac PetscInt i; 1349ad8374ffSToby Isaac const PetscInt *points; 1350c58f1c22SToby Isaac 1351ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 1352c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 1353ad8374ffSToby Isaac const PetscInt point = points[i]; 1354c58f1c22SToby Isaac 1355c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 1356c58f1c22SToby Isaac ierr = PetscBTClear(label->bt, point - label->pStart);CHKERRQ(ierr); 1357c58f1c22SToby Isaac } 1358ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v], &points);CHKERRQ(ierr); 1359c58f1c22SToby Isaac } 1360c58f1c22SToby Isaac label->stratumSizes[v] = 0; 13610c3c4a36SLisandro Dalcin ierr = ISDestroy(&label->points[v]);CHKERRQ(ierr); 1362277ea44aSLisandro Dalcin ierr = ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &label->points[v]);CHKERRQ(ierr); 13630c3c4a36SLisandro Dalcin ierr = PetscObjectSetName((PetscObject) label->points[v], "indices");CHKERRQ(ierr); 1364277ea44aSLisandro Dalcin ierr = PetscObjectStateIncrease((PetscObject) label);CHKERRQ(ierr); 1365c58f1c22SToby Isaac } else { 1366b9907514SLisandro Dalcin ierr = PetscHSetIClear(label->ht[v]);CHKERRQ(ierr); 1367c58f1c22SToby Isaac } 1368c58f1c22SToby Isaac PetscFunctionReturn(0); 1369c58f1c22SToby Isaac } 1370c58f1c22SToby Isaac 137184f0b6dfSMatthew G. Knepley /*@ 1372412e9a14SMatthew G. Knepley DMLabelSetStratumBounds - Efficiently give a contiguous set of points a given label value 1373412e9a14SMatthew G. Knepley 1374412e9a14SMatthew G. Knepley Not collective 1375412e9a14SMatthew G. Knepley 1376412e9a14SMatthew G. Knepley Input Parameters: 1377412e9a14SMatthew G. Knepley + label - The DMLabel 1378412e9a14SMatthew G. Knepley . value - The label value for all points 1379412e9a14SMatthew G. Knepley . pStart - The first point 1380412e9a14SMatthew G. Knepley - pEnd - A point beyond all marked points 1381412e9a14SMatthew G. Knepley 1382412e9a14SMatthew G. Knepley Note: The marks points are [pStart, pEnd), and only the bounds are stored. 1383412e9a14SMatthew G. Knepley 1384412e9a14SMatthew G. Knepley Level: intermediate 1385412e9a14SMatthew G. Knepley 1386412e9a14SMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelSetStratumIS(), DMLabelGetStratumIS() 1387412e9a14SMatthew G. Knepley @*/ 1388412e9a14SMatthew G. Knepley PetscErrorCode DMLabelSetStratumBounds(DMLabel label, PetscInt value, PetscInt pStart, PetscInt pEnd) 1389412e9a14SMatthew G. Knepley { 1390412e9a14SMatthew G. Knepley IS pIS; 1391412e9a14SMatthew G. Knepley PetscErrorCode ierr; 1392412e9a14SMatthew G. Knepley 1393412e9a14SMatthew G. Knepley PetscFunctionBegin; 1394412e9a14SMatthew G. Knepley ierr = ISCreateStride(PETSC_COMM_SELF, pEnd - pStart, pStart, 1, &pIS);CHKERRQ(ierr); 1395412e9a14SMatthew G. Knepley ierr = DMLabelSetStratumIS(label, value, pIS);CHKERRQ(ierr); 1396412e9a14SMatthew G. Knepley ierr = ISDestroy(&pIS);CHKERRQ(ierr); 1397412e9a14SMatthew G. Knepley PetscFunctionReturn(0); 1398412e9a14SMatthew G. Knepley } 1399412e9a14SMatthew G. Knepley 1400412e9a14SMatthew G. Knepley /*@ 1401d123abd9SMatthew G. Knepley DMLabelGetStratumPointIndex - Get the index of a point in a given stratum 1402d123abd9SMatthew G. Knepley 1403d123abd9SMatthew G. Knepley Not collective 1404d123abd9SMatthew G. Knepley 1405d123abd9SMatthew G. Knepley Input Parameters: 1406d123abd9SMatthew G. Knepley + label - The DMLabel 1407d123abd9SMatthew G. Knepley . value - The label value 1408d123abd9SMatthew G. Knepley - p - A point with this value 1409d123abd9SMatthew G. Knepley 1410d123abd9SMatthew G. Knepley Output Parameter: 1411d123abd9SMatthew G. Knepley . index - The index of this point in the stratum, or -1 if the point is not in the stratum or the stratum does not exist 1412d123abd9SMatthew G. Knepley 1413d123abd9SMatthew G. Knepley Level: intermediate 1414d123abd9SMatthew G. Knepley 1415d123abd9SMatthew G. Knepley .seealso: DMLabelGetValueIndex(), DMLabelGetStratumIS(), DMLabelCreate() 1416d123abd9SMatthew G. Knepley @*/ 1417d123abd9SMatthew G. Knepley PetscErrorCode DMLabelGetStratumPointIndex(DMLabel label, PetscInt value, PetscInt p, PetscInt *index) 1418d123abd9SMatthew G. Knepley { 1419d123abd9SMatthew G. Knepley const PetscInt *indices; 1420d123abd9SMatthew G. Knepley PetscInt v; 1421d123abd9SMatthew G. Knepley PetscErrorCode ierr; 1422d123abd9SMatthew G. Knepley 1423d123abd9SMatthew G. Knepley PetscFunctionBegin; 1424d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1425d123abd9SMatthew G. Knepley PetscValidPointer(index, 4); 1426d123abd9SMatthew G. Knepley *index = -1; 1427d123abd9SMatthew G. Knepley ierr = DMLabelLookupStratum(label, value, &v);CHKERRQ(ierr); 1428d123abd9SMatthew G. Knepley if (v < 0) PetscFunctionReturn(0); 1429d123abd9SMatthew G. Knepley ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 1430d123abd9SMatthew G. Knepley ierr = ISGetIndices(label->points[v], &indices);CHKERRQ(ierr); 1431d123abd9SMatthew G. Knepley ierr = PetscFindInt(p, label->stratumSizes[v], indices, index);CHKERRQ(ierr); 1432d123abd9SMatthew G. Knepley ierr = ISRestoreIndices(label->points[v], &indices);CHKERRQ(ierr); 1433d123abd9SMatthew G. Knepley PetscFunctionReturn(0); 1434d123abd9SMatthew G. Knepley } 1435d123abd9SMatthew G. Knepley 1436d123abd9SMatthew G. Knepley /*@ 143784f0b6dfSMatthew G. Knepley DMLabelFilter - Remove all points outside of [start, end) 143884f0b6dfSMatthew G. Knepley 14395b5e7992SMatthew G. Knepley Not collective 14405b5e7992SMatthew G. Knepley 144184f0b6dfSMatthew G. Knepley Input Parameters: 144284f0b6dfSMatthew G. Knepley + label - the DMLabel 144322cd2cdaSVaclav Hapla . start - the first point kept 144422cd2cdaSVaclav Hapla - end - one more than the last point kept 144584f0b6dfSMatthew G. Knepley 144684f0b6dfSMatthew G. Knepley Level: intermediate 144784f0b6dfSMatthew G. Knepley 144884f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 144984f0b6dfSMatthew G. Knepley @*/ 1450c58f1c22SToby Isaac PetscErrorCode DMLabelFilter(DMLabel label, PetscInt start, PetscInt end) 1451c58f1c22SToby Isaac { 1452c58f1c22SToby Isaac PetscInt v; 1453c58f1c22SToby Isaac PetscErrorCode ierr; 1454c58f1c22SToby Isaac 1455c58f1c22SToby Isaac PetscFunctionBegin; 1456d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 14570c3c4a36SLisandro Dalcin ierr = DMLabelDestroyIndex(label);CHKERRQ(ierr); 1458c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 1459c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 14609106b633SVaclav Hapla ierr = ISGeneralFilter(label->points[v], start, end);CHKERRQ(ierr); 1461c58f1c22SToby Isaac } 1462c58f1c22SToby Isaac ierr = DMLabelCreateIndex(label, start, end);CHKERRQ(ierr); 1463c58f1c22SToby Isaac PetscFunctionReturn(0); 1464c58f1c22SToby Isaac } 1465c58f1c22SToby Isaac 146684f0b6dfSMatthew G. Knepley /*@ 146784f0b6dfSMatthew G. Knepley DMLabelPermute - Create a new label with permuted points 146884f0b6dfSMatthew G. Knepley 14695b5e7992SMatthew G. Knepley Not collective 14705b5e7992SMatthew G. Knepley 147184f0b6dfSMatthew G. Knepley Input Parameters: 147284f0b6dfSMatthew G. Knepley + label - the DMLabel 147384f0b6dfSMatthew G. Knepley - permutation - the point permutation 147484f0b6dfSMatthew G. Knepley 147584f0b6dfSMatthew