15fdea053SToby Isaac #include <petscdm.h> 2c58f1c22SToby Isaac #include <petsc/private/dmlabelimpl.h> /*I "petscdmlabel.h" I*/ 3ea844a1aSMatthew Knepley #include <petsc/private/sectionimpl.h> /*I "petscsection.h" I*/ 4c58f1c22SToby Isaac #include <petscsf.h> 5ea844a1aSMatthew Knepley #include <petscsection.h> 6c58f1c22SToby Isaac 79f6c5813SMatthew G. Knepley PetscFunctionList DMLabelList = NULL; 89f6c5813SMatthew G. Knepley PetscBool DMLabelRegisterAllCalled = PETSC_FALSE; 99f6c5813SMatthew G. Knepley 10cc4c1da9SBarry Smith /*@ 1120f4b53cSBarry Smith DMLabelCreate - Create a `DMLabel` object, which is a multimap 12c58f1c22SToby Isaac 135b5e7992SMatthew G. Knepley Collective 145b5e7992SMatthew G. Knepley 1560225df5SJacob Faibussowitsch Input Parameters: 1620f4b53cSBarry Smith + comm - The communicator, usually `PETSC_COMM_SELF` 17d67d17b1SMatthew G. Knepley - name - The label name 18c58f1c22SToby Isaac 1960225df5SJacob Faibussowitsch Output Parameter: 2020f4b53cSBarry Smith . label - The `DMLabel` 21c58f1c22SToby Isaac 22c58f1c22SToby Isaac Level: beginner 23c58f1c22SToby Isaac 2405ab7a9fSVaclav Hapla Notes: 2520f4b53cSBarry Smith The label name is actually usually the `PetscObject` name. 2620f4b53cSBarry Smith One can get/set it with `PetscObjectGetName()`/`PetscObjectSetName()`. 2705ab7a9fSVaclav Hapla 2820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDestroy()` 29c58f1c22SToby Isaac @*/ 30d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCreate(MPI_Comm comm, const char name[], DMLabel *label) 31d71ae5a4SJacob Faibussowitsch { 32c58f1c22SToby Isaac PetscFunctionBegin; 334f572ea9SToby Isaac PetscAssertPointer(label, 3); 349566063dSJacob Faibussowitsch PetscCall(DMInitializePackage()); 35c58f1c22SToby Isaac 369566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(*label, DMLABEL_CLASSID, "DMLabel", "DMLabel", "DM", comm, DMLabelDestroy, DMLabelView)); 37c58f1c22SToby Isaac (*label)->numStrata = 0; 385aa44df4SToby Isaac (*label)->defaultValue = -1; 39c58f1c22SToby Isaac (*label)->stratumValues = NULL; 40ad8374ffSToby Isaac (*label)->validIS = NULL; 41c58f1c22SToby Isaac (*label)->stratumSizes = NULL; 42c58f1c22SToby Isaac (*label)->points = NULL; 43c58f1c22SToby Isaac (*label)->ht = NULL; 44c58f1c22SToby Isaac (*label)->pStart = -1; 45c58f1c22SToby Isaac (*label)->pEnd = -1; 46c58f1c22SToby Isaac (*label)->bt = NULL; 479566063dSJacob Faibussowitsch PetscCall(PetscHMapICreate(&(*label)->hmap)); 489566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)*label, name)); 499f6c5813SMatthew G. Knepley PetscCall(DMLabelSetType(*label, DMLABELCONCRETE)); 503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 519f6c5813SMatthew G. Knepley } 529f6c5813SMatthew G. Knepley 53cc4c1da9SBarry Smith /*@ 549f6c5813SMatthew G. Knepley DMLabelSetUp - SetUp a `DMLabel` object 559f6c5813SMatthew G. Knepley 569f6c5813SMatthew G. Knepley Collective 579f6c5813SMatthew G. Knepley 5860225df5SJacob Faibussowitsch Input Parameters: 599f6c5813SMatthew G. Knepley . label - The `DMLabel` 609f6c5813SMatthew G. Knepley 619f6c5813SMatthew G. Knepley Level: intermediate 629f6c5813SMatthew G. Knepley 6320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 649f6c5813SMatthew G. Knepley @*/ 659f6c5813SMatthew G. Knepley PetscErrorCode DMLabelSetUp(DMLabel label) 669f6c5813SMatthew G. Knepley { 679f6c5813SMatthew G. Knepley PetscFunctionBegin; 689f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 699f6c5813SMatthew G. Knepley PetscTryTypeMethod(label, setup); 703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 71c58f1c22SToby Isaac } 72c58f1c22SToby Isaac 73c58f1c22SToby Isaac /* 74c58f1c22SToby Isaac DMLabelMakeValid_Private - Transfer stratum data from the hash format to the sorted list format 75c58f1c22SToby Isaac 765b5e7992SMatthew G. Knepley Not collective 775b5e7992SMatthew G. Knepley 78c58f1c22SToby Isaac Input parameter: 7920f4b53cSBarry Smith + label - The `DMLabel` 80c58f1c22SToby Isaac - v - The stratum value 81c58f1c22SToby Isaac 82c58f1c22SToby Isaac Output parameter: 8320f4b53cSBarry Smith . label - The `DMLabel` with stratum in sorted list format 84c58f1c22SToby Isaac 85c58f1c22SToby Isaac Level: developer 86c58f1c22SToby Isaac 8720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 88c58f1c22SToby Isaac */ 89d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeValid_Private(DMLabel label, PetscInt v) 90d71ae5a4SJacob Faibussowitsch { 91277ea44aSLisandro Dalcin IS is; 92b9907514SLisandro Dalcin PetscInt off = 0, *pointArray, p; 93c58f1c22SToby Isaac 94c58f1c22SToby Isaac PetscFunctionBegin; 954d86920dSPierre Jolivet if ((PetscLikely(v >= 0 && v < label->numStrata) && label->validIS[v]) || label->readonly) PetscFunctionReturn(PETSC_SUCCESS); 961dca8a05SBarry Smith PetscCheck(v >= 0 && v < label->numStrata, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %" PetscInt_FMT " in DMLabelMakeValid_Private", v); 979566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(label->ht[v], &label->stratumSizes[v])); 989566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->stratumSizes[v], &pointArray)); 999566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetElems(label->ht[v], &off, pointArray)); 1009566063dSJacob Faibussowitsch PetscCall(PetscHSetIClear(label->ht[v])); 1019566063dSJacob Faibussowitsch PetscCall(PetscSortInt(label->stratumSizes[v], pointArray)); 102c58f1c22SToby Isaac if (label->bt) { 103c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 104ad8374ffSToby Isaac const PetscInt point = pointArray[p]; 10563a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 1069566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - label->pStart)); 107c58f1c22SToby Isaac } 108c58f1c22SToby Isaac } 109ba2698f1SMatthew G. Knepley if (label->stratumSizes[v] > 0 && pointArray[label->stratumSizes[v] - 1] == pointArray[0] + label->stratumSizes[v] - 1) { 1109566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, label->stratumSizes[v], pointArray[0], 1, &is)); 1119566063dSJacob Faibussowitsch PetscCall(PetscFree(pointArray)); 112ba2698f1SMatthew G. Knepley } else { 1139566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->stratumSizes[v], pointArray, PETSC_OWN_POINTER, &is)); 114ba2698f1SMatthew G. Knepley } 115f622de60SMatthew G. Knepley PetscCall(ISSetInfo(is, IS_SORTED, IS_LOCAL, PETSC_TRUE, PETSC_TRUE)); 1169566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)is, "indices")); 117277ea44aSLisandro Dalcin label->points[v] = is; 118ad8374ffSToby Isaac label->validIS[v] = PETSC_TRUE; 1199566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 1203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121c58f1c22SToby Isaac } 122c58f1c22SToby Isaac 123c58f1c22SToby Isaac /* 124c58f1c22SToby Isaac DMLabelMakeAllValid_Private - Transfer all strata from the hash format to the sorted list format 125c58f1c22SToby Isaac 12620f4b53cSBarry Smith Not Collective 1275b5e7992SMatthew G. Knepley 128c58f1c22SToby Isaac Input parameter: 12920f4b53cSBarry Smith . label - The `DMLabel` 130c58f1c22SToby Isaac 131c58f1c22SToby Isaac Output parameter: 13220f4b53cSBarry Smith . label - The `DMLabel` with all strata in sorted list format 133c58f1c22SToby Isaac 134c58f1c22SToby Isaac Level: developer 135c58f1c22SToby Isaac 13620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 137c58f1c22SToby Isaac */ 138d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeAllValid_Private(DMLabel label) 139d71ae5a4SJacob Faibussowitsch { 140c58f1c22SToby Isaac PetscInt v; 141c58f1c22SToby Isaac 142c58f1c22SToby Isaac PetscFunctionBegin; 14348a46eb9SPierre Jolivet for (v = 0; v < label->numStrata; v++) PetscCall(DMLabelMakeValid_Private(label, v)); 1443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145c58f1c22SToby Isaac } 146c58f1c22SToby Isaac 147c58f1c22SToby Isaac /* 148c58f1c22SToby Isaac DMLabelMakeInvalid_Private - Transfer stratum data from the sorted list format to the hash format 149c58f1c22SToby Isaac 15020f4b53cSBarry Smith Not Collective 1515b5e7992SMatthew G. Knepley 152c58f1c22SToby Isaac Input parameter: 15320f4b53cSBarry Smith + label - The `DMLabel` 154c58f1c22SToby Isaac - v - The stratum value 155c58f1c22SToby Isaac 156c58f1c22SToby Isaac Output parameter: 15720f4b53cSBarry Smith . label - The `DMLabel` with stratum in hash format 158c58f1c22SToby Isaac 159c58f1c22SToby Isaac Level: developer 160c58f1c22SToby Isaac 16120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 162c58f1c22SToby Isaac */ 163d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeInvalid_Private(DMLabel label, PetscInt v) 164d71ae5a4SJacob Faibussowitsch { 165c58f1c22SToby Isaac PetscInt p; 166ad8374ffSToby Isaac const PetscInt *points; 167c58f1c22SToby Isaac 168c58f1c22SToby Isaac PetscFunctionBegin; 1694d86920dSPierre Jolivet if ((PetscLikely(v >= 0 && v < label->numStrata) && !label->validIS[v]) || label->readonly) PetscFunctionReturn(PETSC_SUCCESS); 1701dca8a05SBarry Smith PetscCheck(v >= 0 && v < label->numStrata, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %" PetscInt_FMT " in DMLabelMakeInvalid_Private", v); 171ad8374ffSToby Isaac if (label->points[v]) { 1729566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 17348a46eb9SPierre Jolivet for (p = 0; p < label->stratumSizes[v]; ++p) PetscCall(PetscHSetIAdd(label->ht[v], points[p])); 1749566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 175f4f49eeaSPierre Jolivet PetscCall(ISDestroy(&label->points[v])); 176ad8374ffSToby Isaac } 177ad8374ffSToby Isaac label->validIS[v] = PETSC_FALSE; 1783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 179c58f1c22SToby Isaac } 180c58f1c22SToby Isaac 181d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelMakeAllInvalid_Internal(DMLabel label) 182d71ae5a4SJacob Faibussowitsch { 183695799ffSMatthew G. Knepley PetscInt v; 184695799ffSMatthew G. Knepley 185695799ffSMatthew G. Knepley PetscFunctionBegin; 18648a46eb9SPierre Jolivet for (v = 0; v < label->numStrata; v++) PetscCall(DMLabelMakeInvalid_Private(label, v)); 1873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 188695799ffSMatthew G. Knepley } 189695799ffSMatthew G. Knepley 190b9907514SLisandro Dalcin #if !defined(DMLABEL_LOOKUP_THRESHOLD) 191b9907514SLisandro Dalcin #define DMLABEL_LOOKUP_THRESHOLD 16 192b9907514SLisandro Dalcin #endif 193b9907514SLisandro Dalcin 1949f6c5813SMatthew G. Knepley PetscErrorCode DMLabelLookupStratum(DMLabel label, PetscInt value, PetscInt *index) 195d71ae5a4SJacob Faibussowitsch { 1960c3c4a36SLisandro Dalcin PetscInt v; 1970e79e033SBarry Smith 1980c3c4a36SLisandro Dalcin PetscFunctionBegin; 1990e79e033SBarry Smith *index = -1; 2009f6c5813SMatthew G. Knepley if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD || label->readonly) { 201b9907514SLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 2029371c9d4SSatish Balay if (label->stratumValues[v] == value) { 2039371c9d4SSatish Balay *index = v; 2049371c9d4SSatish Balay break; 2059371c9d4SSatish Balay } 206b9907514SLisandro Dalcin } else { 2079566063dSJacob Faibussowitsch PetscCall(PetscHMapIGet(label->hmap, value, index)); 2080e79e033SBarry Smith } 2099f6c5813SMatthew G. Knepley if (PetscDefined(USE_DEBUG) && !label->readonly) { /* Check strata hash map consistency */ 21090e9b2aeSLisandro Dalcin PetscInt len, loc = -1; 2119566063dSJacob Faibussowitsch PetscCall(PetscHMapIGetSize(label->hmap, &len)); 21208401ef6SPierre Jolivet PetscCheck(len == label->numStrata, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map size"); 21390e9b2aeSLisandro Dalcin if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD) { 2149566063dSJacob Faibussowitsch PetscCall(PetscHMapIGet(label->hmap, value, &loc)); 21590e9b2aeSLisandro Dalcin } else { 21690e9b2aeSLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 2179371c9d4SSatish Balay if (label->stratumValues[v] == value) { 2189371c9d4SSatish Balay loc = v; 2199371c9d4SSatish Balay break; 2209371c9d4SSatish Balay } 22190e9b2aeSLisandro Dalcin } 22208401ef6SPierre Jolivet PetscCheck(loc == *index, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map lookup"); 22390e9b2aeSLisandro Dalcin } 2243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2250c3c4a36SLisandro Dalcin } 2260c3c4a36SLisandro Dalcin 227d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode DMLabelNewStratum(DMLabel label, PetscInt value, PetscInt *index) 228d71ae5a4SJacob Faibussowitsch { 229b9907514SLisandro Dalcin PetscInt v; 230b9907514SLisandro Dalcin PetscInt *tmpV; 231b9907514SLisandro Dalcin PetscInt *tmpS; 232b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 233b9907514SLisandro Dalcin IS *tmpP, is; 234c58f1c22SToby Isaac PetscBool *tmpB; 235b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 236c58f1c22SToby Isaac 237c58f1c22SToby Isaac PetscFunctionBegin; 238b9907514SLisandro Dalcin v = label->numStrata; 239b9907514SLisandro Dalcin tmpV = label->stratumValues; 240b9907514SLisandro Dalcin tmpS = label->stratumSizes; 241b9907514SLisandro Dalcin tmpH = label->ht; 242b9907514SLisandro Dalcin tmpP = label->points; 243b9907514SLisandro Dalcin tmpB = label->validIS; 2448e1f8cf0SLisandro Dalcin { /* TODO: PetscRealloc() is broken, use malloc+memcpy+free */ 2458e1f8cf0SLisandro Dalcin PetscInt *oldV = tmpV; 2468e1f8cf0SLisandro Dalcin PetscInt *oldS = tmpS; 2478e1f8cf0SLisandro Dalcin PetscHSetI *oldH = tmpH; 2488e1f8cf0SLisandro Dalcin IS *oldP = tmpP; 2498e1f8cf0SLisandro Dalcin PetscBool *oldB = tmpB; 2509566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpV), &tmpV)); 2519566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpS), &tmpS)); 2529f6c5813SMatthew G. Knepley PetscCall(PetscCalloc((v + 1) * sizeof(*tmpH), &tmpH)); 2539f6c5813SMatthew G. Knepley PetscCall(PetscCalloc((v + 1) * sizeof(*tmpP), &tmpP)); 2549566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpB), &tmpB)); 2559566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpV, oldV, v)); 2569566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpS, oldS, v)); 2579566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpH, oldH, v)); 2589566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpP, oldP, v)); 2599566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpB, oldB, v)); 2609566063dSJacob Faibussowitsch PetscCall(PetscFree(oldV)); 2619566063dSJacob Faibussowitsch PetscCall(PetscFree(oldS)); 2629566063dSJacob Faibussowitsch PetscCall(PetscFree(oldH)); 2639566063dSJacob Faibussowitsch PetscCall(PetscFree(oldP)); 2649566063dSJacob Faibussowitsch PetscCall(PetscFree(oldB)); 2658e1f8cf0SLisandro Dalcin } 266b9907514SLisandro Dalcin label->numStrata = v + 1; 267c58f1c22SToby Isaac label->stratumValues = tmpV; 268c58f1c22SToby Isaac label->stratumSizes = tmpS; 269c58f1c22SToby Isaac label->ht = tmpH; 270c58f1c22SToby Isaac label->points = tmpP; 271ad8374ffSToby Isaac label->validIS = tmpB; 2729566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&ht)); 2739566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &is)); 2749566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(hmap, value, v)); 275b9907514SLisandro Dalcin tmpV[v] = value; 276b9907514SLisandro Dalcin tmpS[v] = 0; 277b9907514SLisandro Dalcin tmpH[v] = ht; 278b9907514SLisandro Dalcin tmpP[v] = is; 279b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 2809566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 2810c3c4a36SLisandro Dalcin *index = v; 2823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2830c3c4a36SLisandro Dalcin } 2840c3c4a36SLisandro Dalcin 285d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode DMLabelLookupAddStratum(DMLabel label, PetscInt value, PetscInt *index) 286d71ae5a4SJacob Faibussowitsch { 287b9907514SLisandro Dalcin PetscFunctionBegin; 2889566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, index)); 2899566063dSJacob Faibussowitsch if (*index < 0) PetscCall(DMLabelNewStratum(label, value, index)); 2903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 291b9907514SLisandro Dalcin } 292b9907514SLisandro Dalcin 2939f6c5813SMatthew G. Knepley PetscErrorCode DMLabelGetStratumSize_Private(DMLabel label, PetscInt v, PetscInt *size) 294d71ae5a4SJacob Faibussowitsch { 2959e63cc69SVaclav Hapla PetscFunctionBegin; 2969e63cc69SVaclav Hapla *size = 0; 2973ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 2989f6c5813SMatthew G. Knepley if (label->readonly || label->validIS[v]) { 2999e63cc69SVaclav Hapla *size = label->stratumSizes[v]; 3009e63cc69SVaclav Hapla } else { 3019566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(label->ht[v], size)); 3029e63cc69SVaclav Hapla } 3033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3049e63cc69SVaclav Hapla } 3059e63cc69SVaclav Hapla 306b9907514SLisandro Dalcin /*@ 30720f4b53cSBarry Smith DMLabelAddStratum - Adds a new stratum value in a `DMLabel` 308b9907514SLisandro Dalcin 309d8d19677SJose E. Roman Input Parameters: 31020f4b53cSBarry Smith + label - The `DMLabel` 311b9907514SLisandro Dalcin - value - The stratum value 312b9907514SLisandro Dalcin 313b9907514SLisandro Dalcin Level: beginner 314b9907514SLisandro Dalcin 31520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 316b9907514SLisandro Dalcin @*/ 317d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStratum(DMLabel label, PetscInt value) 318d71ae5a4SJacob Faibussowitsch { 3190c3c4a36SLisandro Dalcin PetscInt v; 3200c3c4a36SLisandro Dalcin 3210c3c4a36SLisandro Dalcin PetscFunctionBegin; 322d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 3239f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 3249566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 3253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 326b9907514SLisandro Dalcin } 327b9907514SLisandro Dalcin 328b9907514SLisandro Dalcin /*@ 32920f4b53cSBarry Smith DMLabelAddStrata - Adds new stratum values in a `DMLabel` 330b9907514SLisandro Dalcin 33120f4b53cSBarry Smith Not Collective 3325b5e7992SMatthew G. Knepley 333d8d19677SJose E. Roman Input Parameters: 33420f4b53cSBarry Smith + label - The `DMLabel` 335b9907514SLisandro Dalcin . numStrata - The number of stratum values 336b9907514SLisandro Dalcin - stratumValues - The stratum values 337b9907514SLisandro Dalcin 338b9907514SLisandro Dalcin Level: beginner 339b9907514SLisandro Dalcin 34020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 341b9907514SLisandro Dalcin @*/ 342d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStrata(DMLabel label, PetscInt numStrata, const PetscInt stratumValues[]) 343d71ae5a4SJacob Faibussowitsch { 344b9907514SLisandro Dalcin PetscInt *values, v; 345b9907514SLisandro Dalcin 346b9907514SLisandro Dalcin PetscFunctionBegin; 347b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 3484f572ea9SToby Isaac if (numStrata) PetscAssertPointer(stratumValues, 3); 3499f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 3509566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &values)); 3519566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(values, stratumValues, numStrata)); 3529566063dSJacob Faibussowitsch PetscCall(PetscSortRemoveDupsInt(&numStrata, values)); 353b9907514SLisandro Dalcin if (!label->numStrata) { /* Fast preallocation */ 354b9907514SLisandro Dalcin PetscInt *tmpV; 355b9907514SLisandro Dalcin PetscInt *tmpS; 356b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 357b9907514SLisandro Dalcin IS *tmpP, is; 358b9907514SLisandro Dalcin PetscBool *tmpB; 359b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 