G. Knepley Output Parameter: 147684f0b6dfSMatthew G. Knepley . labelnew - the new label containing the permuted points 147784f0b6dfSMatthew G. Knepley 147884f0b6dfSMatthew G. Knepley Level: intermediate 147984f0b6dfSMatthew G. Knepley 148084f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 148184f0b6dfSMatthew G. Knepley @*/ 1482c58f1c22SToby Isaac PetscErrorCode DMLabelPermute(DMLabel label, IS permutation, DMLabel *labelNew) 1483c58f1c22SToby Isaac { 1484c58f1c22SToby Isaac const PetscInt *perm; 1485c58f1c22SToby Isaac PetscInt numValues, numPoints, v, q; 1486c58f1c22SToby Isaac PetscErrorCode ierr; 1487c58f1c22SToby Isaac 1488c58f1c22SToby Isaac PetscFunctionBegin; 1489d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1490d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(permutation, IS_CLASSID, 2); 1491c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 1492c58f1c22SToby Isaac ierr = DMLabelDuplicate(label, labelNew);CHKERRQ(ierr); 1493c58f1c22SToby Isaac ierr = DMLabelGetNumValues(*labelNew, &numValues);CHKERRQ(ierr); 1494c58f1c22SToby Isaac ierr = ISGetLocalSize(permutation, &numPoints);CHKERRQ(ierr); 1495c58f1c22SToby Isaac ierr = ISGetIndices(permutation, &perm);CHKERRQ(ierr); 1496c58f1c22SToby Isaac for (v = 0; v < numValues; ++v) { 1497c58f1c22SToby Isaac const PetscInt size = (*labelNew)->stratumSizes[v]; 1498ad8374ffSToby Isaac const PetscInt *points; 1499ad8374ffSToby Isaac PetscInt *pointsNew; 1500c58f1c22SToby Isaac 1501ad8374ffSToby Isaac ierr = ISGetIndices((*labelNew)->points[v],&points);CHKERRQ(ierr); 1502ad8374ffSToby Isaac ierr = PetscMalloc1(size,&pointsNew);CHKERRQ(ierr); 1503c58f1c22SToby Isaac for (q = 0; q < size; ++q) { 1504ad8374ffSToby Isaac const PetscInt point = points[q]; 1505c58f1c22SToby Isaac 1506c58f1c22SToby Isaac if ((point < 0) || (point >= numPoints)) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [0, %D) for the remapping", point, numPoints); 1507ad8374ffSToby Isaac pointsNew[q] = perm[point]; 1508c58f1c22SToby Isaac } 1509ad8374ffSToby Isaac ierr = ISRestoreIndices((*labelNew)->points[v],&points);CHKERRQ(ierr); 1510ad8374ffSToby Isaac ierr = PetscSortInt(size, pointsNew);CHKERRQ(ierr); 1511ad8374ffSToby Isaac ierr = ISDestroy(&((*labelNew)->points[v]));CHKERRQ(ierr); 1512fa8e8ae5SToby Isaac if (size > 0 && pointsNew[size - 1] == pointsNew[0] + size - 1) { 1513fa8e8ae5SToby Isaac ierr = ISCreateStride(PETSC_COMM_SELF,size,pointsNew[0],1,&((*labelNew)->points[v]));CHKERRQ(ierr); 1514fa8e8ae5SToby Isaac ierr = PetscFree(pointsNew);CHKERRQ(ierr); 1515fa8e8ae5SToby Isaac } else { 1516ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,size,pointsNew,PETSC_OWN_POINTER,&((*labelNew)->points[v]));CHKERRQ(ierr); 1517fa8e8ae5SToby Isaac } 1518ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject) ((*labelNew)->points[v]), "indices");CHKERRQ(ierr); 1519c58f1c22SToby Isaac } 1520c58f1c22SToby Isaac ierr = ISRestoreIndices(permutation, &perm);CHKERRQ(ierr); 1521c58f1c22SToby Isaac if (label->bt) { 1522c58f1c22SToby Isaac ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr); 1523c58f1c22SToby Isaac ierr = DMLabelCreateIndex(label, label->pStart, label->pEnd);CHKERRQ(ierr); 1524c58f1c22SToby Isaac } 1525c58f1c22SToby Isaac PetscFunctionReturn(0); 1526c58f1c22SToby Isaac } 1527c58f1c22SToby Isaac 152826c55118SMichael Lange PetscErrorCode DMLabelDistribute_Internal(DMLabel label, PetscSF sf, PetscSection *leafSection, PetscInt **leafStrata) 152926c55118SMichael Lange { 153026c55118SMichael Lange MPI_Comm comm; 153126c55118SMichael Lange PetscInt s, l, nroots, nleaves, dof, offset, size; 153226c55118SMichael Lange PetscInt *remoteOffsets, *rootStrata, *rootIdx; 153326c55118SMichael Lange PetscSection rootSection; 153426c55118SMichael Lange PetscSF labelSF; 153526c55118SMichael Lange PetscErrorCode ierr; 153626c55118SMichael Lange 153726c55118SMichael Lange PetscFunctionBegin; 153826c55118SMichael Lange if (label) {ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr);} 153926c55118SMichael Lange ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 154026c55118SMichael Lange /* Build a section of stratum values per point, generate the according SF 154126c55118SMichael Lange and distribute point-wise stratum values to leaves. */ 154226c55118SMichael Lange ierr = PetscSFGetGraph(sf, &nroots, &nleaves, NULL, NULL);CHKERRQ(ierr); 154326c55118SMichael Lange ierr = PetscSectionCreate(comm, &rootSection);CHKERRQ(ierr); 154426c55118SMichael Lange ierr = PetscSectionSetChart(rootSection, 0, nroots);CHKERRQ(ierr); 154526c55118SMichael Lange if (label) { 154626c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1547ad8374ffSToby Isaac const PetscInt *points; 1548ad8374ffSToby Isaac 1549ad8374ffSToby Isaac ierr = ISGetIndices(label->points[s], &points);CHKERRQ(ierr); 155026c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1551ad8374ffSToby Isaac ierr = PetscSectionGetDof(rootSection, points[l], &dof);CHKERRQ(ierr); 1552ad8374ffSToby Isaac ierr = PetscSectionSetDof(rootSection, points[l], dof+1);CHKERRQ(ierr); 155326c55118SMichael Lange } 1554ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[s], &points);CHKERRQ(ierr); 155526c55118SMichael Lange } 155626c55118SMichael Lange } 155726c55118SMichael Lange ierr = PetscSectionSetUp(rootSection);CHKERRQ(ierr); 155826c55118SMichael Lange /* Create a point-wise array of stratum values */ 155926c55118SMichael Lange ierr = PetscSectionGetStorageSize(rootSection, &size);CHKERRQ(ierr); 156026c55118SMichael Lange ierr = PetscMalloc1(size, &rootStrata);CHKERRQ(ierr); 156126c55118SMichael Lange ierr = PetscCalloc1(nroots, &rootIdx);CHKERRQ(ierr); 156226c55118SMichael Lange if (label) { 156326c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1564ad8374ffSToby Isaac const PetscInt *points; 1565ad8374ffSToby Isaac 1566ad8374ffSToby Isaac ierr = ISGetIndices(label->points[s], &points);CHKERRQ(ierr); 156726c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1568ad8374ffSToby Isaac const PetscInt p = points[l]; 156926c55118SMichael Lange ierr = PetscSectionGetOffset(rootSection, p, &offset);CHKERRQ(ierr); 157026c55118SMichael Lange rootStrata[offset+rootIdx[p]++] = label->stratumValues[s]; 157126c55118SMichael Lange } 1572ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[s], &points);CHKERRQ(ierr); 157326c55118SMichael Lange } 157426c55118SMichael Lange } 157526c55118SMichael Lange /* Build SF that maps label points to remote processes */ 157626c55118SMichael Lange ierr = PetscSectionCreate(comm, leafSection);CHKERRQ(ierr); 157726c55118SMichael Lange ierr = PetscSFDistributeSection(sf, rootSection, &remoteOffsets, *leafSection);CHKERRQ(ierr); 157826c55118SMichael Lange ierr = PetscSFCreateSectionSF(sf, rootSection, remoteOffsets, *leafSection, &labelSF);CHKERRQ(ierr); 157926c55118SMichael Lange ierr = PetscFree(remoteOffsets);CHKERRQ(ierr); 158026c55118SMichael Lange /* Send the strata for each point over the derived SF */ 158126c55118SMichael Lange ierr = PetscSectionGetStorageSize(*leafSection, &size);CHKERRQ(ierr); 158226c55118SMichael Lange ierr = PetscMalloc1(size, leafStrata);CHKERRQ(ierr); 1583ad227feaSJunchao Zhang ierr = PetscSFBcastBegin(labelSF, MPIU_INT, rootStrata, *leafStrata,MPI_REPLACE);CHKERRQ(ierr); 1584ad227feaSJunchao Zhang ierr = PetscSFBcastEnd(labelSF, MPIU_INT, rootStrata, *leafStrata,MPI_REPLACE);CHKERRQ(ierr); 158526c55118SMichael Lange /* Clean up */ 158626c55118SMichael Lange ierr = PetscFree(rootStrata);CHKERRQ(ierr); 158726c55118SMichael Lange ierr = PetscFree(rootIdx);CHKERRQ(ierr); 158826c55118SMichael Lange ierr = PetscSectionDestroy(&rootSection);CHKERRQ(ierr); 158926c55118SMichael Lange ierr = PetscSFDestroy(&labelSF);CHKERRQ(ierr); 159026c55118SMichael Lange PetscFunctionReturn(0); 159126c55118SMichael Lange } 159226c55118SMichael Lange 159384f0b6dfSMatthew G. Knepley /*@ 159484f0b6dfSMatthew G. Knepley DMLabelDistribute - Create a new label pushed forward over the PetscSF 159584f0b6dfSMatthew G. Knepley 15965b5e7992SMatthew G. Knepley Collective on sf 15975b5e7992SMatthew G. Knepley 159884f0b6dfSMatthew G. Knepley Input Parameters: 159984f0b6dfSMatthew G. Knepley + label - the DMLabel 160084f0b6dfSMatthew G. Knepley - sf - the map from old to new distribution 160184f0b6dfSMatthew G. Knepley 160284f0b6dfSMatthew G. Knepley Output Parameter: 160384f0b6dfSMatthew G. Knepley . labelnew - the new redistributed label 160484f0b6dfSMatthew G. Knepley 160584f0b6dfSMatthew G. Knepley Level: intermediate 160684f0b6dfSMatthew G. Knepley 160784f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 160884f0b6dfSMatthew G. Knepley @*/ 1609c58f1c22SToby Isaac PetscErrorCode DMLabelDistribute(DMLabel label, PetscSF sf, DMLabel *labelNew) 1610c58f1c22SToby Isaac { 1611c58f1c22SToby Isaac MPI_Comm comm; 161226c55118SMichael Lange PetscSection leafSection; 161326c55118SMichael Lange PetscInt p, pStart, pEnd, s, size, dof, offset, stratum; 161426c55118SMichael Lange PetscInt *leafStrata, *strataIdx; 1615ad8374ffSToby Isaac PetscInt **points; 1616d67d17b1SMatthew G. Knepley const char *lname = NULL; 1617c58f1c22SToby Isaac char *name; 1618c58f1c22SToby Isaac PetscInt nameSize; 1619e8f14785SLisandro Dalcin PetscHSetI stratumHash; 1620c58f1c22SToby Isaac size_t len = 0; 162126c55118SMichael Lange PetscMPIInt rank; 1622c58f1c22SToby Isaac PetscErrorCode ierr; 1623c58f1c22SToby Isaac 1624c58f1c22SToby Isaac PetscFunctionBegin; 1625d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 1626f018e600SMatthew G. Knepley if (label) { 1627f018e600SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1628f018e600SMatthew G. Knepley ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 1629f018e600SMatthew G. Knepley } 1630c58f1c22SToby Isaac ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 1631ffc4695bSBarry Smith ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr); 1632c58f1c22SToby Isaac /* Bcast name */ 1633dd400576SPatrick Sanan if (rank == 0) { 1634d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) label, &lname);CHKERRQ(ierr); 1635d67d17b1SMatthew G. Knepley ierr = PetscStrlen(lname, &len);CHKERRQ(ierr); 1636d67d17b1SMatthew G. Knepley } 1637c58f1c22SToby Isaac nameSize = len; 1638ffc4695bSBarry Smith ierr = MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm);CHKERRMPI(ierr); 1639c58f1c22SToby Isaac ierr = PetscMalloc1(nameSize+1, &name);CHKERRQ(ierr); 1640dd400576SPatrick Sanan if (rank == 0) {ierr = PetscArraycpy(name, lname, nameSize+1);CHKERRQ(ierr);} 1641ffc4695bSBarry Smith ierr = MPI_Bcast(name, nameSize+1, MPI_CHAR, 0, comm);CHKERRMPI(ierr); 1642d67d17b1SMatthew G. Knepley ierr = DMLabelCreate(PETSC_COMM_SELF, name, labelNew);CHKERRQ(ierr); 1643c58f1c22SToby Isaac ierr = PetscFree(name);CHKERRQ(ierr); 164477d236dfSMichael Lange /* Bcast defaultValue */ 1645dd400576SPatrick Sanan if (rank == 0) (*labelNew)->defaultValue = label->defaultValue; 1646ffc4695bSBarry Smith ierr = MPI_Bcast(&(*labelNew)->defaultValue, 1, MPIU_INT, 0, comm);CHKERRMPI(ierr); 164726c55118SMichael Lange /* Distribute stratum values over the SF and get the point mapping on the receiver */ 164826c55118SMichael Lange ierr = DMLabelDistribute_Internal(label, sf, &leafSection, &leafStrata);CHKERRQ(ierr); 16495cbdf6fcSMichael Lange /* Determine received stratum values and initialise new label*/ 1650e8f14785SLisandro Dalcin ierr = PetscHSetICreate(&stratumHash);CHKERRQ(ierr); 165126c55118SMichael Lange ierr = PetscSectionGetStorageSize(leafSection, &size);CHKERRQ(ierr); 1652e8f14785SLisandro Dalcin for (p = 0; p < size; ++p) {ierr = PetscHSetIAdd(stratumHash, leafStrata[p]);CHKERRQ(ierr);} 1653e8f14785SLisandro Dalcin ierr = PetscHSetIGetSize(stratumHash, &(*labelNew)->numStrata);CHKERRQ(ierr); 1654ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->validIS);CHKERRQ(ierr); 1655ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) (*labelNew)->validIS[s] = PETSC_TRUE; 16565cbdf6fcSMichael Lange ierr = PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->stratumValues);CHKERRQ(ierr); 16575cbdf6fcSMichael Lange /* Turn leafStrata into indices rather than stratum values */ 16585cbdf6fcSMichael Lange offset = 0; 1659e8f14785SLisandro Dalcin ierr = PetscHSetIGetElems(stratumHash, &offset, (*labelNew)->stratumValues);CHKERRQ(ierr); 1660a205f1fdSToby Isaac ierr = PetscSortInt((*labelNew)->numStrata,(*labelNew)->stratumValues);CHKERRQ(ierr); 166190e9b2aeSLisandro Dalcin for (s = 0; s < (*labelNew)->numStrata; ++s) { 166290e9b2aeSLisandro Dalcin ierr = PetscHMapISet((*labelNew)->hmap, (*labelNew)->stratumValues[s], s);CHKERRQ(ierr); 166390e9b2aeSLisandro Dalcin } 16645cbdf6fcSMichael Lange for (p = 0; p < size; ++p) { 1665231b9e6fSMatthew G. Knepley for (s = 0; s < (*labelNew)->numStrata; ++s) { 1666231b9e6fSMatthew G. Knepley if (leafStrata[p] == (*labelNew)->stratumValues[s]) {leafStrata[p] = s; break;} 16675cbdf6fcSMichael Lange } 16685cbdf6fcSMichael Lange } 1669c58f1c22SToby Isaac /* Rebuild the point strata on the receiver */ 1670c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata,&(*labelNew)->stratumSizes);CHKERRQ(ierr); 1671c58f1c22SToby Isaac ierr = PetscSectionGetChart(leafSection, &pStart, &pEnd);CHKERRQ(ierr); 1672c58f1c22SToby Isaac for (p=pStart; p<pEnd; p++) { 1673c58f1c22SToby Isaac ierr = PetscSectionGetDof(leafSection, p, &dof);CHKERRQ(ierr); 1674c58f1c22SToby Isaac ierr = PetscSectionGetOffset(leafSection, p, &offset);CHKERRQ(ierr); 1675c58f1c22SToby Isaac for (s=0; s<dof; s++) { 1676c58f1c22SToby Isaac (*labelNew)->stratumSizes[leafStrata[offset+s]]++; 1677c58f1c22SToby Isaac } 1678c58f1c22SToby Isaac } 1679c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata,&(*labelNew)->ht);CHKERRQ(ierr); 1680c58f1c22SToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata,&(*labelNew)->points);CHKERRQ(ierr); 1681ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata,&points);CHKERRQ(ierr); 1682c58f1c22SToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) { 1683e8f14785SLisandro Dalcin ierr = PetscHSetICreate(&(*labelNew)->ht[s]);CHKERRQ(ierr); 1684ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->stratumSizes[s], &(points[s]));CHKERRQ(ierr); 1685c58f1c22SToby Isaac } 1686c58f1c22SToby Isaac /* Insert points into new strata */ 1687c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata, &strataIdx);CHKERRQ(ierr); 1688c58f1c22SToby Isaac ierr = PetscSectionGetChart(leafSection, &pStart, &pEnd);CHKERRQ(ierr); 