360b9907514SLisandro Dalcin 3619566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpV)); 3629566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpS)); 3639f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(numStrata, &tmpH)); 3649f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(numStrata, &tmpP)); 3659566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpB)); 366b9907514SLisandro Dalcin label->numStrata = numStrata; 367b9907514SLisandro Dalcin label->stratumValues = tmpV; 368b9907514SLisandro Dalcin label->stratumSizes = tmpS; 369b9907514SLisandro Dalcin label->ht = tmpH; 370b9907514SLisandro Dalcin label->points = tmpP; 371b9907514SLisandro Dalcin label->validIS = tmpB; 372b9907514SLisandro Dalcin for (v = 0; v < numStrata; ++v) { 3739566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&ht)); 3749566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &is)); 3759566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(hmap, values[v], v)); 376b9907514SLisandro Dalcin tmpV[v] = values[v]; 377b9907514SLisandro Dalcin tmpS[v] = 0; 378b9907514SLisandro Dalcin tmpH[v] = ht; 379b9907514SLisandro Dalcin tmpP[v] = is; 380b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 381b9907514SLisandro Dalcin } 3829566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 383b9907514SLisandro Dalcin } else { 38448a46eb9SPierre Jolivet for (v = 0; v < numStrata; ++v) PetscCall(DMLabelAddStratum(label, values[v])); 385b9907514SLisandro Dalcin } 3869566063dSJacob Faibussowitsch PetscCall(PetscFree(values)); 3873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 388b9907514SLisandro Dalcin } 389b9907514SLisandro Dalcin 390b9907514SLisandro Dalcin /*@ 39120f4b53cSBarry Smith DMLabelAddStrataIS - Adds new stratum values in a `DMLabel` 392b9907514SLisandro Dalcin 39320f4b53cSBarry Smith Not Collective 3945b5e7992SMatthew G. Knepley 395d8d19677SJose E. Roman Input Parameters: 39620f4b53cSBarry Smith + label - The `DMLabel` 397b9907514SLisandro Dalcin - valueIS - Index set with stratum values 398b9907514SLisandro Dalcin 399b9907514SLisandro Dalcin Level: beginner 400b9907514SLisandro Dalcin 40120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 402b9907514SLisandro Dalcin @*/ 403d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStrataIS(DMLabel label, IS valueIS) 404d71ae5a4SJacob Faibussowitsch { 405b9907514SLisandro Dalcin PetscInt numStrata; 406b9907514SLisandro Dalcin const PetscInt *stratumValues; 407b9907514SLisandro Dalcin 408b9907514SLisandro Dalcin PetscFunctionBegin; 409b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 410b9907514SLisandro Dalcin PetscValidHeaderSpecific(valueIS, IS_CLASSID, 2); 4119f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 4129566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(valueIS, &numStrata)); 4139566063dSJacob Faibussowitsch PetscCall(ISGetIndices(valueIS, &stratumValues)); 4149566063dSJacob Faibussowitsch PetscCall(DMLabelAddStrata(label, numStrata, stratumValues)); 4153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 416c58f1c22SToby Isaac } 417c58f1c22SToby Isaac 4189f6c5813SMatthew G. Knepley static PetscErrorCode DMLabelView_Concrete_Ascii(DMLabel label, PetscViewer viewer) 419d71ae5a4SJacob Faibussowitsch { 420c58f1c22SToby Isaac PetscInt v; 421c58f1c22SToby Isaac PetscMPIInt rank; 422c58f1c22SToby Isaac 423c58f1c22SToby Isaac PetscFunctionBegin; 4249566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank)); 4259566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 426c58f1c22SToby Isaac if (label) { 427d67d17b1SMatthew G. Knepley const char *name; 428d67d17b1SMatthew G. Knepley 4299566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &name)); 4309566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Label '%s':\n", name)); 43163a3b9bcSJacob Faibussowitsch if (label->bt) PetscCall(PetscViewerASCIIPrintf(viewer, " Index has been calculated in [%" PetscInt_FMT ", %" PetscInt_FMT ")\n", label->pStart, label->pEnd)); 432c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 433c58f1c22SToby Isaac const PetscInt value = label->stratumValues[v]; 434ad8374ffSToby Isaac const PetscInt *points; 435c58f1c22SToby Isaac PetscInt p; 436c58f1c22SToby Isaac 4379566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 43848a46eb9SPierre Jolivet for (p = 0; p < label->stratumSizes[v]; ++p) PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %" PetscInt_FMT " (%" PetscInt_FMT ")\n", rank, points[p], value)); 4399566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 440c58f1c22SToby Isaac } 441c58f1c22SToby Isaac } 4429566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 4439566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 4443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 445c58f1c22SToby Isaac } 446c58f1c22SToby Isaac 44766976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelView_Concrete(DMLabel label, PetscViewer viewer) 4489f6c5813SMatthew G. Knepley { 4499f196a02SMartin Diehl PetscBool isascii; 4509f6c5813SMatthew G. Knepley 4519f6c5813SMatthew G. Knepley PetscFunctionBegin; 4529f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 4539f196a02SMartin Diehl if (isascii) PetscCall(DMLabelView_Concrete_Ascii(label, viewer)); 4543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4559f6c5813SMatthew G. Knepley } 4569f6c5813SMatthew G. Knepley 457ffeef943SBarry Smith /*@ 458c58f1c22SToby Isaac DMLabelView - View the label 459c58f1c22SToby Isaac 46020f4b53cSBarry Smith Collective 4615b5e7992SMatthew G. Knepley 462c58f1c22SToby Isaac Input Parameters: 46320f4b53cSBarry Smith + label - The `DMLabel` 46420f4b53cSBarry Smith - viewer - The `PetscViewer` 465c58f1c22SToby Isaac 466c58f1c22SToby Isaac Level: intermediate 467c58f1c22SToby Isaac 46820f4b53cSBarry Smith .seealso: `DMLabel`, `PetscViewer`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 469c58f1c22SToby Isaac @*/ 470d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelView(DMLabel label, PetscViewer viewer) 471d71ae5a4SJacob Faibussowitsch { 472c58f1c22SToby Isaac PetscFunctionBegin; 473d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 4749566063dSJacob Faibussowitsch if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)label), &viewer)); 475c58f1c22SToby Isaac PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 4769f6c5813SMatthew G. Knepley PetscCall(DMLabelMakeAllValid_Private(label)); 4779f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, view, viewer); 4783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 479c58f1c22SToby Isaac } 480c58f1c22SToby Isaac 48184f0b6dfSMatthew G. Knepley /*@ 48220f4b53cSBarry Smith DMLabelReset - Destroys internal data structures in a `DMLabel` 483d67d17b1SMatthew G. Knepley 48420f4b53cSBarry Smith Not Collective 4855b5e7992SMatthew G. Knepley 486d67d17b1SMatthew G. Knepley Input Parameter: 48720f4b53cSBarry Smith . label - The `DMLabel` 488d67d17b1SMatthew G. Knepley 489d67d17b1SMatthew G. Knepley Level: beginner 490d67d17b1SMatthew G. Knepley 49120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDestroy()`, `DMLabelCreate()` 492d67d17b1SMatthew G. Knepley @*/ 493d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelReset(DMLabel label) 494d71ae5a4SJacob Faibussowitsch { 495d67d17b1SMatthew G. Knepley PetscInt v; 496d67d17b1SMatthew G. Knepley 497d67d17b1SMatthew G. Knepley PetscFunctionBegin; 498d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 499d67d17b1SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 5009f6c5813SMatthew G. Knepley if (label->ht[v]) PetscCall(PetscHSetIDestroy(&label->ht[v])); 5019566063dSJacob Faibussowitsch PetscCall(ISDestroy(&label->points[v])); 502d67d17b1SMatthew G. Knepley } 503b9907514SLisandro Dalcin label->numStrata = 0; 5049566063dSJacob Faibussowitsch PetscCall(PetscFree(label->stratumValues)); 5059566063dSJacob Faibussowitsch PetscCall(PetscFree(label->stratumSizes)); 5069566063dSJacob Faibussowitsch PetscCall(PetscFree(label->ht)); 5079566063dSJacob Faibussowitsch PetscCall(PetscFree(label->points)); 5089566063dSJacob Faibussowitsch PetscCall(PetscFree(label->validIS)); 5099566063dSJacob Faibussowitsch PetscCall(PetscHMapIReset(label->hmap)); 510b9907514SLisandro Dalcin label->pStart = -1; 511b9907514SLisandro Dalcin label->pEnd = -1; 5129566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 5133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 514d67d17b1SMatthew G. Knepley } 515d67d17b1SMatthew G. Knepley 516d67d17b1SMatthew G. Knepley /*@ 51720f4b53cSBarry Smith DMLabelDestroy - Destroys a `DMLabel` 51884f0b6dfSMatthew G. Knepley 51920f4b53cSBarry Smith Collective 5205b5e7992SMatthew G. Knepley 52184f0b6dfSMatthew G. Knepley Input Parameter: 52220f4b53cSBarry Smith . label - The `DMLabel` 52384f0b6dfSMatthew G. Knepley 52484f0b6dfSMatthew G. Knepley Level: beginner 52584f0b6dfSMatthew G. Knepley 52620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelReset()`, `DMLabelCreate()` 52784f0b6dfSMatthew G. Knepley @*/ 528d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDestroy(DMLabel *label) 529d71ae5a4SJacob Faibussowitsch { 530c58f1c22SToby Isaac PetscFunctionBegin; 5313ba16761SJacob Faibussowitsch if (!*label) PetscFunctionReturn(PETSC_SUCCESS); 532f4f49eeaSPierre Jolivet PetscValidHeaderSpecific(*label, DMLABEL_CLASSID, 1); 533f4f49eeaSPierre Jolivet if (--((PetscObject)*label)->refct > 0) { 5349371c9d4SSatish Balay *label = NULL; 5353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5369371c9d4SSatish Balay } 5379566063dSJacob Faibussowitsch PetscCall(DMLabelReset(*label)); 5389566063dSJacob Faibussowitsch PetscCall(PetscHMapIDestroy(&(*label)->hmap)); 5399566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(label)); 5403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 541c58f1c22SToby Isaac } 542c58f1c22SToby Isaac 54366976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelDuplicate_Concrete(DMLabel label, DMLabel *labelnew) 5449f6c5813SMatthew G. Knepley { 5459f6c5813SMatthew G. Knepley PetscFunctionBegin; 5469f6c5813SMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 5479f6c5813SMatthew G. Knepley PetscCall(PetscHSetICreate(&(*labelnew)->ht[v])); 548f4f49eeaSPierre Jolivet PetscCall(PetscObjectReference((PetscObject)label->points[v])); 5499f6c5813SMatthew G. Knepley (*labelnew)->points[v] = label->points[v]; 5509f6c5813SMatthew G. Knepley } 5519f6c5813SMatthew G. Knepley PetscCall(PetscHMapIDestroy(&(*labelnew)->hmap)); 5529f6c5813SMatthew G. Knepley PetscCall(PetscHMapIDuplicate(label->hmap, &(*labelnew)->hmap)); 5533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5549f6c5813SMatthew G. Knepley } 5559f6c5813SMatthew G. Knepley 55684f0b6dfSMatthew G. Knepley /*@ 55720f4b53cSBarry Smith DMLabelDuplicate - Duplicates a `DMLabel` 55884f0b6dfSMatthew G. Knepley 55920f4b53cSBarry Smith Collective 5605b5e7992SMatthew G. Knepley 56184f0b6dfSMatthew G. Knepley Input Parameter: 56220f4b53cSBarry Smith . label - The `DMLabel` 56384f0b6dfSMatthew G. Knepley 56484f0b6dfSMatthew G. Knepley Output Parameter: 56520f4b53cSBarry Smith . labelnew - new label 56684f0b6dfSMatthew G. Knepley 56784f0b6dfSMatthew G. Knepley Level: intermediate 56884f0b6dfSMatthew G. Knepley 56920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 57084f0b6dfSMatthew G. Knepley @*/ 571d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDuplicate(DMLabel label, DMLabel *labelnew) 572d71ae5a4SJacob Faibussowitsch { 573d67d17b1SMatthew G. Knepley const char *name; 574c58f1c22SToby Isaac 575c58f1c22SToby Isaac PetscFunctionBegin; 576d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 5779566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 5789566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &name)); 5799566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PetscObjectComm((PetscObject)label), name, labelnew)); 580c58f1c22SToby Isaac 581c58f1c22SToby Isaac (*labelnew)->numStrata = label->numStrata; 5825aa44df4SToby Isaac (*labelnew)->defaultValue = label->defaultValue; 5838dcf10e8SMatthew G. Knepley (*labelnew)->readonly = label->readonly; 5849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->stratumValues)); 5859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->stratumSizes)); 5869f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(label->numStrata, &(*labelnew)->ht)); 5879f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(label->numStrata, &(*labelnew)->points)); 5889566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->validIS)); 5899f6c5813SMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 590c58f1c22SToby Isaac (*labelnew)->stratumValues[v] = label->stratumValues[v]; 591c58f1c22SToby Isaac (*labelnew)->stratumSizes[v] = label->stratumSizes[v]; 592b9907514SLisandro Dalcin (*labelnew)->validIS[v] = PETSC_TRUE; 593c58f1c22SToby Isaac } 594c58f1c22SToby Isaac (*labelnew)->pStart = -1; 595c58f1c22SToby Isaac (*labelnew)->pEnd = -1; 596c58f1c22SToby Isaac (*labelnew)->bt = NULL; 5979f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, duplicate, labelnew); 5983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 599c58f1c22SToby Isaac } 600c58f1c22SToby Isaac 601609dae6eSVaclav Hapla /*@C 60220f4b53cSBarry Smith DMLabelCompare - Compare two `DMLabel` objects 603609dae6eSVaclav Hapla 60420f4b53cSBarry Smith Collective; No Fortran Support 605609dae6eSVaclav Hapla 606609dae6eSVaclav Hapla Input Parameters: 607f1a722f8SMatthew G. Knepley + comm - Comm over which to compare labels 60820f4b53cSBarry Smith . l0 - First `DMLabel` 60920f4b53cSBarry Smith - l1 - Second `DMLabel` 610609dae6eSVaclav Hapla 611a4e35b19SJacob Faibussowitsch Output Parameters: 6125efe38ccSVaclav Hapla + equal - (Optional) Flag whether the two labels are equal 6135efe38ccSVaclav Hapla - message - (Optional) Message describing the difference 614609dae6eSVaclav Hapla 615609dae6eSVaclav Hapla Level: intermediate 616609dae6eSVaclav Hapla 617609dae6eSVaclav Hapla Notes: 6185efe38ccSVaclav Hapla The output flag equal is the same on all processes. 61920f4b53cSBarry Smith If it is passed as `NULL` and difference is found, an error is thrown on all processes. 62020f4b53cSBarry Smith Make sure to pass `NULL` on all processes. 621609dae6eSVaclav Hapla 6225efe38ccSVaclav Hapla The output message is set independently on each rank. 62320f4b53cSBarry Smith It is set to `NULL` if no difference was found on the current rank. It must be freed by user. 62420f4b53cSBarry Smith If message is passed as `NULL` and difference is found, the difference description is printed to stderr in synchronized manner. 62520f4b53cSBarry Smith Make sure to pass `NULL` on all processes. 626609dae6eSVaclav Hapla 627609dae6eSVaclav Hapla For the comparison, we ignore the order of stratum values, and strata with no points. 628609dae6eSVaclav Hapla 62920f4b53cSBarry Smith The communicator needs to be specified because currently `DMLabel` can live on `PETSC_COMM_SELF` even if the underlying `DM` is parallel. 6305efe38ccSVaclav Hapla 631a3b724e8SBarry Smith Developer Note: 632a3b724e8SBarry Smith Fortran stub cannot be generated automatically because `message` must be freed with `PetscFree()` 633a3b724e8SBarry Smith 63420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMCompareLabels()`, `DMLabelGetNumValues()`, `DMLabelGetDefaultValue()`, `DMLabelGetNonEmptyStratumValuesIS()`, `DMLabelGetStratumIS()` 635609dae6eSVaclav Hapla @*/ 636d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCompare(MPI_Comm comm, DMLabel l0, DMLabel l1, PetscBool *equal, char **message) 637d71ae5a4SJacob Faibussowitsch { 638609dae6eSVaclav Hapla const char *name0, *name1; 639609dae6eSVaclav Hapla char msg[PETSC_MAX_PATH_LEN] = ""; 6405efe38ccSVaclav Hapla PetscBool eq; 6415efe38ccSVaclav Hapla PetscMPIInt rank; 642609dae6eSVaclav Hapla 643609dae6eSVaclav Hapla PetscFunctionBegin; 6445efe38ccSVaclav Hapla PetscValidHeaderSpecific(l0, DMLABEL_CLASSID, 2); 6455efe38ccSVaclav Hapla PetscValidHeaderSpecific(l1, DMLABEL_CLASSID, 3); 6464f572ea9SToby Isaac if (equal) PetscAssertPointer(equal, 4); 6474f572ea9SToby Isaac if (message) PetscAssertPointer(message, 5); 6489566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 6499566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)l0, &name0)); 6509566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)l1, &name1)); 651609dae6eSVaclav Hapla { 652609dae6eSVaclav Hapla PetscInt v0, v1; 653609dae6eSVaclav Hapla 6549566063dSJacob Faibussowitsch PetscCall(DMLabelGetDefaultValue(l0, &v0)); 6559566063dSJacob Faibussowitsch PetscCall(DMLabelGetDefaultValue(l1, &v1)); 6565efe38ccSVaclav Hapla eq = (PetscBool)(v0 == v1); 65748a46eb9SPierre Jolivet if (!eq) PetscCall(PetscSNPrintf(msg, sizeof(msg), "Default value of DMLabel l0 \"%s\" = %" PetscInt_FMT " != %" PetscInt_FMT " = Default value of DMLabel l1 \"%s\"", name0, v0, v1, name1)); 6585440e5dcSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPI_C_BOOL, MPI_LAND, comm)); 6595efe38ccSVaclav Hapla if (!eq) goto finish; 660609dae6eSVaclav Hapla } 661609dae6eSVaclav Hapla { 662609dae6eSVaclav Hapla IS is0, is1; 663609dae6eSVaclav Hapla 6649566063dSJacob Faibussowitsch PetscCall(DMLabelGetNonEmptyStratumValuesIS(l0, &is0)); 6659566063dSJacob Faibussowitsch PetscCall(DMLabelGetNonEmptyStratumValuesIS(l1, &is1)); 6669566063dSJacob Faibussowitsch PetscCall(ISEqual(is0, is1, &eq)); 6679566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is0)); 6689566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is1)); 66948a46eb9SPierre Jolivet if (!eq) PetscCall(PetscSNPrintf(msg, sizeof(msg), "Stratum values in DMLabel l0 \"%s\" are different than in DMLabel l1 \"%s\"", name0, name1)); 6705440e5dcSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPI_C_BOOL, MPI_LAND, comm)); 6715efe38ccSVaclav Hapla if (!eq) goto finish; 672609dae6eSVaclav Hapla } 673609dae6eSVaclav Hapla { 674609dae6eSVaclav Hapla PetscInt i, nValues; 675609dae6eSVaclav Hapla 6769566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(l0, &nValues)); 677609dae6eSVaclav Hapla for (i = 0; i < nValues; i++) { 678609dae6eSVaclav Hapla const PetscInt v = l0->stratumValues[i]; 679609dae6eSVaclav Hapla PetscInt n; 680609dae6eSVaclav Hapla IS is0, is1; 681609dae6eSVaclav Hapla 6829566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(l0, i, &n)); 683609dae6eSVaclav Hapla if (!n) continue; 6849566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(l0, v, &is0)); 6859566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(l1, v, &is1)); 6869566063dSJacob Faibussowitsch PetscCall(ISEqualUnsorted(is0, is1, &eq)); 6879566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is0)); 6889566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is1)); 6895efe38ccSVaclav Hapla if (!eq) { 69063a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(msg, sizeof(msg), "Stratum #%" PetscInt_FMT " with value %" PetscInt_FMT " contains different points in DMLabel l0 \"%s\" and DMLabel l1 \"%s\"", i, v, name0, name1)); 6915efe38ccSVaclav Hapla break; 692609dae6eSVaclav Hapla } 693609dae6eSVaclav Hapla } 6945440e5dcSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPI_C_BOOL, MPI_LAND, comm)); 695609dae6eSVaclav Hapla } 696609dae6eSVaclav Hapla finish: 6975efe38ccSVaclav Hapla /* If message output arg not set, print to stderr */ 698609dae6eSVaclav Hapla if (message) { 699609dae6eSVaclav Hapla *message = NULL; 70048a46eb9SPierre Jolivet if (msg[0]) PetscCall(PetscStrallocpy(msg, message)); 