1689c58f1c22SToby Isaac for (p=pStart; p<pEnd; p++) { 1690c58f1c22SToby Isaac ierr = PetscSectionGetDof(leafSection, p, &dof);CHKERRQ(ierr); 1691c58f1c22SToby Isaac ierr = PetscSectionGetOffset(leafSection, p, &offset);CHKERRQ(ierr); 1692c58f1c22SToby Isaac for (s=0; s<dof; s++) { 1693c58f1c22SToby Isaac stratum = leafStrata[offset+s]; 1694ad8374ffSToby Isaac points[stratum][strataIdx[stratum]++] = p; 1695c58f1c22SToby Isaac } 1696c58f1c22SToby Isaac } 1697ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; s++) { 1698ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,(*labelNew)->stratumSizes[s],&(points[s][0]),PETSC_OWN_POINTER,&((*labelNew)->points[s]));CHKERRQ(ierr); 1699ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject)((*labelNew)->points[s]),"indices");CHKERRQ(ierr); 1700ad8374ffSToby Isaac } 1701ad8374ffSToby Isaac ierr = PetscFree(points);CHKERRQ(ierr); 1702e8f14785SLisandro Dalcin ierr = PetscHSetIDestroy(&stratumHash);CHKERRQ(ierr); 1703c58f1c22SToby Isaac ierr = PetscFree(leafStrata);CHKERRQ(ierr); 1704c58f1c22SToby Isaac ierr = PetscFree(strataIdx);CHKERRQ(ierr); 1705c58f1c22SToby Isaac ierr = PetscSectionDestroy(&leafSection);CHKERRQ(ierr); 1706c58f1c22SToby Isaac PetscFunctionReturn(0); 1707c58f1c22SToby Isaac } 1708c58f1c22SToby Isaac 17097937d9ceSMichael Lange /*@ 17107937d9ceSMichael Lange DMLabelGather - Gather all label values from leafs into roots 17117937d9ceSMichael Lange 17125b5e7992SMatthew G. Knepley Collective on sf 17135b5e7992SMatthew G. Knepley 17147937d9ceSMichael Lange Input Parameters: 17157937d9ceSMichael Lange + label - the DMLabel 171684f0b6dfSMatthew G. Knepley - sf - the Star Forest point communication map 17177937d9ceSMichael Lange 171884f0b6dfSMatthew G. Knepley Output Parameters: 171984f0b6dfSMatthew G. Knepley . labelNew - the new DMLabel with localised leaf values 17207937d9ceSMichael Lange 17217937d9ceSMichael Lange Level: developer 17227937d9ceSMichael Lange 17237937d9ceSMichael Lange Note: This is the inverse operation to DMLabelDistribute. 17247937d9ceSMichael Lange 17257937d9ceSMichael Lange .seealso: DMLabelDistribute() 17267937d9ceSMichael Lange @*/ 17277937d9ceSMichael Lange PetscErrorCode DMLabelGather(DMLabel label, PetscSF sf, DMLabel *labelNew) 17287937d9ceSMichael Lange { 17297937d9ceSMichael Lange MPI_Comm comm; 17307937d9ceSMichael Lange PetscSection rootSection; 17317937d9ceSMichael Lange PetscSF sfLabel; 17327937d9ceSMichael Lange PetscSFNode *rootPoints, *leafPoints; 17337937d9ceSMichael Lange PetscInt p, s, d, nroots, nleaves, nmultiroots, idx, dof, offset; 17347937d9ceSMichael Lange const PetscInt *rootDegree, *ilocal; 17357937d9ceSMichael Lange PetscInt *rootStrata; 1736d67d17b1SMatthew G. Knepley const char *lname; 17377937d9ceSMichael Lange char *name; 17387937d9ceSMichael Lange PetscInt nameSize; 17397937d9ceSMichael Lange size_t len = 0; 17409852e123SBarry Smith PetscMPIInt rank, size; 17417937d9ceSMichael Lange PetscErrorCode ierr; 17427937d9ceSMichael Lange 17437937d9ceSMichael Lange PetscFunctionBegin; 1744d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1745d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 17467937d9ceSMichael Lange ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 1747ffc4695bSBarry Smith ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr); 1748ffc4695bSBarry Smith ierr = MPI_Comm_size(comm, &size);CHKERRMPI(ierr); 17497937d9ceSMichael Lange /* Bcast name */ 1750dd400576SPatrick Sanan if (rank == 0) { 1751d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) label, &lname);CHKERRQ(ierr); 1752d67d17b1SMatthew G. Knepley ierr = PetscStrlen(lname, &len);CHKERRQ(ierr); 1753d67d17b1SMatthew G. Knepley } 17547937d9ceSMichael Lange nameSize = len; 1755ffc4695bSBarry Smith ierr = MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm);CHKERRMPI(ierr); 17567937d9ceSMichael Lange ierr = PetscMalloc1(nameSize+1, &name);CHKERRQ(ierr); 1757dd400576SPatrick Sanan if (rank == 0) {ierr = PetscArraycpy(name, lname, nameSize+1);CHKERRQ(ierr);} 1758ffc4695bSBarry Smith ierr = MPI_Bcast(name, nameSize+1, MPI_CHAR, 0, comm);CHKERRMPI(ierr); 1759d67d17b1SMatthew G. Knepley ierr = DMLabelCreate(PETSC_COMM_SELF, name, labelNew);CHKERRQ(ierr); 17607937d9ceSMichael Lange ierr = PetscFree(name);CHKERRQ(ierr); 17617937d9ceSMichael Lange /* Gather rank/index pairs of leaves into local roots to build 17627937d9ceSMichael Lange an inverse, multi-rooted SF. Note that this ignores local leaf 17637937d9ceSMichael Lange indexing due to the use of the multiSF in PetscSFGather. */ 17647937d9ceSMichael Lange ierr = PetscSFGetGraph(sf, &nroots, &nleaves, &ilocal, NULL);CHKERRQ(ierr); 1765dc53bc9bSMatthew G. Knepley ierr = PetscMalloc1(nroots, &leafPoints);CHKERRQ(ierr); 1766dc53bc9bSMatthew G. Knepley for (p = 0; p < nroots; ++p) leafPoints[p].rank = leafPoints[p].index = -1; 17677937d9ceSMichael Lange for (p = 0; p < nleaves; p++) { 17688212dd46SStefano Zampini PetscInt ilp = ilocal ? ilocal[p] : p; 17698212dd46SStefano Zampini 17708212dd46SStefano Zampini leafPoints[ilp].index = ilp; 17718212dd46SStefano Zampini leafPoints[ilp].rank = rank; 17727937d9ceSMichael Lange } 17737937d9ceSMichael Lange ierr = PetscSFComputeDegreeBegin(sf, &rootDegree);CHKERRQ(ierr); 17747937d9ceSMichael Lange ierr = PetscSFComputeDegreeEnd(sf, &rootDegree);CHKERRQ(ierr); 17757937d9ceSMichael Lange for (p = 0, nmultiroots = 0; p < nroots; ++p) nmultiroots += rootDegree[p]; 17767937d9ceSMichael Lange ierr = PetscMalloc1(nmultiroots, &rootPoints);CHKERRQ(ierr); 17777937d9ceSMichael Lange ierr = PetscSFGatherBegin(sf, MPIU_2INT, leafPoints, rootPoints);CHKERRQ(ierr); 17787937d9ceSMichael Lange ierr = PetscSFGatherEnd(sf, MPIU_2INT, leafPoints, rootPoints);CHKERRQ(ierr); 17797937d9ceSMichael Lange ierr = PetscSFCreate(comm,& sfLabel);CHKERRQ(ierr); 17807937d9ceSMichael Lange ierr = PetscSFSetGraph(sfLabel, nroots, nmultiroots, NULL, PETSC_OWN_POINTER, rootPoints, PETSC_OWN_POINTER);CHKERRQ(ierr); 17817937d9ceSMichael Lange /* Migrate label over inverted SF to pull stratum values at leaves into roots. */ 17827937d9ceSMichael Lange ierr = DMLabelDistribute_Internal(label, sfLabel, &rootSection, &rootStrata);CHKERRQ(ierr); 17837937d9ceSMichael Lange /* Rebuild the point strata on the receiver */ 17847937d9ceSMichael Lange for (p = 0, idx = 0; p < nroots; p++) { 17857937d9ceSMichael Lange for (d = 0; d < rootDegree[p]; d++) { 17867937d9ceSMichael Lange ierr = PetscSectionGetDof(rootSection, idx+d, &dof);CHKERRQ(ierr); 17877937d9ceSMichael Lange ierr = PetscSectionGetOffset(rootSection, idx+d, &offset);CHKERRQ(ierr); 17887937d9ceSMichael Lange for (s = 0; s < dof; s++) {ierr = DMLabelSetValue(*labelNew, p, rootStrata[offset+s]);CHKERRQ(ierr);} 17897937d9ceSMichael Lange } 17907937d9ceSMichael Lange idx += rootDegree[p]; 17917937d9ceSMichael Lange } 179277e0c0e7SMichael Lange ierr = PetscFree(leafPoints);CHKERRQ(ierr); 179377e0c0e7SMichael Lange ierr = PetscFree(rootStrata);CHKERRQ(ierr); 179477e0c0e7SMichael Lange ierr = PetscSectionDestroy(&rootSection);CHKERRQ(ierr); 179577e0c0e7SMichael Lange ierr = PetscSFDestroy(&sfLabel);CHKERRQ(ierr); 17967937d9ceSMichael Lange