7015efe38ccSVaclav Hapla } else { 70248a46eb9SPierre Jolivet if (msg[0]) PetscCall(PetscSynchronizedFPrintf(comm, PETSC_STDERR, "[%d] %s\n", rank, msg)); 7039566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(comm, PETSC_STDERR)); 7045efe38ccSVaclav Hapla } 7055efe38ccSVaclav Hapla /* If same output arg not ser and labels are not equal, throw error */ 7065efe38ccSVaclav Hapla if (equal) *equal = eq; 70763a3b9bcSJacob Faibussowitsch else PetscCheck(eq, comm, PETSC_ERR_ARG_INCOMP, "DMLabels l0 \"%s\" and l1 \"%s\" are not equal", name0, name1); 7083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 709609dae6eSVaclav Hapla } 710609dae6eSVaclav Hapla 711c6a43d28SMatthew G. Knepley /*@ 712c6a43d28SMatthew G. Knepley DMLabelComputeIndex - Create an index structure for membership determination, automatically determining the bounds 713c6a43d28SMatthew G. Knepley 71420f4b53cSBarry Smith Not Collective 7155b5e7992SMatthew G. Knepley 716c6a43d28SMatthew G. Knepley Input Parameter: 71720f4b53cSBarry Smith . label - The `DMLabel` 718c6a43d28SMatthew G. Knepley 719c6a43d28SMatthew G. Knepley Level: intermediate 720c6a43d28SMatthew G. Knepley 72120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelDestroyIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 722c6a43d28SMatthew G. Knepley @*/ 723d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelComputeIndex(DMLabel label) 724d71ae5a4SJacob Faibussowitsch { 7251690c2aeSBarry Smith PetscInt pStart = PETSC_INT_MAX, pEnd = -1, v; 726c6a43d28SMatthew G. Knepley 727c6a43d28SMatthew G. Knepley PetscFunctionBegin; 728c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 7299566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 730c6a43d28SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 731c6a43d28SMatthew G. Knepley const PetscInt *points; 732c6a43d28SMatthew G. Knepley PetscInt i; 733c6a43d28SMatthew G. Knepley 7349566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 735c6a43d28SMatthew G. Knepley for (i = 0; i < label->stratumSizes[v]; ++i) { 736c6a43d28SMatthew G. Knepley const PetscInt point = points[i]; 737c6a43d28SMatthew G. Knepley 738c6a43d28SMatthew G. Knepley pStart = PetscMin(point, pStart); 739c6a43d28SMatthew G. Knepley pEnd = PetscMax(point + 1, pEnd); 740c6a43d28SMatthew G. Knepley } 7419566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 742c6a43d28SMatthew G. Knepley } 7431690c2aeSBarry Smith label->pStart = pStart == PETSC_INT_MAX ? -1 : pStart; 744c6a43d28SMatthew G. Knepley label->pEnd = pEnd; 7459566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, label->pStart, label->pEnd)); 7463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 747c6a43d28SMatthew G. Knepley } 748c6a43d28SMatthew G. Knepley 749c6a43d28SMatthew G. Knepley /*@ 750c6a43d28SMatthew G. Knepley DMLabelCreateIndex - Create an index structure for membership determination 751c6a43d28SMatthew G. Knepley 75220f4b53cSBarry Smith Not Collective 7535b5e7992SMatthew G. Knepley 754c6a43d28SMatthew G. Knepley Input Parameters: 75520f4b53cSBarry Smith + label - The `DMLabel` 756c6a43d28SMatthew G. Knepley . pStart - The smallest point 757c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 758c6a43d28SMatthew G. Knepley 759c6a43d28SMatthew G. Knepley Level: intermediate 760c6a43d28SMatthew G. Knepley 76120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelComputeIndex()`, `DMLabelDestroyIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 762c6a43d28SMatthew G. Knepley @*/ 763d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCreateIndex(DMLabel label, PetscInt pStart, PetscInt pEnd) 764d71ae5a4SJacob Faibussowitsch { 765c58f1c22SToby Isaac PetscInt v; 766c58f1c22SToby Isaac 767c58f1c22SToby Isaac PetscFunctionBegin; 768d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 7699566063dSJacob Faibussowitsch PetscCall(DMLabelDestroyIndex(label)); 7709566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 771c58f1c22SToby Isaac label->pStart = pStart; 772c58f1c22SToby Isaac label->pEnd = pEnd; 773c6a43d28SMatthew G. Knepley /* This can be hooked into SetValue(), ClearValue(), etc. for updating */ 7749566063dSJacob Faibussowitsch PetscCall(PetscBTCreate(pEnd - pStart, &label->bt)); 775c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 7769f6c5813SMatthew G. Knepley IS pointIS; 777ad8374ffSToby Isaac const PetscInt *points; 778c58f1c22SToby Isaac PetscInt i; 779c58f1c22SToby Isaac 7809f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &pointIS); 7819f6c5813SMatthew G. Knepley PetscCall(ISGetIndices(pointIS, &points)); 782c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 783ad8374ffSToby Isaac const PetscInt point = points[i]; 784c58f1c22SToby Isaac 7859f6c5813SMatthew G. Knepley PetscCheck(!(point < pStart) && !(point >= pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " in stratum %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->stratumValues[v], pStart, pEnd); 7869566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - pStart)); 787c58f1c22SToby Isaac } 7889566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 7899f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&pointIS)); 790c58f1c22SToby Isaac } 7913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 792c58f1c22SToby Isaac } 793c58f1c22SToby Isaac 794c6a43d28SMatthew G. Knepley /*@ 795c6a43d28SMatthew G. Knepley DMLabelDestroyIndex - Destroy the index structure 796c6a43d28SMatthew G. Knepley 79720f4b53cSBarry Smith Not Collective 7985b5e7992SMatthew G. Knepley 799c6a43d28SMatthew G. Knepley Input Parameter: 80020f4b53cSBarry Smith . label - the `DMLabel` 801c6a43d28SMatthew G. Knepley 802c6a43d28SMatthew G. Knepley Level: intermediate 803c6a43d28SMatthew G. Knepley 80420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 805c6a43d28SMatthew G. Knepley @*/ 806d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDestroyIndex(DMLabel label) 807d71ae5a4SJacob Faibussowitsch { 808c58f1c22SToby Isaac PetscFunctionBegin; 809d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 810c58f1c22SToby Isaac label->pStart = -1; 811c58f1c22SToby Isaac label->pEnd = -1; 8129566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 8133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 814c58f1c22SToby Isaac } 815c58f1c22SToby Isaac 816c58f1c22SToby Isaac /*@ 817c6a43d28SMatthew G. Knepley DMLabelGetBounds - Return the smallest and largest point in the label 818c6a43d28SMatthew G. Knepley 81920f4b53cSBarry Smith Not Collective 8205b5e7992SMatthew G. Knepley 821c6a43d28SMatthew G. Knepley Input Parameter: 82220f4b53cSBarry Smith . label - the `DMLabel` 823c6a43d28SMatthew G. Knepley 824c6a43d28SMatthew G. Knepley Output Parameters: 825c6a43d28SMatthew G. Knepley + pStart - The smallest point 826c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 827c6a43d28SMatthew G. Knepley 828c6a43d28SMatthew G. Knepley Level: intermediate 829c6a43d28SMatthew G. Knepley 83020f4b53cSBarry Smith Note: 83120f4b53cSBarry Smith This will compute an index for the label if one does not exist. 83220f4b53cSBarry Smith 83320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 834c6a43d28SMatthew G. Knepley @*/ 835d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetBounds(DMLabel label, PetscInt *pStart, PetscInt *pEnd) 836d71ae5a4SJacob Faibussowitsch { 837c6a43d28SMatthew G. Knepley PetscFunctionBegin; 838c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8399566063dSJacob Faibussowitsch if ((label->pStart == -1) && (label->pEnd == -1)) PetscCall(DMLabelComputeIndex(label)); 840c6a43d28SMatthew G. Knepley if (pStart) { 8414f572ea9SToby Isaac PetscAssertPointer(pStart, 2); 842c6a43d28SMatthew G. Knepley *pStart = label->pStart; 843c6a43d28SMatthew G. Knepley } 844c6a43d28SMatthew G. Knepley if (pEnd) { 8454f572ea9SToby Isaac PetscAssertPointer(pEnd, 3); 846c6a43d28SMatthew G. Knepley *pEnd = label->pEnd; 847c6a43d28SMatthew G. Knepley } 8483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 849c6a43d28SMatthew G. Knepley } 850c6a43d28SMatthew G. Knepley 851c6a43d28SMatthew G. Knepley /*@ 852c58f1c22SToby Isaac DMLabelHasValue - Determine whether a label assigns the value to any point 853c58f1c22SToby Isaac 85420f4b53cSBarry Smith Not Collective 8555b5e7992SMatthew G. Knepley 856c58f1c22SToby Isaac Input Parameters: 85720f4b53cSBarry Smith + label - the `DMLabel` 858c58f1c22SToby Isaac - value - the value 859c58f1c22SToby Isaac 860c58f1c22SToby Isaac Output Parameter: 861c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this value to any point 862c58f1c22SToby Isaac 863c58f1c22SToby Isaac Level: developer 864c58f1c22SToby Isaac 86520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelGetValue()`, `DMLabelSetValue()` 866c58f1c22SToby Isaac @*/ 867d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasValue(DMLabel label, PetscInt value, PetscBool *contains) 868d71ae5a4SJacob Faibussowitsch { 869c58f1c22SToby Isaac PetscInt v; 870c58f1c22SToby Isaac 871c58f1c22SToby Isaac PetscFunctionBegin; 872d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8734f572ea9SToby Isaac PetscAssertPointer(contains, 3); 8749566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 8750c3c4a36SLisandro Dalcin *contains = v < 0 ? PETSC_FALSE : PETSC_TRUE; 8763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 877c58f1c22SToby Isaac } 878c58f1c22SToby Isaac 879c58f1c22SToby Isaac /*@ 880c58f1c22SToby Isaac DMLabelHasPoint - Determine whether a label assigns a value to a point 881c58f1c22SToby Isaac 88220f4b53cSBarry Smith Not Collective 8835b5e7992SMatthew G. Knepley 884c58f1c22SToby Isaac Input Parameters: 88520f4b53cSBarry Smith + label - the `DMLabel` 886c58f1c22SToby Isaac - point - the point 887c58f1c22SToby Isaac 888c58f1c22SToby Isaac Output Parameter: 889c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this point to a value 890c58f1c22SToby Isaac 891c58f1c22SToby Isaac Level: developer 892c58f1c22SToby Isaac 89320f4b53cSBarry Smith Note: 89420f4b53cSBarry Smith The user must call `DMLabelCreateIndex()` before this function. 89520f4b53cSBarry Smith 89620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 897c58f1c22SToby Isaac @*/ 898d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasPoint(DMLabel label, PetscInt point, PetscBool *contains) 899d71ae5a4SJacob Faibussowitsch { 900*f1d0ab6dSZach Atkins PetscInt pStart, pEnd; 901*f1d0ab6dSZach Atkins 902c58f1c22SToby Isaac PetscFunctionBeginHot; 903d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9044f572ea9SToby Isaac PetscAssertPointer(contains, 3); 905*f1d0ab6dSZach Atkins /* DMLabelGetBounds() calls DMLabelCreateIndex() only if needed */ 906*f1d0ab6dSZach Atkins PetscCall(DMLabelGetBounds(label, &pStart, &pEnd)); 9079566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 908*f1d0ab6dSZach Atkins *contains = point >= pStart && point < pEnd && (PetscBTLookup(label->bt, point - label->pStart) ? PETSC_TRUE : PETSC_FALSE); 9093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 910c58f1c22SToby Isaac } 911c58f1c22SToby Isaac 912c58f1c22SToby Isaac /*@ 913c58f1c22SToby Isaac DMLabelStratumHasPoint - Return true if the stratum contains a point 914c58f1c22SToby Isaac 91520f4b53cSBarry Smith Not Collective 9165b5e7992SMatthew G. Knepley 917c58f1c22SToby Isaac Input Parameters: 91820f4b53cSBarry Smith + label - the `DMLabel` 919c58f1c22SToby Isaac . value - the stratum value 920c58f1c22SToby Isaac - point - the point 921c58f1c22SToby Isaac 922c58f1c22SToby Isaac Output Parameter: 923c58f1c22SToby Isaac . contains - true if the stratum contains the point 924c58f1c22SToby Isaac 925c58f1c22SToby Isaac Level: intermediate 926c58f1c22SToby Isaac 92720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetValue()`, `DMLabelClearValue()` 928c58f1c22SToby Isaac @*/ 929d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelStratumHasPoint(DMLabel label, PetscInt value, PetscInt point, PetscBool *contains) 930d71ae5a4SJacob Faibussowitsch { 9310c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 932d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9334f572ea9SToby Isaac PetscAssertPointer(contains, 4); 934cffad2c9SToby Isaac if (value == label->defaultValue) { 935cffad2c9SToby Isaac PetscInt pointVal; 9360c3c4a36SLisandro Dalcin 937cffad2c9SToby Isaac PetscCall(DMLabelGetValue(label, point, &pointVal)); 938cffad2c9SToby Isaac *contains = (PetscBool)(pointVal == value); 939cffad2c9SToby Isaac } else { 940cffad2c9SToby Isaac PetscInt v; 941cffad2c9SToby Isaac 942cffad2c9SToby Isaac PetscCall(DMLabelLookupStratum(label, value, &v)); 943cffad2c9SToby Isaac if (v >= 0) { 9449f6c5813SMatthew G. Knepley if (label->validIS[v] || label->readonly) { 9459f6c5813SMatthew G. Knepley IS is; 946c58f1c22SToby Isaac PetscInt i; 947c58f1c22SToby Isaac 9489f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 9492b4d18a0SMatthew G. Knepley PetscCall(ISLocate(is, point, &i)); 9509f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 951cffad2c9SToby Isaac *contains = (PetscBool)(i >= 0); 952c58f1c22SToby Isaac } else { 953cffad2c9SToby Isaac PetscCall(PetscHSetIHas(label->ht[v], point, contains)); 954cffad2c9SToby Isaac } 955cffad2c9SToby Isaac } else { // value is not present 956cffad2c9SToby Isaac *contains = PETSC_FALSE; 957cffad2c9SToby Isaac } 958c58f1c22SToby Isaac } 9593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 960c58f1c22SToby Isaac } 961c58f1c22SToby Isaac 96284f0b6dfSMatthew G. Knepley /*@ 96320f4b53cSBarry Smith DMLabelGetDefaultValue - Get the default value returned by `DMLabelGetValue()` if a point has not been explicitly given a value. 9645aa44df4SToby Isaac When a label is created, it is initialized to -1. 9655aa44df4SToby Isaac 96620f4b53cSBarry Smith Not Collective 9675b5e7992SMatthew G. Knepley 96860225df5SJacob Faibussowitsch Input Parameter: 96920f4b53cSBarry Smith . label - a `DMLabel` object 9705aa44df4SToby Isaac 97160225df5SJacob Faibussowitsch Output Parameter: 9725aa44df4SToby Isaac . defaultValue - the default value 9735aa44df4SToby Isaac 9745aa44df4SToby Isaac Level: beginner 9755aa44df4SToby Isaac 97620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelSetDefaultValue()`, `DMLabelGetValue()`, `DMLabelSetValue()` 97784f0b6dfSMatthew G. Knepley @*/ 978d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetDefaultValue(DMLabel label, PetscInt *defaultValue) 979d71ae5a4SJacob Faibussowitsch { 9805aa44df4SToby Isaac PetscFunctionBegin; 981d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9825aa44df4SToby Isaac *defaultValue = label->defaultValue; 9833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9845aa44df4SToby Isaac } 9855aa44df4SToby Isaac 98684f0b6dfSMatthew G. Knepley /*@ 98720f4b53cSBarry Smith DMLabelSetDefaultValue - Set the default value returned by `DMLabelGetValue()` if a point has not been explicitly given a value. 9885aa44df4SToby Isaac When a label is created, it is initialized to -1. 9895aa44df4SToby Isaac 99020f4b53cSBarry Smith Not Collective 9915b5e7992SMatthew G. Knepley 99260225df5SJacob Faibussowitsch Input Parameter: 99320f4b53cSBarry Smith . label - a `DMLabel` object 9945aa44df4SToby Isaac 99560225df5SJacob Faibussowitsch Output Parameter: 9965aa44df4SToby Isaac . defaultValue - the default value 9975aa44df4SToby Isaac 9985aa44df4SToby Isaac Level: beginner 9995aa44df4SToby Isaac 100020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetDefaultValue()`, `DMLabelGetValue()`, `DMLabelSetValue()` 100184f0b6dfSMatthew G. Knepley @*/ 1002d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetDefaultValue(DMLabel label, PetscInt defaultValue) 1003d71ae5a4SJacob Faibussowitsch { 10045aa44df4SToby Isaac PetscFunctionBegin; 1005d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10065aa44df4SToby Isaac label->defaultValue = defaultValue; 10073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10085aa44df4SToby Isaac } 10095aa44df4SToby Isaac 1010c58f1c22SToby Isaac /*@ 101120f4b53cSBarry Smith DMLabelGetValue - Return the value a label assigns to a point, or the label's default value (which is initially -1, and can be changed with 101220f4b53cSBarry Smith `DMLabelSetDefaultValue()`) 1013c58f1c22SToby Isaac 101420f4b53cSBarry Smith Not Collective 10155b5e7992SMatthew G. Knepley 1016c58f1c22SToby Isaac Input Parameters: 101720f4b53cSBarry Smith + label - the `DMLabel` 1018c58f1c22SToby Isaac - point - the point 1019c58f1c22SToby Isaac 1020c58f1c22SToby Isaac Output Parameter: 10218e68afcfSMatthew G. Knepley . value - The point value, or the default value (-1 by default) 1022c58f1c22SToby Isaac 1023c58f1c22SToby Isaac Level: intermediate 1024c58f1c22SToby Isaac 102520f4b53cSBarry Smith Note: 102620f4b53cSBarry Smith A label may assign multiple values to a point. No guarantees are made about which value is returned in that case. 102720f4b53cSBarry Smith Use `DMLabelStratumHasPoint()` to check for inclusion in a specific value stratum. 102820f4b53cSBarry Smith 102920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetValue()`, `DMLabelClearValue()`, `DMLabelGetDefaultValue()`, `DMLabelSetDefaultValue()` 1030c58f1c22SToby Isaac @*/ 1031d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValue(DMLabel label, PetscInt point, PetscInt *value) 1032d71ae5a4SJacob Faibussowitsch { 1033c58f1c22SToby Isaac PetscInt v; 1034c58f1c22SToby Isaac 10350c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 1036d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10374f572ea9SToby Isaac PetscAssertPointer(value, 3); 10385aa44df4SToby Isaac *value = label->defaultValue; 1039c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 10409f6c5813SMatthew G. Knepley if (label->validIS[v] || label->readonly) { 10419f6c5813SMatthew G. Knepley IS is; 1042c58f1c22SToby Isaac PetscInt i; 1043c58f1c22SToby Isaac 10449f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 10452b4d18a0SMatthew G. Knepley PetscCall(ISLocate(label->points[v], point, &i)); 10469f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 1047c58f1c22SToby Isaac if (i >= 0) { 1048c58f1c22SToby Isaac *value = label->stratumValues[v]; 1049c58f1c22SToby Isaac break; 1050c58f1c22SToby Isaac } 1051c58f1c22SToby Isaac } else { 1052c58f1c22SToby Isaac PetscBool has; 1053c58f1c22SToby Isaac 10549566063dSJacob Faibussowitsch PetscCall(PetscHSetIHas(label->ht[v], point, &has)); 1055c58f1c22SToby Isaac if (has) { 1056c58f1c22SToby Isaac *value = label->stratumValues[v]; 1057c58f1c22SToby Isaac break; 1058c58f1c22SToby Isaac } 1059c58f1c22SToby Isaac } 1060c58f1c22SToby Isaac } 10613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1062c58f1c22SToby Isaac } 1063c58f1c22SToby Isaac 1064c58f1c22SToby Isaac /*@ 106520f4b53cSBarry Smith DMLabelSetValue - Set the value a label assigns to a point. If the value is the same as the label's default value (which is initially -1, and can 106620f4b53cSBarry Smith be changed with `DMLabelSetDefaultValue()` to something different), then this function will do nothing. 1067c58f1c22SToby Isaac 106820f4b53cSBarry Smith Not Collective 10695b5e7992SMatthew G. Knepley 1070c58f1c22SToby Isaac Input Parameters: 107120f4b53cSBarry Smith + label - the `DMLabel` 1072c58f1c22SToby Isaac . point - the point 1073c58f1c22SToby Isaac - value - The point value 1074c58f1c22SToby Isaac 1075c58f1c22SToby Isaac Level: intermediate 1076c58f1c22SToby Isaac 107720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelClearValue()`, `DMLabelGetDefaultValue()`, `DMLabelSetDefaultValue()` 1078c58f1c22SToby Isaac @*/ 1079d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetValue(DMLabel label, PetscInt point, PetscInt value) 1080d71ae5a4SJacob Faibussowitsch { 1081c58f1c22SToby Isaac PetscInt v; 1082c58f1c22SToby Isaac 1083c58f1c22SToby Isaac PetscFunctionBegin; 1084d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10850c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 10863ba16761SJacob Faibussowitsch if (value == label->defaultValue) PetscFunctionReturn(PETSC_SUCCESS); 10879f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 10889566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 1089c58f1c22SToby Isaac /* Set key */ 10909566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 10919566063dSJacob Faibussowitsch PetscCall(PetscHSetIAdd(label->ht[v], point)); 10923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1093c58f1c22SToby Isaac } 1094c58f1c22SToby Isaac 1095c58f1c22SToby Isaac /*@ 1096c58f1c22SToby Isaac DMLabelClearValue - Clear the value a label assigns to a point 1097c58f1c22SToby Isaac 109820f4b53cSBarry Smith Not Collective 10995b5e7992SMatthew G. Knepley 1100c58f1c22SToby Isaac Input Parameters: 110120f4b53cSBarry Smith + label - the `DMLabel` 1102c58f1c22SToby Isaac . point - the point 1103c58f1c22SToby Isaac - value - The point value 1104c58f1c22SToby Isaac 1105c58f1c22SToby Isaac Level: intermediate 1106c58f1c22SToby Isaac 110720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()` 1108c58f1c22SToby Isaac @*/ 1109d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelClearValue(DMLabel label, PetscInt point, PetscInt value) 1110d71ae5a4SJacob Faibussowitsch { 1111ad8374ffSToby Isaac PetscInt v; 1112c58f1c22SToby Isaac 1113c58f1c22SToby Isaac PetscFunctionBegin; 1114d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 11159f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 1116c58f1c22SToby Isaac /* Find label value */ 11179566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 11183ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 11190c3c4a36SLisandro Dalcin 1120*f1d0ab6dSZach Atkins if (label->bt && point >= label->pStart && point < label->pEnd) PetscCall(PetscBTClear(label->bt, point - label->pStart)); 11210c3c4a36SLisandro Dalcin 11220c3c4a36SLisandro Dalcin /* Delete key */ 11239566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 11249566063dSJacob Faibussowitsch PetscCall(PetscHSetIDel(label->ht[v], point)); 11253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1126c58f1c22SToby Isaac } 1127c58f1c22SToby Isaac 1128c58f1c22SToby Isaac /*@ 112920f4b53cSBarry Smith DMLabelInsertIS - Set all points in the `IS` to a value 1130c58f1c22SToby Isaac 113120f4b53cSBarry Smith Not Collective 11325b5e7992SMatthew G. Knepley 1133c58f1c22SToby Isaac Input Parameters: 113420f4b53cSBarry Smith + label - the `DMLabel` 11352fe279fdSBarry Smith . is - the point `IS` 1136c58f1c22SToby Isaac - value - The point value 1137c58f1c22SToby Isaac 1138c58f1c22SToby Isaac Level: intermediate 1139c58f1c22SToby Isaac 114020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 1141c58f1c22SToby Isaac @*/ 1142d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelInsertIS(DMLabel label, IS is, PetscInt value) 1143d71ae5a4SJacob Faibussowitsch { 11440c3c4a36SLisandro Dalcin PetscInt v, n, p; 1145c58f1c22SToby Isaac const PetscInt *points; 1146c58f1c22SToby Isaac 1147c58f1c22SToby Isaac PetscFunctionBegin; 1148d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1149c58f1c22SToby Isaac PetscValidHeaderSpecific(is, IS_CLASSID, 2); 11500c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 11513ba16761SJacob Faibussowitsch if (value == label->defaultValue) PetscFunctionReturn(PETSC_SUCCESS); 11529f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 11539566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 11540c3c4a36SLisandro Dalcin /* Set keys */ 11559566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 11569566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is, &n)); 11579566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &points)); 11589566063dSJacob Faibussowitsch for (p = 0; p < n; ++p) PetscCall(PetscHSetIAdd(label->ht[v], points[p])); 11599566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &points)); 11603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1161c58f1c22SToby Isaac } 1162c58f1c22SToby Isaac 116384f0b6dfSMatthew G. Knepley /*@ 116420f4b53cSBarry Smith DMLabelGetNumValues - Get the number of values that the `DMLabel` takes 116584f0b6dfSMatthew G. Knepley 116620f4b53cSBarry Smith Not Collective 11675b5e7992SMatthew G. Knepley 116884f0b6dfSMatthew G. Knepley Input Parameter: 116920f4b53cSBarry Smith . label - the `DMLabel` 117084f0b6dfSMatthew G. Knepley 117101d2d390SJose E. Roman Output Parameter: 117284f0b6dfSMatthew G. Knepley . numValues - the number of values 117384f0b6dfSMatthew G. Knepley 117484f0b6dfSMatthew G. Knepley Level: intermediate 117584f0b6dfSMatthew G. Knepley 117620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 117784f0b6dfSMatthew G. Knepley @*/ 1178d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetNumValues(DMLabel label, PetscInt *numValues) 1179d71ae5a4SJacob Faibussowitsch { 1180c58f1c22SToby Isaac PetscFunctionBegin; 1181d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 11824f572ea9SToby Isaac PetscAssertPointer(numValues, 2); 1183c58f1c22SToby Isaac *numValues = label->numStrata; 11843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1185c58f1c22SToby Isaac } 1186c58f1c22SToby Isaac 118784f0b6dfSMatthew G. Knepley /*@ 118820f4b53cSBarry Smith DMLabelGetValueIS - Get an `IS` of all values that the `DMlabel` takes 118984f0b6dfSMatthew G. Knepley 119020f4b53cSBarry Smith Not Collective 11915b5e7992SMatthew G. Knepley 119284f0b6dfSMatthew G. Knepley Input Parameter: 119320f4b53cSBarry Smith . label - the `DMLabel` 119484f0b6dfSMatthew G. Knepley 119501d2d390SJose E. Roman Output Parameter: 119660225df5SJacob Faibussowitsch . values - the value `IS` 119784f0b6dfSMatthew G. Knepley 119884f0b6dfSMatthew G. Knepley Level: intermediate 119984f0b6dfSMatthew G. Knepley 12001d04cbbeSVaclav Hapla Notes: 120120f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 120220f4b53cSBarry Smith Strata which are allocated but empty [`DMLabelGetStratumSize()` yields 0] are counted. 120320f4b53cSBarry Smith If you need to count only nonempty strata, use `DMLabelGetNonEmptyStratumValuesIS()`. 12041d04cbbeSVaclav Hapla 120520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetNonEmptyStratumValuesIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 120684f0b6dfSMatthew G. Knepley @*/ 1207d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValueIS(DMLabel label, IS *values) 1208d71ae5a4SJacob Faibussowitsch { 1209c58f1c22SToby Isaac PetscFunctionBegin; 1210d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12114f572ea9SToby Isaac PetscAssertPointer(values, 2); 12129566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values)); 12133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1214c58f1c22SToby Isaac } 1215c58f1c22SToby Isaac 121684f0b6dfSMatthew G. Knepley /*@ 12178696263dSMatthew G. Knepley DMLabelGetValueBounds - Return the smallest and largest value in the label 12188696263dSMatthew G. Knepley 12198696263dSMatthew G. Knepley Not Collective 12208696263dSMatthew G. Knepley 12218696263dSMatthew G. Knepley Input Parameter: 12228696263dSMatthew G. Knepley . label - the `DMLabel` 12238696263dSMatthew G. Knepley 12248696263dSMatthew G. Knepley Output Parameters: 12258696263dSMatthew G. Knepley + minValue - The smallest value 12268696263dSMatthew G. Knepley - maxValue - The largest value 12278696263dSMatthew G. Knepley 12288696263dSMatthew G. Knepley Level: intermediate 12298696263dSMatthew G. Knepley 12308696263dSMatthew G. Knepley .seealso: `DMLabel`, `DM`, `DMLabelGetBounds()`, `DMLabelGetValue()`, `DMLabelSetValue()` 12318696263dSMatthew G. Knepley @*/ 12328696263dSMatthew G. Knepley PetscErrorCode DMLabelGetValueBounds(DMLabel label, PetscInt *minValue, PetscInt *maxValue) 12338696263dSMatthew G. Knepley { 12341690c2aeSBarry Smith PetscInt min = PETSC_INT_MAX, max = PETSC_INT_MIN; 12358696263dSMatthew G. Knepley 12368696263dSMatthew G. Knepley PetscFunctionBegin; 12378696263dSMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12388696263dSMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 12398696263dSMatthew G. Knepley min = PetscMin(min, label->stratumValues[v]); 12408696263dSMatthew G. Knepley max = PetscMax(max, label->stratumValues[v]); 12418696263dSMatthew G. Knepley } 12428696263dSMatthew G. Knepley if (minValue) { 12438696263dSMatthew G. Knepley PetscAssertPointer(minValue, 2); 12448696263dSMatthew G. Knepley *minValue = min; 12458696263dSMatthew G. Knepley } 12468696263dSMatthew G. Knepley if (maxValue) { 12478696263dSMatthew G. Knepley PetscAssertPointer(maxValue, 3); 12488696263dSMatthew G. Knepley *maxValue = max; 12498696263dSMatthew G. Knepley } 12508696263dSMatthew G. Knepley PetscFunctionReturn(PETSC_SUCCESS); 12518696263dSMatthew G. Knepley } 12528696263dSMatthew G. Knepley 12538696263dSMatthew G. Knepley /*@ 125420f4b53cSBarry Smith DMLabelGetNonEmptyStratumValuesIS - Get an `IS` of all values that the `DMlabel` takes 12551d04cbbeSVaclav Hapla 125620f4b53cSBarry Smith Not Collective 12571d04cbbeSVaclav Hapla 12581d04cbbeSVaclav Hapla Input Parameter: 125920f4b53cSBarry Smith . label - the `DMLabel` 12601d04cbbeSVaclav Hapla 1261d5b43468SJose E. Roman Output Parameter: 126260225df5SJacob Faibussowitsch . values - the value `IS` 12631d04cbbeSVaclav Hapla 12641d04cbbeSVaclav Hapla Level: intermediate 12651d04cbbeSVaclav Hapla 12661d04cbbeSVaclav Hapla Notes: 126720f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 126820f4b53cSBarry Smith This is similar to `DMLabelGetValueIS()` but counts only nonempty strata. 12691d04cbbeSVaclav Hapla 127020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 12711d04cbbeSVaclav Hapla @*/ 1272d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetNonEmptyStratumValuesIS(DMLabel label, IS *values) 1273d71ae5a4SJacob Faibussowitsch { 12741d04cbbeSVaclav Hapla PetscInt i, j; 12751d04cbbeSVaclav Hapla PetscInt *valuesArr; 12761d04cbbeSVaclav Hapla 12771d04cbbeSVaclav Hapla PetscFunctionBegin; 12781d04cbbeSVaclav Hapla PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12794f572ea9SToby Isaac PetscAssertPointer(values, 2); 12809566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &valuesArr)); 12811d04cbbeSVaclav Hapla for (i = 0, j = 0; i < label->numStrata; i++) { 12821d04cbbeSVaclav Hapla PetscInt n; 12831d04cbbeSVaclav Hapla 12849566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(label, i, &n)); 12851d04cbbeSVaclav Hapla if (n) valuesArr[j++] = label->stratumValues[i]; 12861d04cbbeSVaclav Hapla } 12871d04cbbeSVaclav Hapla if (j == label->numStrata) { 12889566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values)); 12891d04cbbeSVaclav Hapla } else { 12909566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, j, valuesArr, PETSC_COPY_VALUES, values)); 12911d04cbbeSVaclav Hapla } 12929566063dSJacob Faibussowitsch PetscCall(PetscFree(valuesArr)); 12933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12941d04cbbeSVaclav Hapla } 12951d04cbbeSVaclav Hapla 12961d04cbbeSVaclav Hapla /*@ 129720f4b53cSBarry Smith DMLabelGetValueIndex - Get the index of a given value in the list of values for the `DMlabel`, or -1 if it is not present 1298d123abd9SMatthew G. Knepley 129920f4b53cSBarry Smith Not Collective 1300d123abd9SMatthew G. Knepley 1301d123abd9SMatthew G. Knepley Input Parameters: 130220f4b53cSBarry Smith + label - the `DMLabel` 130397bb3fdcSJose E. Roman - value - the value 1304d123abd9SMatthew G. Knepley 130501d2d390SJose E. Roman Output Parameter: 1306d123abd9SMatthew G. Knepley . index - the index of value in the list of values 1307d123abd9SMatthew G. Knepley 1308d123abd9SMatthew G. Knepley Level: intermediate 1309d123abd9SMatthew G. Knepley 131020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 1311d123abd9SMatthew G. Knepley @*/ 1312d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValueIndex(DMLabel label, PetscInt value, PetscInt *index) 1313d71ae5a4SJacob Faibussowitsch { 1314d123abd9SMatthew G. Knepley PetscInt v; 1315d123abd9SMatthew G. Knepley 1316d123abd9SMatthew G. Knepley PetscFunctionBegin; 1317d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13184f572ea9SToby Isaac PetscAssertPointer(index, 3); 1319d123abd9SMatthew G. Knepley /* Do not assume they are sorted */ 13209371c9d4SSatish Balay for (v = 0; v < label->numStrata; ++v) 13219371c9d4SSatish Balay if (label->stratumValues[v] == value) break; 1322d123abd9SMatthew G. Knepley if (v >= label->numStrata) *index = -1; 1323d123abd9SMatthew G. Knepley else *index = v; 13243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1325d123abd9SMatthew G. Knepley } 1326d123abd9SMatthew G. Knepley 1327d123abd9SMatthew G. Knepley /*@ 132884f0b6dfSMatthew G. Knepley DMLabelHasStratum - Determine whether points exist with the given value 132984f0b6dfSMatthew G. Knepley 133020f4b53cSBarry Smith Not Collective 13315b5e7992SMatthew G. Knepley 133284f0b6dfSMatthew G. Knepley Input Parameters: 133320f4b53cSBarry Smith + label - the `DMLabel` 133484f0b6dfSMatthew G. Knepley - value - the stratum value 133584f0b6dfSMatthew G. Knepley 133601d2d390SJose E. Roman Output Parameter: 133784f0b6dfSMatthew G. Knepley . exists - Flag saying whether points exist 133884f0b6dfSMatthew G. Knepley 133984f0b6dfSMatthew G. Knepley Level: intermediate 134084f0b6dfSMatthew G. Knepley 134120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 134284f0b6dfSMatthew G. Knepley @*/ 1343d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasStratum(DMLabel label, PetscInt value, PetscBool *exists) 1344d71ae5a4SJacob Faibussowitsch { 1345fada774cSMatthew G. Knepley PetscInt v; 1346fada774cSMatthew G. Knepley 1347fada774cSMatthew G. Knepley PetscFunctionBegin; 1348d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13494f572ea9SToby Isaac PetscAssertPointer(exists, 3); 13509566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 13510c3c4a36SLisandro Dalcin *exists = v < 0 ? PETSC_FALSE : PETSC_TRUE; 13523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1353fada774cSMatthew G. Knepley } 1354fada774cSMatthew G. Knepley 135584f0b6dfSMatthew G. Knepley /*@ 135684f0b6dfSMatthew G. Knepley DMLabelGetStratumSize - Get the size of a stratum 135784f0b6dfSMatthew G. Knepley 135820f4b53cSBarry Smith Not Collective 13595b5e7992SMatthew G. Knepley 136084f0b6dfSMatthew G. Knepley Input Parameters: 136120f4b53cSBarry Smith + label - the `DMLabel` 136284f0b6dfSMatthew G. Knepley - value - the stratum value 136384f0b6dfSMatthew G. Knepley 136401d2d390SJose E. Roman Output Parameter: 136584f0b6dfSMatthew G. Knepley . size - The number of points in the stratum 136684f0b6dfSMatthew G. Knepley 136784f0b6dfSMatthew G. Knepley Level: intermediate 136884f0b6dfSMatthew G. Knepley 136920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 137084f0b6dfSMatthew G. Knepley @*/ 1371d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumSize(DMLabel label, PetscInt value, PetscInt *size) 1372d71ae5a4SJacob Faibussowitsch { 1373c58f1c22SToby Isaac PetscInt v; 1374c58f1c22SToby Isaac 1375c58f1c22SToby Isaac PetscFunctionBegin; 1376d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13774f572ea9SToby Isaac PetscAssertPointer(size, 3); 13789566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 13799566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(label, v, size)); 13803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1381c58f1c22SToby Isaac } 1382c58f1c22SToby Isaac 138384f0b6dfSMatthew G. Knepley /*@ 138484f0b6dfSMatthew G. Knepley DMLabelGetStratumBounds - Get the largest and smallest point of a stratum 138584f0b6dfSMatthew G. Knepley 138620f4b53cSBarry Smith Not Collective 13875b5e7992SMatthew G. Knepley 138884f0b6dfSMatthew G. Knepley Input Parameters: 138920f4b53cSBarry Smith + label - the `DMLabel` 139084f0b6dfSMatthew G. Knepley - value - the stratum value 139184f0b6dfSMatthew G. Knepley 139201d2d390SJose E. Roman Output Parameters: 139384f0b6dfSMatthew G. Knepley + start - the smallest point in the stratum 139484f0b6dfSMatthew G. Knepley - end - the largest point in the stratum 139584f0b6dfSMatthew G. Knepley 139684f0b6dfSMatthew G. Knepley Level: intermediate 139784f0b6dfSMatthew G. Knepley 139820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 139984f0b6dfSMatthew G. Knepley @*/ 1400d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumBounds(DMLabel label, PetscInt value, PetscInt *start, PetscInt *end) 1401d71ae5a4SJacob Faibussowitsch { 14029f6c5813SMatthew G. Knepley IS is; 14030c3c4a36SLisandro Dalcin PetscInt v, min, max; 1404c58f1c22SToby Isaac 1405c58f1c22SToby Isaac PetscFunctionBegin; 1406d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 14079371c9d4SSatish Balay if (start) { 14084f572ea9SToby Isaac PetscAssertPointer(start, 3); 14099371c9d4SSatish Balay *start = -1; 14109371c9d4SSatish Balay } 14119371c9d4SSatish Balay if (end) { 14124f572ea9SToby Isaac PetscAssertPointer(end, 4); 14139371c9d4SSatish Balay *end = -1; 14149371c9d4SSatish Balay } 14159566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 14163ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 14179566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 14183ba16761SJacob Faibussowitsch if (label->stratumSizes[v] <= 0) PetscFunctionReturn(PETSC_SUCCESS); 14199f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 14209f6c5813SMatthew G. Knepley PetscCall(ISGetMinMax(is, &min, &max)); 14219f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 1422d6cb179aSToby Isaac if (start) *start = min; 1423d6cb179aSToby Isaac if (end) *end = max + 1; 14243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1425c58f1c22SToby Isaac } 1426c58f1c22SToby Isaac 142766976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelGetStratumIS_Concrete(DMLabel label, PetscInt v, IS *pointIS) 14289f6c5813SMatthew G. Knepley { 14299f6c5813SMatthew G. Knepley PetscFunctionBegin; 14309f6c5813SMatthew G. Knepley PetscCall(PetscObjectReference((PetscObject)label->points[v])); 14319f6c5813SMatthew G. Knepley *pointIS = label->points[v]; 14323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14339f6c5813SMatthew G. Knepley } 14349f6c5813SMatthew G. Knepley 143584f0b6dfSMatthew G. Knepley /*@ 143620f4b53cSBarry Smith DMLabelGetStratumIS - Get an `IS` with the stratum points 143784f0b6dfSMatthew G. Knepley 143820f4b53cSBarry Smith Not Collective 14395b5e7992SMatthew G. Knepley 144084f0b6dfSMatthew G. Knepley Input Parameters: 144120f4b53cSBarry Smith + label - the `DMLabel` 144284f0b6dfSMatthew G. Knepley - value - the stratum value 144384f0b6dfSMatthew G. Knepley 144401d2d390SJose E. Roman Output Parameter: 144584f0b6dfSMatthew G. Knepley . points - The stratum points 144684f0b6dfSMatthew G. Knepley 144784f0b6dfSMatthew G. Knepley Level: intermediate 144884f0b6dfSMatthew G. Knepley 1449593ce467SVaclav Hapla Notes: 145020f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 145120f4b53cSBarry Smith Returns `NULL` if the stratum is empty. 