PetscFunctionReturn(0); 17977937d9ceSMichael Lange } 17987937d9ceSMichael Lange 179984f0b6dfSMatthew G. Knepley /*@ 180084f0b6dfSMatthew G. Knepley DMLabelConvertToSection - Make a PetscSection/IS pair that encodes the label 180184f0b6dfSMatthew G. Knepley 18025b5e7992SMatthew G. Knepley Not collective 18035b5e7992SMatthew G. Knepley 180484f0b6dfSMatthew G. Knepley Input Parameter: 180584f0b6dfSMatthew G. Knepley . label - the DMLabel 180684f0b6dfSMatthew G. Knepley 180784f0b6dfSMatthew G. Knepley Output Parameters: 180884f0b6dfSMatthew G. Knepley + section - the section giving offsets for each stratum 180984f0b6dfSMatthew G. Knepley - is - An IS containing all the label points 181084f0b6dfSMatthew G. Knepley 181184f0b6dfSMatthew G. Knepley Level: developer 181284f0b6dfSMatthew G. Knepley 181384f0b6dfSMatthew G. Knepley .seealso: DMLabelDistribute() 181484f0b6dfSMatthew G. Knepley @*/ 1815c58f1c22SToby Isaac PetscErrorCode DMLabelConvertToSection(DMLabel label, PetscSection *section, IS *is) 1816c58f1c22SToby Isaac { 1817c58f1c22SToby Isaac IS vIS; 1818c58f1c22SToby Isaac const PetscInt *values; 1819c58f1c22SToby Isaac PetscInt *points; 1820c58f1c22SToby Isaac PetscInt nV, vS = 0, vE = 0, v, N; 1821c58f1c22SToby Isaac PetscErrorCode ierr; 1822c58f1c22SToby Isaac 1823c58f1c22SToby Isaac PetscFunctionBegin; 1824d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1825c58f1c22SToby Isaac ierr = DMLabelGetNumValues(label, &nV);CHKERRQ(ierr); 1826c58f1c22SToby Isaac ierr = DMLabelGetValueIS(label, &vIS);CHKERRQ(ierr); 1827c58f1c22SToby Isaac ierr = ISGetIndices(vIS, &values);CHKERRQ(ierr); 1828c58f1c22SToby Isaac if (nV) {vS = values[0]; vE = values[0]+1;} 1829c58f1c22SToby Isaac for (v = 1; v < nV; ++v) { 1830c58f1c22SToby Isaac vS = PetscMin(vS, values[v]); 1831c58f1c22SToby Isaac vE = PetscMax(vE, values[v]+1); 1832c58f1c22SToby Isaac } 1833c58f1c22SToby Isaac ierr = PetscSectionCreate(PETSC_COMM_SELF, section);CHKERRQ(ierr); 1834c58f1c22SToby Isaac ierr = PetscSectionSetChart(*section, vS, vE);CHKERRQ(ierr); 1835c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 1836c58f1c22SToby Isaac PetscInt n; 1837c58f1c22SToby Isaac 1838c58f1c22SToby Isaac ierr = DMLabelGetStratumSize(label, values[v], &n);CHKERRQ(ierr); 1839c58f1c22SToby Isaac ierr = PetscSectionSetDof(*section, values[v], n);CHKERRQ(ierr); 1840c58f1c22SToby Isaac } 1841c58f1c22SToby Isaac ierr = PetscSectionSetUp(*section);CHKERRQ(ierr); 1842c58f1c22SToby Isaac ierr = PetscSectionGetStorageSize(*section, &N);CHKERRQ(ierr); 1843c58f1c22SToby Isaac ierr = PetscMalloc1(N, &points);CHKERRQ(ierr); 1844c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 1845c58f1c22SToby Isaac IS is; 1846c58f1c22SToby Isaac const PetscInt *spoints; 1847c58f1c22SToby Isaac PetscInt dof, off, p; 1848c58f1c22SToby Isaac 1849c58f1c22SToby Isaac ierr = PetscSectionGetDof(*section, values[v], &dof);CHKERRQ(ierr); 1850c58f1c22SToby Isaac ierr = PetscSectionGetOffset(*section, values[v], &off);CHKERRQ(ierr); 1851c58f1c22SToby Isaac ierr = DMLabelGetStratumIS(label, values[v], &is);CHKERRQ(ierr); 1852c58f1c22SToby Isaac ierr = ISGetIndices(is, &spoints);CHKERRQ(ierr); 1853c58f1c22SToby Isaac for (p = 0; p < dof; ++p) points[off+p] = spoints[p]; 1854c58f1c22SToby Isaac ierr = ISRestoreIndices(is, &spoints);CHKERRQ(ierr); 1855c58f1c22SToby Isaac ierr = ISDestroy(&is);CHKERRQ(ierr); 1856c58f1c22SToby Isaac } 1857c58f1c22SToby Isaac ierr = ISRestoreIndices(vIS, &values);CHKERRQ(ierr); 1858c58f1c22SToby Isaac ierr = ISDestroy(&vIS);CHKERRQ(ierr); 1859c58f1c22SToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF, N, points, PETSC_OWN_POINTER, is);CHKERRQ(ierr); 1860c58f1c22SToby Isaac PetscFunctionReturn(0); 1861c58f1c22SToby Isaac } 1862c58f1c22SToby Isaac 186384f0b6dfSMatthew G. Knepley /*@ 1864c58f1c22SToby Isaac PetscSectionCreateGlobalSectionLabel - Create a section describing the global field layout using 1865c58f1c22SToby Isaac the local section and an SF describing the section point overlap. 1866c58f1c22SToby Isaac 18675b5e7992SMatthew G. Knepley Collective on sf 18685b5e7992SMatthew G. Knepley 1869c58f1c22SToby Isaac Input Parameters: 1870c58f1c22SToby Isaac + s - The PetscSection for the local field layout 1871c58f1c22SToby Isaac . sf - The SF describing parallel layout of the section points 1872c58f1c22SToby Isaac . includeConstraints - By default this is PETSC_FALSE, meaning that the global field vector will not possess constrained dofs 1873c58f1c22SToby Isaac . label - The label specifying the points 1874c58f1c22SToby Isaac - labelValue - The label stratum specifying the points 1875c58f1c22SToby Isaac 1876c58f1c22SToby Isaac Output Parameter: 1877c58f1c22SToby Isaac . gsection - The PetscSection for the global field layout 1878c58f1c22SToby Isaac 1879c58f1c22SToby Isaac Note: This gives negative sizes and offsets to points not owned by this process 1880c58f1c22SToby Isaac 1881c58f1c22SToby Isaac Level: developer 1882c58f1c22SToby Isaac 1883c58f1c22SToby Isaac .seealso: PetscSectionCreate() 1884c58f1c22SToby Isaac @*/ 1885c58f1c22SToby Isaac PetscErrorCode PetscSectionCreateGlobalSectionLabel(PetscSection s, PetscSF sf, PetscBool includeConstraints, DMLabel label, PetscInt labelValue, PetscSection *gsection) 1886c58f1c22SToby Isaac { 1887c58f1c22SToby Isaac PetscInt *neg = NULL, *tmpOff = NULL; 1888c58f1c22SToby Isaac PetscInt pStart, pEnd, p, dof, cdof, off, globalOff = 0, nroots; 1889c58f1c22SToby Isaac PetscErrorCode ierr; 1890c58f1c22SToby Isaac 1891c58f1c22SToby Isaac PetscFunctionBegin; 1892d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(s, PETSC_SECTION_CLASSID, 1); 1893d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 1894d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 4); 1895c58f1c22SToby Isaac ierr = PetscSectionCreate(PetscObjectComm((PetscObject) s), gsection);CHKERRQ(ierr); 1896c58f1c22SToby Isaac ierr = PetscSectionGetChart(s, &pStart, &pEnd);CHKERRQ(ierr); 1897c58f1c22SToby Isaac ierr = PetscSectionSetChart(*gsection, pStart, pEnd);CHKERRQ(ierr); 1898c58f1c22SToby Isaac ierr = PetscSFGetGraph(sf, &nroots, NULL, NULL, NULL);CHKERRQ(ierr); 1899c58f1c22SToby Isaac if (nroots >= 0) { 1900c58f1c22SToby Isaac if (nroots < pEnd-pStart) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "PetscSF nroots %d < %d section size", nroots, pEnd-pStart); 1901c58f1c22SToby Isaac ierr = PetscCalloc1(nroots, &neg);CHKERRQ(ierr); 1902c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1903c58f1c22SToby Isaac ierr = PetscCalloc1(nroots, &tmpOff);CHKERRQ(ierr); 1904c58f1c22SToby Isaac } else { 1905c58f1c22SToby Isaac tmpOff = &(*gsection)->atlasDof[-pStart]; 1906c58f1c22SToby Isaac } 1907c58f1c22SToby Isaac } 1908c58f1c22SToby Isaac /* Mark ghost points with negative dof */ 1909c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) { 1910c58f1c22SToby Isaac PetscInt value; 1911c58f1c22SToby Isaac 1912c58f1c22SToby Isaac ierr = DMLabelGetValue(label, p, &value);CHKERRQ(ierr); 1913c58f1c22SToby Isaac if (value != labelValue) continue; 1914c58f1c22SToby Isaac ierr = PetscSectionGetDof(s, p, &dof);CHKERRQ(ierr); 1915c58f1c22SToby Isaac ierr = PetscSectionSetDof(*gsection, p, dof);CHKERRQ(ierr); 