1452593ce467SVaclav Hapla 145320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 145484f0b6dfSMatthew G. Knepley @*/ 1455d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumIS(DMLabel label, PetscInt value, IS *points) 1456d71ae5a4SJacob Faibussowitsch { 1457c58f1c22SToby Isaac PetscInt v; 1458c58f1c22SToby Isaac 1459c58f1c22SToby Isaac PetscFunctionBegin; 1460d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 14614f572ea9SToby Isaac PetscAssertPointer(points, 3); 1462c58f1c22SToby Isaac *points = NULL; 14639566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 14643ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 14659566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 14669f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, points); 14673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1468c58f1c22SToby Isaac } 1469c58f1c22SToby Isaac 147084f0b6dfSMatthew G. Knepley /*@ 147120f4b53cSBarry Smith DMLabelSetStratumIS - Set the stratum points using an `IS` 147284f0b6dfSMatthew G. Knepley 147320f4b53cSBarry Smith Not Collective 14745b5e7992SMatthew G. Knepley 147584f0b6dfSMatthew G. Knepley Input Parameters: 147620f4b53cSBarry Smith + label - the `DMLabel` 147784f0b6dfSMatthew G. Knepley . value - the stratum value 147860225df5SJacob Faibussowitsch - is - The stratum points 147984f0b6dfSMatthew G. Knepley 148084f0b6dfSMatthew G. Knepley Level: intermediate 148184f0b6dfSMatthew G. Knepley 148220f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 148384f0b6dfSMatthew G. Knepley @*/ 1484d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetStratumIS(DMLabel label, PetscInt value, IS is) 1485d71ae5a4SJacob Faibussowitsch { 14860c3c4a36SLisandro Dalcin PetscInt v; 14874de306b1SToby Isaac 14884de306b1SToby Isaac PetscFunctionBegin; 1489d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1490d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(is, IS_CLASSID, 3); 14919f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 14929566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 14933ba16761SJacob Faibussowitsch if (is == label->points[v]) PetscFunctionReturn(PETSC_SUCCESS); 14949566063dSJacob Faibussowitsch PetscCall(DMLabelClearStratum(label, value)); 1495f4f49eeaSPierre Jolivet PetscCall(ISGetLocalSize(is, &label->stratumSizes[v])); 14969566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)is)); 1497f4f49eeaSPierre Jolivet PetscCall(ISDestroy(&label->points[v])); 14980c3c4a36SLisandro Dalcin label->points[v] = is; 14990c3c4a36SLisandro Dalcin label->validIS[v] = PETSC_TRUE; 15009566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 15014de306b1SToby Isaac if (label->bt) { 15024de306b1SToby Isaac const PetscInt *points; 15034de306b1SToby Isaac PetscInt p; 15044de306b1SToby Isaac 15059566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &points)); 15064de306b1SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 15074de306b1SToby Isaac const PetscInt point = points[p]; 15084de306b1SToby Isaac 150963a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 15109566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - label->pStart)); 15114de306b1SToby Isaac } 15124de306b1SToby Isaac } 15133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15144de306b1SToby Isaac } 15154de306b1SToby Isaac 151684f0b6dfSMatthew G. Knepley /*@ 151784f0b6dfSMatthew G. Knepley DMLabelClearStratum - Remove a stratum 15184de306b1SToby Isaac 151920f4b53cSBarry Smith Not Collective 15205b5e7992SMatthew G. Knepley 152184f0b6dfSMatthew G. Knepley Input Parameters: 152220f4b53cSBarry Smith + label - the `DMLabel` 152384f0b6dfSMatthew G. Knepley - value - the stratum value 152484f0b6dfSMatthew G. Knepley 152584f0b6dfSMatthew G. Knepley Level: intermediate 152684f0b6dfSMatthew G. Knepley 152720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 152884f0b6dfSMatthew G. Knepley @*/ 1529d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelClearStratum(DMLabel label, PetscInt value) 1530d71ae5a4SJacob Faibussowitsch { 1531c58f1c22SToby Isaac PetscInt v; 1532c58f1c22SToby Isaac 1533c58f1c22SToby Isaac PetscFunctionBegin; 1534d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 15359f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 15369566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 15373ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 15384de306b1SToby Isaac if (label->validIS[v]) { 15394de306b1SToby Isaac if (label->bt) { 1540c58f1c22SToby Isaac PetscInt i; 1541ad8374ffSToby Isaac const PetscInt *points; 1542c58f1c22SToby Isaac 15439566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 1544c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 1545ad8374ffSToby Isaac const PetscInt point = points[i]; 1546c58f1c22SToby Isaac 1547*f1d0ab6dSZach Atkins if (point >= label->pStart && point < label->pEnd) PetscCall(PetscBTClear(label->bt, point - label->pStart)); 1548c58f1c22SToby Isaac } 15499566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 1550c58f1c22SToby Isaac } 1551c58f1c22SToby Isaac label->stratumSizes[v] = 0; 15529566063dSJacob Faibussowitsch PetscCall(ISDestroy(&label->points[v])); 15539566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &label->points[v])); 15549566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)label->points[v], "indices")); 15559566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 1556c58f1c22SToby Isaac } else { 15579566063dSJacob Faibussowitsch PetscCall(PetscHSetIClear(label->ht[v])); 1558c58f1c22SToby Isaac } 15593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1560c58f1c22SToby Isaac } 1561c58f1c22SToby Isaac 156284f0b6dfSMatthew G. Knepley /*@ 1563412e9a14SMatthew G. Knepley DMLabelSetStratumBounds - Efficiently give a contiguous set of points a given label value 1564412e9a14SMatthew G. Knepley 156520f4b53cSBarry Smith Not Collective 1566412e9a14SMatthew G. Knepley 1567412e9a14SMatthew G. Knepley Input Parameters: 156820f4b53cSBarry Smith + label - The `DMLabel` 1569412e9a14SMatthew G. Knepley . value - The label value for all points 1570412e9a14SMatthew G. Knepley . pStart - The first point 1571412e9a14SMatthew G. Knepley - pEnd - A point beyond all marked points 1572412e9a14SMatthew G. Knepley 1573412e9a14SMatthew G. Knepley Level: intermediate 1574412e9a14SMatthew G. Knepley 157520f4b53cSBarry Smith Note: 157620f4b53cSBarry Smith The marks points are [`pStart`, `pEnd`), and only the bounds are stored. 157720f4b53cSBarry Smith 157820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetStratumIS()`, `DMLabelGetStratumIS()` 1579412e9a14SMatthew G. Knepley @*/ 1580d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetStratumBounds(DMLabel label, PetscInt value, PetscInt pStart, PetscInt pEnd) 1581d71ae5a4SJacob Faibussowitsch { 1582412e9a14SMatthew G. Knepley IS pIS; 1583412e9a14SMatthew G. Knepley 1584412e9a14SMatthew G. Knepley PetscFunctionBegin; 15859566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, pEnd - pStart, pStart, 1, &pIS)); 15869566063dSJacob Faibussowitsch PetscCall(DMLabelSetStratumIS(label, value, pIS)); 15879566063dSJacob Faibussowitsch PetscCall(ISDestroy(&pIS)); 15883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1589412e9a14SMatthew G. Knepley } 1590412e9a14SMatthew G. Knepley 1591412e9a14SMatthew G. Knepley /*@ 1592d123abd9SMatthew G. Knepley DMLabelGetStratumPointIndex - Get the index of a point in a given stratum 1593d123abd9SMatthew G. Knepley 159420f4b53cSBarry Smith Not Collective 1595d123abd9SMatthew G. Knepley 1596d123abd9SMatthew G. Knepley Input Parameters: 159720f4b53cSBarry Smith + label - The `DMLabel` 1598d123abd9SMatthew G. Knepley . value - The label value 1599d123abd9SMatthew G. Knepley - p - A point with this value 1600d123abd9SMatthew G. Knepley 1601d123abd9SMatthew G. Knepley Output Parameter: 1602d123abd9SMatthew G. Knepley . index - The index of this point in the stratum, or -1 if the point is not in the stratum or the stratum does not exist 1603d123abd9SMatthew G. Knepley 1604d123abd9SMatthew G. Knepley Level: intermediate 1605d123abd9SMatthew G. Knepley 160620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIndex()`, `DMLabelGetStratumIS()`, `DMLabelCreate()` 1607d123abd9SMatthew G. Knepley @*/ 1608d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumPointIndex(DMLabel label, PetscInt value, PetscInt p, PetscInt *index) 1609d71ae5a4SJacob Faibussowitsch { 16109f6c5813SMatthew G. Knepley IS pointIS; 1611d123abd9SMatthew G. Knepley PetscInt v; 1612d123abd9SMatthew G. Knepley 1613d123abd9SMatthew G. Knepley PetscFunctionBegin; 1614d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 16154f572ea9SToby Isaac PetscAssertPointer(index, 4); 1616d123abd9SMatthew G. Knepley *index = -1; 16179566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 16183ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 16199566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 16209f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &pointIS); 1621f622de60SMatthew G. Knepley PetscCall(ISLocate(pointIS, p, index)); 16229f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&pointIS)); 16233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1624d123abd9SMatthew G. Knepley } 1625d123abd9SMatthew G. Knepley 1626d123abd9SMatthew G. Knepley /*@ 162720f4b53cSBarry Smith DMLabelFilter - Remove all points outside of [`start`, `end`) 162884f0b6dfSMatthew G. Knepley 162920f4b53cSBarry Smith Not Collective 16305b5e7992SMatthew G. Knepley 163184f0b6dfSMatthew G. Knepley Input Parameters: 163220f4b53cSBarry Smith + label - the `DMLabel` 163322cd2cdaSVaclav Hapla . start - the first point kept 163422cd2cdaSVaclav Hapla - end - one more than the last point kept 163584f0b6dfSMatthew G. Knepley 163684f0b6dfSMatthew G. Knepley Level: intermediate 163784f0b6dfSMatthew G. Knepley 163820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 163984f0b6dfSMatthew G. Knepley @*/ 1640d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelFilter(DMLabel label, PetscInt start, PetscInt end) 1641d71ae5a4SJacob Faibussowitsch { 1642c58f1c22SToby Isaac PetscInt v; 1643c58f1c22SToby Isaac 1644c58f1c22SToby Isaac PetscFunctionBegin; 1645d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 16469f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 16479566063dSJacob Faibussowitsch PetscCall(DMLabelDestroyIndex(label)); 16489566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 16499f6c5813SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 16509f6c5813SMatthew G. Knepley PetscCall(ISGeneralFilter(label->points[v], start, end)); 16519f6c5813SMatthew G. Knepley PetscCall(ISGetLocalSize(label->points[v], &label->stratumSizes[v])); 16529f6c5813SMatthew G. Knepley } 16539566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, start, end)); 16543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1655c58f1c22SToby Isaac } 1656c58f1c22SToby Isaac 165784f0b6dfSMatthew G. Knepley /*@ 165884f0b6dfSMatthew G. Knepley DMLabelPermute - Create a new label with permuted points 165984f0b6dfSMatthew G. Knepley 166020f4b53cSBarry Smith Not Collective 16615b5e7992SMatthew G. Knepley 166284f0b6dfSMatthew G. Knepley Input Parameters: 166320f4b53cSBarry Smith + label - the `DMLabel` 166484f0b6dfSMatthew G. Knepley - permutation - the point permutation 166584f0b6dfSMatthew G. Knepley 166684f0b6dfSMatthew G. Knepley Output Parameter: 166760225df5SJacob Faibussowitsch . labelNew - the new label containing the permuted points 166884f0b6dfSMatthew G. Knepley 166984f0b6dfSMatthew G. Knepley Level: intermediate 167084f0b6dfSMatthew G. Knepley 167120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 167284f0b6dfSMatthew G. Knepley @*/ 1673d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPermute(DMLabel label, IS permutation, DMLabel *labelNew) 1674d71ae5a4SJacob Faibussowitsch { 1675c58f1c22SToby Isaac const PetscInt *perm; 1676c58f1c22SToby Isaac PetscInt numValues, numPoints, v, q; 1677c58f1c22SToby Isaac 1678c58f1c22SToby Isaac PetscFunctionBegin; 1679d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1680d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(permutation, IS_CLASSID, 2); 16819f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 16829566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 16839566063dSJacob Faibussowitsch PetscCall(DMLabelDuplicate(label, labelNew)); 16849566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(*labelNew, &numValues)); 16859566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(permutation, &numPoints)); 16869566063dSJacob Faibussowitsch PetscCall(ISGetIndices(permutation, &perm)); 1687c58f1c22SToby Isaac for (v = 0; v < numValues; ++v) { 1688c58f1c22SToby Isaac const PetscInt size = (*labelNew)->stratumSizes[v]; 1689ad8374ffSToby Isaac const PetscInt *points; 1690ad8374ffSToby Isaac PetscInt *pointsNew; 1691c58f1c22SToby Isaac 16929566063dSJacob Faibussowitsch PetscCall(ISGetIndices((*labelNew)->points[v], &points)); 16939f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(size, &pointsNew)); 1694c58f1c22SToby Isaac for (q = 0; q < size; ++q) { 1695ad8374ffSToby Isaac const PetscInt point = points[q]; 1696c58f1c22SToby Isaac 169763a3b9bcSJacob Faibussowitsch PetscCheck(!(point < 0) && !(point >= numPoints), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [0, %" PetscInt_FMT ") for the remapping", point, numPoints); 1698ad8374ffSToby Isaac pointsNew[q] = perm[point]; 1699c58f1c22SToby Isaac } 17009566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices((*labelNew)->points[v], &points)); 17019566063dSJacob Faibussowitsch PetscCall(PetscSortInt(size, pointsNew)); 170257508eceSPierre Jolivet PetscCall(ISDestroy(&(*labelNew)->points[v])); 1703fa8e8ae5SToby Isaac if (size > 0 && pointsNew[size - 1] == pointsNew[0] + size - 1) { 17049566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, size, pointsNew[0], 1, &((*labelNew)->points[v]))); 17059566063dSJacob Faibussowitsch PetscCall(PetscFree(pointsNew)); 1706fa8e8ae5SToby Isaac } else { 17079566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, size, pointsNew, PETSC_OWN_POINTER, &((*labelNew)->points[v]))); 1708fa8e8ae5SToby Isaac } 17099566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((*labelNew)->points[v]), "indices")); 1710c58f1c22SToby Isaac } 17119566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(permutation, &perm)); 1712c58f1c22SToby Isaac if (label->bt) { 17139566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 17149566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, label->pStart, label->pEnd)); 1715c58f1c22SToby Isaac } 17163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1717c58f1c22SToby Isaac } 1718c58f1c22SToby Isaac 17195552b385SBrandon /*@ 17205552b385SBrandon DMLabelPermuteValues - Permute the values in a label 17215552b385SBrandon 17225552b385SBrandon Not collective 17235552b385SBrandon 17245552b385SBrandon Input Parameters: 17255552b385SBrandon + label - the `DMLabel` 17265552b385SBrandon - permutation - the value permutation, permutation[old value] = new value 17275552b385SBrandon 17285552b385SBrandon Output Parameter: 17295552b385SBrandon . label - the `DMLabel` now with permuted values 17305552b385SBrandon 17315552b385SBrandon Note: 17325552b385SBrandon The modification is done in-place 17335552b385SBrandon 17345552b385SBrandon Level: intermediate 17355552b385SBrandon 17365552b385SBrandon .seealso: `DMLabelRewriteValues()`, `DMLabel`, `DM`, `DMLabelPermute()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 17375552b385SBrandon @*/ 17385552b385SBrandon PetscErrorCode DMLabelPermuteValues(DMLabel label, IS permutation) 17395552b385SBrandon { 17405552b385SBrandon PetscInt Nv, Np; 17415552b385SBrandon 17425552b385SBrandon PetscFunctionBegin; 17435552b385SBrandon PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 17445552b385SBrandon PetscValidHeaderSpecific(permutation, IS_CLASSID, 2); 17455552b385SBrandon PetscCall(DMLabelGetNumValues(label, &Nv)); 17465552b385SBrandon PetscCall(ISGetLocalSize(permutation, &Np)); 17475552b385SBrandon PetscCheck(Np == Nv, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_SIZ, "Permutation has size %" PetscInt_FMT " != %" PetscInt_FMT " number of label values", Np, Nv); 17485552b385SBrandon if (PetscDefined(USE_DEBUG)) { 17495552b385SBrandon PetscBool flg; 17505552b385SBrandon PetscCall(ISGetInfo(permutation, IS_PERMUTATION, IS_LOCAL, PETSC_TRUE, &flg)); 17515552b385SBrandon PetscCheck(flg, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "IS is not a permutation"); 17525552b385SBrandon } 17535552b385SBrandon PetscCall(DMLabelRewriteValues(label, permutation)); 17545552b385SBrandon PetscFunctionReturn(PETSC_SUCCESS); 17555552b385SBrandon } 17565552b385SBrandon 17575552b385SBrandon /*@ 17585552b385SBrandon DMLabelRewriteValues - Permute the values in a label, but some may be omitted 17595552b385SBrandon 17605552b385SBrandon Not collective 17615552b385SBrandon 17625552b385SBrandon Input Parameters: 17635552b385SBrandon + label - the `DMLabel` 17645552b385SBrandon - permutation - the value permutation, permutation[old value] = new value, but some maybe omitted 17655552b385SBrandon 17665552b385SBrandon Output Parameter: 17675552b385SBrandon . label - the `DMLabel` now with permuted values 17685552b385SBrandon 17695552b385SBrandon Note: 17705552b385SBrandon The modification is done in-place 17715552b385SBrandon 17725552b385SBrandon Level: intermediate 17735552b385SBrandon 17745552b385SBrandon .seealso: `DMLabelPermuteValues()`, `DMLabel`, `DM`, `DMLabelPermute()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 17755552b385SBrandon @*/ 17765552b385SBrandon PetscErrorCode DMLabelRewriteValues(DMLabel label, IS permutation) 17775552b385SBrandon { 17785552b385SBrandon const PetscInt *perm; 17795552b385SBrandon PetscInt Nv, Np; 17805552b385SBrandon 17815552b385SBrandon PetscFunctionBegin; 17825552b385SBrandon PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 17835552b385SBrandon PetscValidHeaderSpecific(permutation, IS_CLASSID, 2); 17845552b385SBrandon PetscCall(DMLabelMakeAllValid_Private(label)); 17855552b385SBrandon PetscCall(DMLabelGetNumValues(label, &Nv)); 17865552b385SBrandon PetscCall(ISGetLocalSize(permutation, &Np)); 17875552b385SBrandon PetscCheck(Np >= Nv, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_SIZ, "Permutation has size %" PetscInt_FMT " < %" PetscInt_FMT " number of label values", Np, Nv); 17885552b385SBrandon PetscCall(ISGetIndices(permutation, &perm)); 17895552b385SBrandon for (PetscInt v = 0; v < Nv; ++v) label->stratumValues[v] = perm[label->stratumValues[v]]; 17905552b385SBrandon PetscCall(ISRestoreIndices(permutation, &perm)); 17915552b385SBrandon PetscFunctionReturn(PETSC_SUCCESS); 17925552b385SBrandon } 17935552b385SBrandon 179466976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelDistribute_Internal(DMLabel label, PetscSF sf, PetscSection *leafSection, PetscInt **leafStrata) 1795d71ae5a4SJacob Faibussowitsch { 179626c55118SMichael Lange MPI_Comm comm; 1797eb30be1eSVaclav Hapla PetscInt s, l, nroots, nleaves, offset, size; 179826c55118SMichael Lange PetscInt *remoteOffsets, *rootStrata, *rootIdx; 179926c55118SMichael Lange PetscSection rootSection; 180026c55118SMichael Lange PetscSF labelSF; 180126c55118SMichael Lange 180226c55118SMichael Lange PetscFunctionBegin; 18039566063dSJacob Faibussowitsch if (label) PetscCall(DMLabelMakeAllValid_Private(label)); 18049566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 180526c55118SMichael Lange /* Build a section of stratum values per point, generate the according SF 180626c55118SMichael