1916c58f1c22SToby Isaac ierr = PetscSectionGetConstraintDof(s, p, &cdof);CHKERRQ(ierr); 1917c58f1c22SToby Isaac if (!includeConstraints && cdof > 0) {ierr = PetscSectionSetConstraintDof(*gsection, p, cdof);CHKERRQ(ierr);} 1918c58f1c22SToby Isaac if (neg) neg[p] = -(dof+1); 1919c58f1c22SToby Isaac } 1920c58f1c22SToby Isaac ierr = PetscSectionSetUpBC(*gsection);CHKERRQ(ierr); 1921c58f1c22SToby Isaac if (nroots >= 0) { 1922ad227feaSJunchao Zhang ierr = PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff,MPI_REPLACE);CHKERRQ(ierr); 1923ad227feaSJunchao Zhang ierr = PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff,MPI_REPLACE);CHKERRQ(ierr); 1924c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1925c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) {if (tmpOff[p] < 0) (*gsection)->atlasDof[p-pStart] = tmpOff[p];} 1926c58f1c22SToby Isaac } 1927c58f1c22SToby Isaac } 1928c58f1c22SToby Isaac /* Calculate new sizes, get proccess offset, and calculate point offsets */ 1929c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd-pStart; ++p) { 1930c58f1c22SToby Isaac cdof = (!includeConstraints && s->bc) ? s->bc->atlasDof[p] : 0; 1931c58f1c22SToby Isaac (*gsection)->atlasOff[p] = off; 1932c58f1c22SToby Isaac off += (*gsection)->atlasDof[p] > 0 ? (*gsection)->atlasDof[p]-cdof : 0; 1933c58f1c22SToby Isaac } 193455b25c41SPierre Jolivet ierr = MPI_Scan(&off, &globalOff, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject) s));CHKERRMPI(ierr); 1935c58f1c22SToby Isaac globalOff -= off; 1936c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd-pStart; ++p) { 1937c58f1c22SToby Isaac (*gsection)->atlasOff[p] += globalOff; 1938c58f1c22SToby Isaac if (neg) neg[p] = -((*gsection)->atlasOff[p]+1); 1939c58f1c22SToby Isaac } 1940c58f1c22SToby Isaac /* Put in negative offsets for ghost points */ 1941c58f1c22SToby Isaac if (nroots >= 0) { 1942ad227feaSJunchao Zhang ierr = PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff,MPI_REPLACE);CHKERRQ(ierr); 1943ad227feaSJunchao Zhang ierr = PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff,MPI_REPLACE);CHKERRQ(ierr); 1944c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1945c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) {if (tmpOff[p] < 0) (*gsection)->atlasOff[p-pStart] = tmpOff[p];} 1946c58f1c22SToby Isaac } 1947c58f1c22SToby Isaac } 1948c58f1c22SToby Isaac if (nroots >= 0 && nroots > pEnd-pStart) {ierr = PetscFree(tmpOff);CHKERRQ(ierr);} 1949c58f1c22SToby Isaac ierr = PetscFree(neg);CHKERRQ(ierr); 1950c58f1c22SToby Isaac PetscFunctionReturn(0); 1951c58f1c22SToby Isaac } 1952c58f1c22SToby Isaac 19535fdea053SToby Isaac typedef struct _n_PetscSectionSym_Label 19545fdea053SToby Isaac { 19555fdea053SToby Isaac DMLabel label; 19565fdea053SToby Isaac PetscCopyMode *modes; 19575fdea053SToby Isaac PetscInt *sizes; 19585fdea053SToby Isaac const PetscInt ***perms; 19595fdea053SToby Isaac const PetscScalar ***rots; 19605fdea053SToby Isaac PetscInt (*minMaxOrients)[2]; 19615fdea053SToby Isaac PetscInt numStrata; /* numStrata is only increasing, functions as a state */ 19625fdea053SToby Isaac } PetscSectionSym_Label; 19635fdea053SToby Isaac 19645fdea053SToby Isaac static PetscErrorCode PetscSectionSymLabelReset(PetscSectionSym sym) 19655fdea053SToby Isaac { 19665fdea053SToby Isaac PetscInt i, j; 19675fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *) sym->data; 19685fdea053SToby Isaac PetscErrorCode ierr; 19695fdea053SToby Isaac 19705fdea053SToby Isaac PetscFunctionBegin; 19715fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 19725fdea053SToby Isaac if (sl->modes[i] == PETSC_OWN_POINTER || sl->modes[i] == PETSC_COPY_VALUES) { 19735fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 19745fdea053SToby Isaac if (sl->perms[i]) {ierr = PetscFree(sl->perms[i][j]);CHKERRQ(ierr);} 19755fdea053SToby Isaac if (sl->rots[i]) {ierr = PetscFree(sl->rots[i][j]);CHKERRQ(ierr);} 19765fdea053SToby Isaac } 19775fdea053SToby Isaac if (sl->perms[i]) { 19785fdea053SToby Isaac const PetscInt **perms = &sl->perms[i][sl->minMaxOrients[i][0]]; 19795fdea053SToby Isaac 19805fdea053SToby Isaac ierr = PetscFree(perms);CHKERRQ(ierr); 19815fdea053SToby Isaac } 19825fdea053SToby Isaac if (sl->rots[i]) { 19835fdea053SToby Isaac const PetscScalar **rots = &sl->rots[i][sl->minMaxOrients[i][0]]; 19845fdea053SToby Isaac 19855fdea053SToby Isaac ierr = PetscFree(rots);CHKERRQ(ierr); 19865fdea053SToby Isaac } 19875fdea053SToby Isaac } 19885fdea053SToby Isaac } 19895fdea053SToby Isaac ierr = PetscFree5(sl->modes,sl->sizes,sl->perms,sl->rots,sl->minMaxOrients);CHKERRQ(ierr); 19905fdea053SToby Isaac ierr = DMLabelDestroy(&sl->label);CHKERRQ(ierr); 19915fdea053SToby Isaac sl->numStrata = 0; 19925fdea053SToby Isaac PetscFunctionReturn(0); 19935fdea053SToby Isaac } 19945fdea053SToby Isaac 19955fdea053SToby Isaac static PetscErrorCode PetscSectionSymDestroy_Label(PetscSectionSym sym) 19965fdea053SToby Isaac { 19975fdea053SToby Isaac PetscErrorCode ierr; 19985fdea053SToby Isaac 19995fdea053SToby Isaac PetscFunctionBegin; 20005fdea053SToby Isaac ierr = PetscSectionSymLabelReset(sym);CHKERRQ(ierr); 20015fdea053SToby Isaac ierr = PetscFree(sym->data);CHKERRQ(ierr); 20025fdea053SToby Isaac PetscFunctionReturn(0); 20035fdea053SToby Isaac } 20045fdea053SToby Isaac 20055fdea053SToby Isaac static PetscErrorCode PetscSectionSymView_Label(PetscSectionSym sym, PetscViewer viewer) 20065fdea053SToby Isaac { 20075fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *) sym->data; 20085fdea053SToby Isaac PetscBool isAscii; 20095fdea053SToby Isaac DMLabel label = sl->label; 2010d67d17b1SMatthew G. Knepley const char *name; 20115fdea053SToby Isaac PetscErrorCode ierr; 20125fdea053SToby Isaac 20135fdea053SToby Isaac PetscFunctionBegin; 20145fdea053SToby Isaac ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &isAscii);CHKERRQ(ierr); 20155fdea053SToby Isaac if (isAscii) { 20165fdea053SToby Isaac PetscInt i, j, k; 20175fdea053SToby Isaac PetscViewerFormat format; 20185fdea053SToby Isaac 20195fdea053SToby Isaac ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 20205fdea053SToby Isaac if (label) { 20215fdea053SToby Isaac ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 20225fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 20235fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 20245fdea053SToby Isaac ierr = DMLabelView(label, viewer);CHKERRQ(ierr); 20255fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 20265fdea053SToby Isaac } else { 2027d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) sl->label, &name);CHKERRQ(ierr); 2028d67d17b1SMatthew G. Knepley ierr = PetscViewerASCIIPrintf(viewer," Label '%s'\n",name);CHKERRQ(ierr); 20295fdea053SToby Isaac } 20305fdea053SToby Isaac } else { 20315fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "No label given\n");CHKERRQ(ierr); 20325fdea053SToby Isaac } 20335fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 20345fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 20355fdea053SToby Isaac PetscInt value = i < sl->numStrata ? label->stratumValues[i] : label->defaultValue; 20365fdea053SToby Isaac 20375fdea053SToby Isaac if (!