Lange and distribute point-wise stratum values to leaves. */ 18079566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, &nleaves, NULL, NULL)); 18089566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(comm, &rootSection)); 18099566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(rootSection, 0, nroots)); 181026c55118SMichael Lange if (label) { 181126c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1812ad8374ffSToby Isaac const PetscInt *points; 1813ad8374ffSToby Isaac 18149566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[s], &points)); 181548a46eb9SPierre Jolivet for (l = 0; l < label->stratumSizes[s]; l++) PetscCall(PetscSectionAddDof(rootSection, points[l], 1)); 18169566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[s], &points)); 181726c55118SMichael Lange } 181826c55118SMichael Lange } 18199566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUp(rootSection)); 182026c55118SMichael Lange /* Create a point-wise array of stratum values */ 18219566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(rootSection, &size)); 18229566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &rootStrata)); 18239566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &rootIdx)); 182426c55118SMichael Lange if (label) { 182526c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1826ad8374ffSToby Isaac const PetscInt *points; 1827ad8374ffSToby Isaac 18289566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[s], &points)); 182926c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1830ad8374ffSToby Isaac const PetscInt p = points[l]; 18319566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(rootSection, p, &offset)); 183226c55118SMichael Lange rootStrata[offset + rootIdx[p]++] = label->stratumValues[s]; 183326c55118SMichael Lange } 18349566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[s], &points)); 183526c55118SMichael Lange } 183626c55118SMichael Lange } 183726c55118SMichael Lange /* Build SF that maps label points to remote processes */ 18389566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(comm, leafSection)); 18399566063dSJacob Faibussowitsch PetscCall(PetscSFDistributeSection(sf, rootSection, &remoteOffsets, *leafSection)); 18409566063dSJacob Faibussowitsch PetscCall(PetscSFCreateSectionSF(sf, rootSection, remoteOffsets, *leafSection, &labelSF)); 18419566063dSJacob Faibussowitsch PetscCall(PetscFree(remoteOffsets)); 184226c55118SMichael Lange /* Send the strata for each point over the derived SF */ 18439566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(*leafSection, &size)); 18449566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, leafStrata)); 18459566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(labelSF, MPIU_INT, rootStrata, *leafStrata, MPI_REPLACE)); 18469566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(labelSF, MPIU_INT, rootStrata, *leafStrata, MPI_REPLACE)); 184726c55118SMichael Lange /* Clean up */ 18489566063dSJacob Faibussowitsch PetscCall(PetscFree(rootStrata)); 18499566063dSJacob Faibussowitsch PetscCall(PetscFree(rootIdx)); 18509566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&rootSection)); 18519566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&labelSF)); 18523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 185326c55118SMichael Lange } 185426c55118SMichael Lange 185584f0b6dfSMatthew G. Knepley /*@ 185620f4b53cSBarry Smith DMLabelDistribute - Create a new label pushed forward over the `PetscSF` 185784f0b6dfSMatthew G. Knepley 185820f4b53cSBarry Smith Collective 18595b5e7992SMatthew G. Knepley 186084f0b6dfSMatthew G. Knepley Input Parameters: 186120f4b53cSBarry Smith + label - the `DMLabel` 186284f0b6dfSMatthew G. Knepley - sf - the map from old to new distribution 186384f0b6dfSMatthew G. Knepley 186484f0b6dfSMatthew G. Knepley Output Parameter: 186560225df5SJacob Faibussowitsch . labelNew - the new redistributed label 186684f0b6dfSMatthew G. Knepley 186784f0b6dfSMatthew G. Knepley Level: intermediate 186884f0b6dfSMatthew G. Knepley 186920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 187084f0b6dfSMatthew G. Knepley @*/ 1871d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDistribute(DMLabel label, PetscSF sf, DMLabel *labelNew) 1872d71ae5a4SJacob Faibussowitsch { 1873c58f1c22SToby Isaac MPI_Comm comm; 187426c55118SMichael Lange PetscSection leafSection; 187526c55118SMichael Lange PetscInt p, pStart, pEnd, s, size, dof, offset, stratum; 187626c55118SMichael Lange PetscInt *leafStrata, *strataIdx; 1877ad8374ffSToby Isaac PetscInt **points; 1878d67d17b1SMatthew G. Knepley const char *lname = NULL; 1879c58f1c22SToby Isaac char *name; 1880835f2295SStefano Zampini PetscMPIInt nameSize; 1881e8f14785SLisandro Dalcin PetscHSetI stratumHash; 1882c58f1c22SToby Isaac size_t len = 0; 188326c55118SMichael Lange PetscMPIInt rank; 1884c58f1c22SToby Isaac 1885c58f1c22SToby Isaac PetscFunctionBegin; 1886d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 1887f018e600SMatthew G. Knepley if (label) { 1888f018e600SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 18899f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 18909566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 1891f018e600SMatthew G. Knepley } 18929566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 18939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 1894c58f1c22SToby Isaac /* Bcast name */ 1895dd400576SPatrick Sanan if (rank == 0) { 18969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &lname)); 18979566063dSJacob Faibussowitsch PetscCall(PetscStrlen(lname, &len)); 1898d67d17b1SMatthew G. Knepley } 1899835f2295SStefano Zampini PetscCall(PetscMPIIntCast(len, &nameSize)); 1900835f2295SStefano Zampini PetscCallMPI(MPI_Bcast(&nameSize, 1, MPI_INT, 0, comm)); 19019566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nameSize + 1, &name)); 19029566063dSJacob Faibussowitsch if (rank == 0) PetscCall(PetscArraycpy(name, lname, nameSize + 1)); 1903835f2295SStefano Zampini PetscCallMPI(MPI_Bcast(name, nameSize + 1, MPI_CHAR, 0, comm)); 19049566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PETSC_COMM_SELF, name, labelNew)); 19059566063dSJacob Faibussowitsch PetscCall(PetscFree(name)); 190677d236dfSMichael Lange /* Bcast defaultValue */ 1907dd400576SPatrick Sanan if (rank == 0) (*labelNew)->defaultValue = label->defaultValue; 19089566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&(*labelNew)->defaultValue, 1, MPIU_INT, 0, comm)); 190926c55118SMichael Lange /* Distribute stratum values over the SF and get the point mapping on the receiver */ 19109566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute_Internal(label, sf, &leafSection, &leafStrata)); 19115cbdf6fcSMichael Lange /* Determine received stratum values and initialise new label*/ 19129566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&stratumHash)); 19139566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(leafSection, &size)); 19149566063dSJacob Faibussowitsch for (p = 0; p < size; ++p) PetscCall(PetscHSetIAdd(stratumHash, leafStrata[p])); 19159566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(stratumHash, &(*labelNew)->numStrata)); 19169566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->validIS)); 1917ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) (*labelNew)->validIS[s] = PETSC_TRUE; 19189566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->stratumValues)); 19195cbdf6fcSMichael Lange /* Turn leafStrata into indices rather than stratum values */ 19205cbdf6fcSMichael Lange offset = 0; 19219566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetElems(stratumHash, &offset, (*labelNew)->stratumValues)); 19229566063dSJacob Faibussowitsch PetscCall(PetscSortInt((*labelNew)->numStrata, (*labelNew)->stratumValues)); 192348a46eb9SPierre Jolivet for (s = 0; s < (*labelNew)->numStrata; ++s) PetscCall(PetscHMapISet((*labelNew)->hmap, (*labelNew)->stratumValues[s], s)); 19245cbdf6fcSMichael Lange for (p = 0; p < size; ++p) { 1925231b9e6fSMatthew G. Knepley for (s = 0; s < (*labelNew)->numStrata; ++s) { 19269371c9d4SSatish Balay if (leafStrata[p] == (*labelNew)->stratumValues[s]) { 19279371c9d4SSatish Balay leafStrata[p] = s; 19289371c9d4SSatish Balay break; 19299371c9d4SSatish Balay } 19305cbdf6fcSMichael Lange } 19315cbdf6fcSMichael Lange } 1932c58f1c22SToby Isaac /* Rebuild the point strata on the receiver */ 19339566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->stratumSizes)); 19349566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(leafSection, &pStart, &pEnd)); 1935c58f1c22SToby Isaac for (p = pStart; p < pEnd; p++) { 19369566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(leafSection, p, &dof)); 19379566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(leafSection, p, &offset)); 1938ad540459SPierre Jolivet for (s = 0; s < dof; s++) (*labelNew)->stratumSizes[leafStrata[offset + s]]++; 1939c58f1c22SToby Isaac } 19409566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->ht)); 19419f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->points)); 19429f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1((*labelNew)->numStrata, &points)); 1943c58f1c22SToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) { 19449566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&(*labelNew)->ht[s])); 1945f4f49eeaSPierre Jolivet PetscCall(PetscMalloc1((*labelNew)->stratumSizes[s], &points[s])); 1946c58f1c22SToby Isaac } 1947c58f1c22SToby Isaac /* Insert points into new strata */ 19489566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &strataIdx)); 19499566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(leafSection, &pStart, &pEnd)); 1950c58f1c22SToby Isaac for (p = pStart; p < pEnd; p++) { 19519566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(leafSection, p, &dof)); 19529566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(leafSection, p, &offset)); 1953c58f1c22SToby Isaac for (s = 0; s < dof; s++) { 1954c58f1c22SToby Isaac stratum = leafStrata[offset + s]; 1955ad8374ffSToby Isaac points[stratum][strataIdx[stratum]++] = p; 1956c58f1c22SToby Isaac } 1957c58f1c22SToby Isaac } 1958ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; s++) { 1959f4f49eeaSPierre Jolivet PetscCall(ISCreateGeneral(PETSC_COMM_SELF, (*labelNew)->stratumSizes[s], &points[s][0], PETSC_OWN_POINTER, &((*labelNew)->points[s]))); 19609566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((*labelNew)->points[s]), "indices")); 1961ad8374ffSToby Isaac } 19629566063dSJacob Faibussowitsch PetscCall(PetscFree(points)); 19639566063dSJacob Faibussowitsch PetscCall(PetscHSetIDestroy(&stratumHash)); 19649566063dSJacob Faibussowitsch PetscCall(PetscFree(leafStrata)); 19659566063dSJacob Faibussowitsch PetscCall(PetscFree(strataIdx)); 19669566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&leafSection)); 19673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1968c58f1c22SToby Isaac } 1969c58f1c22SToby Isaac 19707937d9ceSMichael Lange /*@ 19717937d9ceSMichael Lange DMLabelGather - Gather all label values from leafs into roots 19727937d9ceSMichael Lange 197320f4b53cSBarry Smith Collective 19745b5e7992SMatthew G. Knepley 19757937d9ceSMichael Lange Input Parameters: 197620f4b53cSBarry Smith + label - the `DMLabel` 197720f4b53cSBarry Smith - sf - the `PetscSF` communication map 19787937d9ceSMichael Lange 19792fe279fdSBarry Smith Output Parameter: 198020f4b53cSBarry Smith . labelNew - the new `DMLabel` with localised leaf values 19817937d9ceSMichael Lange 19827937d9ceSMichael Lange Level: developer 19837937d9ceSMichael Lange 198420f4b53cSBarry Smith Note: 198520f4b53cSBarry Smith This is the inverse operation to `DMLabelDistribute()`. 19867937d9ceSMichael Lange 198720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDistribute()` 19887937d9ceSMichael Lange @*/ 1989d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGather(DMLabel label, PetscSF sf, DMLabel *labelNew) 1990d71ae5a4SJacob Faibussowitsch { 19917937d9ceSMichael Lange MPI_Comm comm; 19927937d9ceSMichael Lange PetscSection rootSection; 19937937d9ceSMichael Lange PetscSF sfLabel; 19947937d9ceSMichael Lange PetscSFNode *rootPoints, *leafPoints; 19957937d9ceSMichael Lange PetscInt p, s, d, nroots, nleaves, nmultiroots, idx, dof, offset; 19967937d9ceSMichael Lange const PetscInt *rootDegree, *ilocal; 19977937d9ceSMichael Lange PetscInt *rootStrata; 1998d67d17b1SMatthew G. Knepley const char *lname; 19997937d9ceSMichael Lange char *name; 2000835f2295SStefano Zampini PetscMPIInt nameSize; 20017937d9ceSMichael Lange size_t len = 0; 20029852e123SBarry Smith PetscMPIInt rank, size; 20037937d9ceSMichael Lange 20047937d9ceSMichael Lange PetscFunctionBegin; 2005d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 2006d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 20079f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 20089566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 20099566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 20109566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20117937d9ceSMichael Lange /* Bcast name */ 2012dd400576SPatrick Sanan if (rank == 0) { 20139566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &lname)); 20149566063dSJacob Faibussowitsch PetscCall(PetscStrlen(lname, &len)); 2015d67d17b1SMatthew G. Knepley } 2016835f2295SStefano Zampini PetscCall(PetscMPIIntCast(len, &nameSize)); 2017835f2295SStefano Zampini PetscCallMPI(MPI_Bcast(&nameSize, 1, MPI_INT, 0, comm)); 20189566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nameSize + 1, &name)); 20199566063dSJacob Faibussowitsch if (rank == 0) PetscCall(PetscArraycpy(name, lname, nameSize + 1)); 2020835f2295SStefano Zampini PetscCallMPI(MPI_Bcast(name, nameSize + 1, MPI_CHAR, 0, comm)); 20219566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PETSC_COMM_SELF, name, labelNew)); 20229566063dSJacob Faibussowitsch PetscCall(PetscFree(name)); 20237937d9ceSMichael Lange /* Gather rank/index pairs of leaves into local roots to build 20247937d9ceSMichael Lange an inverse, multi-rooted SF. Note that this ignores local leaf 20257937d9ceSMichael Lange indexing due to the use of the multiSF in PetscSFGather. */ 20269566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, &nleaves, &ilocal, NULL)); 20279566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nroots, &leafPoints)); 2028dc53bc9bSMatthew G. Knepley for (p = 0; p < nroots; ++p) leafPoints[p].rank = leafPoints[p].index = -1; 20297937d9ceSMichael Lange for (p = 0; p < nleaves; p++) { 20308212dd46SStefano Zampini PetscInt ilp = ilocal ? ilocal[p] : p; 20318212dd46SStefano Zampini 20328212dd46SStefano Zampini leafPoints[ilp].index = ilp; 20338212dd46SStefano Zampini leafPoints[ilp].rank = rank; 20347937d9ceSMichael Lange } 20359566063dSJacob Faibussowitsch PetscCall(PetscSFComputeDegreeBegin(sf, &rootDegree)); 20369566063dSJacob Faibussowitsch PetscCall(PetscSFComputeDegreeEnd(sf, &rootDegree)); 20377937d9ceSMichael Lange for (p = 0, nmultiroots = 0; p < nroots; ++p) nmultiroots += rootDegree[p]; 20389566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nmultiroots, &rootPoints)); 20396497c311SBarry Smith PetscCall(PetscSFGatherBegin(sf, MPIU_SF_NODE, leafPoints, rootPoints)); 20406497c311SBarry Smith PetscCall(PetscSFGatherEnd(sf, MPIU_SF_NODE, leafPoints, rootPoints)); 20419566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(comm, &sfLabel)); 20429566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraph(sfLabel, nroots, nmultiroots, NULL, PETSC_OWN_POINTER, rootPoints, PETSC_OWN_POINTER)); 20437937d9ceSMichael Lange /* Migrate label over inverted SF to pull stratum values at leaves into roots. */ 20449566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute_Internal(label, sfLabel, &rootSection, &rootStrata)); 20457937d9ceSMichael Lange /* Rebuild the point strata on the receiver */ 20467937d9ceSMichael Lange for (p = 0, idx = 0; p < nroots; p++) { 20477937d9ceSMichael Lange for (d = 0; d < rootDegree[p]; d++) { 20489566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(rootSection, idx + d, &dof)); 20499566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(rootSection, idx + d, &offset)); 20509566063dSJacob Faibussowitsch for (s = 0; s < dof; s++) PetscCall(DMLabelSetValue(*labelNew, p, rootStrata[offset + s])); 20517937d9ceSMichael Lange } 20527937d9ceSMichael Lange idx += rootDegree[p]; 20537937d9ceSMichael Lange } 20549566063dSJacob Faibussowitsch PetscCall(PetscFree(leafPoints)); 20559566063dSJacob Faibussowitsch PetscCall(PetscFree(rootStrata)); 20569566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&rootSection)); 20579566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&sfLabel)); 20583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20597937d9ceSMichael Lange } 20607937d9ceSMichael Lange 2061d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelPropagateInit_Internal(DMLabel label, PetscSF pointSF, PetscInt valArray[]) 2062d71ae5a4SJacob Faibussowitsch { 2063d42890abSMatthew G. Knepley const PetscInt *degree; 2064d42890abSMatthew G. Knepley const PetscInt *points; 2065d42890abSMatthew G. Knepley PetscInt Nr, r, Nl, l, val, defVal; 2066d42890abSMatthew G. Knepley 2067d42890abSMatthew G. Knepley PetscFunctionBegin; 2068d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2069d42890abSMatthew G. Knepley /* Add in leaves */ 2070d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, &Nl, &points, NULL)); 2071d42890abSMatthew G. Knepley for (l = 0; l < Nl; ++l) { 2072d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, points[l], &val)); 2073d42890abSMatthew G. Knepley if (val != defVal) valArray[points[l]] = val; 2074d42890abSMatthew G. Knepley } 2075d42890abSMatthew G. Knepley /* Add in shared roots */ 2076d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeBegin(pointSF, °ree)); 2077d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeEnd(pointSF, °ree)); 2078d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) { 2079d42890abSMatthew G. Knepley if (degree[r]) { 2080d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, r, &val)); 2081d42890abSMatthew G. Knepley if (val != defVal) valArray[r] = val; 2082d42890abSMatthew G. Knepley } 2083d42890abSMatthew G. Knepley } 20843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2085d42890abSMatthew G. Knepley } 2086d42890abSMatthew G. Knepley 2087d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelPropagateFini_Internal(DMLabel label, PetscSF pointSF, PetscInt valArray[], PetscErrorCode (*markPoint)(DMLabel, PetscInt, PetscInt, void *), void *ctx) 2088d71ae5a4SJacob Faibussowitsch { 2089d42890abSMatthew G. Knepley const PetscInt *degree; 2090d42890abSMatthew G. Knepley const PetscInt *points; 2091d42890abSMatthew G. Knepley PetscInt Nr, r, Nl, l, val, defVal; 2092d42890abSMatthew G. Knepley 2093d42890abSMatthew G. Knepley PetscFunctionBegin; 2094d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2095d42890abSMatthew G. Knepley /* Read out leaves */ 2096d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, &Nl, &points, NULL)); 2097d42890abSMatthew G. Knepley for (l = 0; l < Nl; ++l) { 2098d42890abSMatthew G. Knepley const PetscInt p = points[l]; 2099d42890abSMatthew G. Knepley const PetscInt cval = valArray[p]; 2100d42890abSMatthew G. Knepley 2101d42890abSMatthew G. Knepley if (cval != defVal) { 2102d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, p, &val)); 2103d42890abSMatthew G. Knepley if (val == defVal) { 