(sl->perms[i] || sl->rots[i])) { 20385fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %D (%D dofs per point): no symmetries\n", value, sl->sizes[i]);CHKERRQ(ierr); 20395fdea053SToby Isaac } else { 20405fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %D (%D dofs per point):\n", value, sl->sizes[i]);CHKERRQ(ierr); 20415fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 20425fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation range: [%D, %D)\n", sl->minMaxOrients[i][0], sl->minMaxOrients[i][1]);CHKERRQ(ierr); 20435fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 20445fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 20455fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 20465fdea053SToby Isaac if (!((sl->perms[i] && sl->perms[i][j]) || (sl->rots[i] && sl->rots[i][j]))) { 20475fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation %D: identity\n",j);CHKERRQ(ierr); 20485fdea053SToby Isaac } else { 20495fdea053SToby Isaac PetscInt tab; 20505fdea053SToby Isaac 20515fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation %D:\n",j);CHKERRQ(ierr); 20525fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 20535fdea053SToby Isaac ierr = PetscViewerASCIIGetTab(viewer,&tab);CHKERRQ(ierr); 20545fdea053SToby Isaac if (sl->perms[i] && sl->perms[i][j]) { 20555fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"Permutation:");CHKERRQ(ierr); 20565fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,0);CHKERRQ(ierr); 20575fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %D",sl->perms[i][j][k]);CHKERRQ(ierr);} 20585fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"\n");CHKERRQ(ierr); 20595fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,tab);CHKERRQ(ierr); 20605fdea053SToby Isaac } 20615fdea053SToby Isaac if (sl->rots[i] && sl->rots[i][j]) { 20625fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"Rotations: ");CHKERRQ(ierr); 20635fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,0);CHKERRQ(ierr); 20645fdea053SToby Isaac #if defined(PETSC_USE_COMPLEX) 20655fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %+f+i*%+f",PetscRealPart(sl->rots[i][j][k]),PetscImaginaryPart(sl->rots[i][j][k]));CHKERRQ(ierr);} 20665fdea053SToby Isaac #else 20675fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %+f",sl->rots[i][j][k]);CHKERRQ(ierr);} 20685fdea053SToby Isaac #endif 20695fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"\n");CHKERRQ(ierr); 20705fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,tab);CHKERRQ(ierr); 20715fdea053SToby Isaac } 20725fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 20735fdea053SToby Isaac } 20745fdea053SToby Isaac } 20755fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 20765fdea053SToby Isaac } 20775fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 20785fdea053SToby Isaac } 20795fdea053SToby Isaac } 20805fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 20815fdea053SToby Isaac } 20825fdea053SToby Isaac PetscFunctionReturn(0); 20835fdea053SToby Isaac } 20845fdea053SToby Isaac 20855fdea053SToby Isaac /*@ 20865fdea053SToby Isaac PetscSectionSymLabelSetLabel - set the label whose strata will define the points that receive symmetries 20875fdea053SToby Isaac 20885fdea053SToby Isaac Logically collective on sym 20895fdea053SToby Isaac 20905fdea053SToby Isaac Input parameters: 20915fdea053SToby Isaac + sym - the section symmetries 20925fdea053SToby Isaac - label - the DMLabel describing the types of points 20935fdea053SToby Isaac 20945fdea053SToby Isaac Level: developer: 20955fdea053SToby Isaac 20965fdea053SToby Isaac .seealso: PetscSectionSymLabelSetStratum(), PetscSectionSymCreateLabel(), PetscSectionGetPointSyms() 20975fdea053SToby Isaac @*/ 20985fdea053SToby Isaac PetscErrorCode PetscSectionSymLabelSetLabel(PetscSectionSym sym, DMLabel label) 20995fdea053SToby Isaac { 21005fdea053SToby Isaac PetscSectionSym_Label *sl; 21015fdea053SToby Isaac PetscErrorCode ierr; 21025fdea053SToby Isaac 21035fdea053SToby Isaac PetscFunctionBegin; 21045fdea053SToby Isaac PetscValidHeaderSpecific(sym,PETSC_SECTION_SYM_CLASSID,1); 21055fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 21065fdea053SToby Isaac if (sl->label && sl->label != label) {ierr = PetscSectionSymLabelReset(sym);CHKERRQ(ierr);} 21075fdea053SToby Isaac if (label) { 21085fdea053SToby Isaac sl->label = label; 2109d67d17b1SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) label);CHKERRQ(ierr); 21105fdea053SToby Isaac ierr = DMLabelGetNumValues(label,&sl->numStrata);CHKERRQ(ierr); 21111a834cf9SToby Isaac ierr = PetscMalloc5(sl->numStrata+1,&sl->modes,sl->numStrata+1,&sl->sizes,sl->numStrata+1,&sl->perms,sl->numStrata+1,&sl->rots,sl->numStrata+1,&sl->minMaxOrients);CHKERRQ(ierr); 21121a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->modes,(sl->numStrata+1)*sizeof(PetscCopyMode));CHKERRQ(ierr); 21131a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->sizes,(sl->numStrata+1)*sizeof(PetscInt));CHKERRQ(ierr); 21141a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->perms,(sl->numStrata+1)*sizeof(const PetscInt **));CHKERRQ(ierr); 21151a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->rots,(sl->numStrata+1)*sizeof(const PetscScalar **));CHKERRQ(ierr); 21161a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->minMaxOrients,(sl->numStrata+1)*sizeof(PetscInt[2]));CHKERRQ(ierr); 21175fdea053SToby Isaac } 21185fdea053SToby Isaac PetscFunctionReturn(0); 21195fdea053SToby Isaac } 21205fdea053SToby Isaac 21215fdea053SToby Isaac /*@C 21225fdea053SToby Isaac PetscSectionSymLabelSetStratum - set the symmetries for the orientations of a stratum 21235fdea053SToby Isaac 21245b5e7992SMatthew G. Knepley Logically collective on sym 21255fdea053SToby Isaac 21265fdea053SToby Isaac InputParameters: 21275b5e7992SMatthew G. Knepley + sym - the section symmetries 21285fdea053SToby Isaac . stratum - the stratum value in the label that we are assigning symmetries for 21295fdea053SToby Isaac . size - the number of dofs for points in the stratum of the label 21305fdea053SToby Isaac . minOrient - the smallest orientation for a point in this stratum 21315fdea053SToby Isaac . maxOrient - one greater than the largest orientation for a ppoint in this stratum (i.e., orientations are in the range [minOrient, maxOrient)) 21325fdea053SToby Isaac . mode - how sym should copy the perms and rots arrays 21335fdea053SToby Isaac . perms - NULL if there are no permutations, or (maxOrient - minOrient) permutations, one for each orientation. A NULL permutation is the identity 2134a2b725a8SWilliam Gropp - rots - NULL if there are no rotations, or (maxOrient - minOrient) sets of rotations, one for each orientation. A NULL set of orientations is the identity 21355fdea053SToby Isaac 21365fdea053SToby Isaac Level: developer 21375fdea053SToby Isaac 21385fdea053SToby Isaac .seealso: PetscSectionSymCreate(), PetscSectionSetSym(), PetscSectionGetPointSyms(), PetscSectionSymCreateLabel() 21395fdea053SToby Isaac @*/ 21405fdea053SToby Isaac PetscErrorCode PetscSectionSymLabelSetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt size, PetscInt minOrient, PetscInt maxOrient, PetscCopyMode mode, const PetscInt **perms, const PetscScalar **rots) 21415fdea053SToby Isaac { 