2104d42890abSMatthew G. Knepley PetscCall(DMLabelSetValue(label, p, cval)); 210548a46eb9SPierre Jolivet if (markPoint) PetscCall((*markPoint)(label, p, cval, ctx)); 2106d42890abSMatthew G. Knepley } 2107d42890abSMatthew G. Knepley } 2108d42890abSMatthew G. Knepley } 2109d42890abSMatthew G. Knepley /* Read out shared roots */ 2110d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeBegin(pointSF, °ree)); 2111d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeEnd(pointSF, °ree)); 2112d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) { 2113d42890abSMatthew G. Knepley if (degree[r]) { 2114d42890abSMatthew G. Knepley const PetscInt cval = valArray[r]; 2115d42890abSMatthew G. Knepley 2116d42890abSMatthew G. Knepley if (cval != defVal) { 2117d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, r, &val)); 2118d42890abSMatthew G. Knepley if (val == defVal) { 2119d42890abSMatthew G. Knepley PetscCall(DMLabelSetValue(label, r, cval)); 212048a46eb9SPierre Jolivet if (markPoint) PetscCall((*markPoint)(label, r, cval, ctx)); 2121d42890abSMatthew G. Knepley } 2122d42890abSMatthew G. Knepley } 2123d42890abSMatthew G. Knepley } 2124d42890abSMatthew G. Knepley } 21253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2126d42890abSMatthew G. Knepley } 2127d42890abSMatthew G. Knepley 2128d42890abSMatthew G. Knepley /*@ 2129d42890abSMatthew G. Knepley DMLabelPropagateBegin - Setup a cycle of label propagation 2130d42890abSMatthew G. Knepley 213120f4b53cSBarry Smith Collective 2132d42890abSMatthew G. Knepley 2133d42890abSMatthew G. Knepley Input Parameters: 213420f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 213520f4b53cSBarry Smith - sf - The `PetscSF` describing parallel layout of the label points 2136d42890abSMatthew G. Knepley 2137d42890abSMatthew G. Knepley Level: intermediate 2138d42890abSMatthew G. Knepley 213920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateEnd()`, `DMLabelPropagatePush()` 2140d42890abSMatthew G. Knepley @*/ 2141d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPropagateBegin(DMLabel label, PetscSF sf) 2142d71ae5a4SJacob Faibussowitsch { 2143d42890abSMatthew G. Knepley PetscInt Nr, r, defVal; 2144d42890abSMatthew G. Knepley PetscMPIInt size; 2145d42890abSMatthew G. Knepley 2146d42890abSMatthew G. Knepley PetscFunctionBegin; 21479f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2148d42890abSMatthew G. Knepley PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)sf), &size)); 2149d42890abSMatthew G. Knepley if (size > 1) { 2150d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2151d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(sf, &Nr, NULL, NULL, NULL)); 2152d42890abSMatthew G. Knepley if (Nr >= 0) PetscCall(PetscMalloc1(Nr, &label->propArray)); 2153d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) label->propArray[r] = defVal; 2154d42890abSMatthew G. Knepley } 21553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2156d42890abSMatthew G. Knepley } 2157d42890abSMatthew G. Knepley 2158d42890abSMatthew G. Knepley /*@ 2159d42890abSMatthew G. Knepley DMLabelPropagateEnd - Tear down a cycle of label propagation 2160d42890abSMatthew G. Knepley 216120f4b53cSBarry Smith Collective 2162d42890abSMatthew G. Knepley 2163d42890abSMatthew G. Knepley Input Parameters: 216420f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 216560225df5SJacob Faibussowitsch - pointSF - The `PetscSF` describing parallel layout of the label points 2166d42890abSMatthew G. Knepley 2167d42890abSMatthew G. Knepley Level: intermediate 2168d42890abSMatthew G. Knepley 216920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateBegin()`, `DMLabelPropagatePush()` 2170d42890abSMatthew G. Knepley @*/ 2171d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPropagateEnd(DMLabel label, PetscSF pointSF) 2172d71ae5a4SJacob Faibussowitsch { 2173d42890abSMatthew G. Knepley PetscFunctionBegin; 21749f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2175d42890abSMatthew G. Knepley PetscCall(PetscFree(label->propArray)); 2176d42890abSMatthew G. Knepley label->propArray = NULL; 21773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2178d42890abSMatthew G. Knepley } 2179d42890abSMatthew G. Knepley 2180d42890abSMatthew G. Knepley /*@C 2181d42890abSMatthew G. Knepley DMLabelPropagatePush - Tear down a cycle of label propagation 2182d42890abSMatthew G. Knepley 218320f4b53cSBarry Smith Collective 2184d42890abSMatthew G. Knepley 2185d42890abSMatthew G. Knepley Input Parameters: 218620f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 2187a4e35b19SJacob Faibussowitsch . pointSF - The `PetscSF` describing parallel layout of the label points 218820f4b53cSBarry Smith . markPoint - An optional callback that is called when a point is marked, or `NULL` 218920f4b53cSBarry Smith - ctx - An optional user context for the callback, or `NULL` 2190d42890abSMatthew G. Knepley 219120f4b53cSBarry Smith Calling sequence of `markPoint`: 219220f4b53cSBarry Smith + label - The `DMLabel` 2193d42890abSMatthew G. Knepley . p - The point being marked 2194a4e35b19SJacob Faibussowitsch . val - The label value for `p` 2195d42890abSMatthew G. Knepley - ctx - An optional user context 2196d42890abSMatthew G. Knepley 2197d42890abSMatthew G. Knepley Level: intermediate 2198d42890abSMatthew G. Knepley 219920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateBegin()`, `DMLabelPropagateEnd()` 2200d42890abSMatthew G. Knepley @*/ 2201a4e35b19SJacob Faibussowitsch PetscErrorCode DMLabelPropagatePush(DMLabel label, PetscSF pointSF, PetscErrorCode (*markPoint)(DMLabel label, PetscInt p, PetscInt val, void *ctx), void *ctx) 2202d71ae5a4SJacob Faibussowitsch { 2203c50b2d26SMatthew G. Knepley PetscInt *valArray = label->propArray, Nr; 2204d42890abSMatthew G. Knepley PetscMPIInt size; 2205d42890abSMatthew G. Knepley 2206d42890abSMatthew G. Knepley PetscFunctionBegin; 22079f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2208d42890abSMatthew G. Knepley PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)pointSF), &size)); 2209c50b2d26SMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, NULL, NULL, NULL)); 2210c50b2d26SMatthew G. Knepley if (size > 1 && Nr >= 0) { 2211d42890abSMatthew G. Knepley /* Communicate marked edges 2212d42890abSMatthew G. Knepley The current implementation allocates an array the size of the number of root. We put the label values into the 2213d42890abSMatthew G. Knepley array, and then call PetscSFReduce()+PetscSFBcast() to make the marks consistent. 2214d42890abSMatthew G. Knepley 2215d42890abSMatthew G. Knepley TODO: We could use in-place communication with a different SF 2216d42890abSMatthew G. Knepley We use MPI_SUM for the Reduce, and check the result against the rootdegree. If sum >= rootdegree+1, then the edge has 2217d42890abSMatthew G. Knepley already been marked. If not, it might have been handled on the process in this round, but we add it anyway. 2218d42890abSMatthew G. Knepley 2219d42890abSMatthew G. Knepley In order to update the queue with the new edges from the label communication, we use BcastAnOp(MPI_SUM), so that new 2220d42890abSMatthew G. Knepley values will have 1+0=1 and old values will have 1+1=2. Loop over these, resetting the values to 1, and adding any new 2221d42890abSMatthew G. Knepley edge to the queue. 2222d42890abSMatthew G. Knepley */ 2223d42890abSMatthew G. Knepley PetscCall(DMLabelPropagateInit_Internal(label, pointSF, valArray)); 2224d42890abSMatthew G. Knepley PetscCall(PetscSFReduceBegin(pointSF, MPIU_INT, valArray, valArray, MPI_MAX)); 2225d42890abSMatthew G. Knepley PetscCall(PetscSFReduceEnd(pointSF, MPIU_INT, valArray, valArray, MPI_MAX)); 2226d42890abSMatthew G. Knepley PetscCall(PetscSFBcastBegin(pointSF, MPIU_INT, valArray, valArray, MPI_REPLACE)); 2227d42890abSMatthew G. Knepley PetscCall(PetscSFBcastEnd(pointSF, MPIU_INT, valArray, valArray, MPI_REPLACE)); 2228d42890abSMatthew G. Knepley PetscCall(DMLabelPropagateFini_Internal(label, pointSF, valArray, markPoint, ctx)); 2229d42890abSMatthew G. Knepley } 22303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2231d42890abSMatthew G. Knepley } 2232d42890abSMatthew G. Knepley 223384f0b6dfSMatthew G. Knepley /*@ 223420f4b53cSBarry Smith DMLabelConvertToSection - Make a `PetscSection`/`IS` pair that encodes the label 223584f0b6dfSMatthew G. Knepley 223620f4b53cSBarry Smith Not Collective 22375b5e7992SMatthew G. Knepley 223884f0b6dfSMatthew G. Knepley Input Parameter: 223920f4b53cSBarry Smith . label - the `DMLabel` 224084f0b6dfSMatthew G. Knepley 224184f0b6dfSMatthew G. Knepley Output Parameters: 224284f0b6dfSMatthew G. Knepley + section - the section giving offsets for each stratum 224320f4b53cSBarry Smith - is - An `IS` containing all the label points 224484f0b6dfSMatthew G. Knepley 224584f0b6dfSMatthew G. Knepley Level: developer 224684f0b6dfSMatthew G. Knepley 224720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDistribute()` 224884f0b6dfSMatthew G. Knepley @*/ 2249d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelConvertToSection(DMLabel label, PetscSection *section, IS *is) 2250d71ae5a4SJacob Faibussowitsch { 2251c58f1c22SToby Isaac IS vIS; 2252c58f1c22SToby Isaac const PetscInt *values; 2253c58f1c22SToby Isaac PetscInt *points; 2254c58f1c22SToby Isaac PetscInt nV, vS = 0, vE = 0, v, N; 2255c58f1c22SToby Isaac 2256c58f1c22SToby Isaac PetscFunctionBegin; 2257d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 22589566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(label, &nV)); 22599566063dSJacob Faibussowitsch PetscCall(DMLabelGetValueIS(label, &vIS)); 22609566063dSJacob Faibussowitsch PetscCall(ISGetIndices(vIS, &values)); 22619371c9d4SSatish Balay if (nV) { 22629371c9d4SSatish Balay vS = values[0]; 22639371c9d4SSatish Balay vE = values[0] + 1; 22649371c9d4SSatish Balay } 2265c58f1c22SToby Isaac for (v = 1; v < nV; ++v) { 2266c58f1c22SToby Isaac vS = PetscMin(vS, values[v]); 2267c58f1c22SToby Isaac vE = PetscMax(vE, values[v] + 1); 2268c58f1c22SToby Isaac } 22699566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(PETSC_COMM_SELF, section)); 22709566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(*section, vS, vE)); 2271c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 2272c58f1c22SToby Isaac PetscInt n; 2273c58f1c22SToby Isaac 22749566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize(label, values[v], &n)); 22759566063dSJacob Faibussowitsch PetscCall(PetscSectionSetDof(*section, values[v], n)); 2276c58f1c22SToby Isaac } 22779566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUp(*section)); 22789566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(*section, &N)); 22799566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(N, &points)); 2280c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 2281c58f1c22SToby Isaac IS is; 2282c58f1c22SToby Isaac const PetscInt *spoints; 2283c58f1c22SToby Isaac PetscInt dof, off, p; 2284c58f1c22SToby Isaac 22859566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(*section, values[v], &dof)); 22869566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(*section, values[v], &off)); 22879566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(label, values[v], &is)); 22889566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &spoints)); 2289c58f1c22SToby Isaac for (p = 0; p < dof; ++p) points[off + p] = spoints[p]; 22909566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &spoints)); 22919566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is)); 2292c58f1c22SToby Isaac } 22939566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(vIS, &values)); 22949566063dSJacob Faibussowitsch PetscCall(ISDestroy(&vIS)); 22959566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, N, points, PETSC_OWN_POINTER, is)); 22963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2297c58f1c22SToby Isaac } 2298c58f1c22SToby Isaac 22999f6c5813SMatthew G. Knepley /*@C 23009f6c5813SMatthew G. Knepley DMLabelRegister - Adds a new label component implementation 23019f6c5813SMatthew G. Knepley 23029f6c5813SMatthew G. Knepley Not Collective 23039f6c5813SMatthew G. Knepley 23049f6c5813SMatthew G. Knepley Input Parameters: 23059f6c5813SMatthew G. Knepley + name - The name of a new user-defined creation routine 23069f6c5813SMatthew G. Knepley - create_func - The creation routine itself 23079f6c5813SMatthew G. Knepley 23089f6c5813SMatthew G. Knepley Notes: 23099f6c5813SMatthew G. Knepley `DMLabelRegister()` may be called multiple times to add several user-defined labels 23109f6c5813SMatthew G. Knepley 231160225df5SJacob Faibussowitsch Example Usage: 23129f6c5813SMatthew G. Knepley .vb 23139f6c5813SMatthew G. Knepley DMLabelRegister("my_label", MyLabelCreate); 23149f6c5813SMatthew G. Knepley .ve 23159f6c5813SMatthew G. Knepley 23169f6c5813SMatthew G. Knepley Then, your label type can be chosen with the procedural interface via 23179f6c5813SMatthew G. Knepley .vb 23189f6c5813SMatthew G. Knepley DMLabelCreate(MPI_Comm, DMLabel *); 23199f6c5813SMatthew G. Knepley DMLabelSetType(DMLabel, "my_label"); 23209f6c5813SMatthew G. Knepley .ve 23219f6c5813SMatthew G. Knepley or at runtime via the option 23229f6c5813SMatthew G. Knepley .vb 23239f6c5813SMatthew G. Knepley -dm_label_type my_label 23249f6c5813SMatthew G. Knepley .ve 23259f6c5813SMatthew G. Knepley 23269f6c5813SMatthew G. Knepley Level: advanced 23279f6c5813SMatthew G. Knepley 232860225df5SJacob Faibussowitsch .seealso: `DMLabel`, `DM`, `DMLabelType`, `DMLabelRegisterAll()`, `DMLabelRegisterDestroy()` 23299f6c5813SMatthew G. Knepley @*/ 23309f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegister(const char name[], PetscErrorCode (*create_func)(DMLabel)) 23319f6c5813SMatthew G. Knepley { 23329f6c5813SMatthew G. Knepley PetscFunctionBegin; 23339f6c5813SMatthew G. Knepley PetscCall(DMInitializePackage()); 23349f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListAdd(&DMLabelList, name, create_func)); 23353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23369f6c5813SMatthew G. Knepley } 23379f6c5813SMatthew G. Knepley 23389f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Concrete(DMLabel); 23399f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Ephemeral(DMLabel); 23409f6c5813SMatthew G. Knepley 23419f6c5813SMatthew G. Knepley /*@C 23429f6c5813SMatthew G. Knepley DMLabelRegisterAll - Registers all of the `DMLabel` implementations in the `DM` package. 23439f6c5813SMatthew G. Knepley 23449f6c5813SMatthew G. Knepley Not Collective 23459f6c5813SMatthew G. Knepley 23469f6c5813SMatthew G. Knepley Level: advanced 23479f6c5813SMatthew G. Knepley 234820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMRegisterAll()`, `DMLabelRegisterDestroy()` 23499f6c5813SMatthew G. Knepley @*/ 23509f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegisterAll(void) 23519f6c5813SMatthew G. Knepley { 23529f6c5813SMatthew G. Knepley PetscFunctionBegin; 23533ba16761SJacob Faibussowitsch if (DMLabelRegisterAllCalled) PetscFunctionReturn(PETSC_SUCCESS); 23549f6c5813SMatthew G. Knepley DMLabelRegisterAllCalled = PETSC_TRUE; 23559f6c5813SMatthew G. Knepley 23569f6c5813SMatthew G. Knepley PetscCall(DMLabelRegister(DMLABELCONCRETE, DMLabelCreate_Concrete)); 23579f6c5813SMatthew G. Knepley PetscCall(DMLabelRegister(DMLABELEPHEMERAL, DMLabelCreate_Ephemeral)); 23583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23599f6c5813SMatthew G. Knepley } 23609f6c5813SMatthew G. Knepley 23619f6c5813SMatthew G. Knepley /*@C 23629f6c5813SMatthew G. Knepley DMLabelRegisterDestroy - This function destroys the `DMLabel` registry. It is called from `PetscFinalize()`. 23639f6c5813SMatthew G. Knepley 23649f6c5813SMatthew G. Knepley Level: developer 23659f6c5813SMatthew G. Knepley 236620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscInitialize()` 23679f6c5813SMatthew G. Knepley @*/ 23689f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegisterDestroy(void) 23699f6c5813SMatthew G. Knepley { 23709f6c5813SMatthew G. Knepley PetscFunctionBegin; 23719f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListDestroy(&DMLabelList)); 23729f6c5813SMatthew G. Knepley DMLabelRegisterAllCalled = PETSC_FALSE; 23733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23749f6c5813SMatthew G. Knepley } 23759f6c5813SMatthew G. Knepley 2376cc4c1da9SBarry Smith /*@ 23779f6c5813SMatthew G. Knepley DMLabelSetType - Sets the particular implementation for a label. 23789f6c5813SMatthew G. Knepley 237920f4b53cSBarry Smith Collective 23809f6c5813SMatthew G. Knepley 23819f6c5813SMatthew G. Knepley Input Parameters: 23829f6c5813SMatthew G. Knepley + label - The label 23839f6c5813SMatthew G. Knepley - method - The name of the label type 23849f6c5813SMatthew G. Knepley 23859f6c5813SMatthew G. Knepley Options Database Key: 238620f4b53cSBarry Smith . -dm_label_type <type> - Sets the label type; use -help for a list of available types or see `DMLabelType` 23879f6c5813SMatthew G. Knepley 23889f6c5813SMatthew G. Knepley Level: intermediate 23899f6c5813SMatthew G. Knepley 239020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetType()`, `DMLabelCreate()` 23919f6c5813SMatthew G. Knepley @*/ 23929f6c5813SMatthew G. Knepley PetscErrorCode DMLabelSetType(DMLabel label, DMLabelType method) 23939f6c5813SMatthew G. Knepley { 23949f6c5813SMatthew G. Knepley PetscErrorCode (*r)(DMLabel); 23959f6c5813SMatthew G. Knepley PetscBool match; 23969f6c5813SMatthew G. Knepley 23979f6c5813SMatthew G. Knepley PetscFunctionBegin; 23989f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 23999f6c5813SMatthew G. Knepley PetscCall(PetscObjectTypeCompare((PetscObject)label, method, &match)); 24003ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS); 24019f6c5813SMatthew G. Knepley 24029f6c5813SMatthew G. Knepley PetscCall(DMLabelRegisterAll()); 24039f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListFind(DMLabelList, method, &r)); 24049f6c5813SMatthew G. Knepley PetscCheck(r, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown DMLabel type: %s", method); 24059f6c5813SMatthew G. Knepley 24069f6c5813SMatthew G. Knepley PetscTryTypeMethod(label, destroy); 24079f6c5813SMatthew G. Knepley PetscCall(PetscMemzero(label->ops, sizeof(*label->ops))); 24089f6c5813SMatthew G. Knepley PetscCall(PetscObjectChangeTypeName((PetscObject)label, method)); 24099f6c5813SMatthew G. Knepley PetscCall((*r)(label)); 24103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24119f6c5813SMatthew G. Knepley } 24129f6c5813SMatthew G. Knepley 2413cc4c1da9SBarry Smith /*@ 24149f6c5813SMatthew G. Knepley DMLabelGetType - Gets the type name (as a string) from the label. 