21425fdea053SToby Isaac PetscSectionSym_Label *sl; 2143d67d17b1SMatthew G. Knepley const char *name; 2144d67d17b1SMatthew G. Knepley PetscInt i, j, k; 21455fdea053SToby Isaac PetscErrorCode ierr; 21465fdea053SToby Isaac 21475fdea053SToby Isaac PetscFunctionBegin; 21485fdea053SToby Isaac PetscValidHeaderSpecific(sym,PETSC_SECTION_SYM_CLASSID,1); 21495fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 21505fdea053SToby Isaac if (!sl->label) SETERRQ(PetscObjectComm((PetscObject)sym),PETSC_ERR_ARG_WRONGSTATE,"No label set yet"); 21515fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 21525fdea053SToby Isaac PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 21535fdea053SToby Isaac 21545fdea053SToby Isaac if (stratum == value) break; 21555fdea053SToby Isaac } 2156d67d17b1SMatthew G. Knepley ierr = PetscObjectGetName((PetscObject) sl->label, &name);CHKERRQ(ierr); 2157d67d17b1SMatthew G. Knepley if (i > sl->numStrata) SETERRQ2(PetscObjectComm((PetscObject)sym),PETSC_ERR_ARG_OUTOFRANGE,"Stratum %D not found in label %s\n",stratum,name); 21585fdea053SToby Isaac sl->sizes[i] = size; 21595fdea053SToby Isaac sl->modes[i] = mode; 21605fdea053SToby Isaac sl->minMaxOrients[i][0] = minOrient; 21615fdea053SToby Isaac sl->minMaxOrients[i][1] = maxOrient; 21625fdea053SToby Isaac if (mode == PETSC_COPY_VALUES) { 21635fdea053SToby Isaac if (perms) { 21645fdea053SToby Isaac PetscInt **ownPerms; 21655fdea053SToby Isaac 21665fdea053SToby Isaac ierr = PetscCalloc1(maxOrient - minOrient,&ownPerms);CHKERRQ(ierr); 21675fdea053SToby Isaac for (j = 0; j < maxOrient-minOrient; j++) { 21685fdea053SToby Isaac if (perms[j]) { 21695fdea053SToby Isaac ierr = PetscMalloc1(size,&ownPerms[j]);CHKERRQ(ierr); 21705fdea053SToby Isaac for (k = 0; k < size; k++) {ownPerms[j][k] = perms[j][k];} 21715fdea053SToby Isaac } 21725fdea053SToby Isaac } 21735fdea053SToby Isaac sl->perms[i] = (const PetscInt **) &ownPerms[-minOrient]; 21745fdea053SToby Isaac } 21755fdea053SToby Isaac if (rots) { 21765fdea053SToby Isaac PetscScalar **ownRots; 21775fdea053SToby Isaac 21785fdea053SToby Isaac ierr = PetscCalloc1(maxOrient - minOrient,&ownRots);CHKERRQ(ierr); 21795fdea053SToby Isaac for (j = 0; j < maxOrient-minOrient; j++) { 21805fdea053SToby Isaac if (rots[j]) { 21815fdea053SToby Isaac ierr = PetscMalloc1(size,&ownRots[j]);CHKERRQ(ierr); 21825fdea053SToby Isaac for (k = 0; k < size; k++) {ownRots[j][k] = rots[j][k];} 21835fdea053SToby Isaac } 21845fdea053SToby Isaac } 21855fdea053SToby Isaac sl->rots[i] = (const PetscScalar **) &ownRots[-minOrient]; 21865fdea053SToby Isaac } 21875fdea053SToby Isaac } else { 21885fdea053SToby Isaac sl->perms[i] = perms ? &perms[-minOrient] : NULL; 21895fdea053SToby Isaac sl->rots[i] = rots ? &rots[-minOrient] : NULL; 21905fdea053SToby Isaac } 21915fdea053SToby Isaac PetscFunctionReturn(0); 21925fdea053SToby Isaac } 21935fdea053SToby Isaac 21945fdea053SToby Isaac static PetscErrorCode PetscSectionSymGetPoints_Label(PetscSectionSym sym, PetscSection section, PetscInt numPoints, const PetscInt *points, const PetscInt **perms, const PetscScalar **rots) 21955fdea053SToby Isaac { 21965fdea053SToby Isaac PetscInt i, j, numStrata; 21975fdea053SToby Isaac PetscSectionSym_Label *sl; 21985fdea053SToby Isaac DMLabel label; 21995fdea053SToby Isaac PetscErrorCode ierr; 22005fdea053SToby Isaac 22015fdea053SToby Isaac PetscFunctionBegin; 22025fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 22035fdea053SToby Isaac numStrata = sl->numStrata; 22045fdea053SToby Isaac label = sl->label; 22055fdea053SToby Isaac for (i = 0; i < numPoints; i++) { 22065fdea053SToby Isaac PetscInt point = points[2*i]; 22075fdea053SToby Isaac PetscInt ornt = points[2*i+1]; 22085fdea053SToby Isaac 22095fdea053SToby Isaac for (j = 0; j < numStrata; j++) { 22105fdea053SToby Isaac if (label->validIS[j]) { 22115fdea053SToby Isaac PetscInt k; 22125fdea053SToby Isaac 22135fdea053SToby Isaac ierr = ISLocate(label->points[j],point,&k);CHKERRQ(ierr); 22145fdea053SToby Isaac if (k >= 0) break; 22155fdea053SToby Isaac } else { 22165fdea053SToby Isaac PetscBool has; 22175fdea053SToby Isaac 2218b9907514SLisandro Dalcin ierr = PetscHSetIHas(label->ht[j], point, &has);CHKERRQ(ierr); 22195fdea053SToby Isaac if (has) break; 22205fdea053SToby Isaac } 22215fdea053SToby Isaac } 22225fdea053SToby Isaac if ((sl->minMaxOrients[j][1] > sl->minMaxOrients[j][0]) && (ornt < sl->minMaxOrients[j][0] || ornt >= sl->minMaxOrients[j][1])) SETERRQ5(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"point %D orientation %D not in range [%D, %D) for stratum %D",point,ornt,sl->minMaxOrients[j][0],sl->minMaxOrients[j][1],j < numStrata ? label->stratumValues[j] : label->defaultValue); 22235fdea053SToby Isaac if (perms) {perms[i] = sl->perms[j] ? sl->perms[j][ornt] : NULL;} 22245fdea053SToby Isaac if (rots) {rots[i] = sl->rots[j] ? sl->rots[j][ornt] : NULL;} 22255fdea053SToby Isaac } 22265fdea053SToby Isaac PetscFunctionReturn(0); 22275fdea053SToby Isaac } 22285fdea053SToby Isaac 22295fdea053SToby Isaac PetscErrorCode PetscSectionSymCreate_Label(PetscSectionSym sym) 22305fdea053SToby Isaac { 22315fdea053SToby Isaac PetscSectionSym_Label *sl; 22325fdea053SToby Isaac PetscErrorCode ierr; 22335fdea053SToby Isaac 22345fdea053SToby Isaac PetscFunctionBegin; 22355fdea053SToby Isaac ierr = PetscNewLog(sym,&sl);CHKERRQ(ierr); 22365fdea053SToby Isaac sym->ops->getpoints = PetscSectionSymGetPoints_Label; 22375fdea053SToby Isaac sym->ops->view = PetscSectionSymView_Label; 22385fdea053SToby Isaac sym->ops->destroy = PetscSectionSymDestroy_Label; 22395fdea053SToby Isaac sym->data = (void *) sl; 22405fdea053SToby Isaac PetscFunctionReturn(0); 22415fdea053SToby Isaac } 22425fdea053SToby Isaac 22435fdea053SToby Isaac /*@ 22445fdea053SToby Isaac PetscSectionSymCreateLabel - Create a section symmetry that assigns one symmetry to each stratum of a label 22455fdea053SToby Isaac 22465fdea053SToby Isaac Collective 22475fdea053SToby Isaac 22485fdea053SToby Isaac Input Parameters: 22495fdea053SToby Isaac + comm - the MPI communicator for the new symmetry 22505fdea053SToby Isaac - label - the label defining the strata 22515fdea053SToby Isaac 22525fdea053SToby Isaac Output Parameters: 22535fdea053SToby Isaac . sym - the section symmetries 22545fdea053SToby Isaac 22555fdea053SToby Isaac Level: developer 22565fdea053SToby Isaac 22575fdea053SToby Isaac .seealso: PetscSectionSymCreate(), PetscSectionSetSym(), PetscSectionGetSym(), PetscSectionSymLabelSetStratum(), PetscSectionGetPointSyms() 22585fdea053SToby Isaac @*/ 22595fdea053SToby Isaac PetscErrorCode PetscSectionSymCreateLabel(MPI_Comm comm, DMLabel label, PetscSectionSym *sym) 22605fdea053SToby Isaac { 22615fdea053SToby Isaac PetscErrorCode ierr; 22625fdea053SToby Isaac 22635fdea053SToby Isaac PetscFunctionBegin; 22645fdea053SToby Isaac ierr = DMInitializePackage();CHKERRQ(ierr); 22655fdea053SToby Isaac ierr = PetscSectionSymCreate(comm,sym);CHKERRQ(ierr); 22665fdea053SToby Isaac ierr = PetscSectionSymSetType(*sym,PETSCSECTIONSYMLABEL);CHKERRQ(ierr); 22675fdea053SToby Isaac ierr = PetscSectionSymLabelSetLabel(*sym,label);CHKERRQ(ierr); 22685fdea053SToby Isaac PetscFunctionReturn(0); 22695fdea053SToby Isaac } 2270