24159f6c5813SMatthew G. Knepley 24169f6c5813SMatthew G. Knepley Not Collective 24179f6c5813SMatthew G. Knepley 24189f6c5813SMatthew G. Knepley Input Parameter: 241920f4b53cSBarry Smith . label - The `DMLabel` 24209f6c5813SMatthew G. Knepley 24219f6c5813SMatthew G. Knepley Output Parameter: 242220f4b53cSBarry Smith . type - The `DMLabel` type name 24239f6c5813SMatthew G. Knepley 24249f6c5813SMatthew G. Knepley Level: intermediate 24259f6c5813SMatthew G. Knepley 242620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelSetType()`, `DMLabelCreate()` 24279f6c5813SMatthew G. Knepley @*/ 24289f6c5813SMatthew G. Knepley PetscErrorCode DMLabelGetType(DMLabel label, DMLabelType *type) 24299f6c5813SMatthew G. Knepley { 24309f6c5813SMatthew G. Knepley PetscFunctionBegin; 24319f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 24324f572ea9SToby Isaac PetscAssertPointer(type, 2); 24339f6c5813SMatthew G. Knepley PetscCall(DMLabelRegisterAll()); 24349f6c5813SMatthew G. Knepley *type = ((PetscObject)label)->type_name; 24353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24369f6c5813SMatthew G. Knepley } 24379f6c5813SMatthew G. Knepley 24389f6c5813SMatthew G. Knepley static PetscErrorCode DMLabelInitialize_Concrete(DMLabel label) 24399f6c5813SMatthew G. Knepley { 24409f6c5813SMatthew G. Knepley PetscFunctionBegin; 24419f6c5813SMatthew G. Knepley label->ops->view = DMLabelView_Concrete; 24429f6c5813SMatthew G. Knepley label->ops->setup = NULL; 24439f6c5813SMatthew G. Knepley label->ops->duplicate = DMLabelDuplicate_Concrete; 24449f6c5813SMatthew G. Knepley label->ops->getstratumis = DMLabelGetStratumIS_Concrete; 24453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24469f6c5813SMatthew G. Knepley } 24479f6c5813SMatthew G. Knepley 24489f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Concrete(DMLabel label) 24499f6c5813SMatthew G. Knepley { 24509f6c5813SMatthew G. Knepley PetscFunctionBegin; 24519f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 24529f6c5813SMatthew G. Knepley PetscCall(DMLabelInitialize_Concrete(label)); 24533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24549f6c5813SMatthew G. Knepley } 24559f6c5813SMatthew G. Knepley 245684f0b6dfSMatthew G. Knepley /*@ 2457c58f1c22SToby Isaac PetscSectionCreateGlobalSectionLabel - Create a section describing the global field layout using 245820f4b53cSBarry Smith the local section and an `PetscSF` describing the section point overlap. 2459c58f1c22SToby Isaac 246020f4b53cSBarry Smith Collective 24615b5e7992SMatthew G. Knepley 2462c58f1c22SToby Isaac Input Parameters: 246320f4b53cSBarry Smith + s - The `PetscSection` for the local field layout 246420f4b53cSBarry Smith . sf - The `PetscSF` describing parallel layout of the section points 246520f4b53cSBarry Smith . includeConstraints - By default this is `PETSC_FALSE`, meaning that the global field vector will not possess constrained dofs 2466c58f1c22SToby Isaac . label - The label specifying the points 2467c58f1c22SToby Isaac - labelValue - The label stratum specifying the points 2468c58f1c22SToby Isaac 2469c58f1c22SToby Isaac Output Parameter: 247020f4b53cSBarry Smith . gsection - The `PetscSection` for the global field layout 2471c58f1c22SToby Isaac 2472c58f1c22SToby Isaac Level: developer 2473c58f1c22SToby Isaac 247420f4b53cSBarry Smith Note: 247520f4b53cSBarry Smith This gives negative sizes and offsets to points not owned by this process 247620f4b53cSBarry Smith 247720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionCreate()` 2478c58f1c22SToby Isaac @*/ 2479d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionCreateGlobalSectionLabel(PetscSection s, PetscSF sf, PetscBool includeConstraints, DMLabel label, PetscInt labelValue, PetscSection *gsection) 2480d71ae5a4SJacob Faibussowitsch { 2481c58f1c22SToby Isaac PetscInt *neg = NULL, *tmpOff = NULL; 2482c58f1c22SToby Isaac PetscInt pStart, pEnd, p, dof, cdof, off, globalOff = 0, nroots; 2483c58f1c22SToby Isaac 2484c58f1c22SToby Isaac PetscFunctionBegin; 2485d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(s, PETSC_SECTION_CLASSID, 1); 2486d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 2487d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 4); 24889566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(PetscObjectComm((PetscObject)s), gsection)); 24899566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(s, &pStart, &pEnd)); 24909566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(*gsection, pStart, pEnd)); 24919566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, NULL, NULL, NULL)); 2492c58f1c22SToby Isaac if (nroots >= 0) { 249363a3b9bcSJacob Faibussowitsch PetscCheck(nroots >= pEnd - pStart, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "PetscSF nroots %" PetscInt_FMT " < %" PetscInt_FMT " section size", nroots, pEnd - pStart); 24949566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &neg)); 2495c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 24969566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &tmpOff)); 2497c58f1c22SToby Isaac } else { 2498c58f1c22SToby Isaac tmpOff = &(*gsection)->atlasDof[-pStart]; 2499c58f1c22SToby Isaac } 2500c58f1c22SToby Isaac } 2501c58f1c22SToby Isaac /* Mark ghost points with negative dof */ 2502c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) { 2503c58f1c22SToby Isaac PetscInt value; 2504c58f1c22SToby Isaac 25059566063dSJacob Faibussowitsch PetscCall(DMLabelGetValue(label, p, &value)); 2506c58f1c22SToby Isaac if (value != labelValue) continue; 25079566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(s, p, &dof)); 25089566063dSJacob Faibussowitsch PetscCall(PetscSectionSetDof(*gsection, p, dof)); 25099566063dSJacob Faibussowitsch PetscCall(PetscSectionGetConstraintDof(s, p, &cdof)); 25109566063dSJacob Faibussowitsch if (!includeConstraints && cdof > 0) PetscCall(PetscSectionSetConstraintDof(*gsection, p, cdof)); 2511c58f1c22SToby Isaac if (neg) neg[p] = -(dof + 1); 2512c58f1c22SToby Isaac } 25139566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUpBC(*gsection)); 2514c58f1c22SToby Isaac if (nroots >= 0) { 25159566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 25169566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 2517c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 25189371c9d4SSatish Balay for (p = pStart; p < pEnd; ++p) { 25199371c9d4SSatish Balay if (tmpOff[p] < 0) (*gsection)->atlasDof[p - pStart] = tmpOff[p]; 25209371c9d4SSatish Balay } 2521c58f1c22SToby Isaac } 2522c58f1c22SToby Isaac } 252335cb6cd3SPierre Jolivet /* Calculate new sizes, get process offset, and calculate point offsets */ 2524c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd - pStart; ++p) { 2525c58f1c22SToby Isaac cdof = (!includeConstraints && s->bc) ? s->bc->atlasDof[p] : 0; 2526c58f1c22SToby Isaac (*gsection)->atlasOff[p] = off; 2527c58f1c22SToby Isaac off += (*gsection)->atlasDof[p] > 0 ? (*gsection)->atlasDof[p] - cdof : 0; 2528c58f1c22SToby Isaac } 25299566063dSJacob Faibussowitsch PetscCallMPI(MPI_Scan(&off, &globalOff, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject)s))); 2530c58f1c22SToby Isaac globalOff -= off; 2531c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd - pStart; ++p) { 2532c58f1c22SToby Isaac (*gsection)->atlasOff[p] += globalOff; 2533c58f1c22SToby Isaac if (neg) neg[p] = -((*gsection)->atlasOff[p] + 1); 2534c58f1c22SToby Isaac } 2535c58f1c22SToby Isaac /* Put in negative offsets for ghost points */ 2536c58f1c22SToby Isaac if (nroots >= 0) { 25379566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 25389566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 2539c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 25409371c9d4SSatish Balay for (p = pStart; p < pEnd; ++p) { 25419371c9d4SSatish Balay if (tmpOff[p] < 0) (*gsection)->atlasOff[p - pStart] = tmpOff[p]; 25429371c9d4SSatish Balay } 2543c58f1c22SToby Isaac } 2544c58f1c22SToby Isaac } 25459566063dSJacob Faibussowitsch if (nroots >= 0 && nroots > pEnd - pStart) PetscCall(PetscFree(tmpOff)); 25469566063dSJacob Faibussowitsch PetscCall(PetscFree(neg)); 25473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2548c58f1c22SToby Isaac } 2549c58f1c22SToby Isaac 25509371c9d4SSatish Balay typedef struct _n_PetscSectionSym_Label { 25515fdea053SToby Isaac DMLabel label; 25525fdea053SToby Isaac PetscCopyMode *modes; 25535fdea053SToby Isaac PetscInt *sizes; 25545fdea053SToby Isaac const PetscInt ***perms; 25555fdea053SToby Isaac const PetscScalar ***rots; 25565fdea053SToby Isaac PetscInt (*minMaxOrients)[2]; 25575fdea053SToby Isaac PetscInt numStrata; /* numStrata is only increasing, functions as a state */ 25585fdea053SToby Isaac } PetscSectionSym_Label; 25595fdea053SToby Isaac 2560d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymLabelReset(PetscSectionSym sym) 2561d71ae5a4SJacob Faibussowitsch { 25625fdea053SToby Isaac PetscInt i, j; 25635fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 25645fdea053SToby Isaac 25655fdea053SToby Isaac PetscFunctionBegin; 25665fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 25675fdea053SToby Isaac if (sl->modes[i] == PETSC_OWN_POINTER || sl->modes[i] == PETSC_COPY_VALUES) { 25685fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 25699566063dSJacob Faibussowitsch if (sl->perms[i]) PetscCall(PetscFree(sl->perms[i][j])); 25709566063dSJacob Faibussowitsch if (sl->rots[i]) PetscCall(PetscFree(sl->rots[i][j])); 25715fdea053SToby Isaac } 25725fdea053SToby Isaac if (sl->perms[i]) { 25735fdea053SToby Isaac const PetscInt **perms = &sl->perms[i][sl->minMaxOrients[i][0]]; 25745fdea053SToby Isaac 25759566063dSJacob Faibussowitsch PetscCall(PetscFree(perms)); 25765fdea053SToby Isaac } 25775fdea053SToby Isaac if (sl->rots[i]) { 25785fdea053SToby Isaac const PetscScalar **rots = &sl->rots[i][sl->minMaxOrients[i][0]]; 25795fdea053SToby Isaac 25809566063dSJacob Faibussowitsch PetscCall(PetscFree(rots)); 25815fdea053SToby Isaac } 25825fdea053SToby Isaac } 25835fdea053SToby Isaac } 25849566063dSJacob Faibussowitsch PetscCall(PetscFree5(sl->modes, sl->sizes, sl->perms, sl->rots, sl->minMaxOrients)); 25859566063dSJacob Faibussowitsch PetscCall(DMLabelDestroy(&sl->label)); 25865fdea053SToby Isaac sl->numStrata = 0; 25873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 25885fdea053SToby Isaac } 25895fdea053SToby Isaac 2590d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymDestroy_Label(PetscSectionSym sym) 2591d71ae5a4SJacob Faibussowitsch { 25925fdea053SToby Isaac PetscFunctionBegin; 25939566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelReset(sym)); 25949566063dSJacob Faibussowitsch PetscCall(PetscFree(sym->data)); 25953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 25965fdea053SToby Isaac } 25975fdea053SToby Isaac 2598d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymView_Label(PetscSectionSym sym, PetscViewer viewer) 2599d71ae5a4SJacob Faibussowitsch { 26005fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 26015fdea053SToby Isaac PetscBool isAscii; 26025fdea053SToby Isaac DMLabel label = sl->label; 2603d67d17b1SMatthew G. Knepley const char *name; 26045fdea053SToby Isaac 26055fdea053SToby Isaac PetscFunctionBegin; 26069566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isAscii)); 26075fdea053SToby Isaac if (isAscii) { 26085fdea053SToby Isaac PetscInt i, j, k; 26095fdea053SToby Isaac PetscViewerFormat format; 26105fdea053SToby Isaac 26119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 26125fdea053SToby Isaac if (label) { 26139566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 26145fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 26159566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 26169566063dSJacob Faibussowitsch PetscCall(DMLabelView(label, viewer)); 26179566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26185fdea053SToby Isaac } else { 26199566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 26209566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Label '%s'\n", name)); 26215fdea053SToby Isaac } 26225fdea053SToby Isaac } else { 26239566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "No label given\n")); 26245fdea053SToby Isaac } 26259566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 26265fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 26275fdea053SToby Isaac PetscInt value = i < sl->numStrata ? label->stratumValues[i] : label->defaultValue; 26285fdea053SToby Isaac 26295fdea053SToby Isaac if (!(sl->perms[i] || sl->rots[i])) { 263063a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %" PetscInt_FMT " (%" PetscInt_FMT " dofs per point): no symmetries\n", value, sl->sizes[i])); 26315fdea053SToby Isaac } else { 263263a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %" PetscInt_FMT " (%" PetscInt_FMT " dofs per point):\n", value, sl->sizes[i])); 26339566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 263463a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation range: [%" PetscInt_FMT ", %" PetscInt_FMT ")\n", sl->minMaxOrients[i][0], sl->minMaxOrients[i][1])); 26355fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 26369566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 26375fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 26385fdea053SToby Isaac if (!((sl->perms[i] && sl->perms[i][j]) || (sl->rots[i] && sl->rots[i][j]))) { 263963a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation %" PetscInt_FMT ": identity\n", j)); 26405fdea053SToby Isaac } else { 26415fdea053SToby Isaac PetscInt tab; 26425fdea053SToby Isaac 264363a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation %" PetscInt_FMT ":\n", j)); 26449566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 26459566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIGetTab(viewer, &tab)); 26465fdea053SToby Isaac if (sl->perms[i] && sl->perms[i][j]) { 26479566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Permutation:")); 26489566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, 0)); 264963a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %" PetscInt_FMT, sl->perms[i][j][k])); 26509566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "\n")); 26519566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, tab)); 26525fdea053SToby Isaac } 26535fdea053SToby Isaac if (sl->rots[i] && sl->rots[i][j]) { 26549566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Rotations: ")); 26559566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, 0)); 26565fdea053SToby Isaac #if defined(PETSC_USE_COMPLEX) 265763a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %+g+i*%+g", (double)PetscRealPart(sl->rots[i][j][k]), (double)PetscImaginaryPart(sl->rots[i][j][k]))); 26585fdea053SToby Isaac #else 265963a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %+g", (double)sl->rots[i][j][k])); 26605fdea053SToby Isaac #endif 26619566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "\n")); 26629566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, tab)); 26635fdea053SToby Isaac } 26649566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26655fdea053SToby Isaac } 26665fdea053SToby Isaac } 26679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26685fdea053SToby Isaac } 26699566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26705fdea053SToby Isaac } 26715fdea053SToby Isaac } 26729566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26735fdea053SToby Isaac } 26743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26755fdea053SToby Isaac } 26765fdea053SToby Isaac 26775fdea053SToby Isaac /*@ 26785fdea053SToby Isaac PetscSectionSymLabelSetLabel - set the label whose strata will define the points that receive symmetries 26795fdea053SToby Isaac 268020f4b53cSBarry Smith Logically 26815fdea053SToby Isaac 268260225df5SJacob Faibussowitsch Input Parameters: 26835fdea053SToby Isaac + sym - the section symmetries 268420f4b53cSBarry Smith - label - the `DMLabel` describing the types of points 26855fdea053SToby Isaac 26865fdea053SToby Isaac Level: developer: 26875fdea053SToby Isaac 268820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelSetStratum()`, `PetscSectionSymCreateLabel()`, `PetscSectionGetPointSyms()` 26895fdea053SToby Isaac @*/ 2690d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelSetLabel(PetscSectionSym sym, DMLabel label) 2691d71ae5a4SJacob Faibussowitsch { 26925fdea053SToby Isaac PetscSectionSym_Label *sl; 26935fdea053SToby Isaac 26945fdea053SToby Isaac PetscFunctionBegin; 26955fdea053SToby Isaac PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 26965fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 26979566063dSJacob Faibussowitsch if (sl->label && sl->label != label) PetscCall(PetscSectionSymLabelReset(sym)); 26985fdea053SToby Isaac if (label) { 26995fdea053SToby Isaac sl->label = label; 27009566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)label)); 27019566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(label, &sl->numStrata)); 27029566063dSJacob Faibussowitsch PetscCall(PetscMalloc5(sl->numStrata + 1, &sl->modes, sl->numStrata + 1, &sl->sizes, sl->numStrata + 1, &sl->perms, sl->numStrata + 1, &sl->rots, sl->numStrata + 1, &sl->minMaxOrients)); 27039566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->modes, (sl->numStrata + 1) * sizeof(PetscCopyMode))); 27049566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->sizes, (sl->numStrata + 1) * sizeof(PetscInt))); 27059566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->perms, (sl->numStrata + 1) * sizeof(const PetscInt **))); 27069566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->rots, (sl->numStrata + 1) * sizeof(const PetscScalar **))); 27079566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->minMaxOrients, (sl->numStrata + 1) * sizeof(PetscInt[2]))); 27085fdea053SToby Isaac } 27093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 27105fdea053SToby Isaac } 27115fdea053SToby Isaac 27125fdea053SToby Isaac /*@C 2713b004864fSMatthew G. Knepley PetscSectionSymLabelGetStratum - get the symmetries for the orientations of a stratum 2714b004864fSMatthew G. Knepley 271520f4b53cSBarry Smith Logically Collective 2716b004864fSMatthew G. Knepley 2717b004864fSMatthew G. Knepley Input Parameters: 2718b004864fSMatthew G. Knepley + sym - the section symmetries 2719b004864fSMatthew G. Knepley - stratum - the stratum value in the label that we are assigning symmetries for 2720b004864fSMatthew G. Knepley 2721b004864fSMatthew G. Knepley Output Parameters: 272220f4b53cSBarry Smith + size - the number of dofs for points in the `stratum` of the label 272320f4b53cSBarry Smith . minOrient - the smallest orientation for a point in this `stratum` 272420f4b53cSBarry Smith . maxOrient - one greater than the largest orientation for a ppoint in this `stratum` (i.e., orientations are in the range [`minOrient`, `maxOrient`)) 272520f4b53cSBarry Smith . perms - `NULL` if there are no permutations, or (`maxOrient` - `minOrient`) permutations, one for each orientation. A `NULL` permutation is the identity 272620f4b53cSBarry Smith - rots - `NULL` if there are no rotations, or (`maxOrient` - `minOrient`) sets of rotations, one for each orientation. A `NULL` set of orientations is the identity 2727b004864fSMatthew G. Knepley 2728b004864fSMatthew G. Knepley Level: developer 2729b004864fSMatthew G. Knepley 273020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelSetStratum()`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetPointSyms()`, `PetscSectionSymCreateLabel()` 2731b004864fSMatthew G. Knepley @*/ 2732d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelGetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt *size, PetscInt *minOrient, PetscInt *maxOrient, const PetscInt ***perms, const PetscScalar ***rots) 2733d71ae5a4SJacob Faibussowitsch { 2734b004864fSMatthew G. Knepley PetscSectionSym_Label *sl; 2735b004864fSMatthew G. Knepley const char *name; 2736b004864fSMatthew G. Knepley PetscInt i; 2737b004864fSMatthew G. Knepley 2738b004864fSMatthew G. Knepley PetscFunctionBegin; 2739b004864fSMatthew G. Knepley PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 2740b004864fSMatthew G. Knepley sl = (PetscSectionSym_Label *)sym->data; 2741b004864fSMatthew G. Knepley PetscCheck(sl->label, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_WRONGSTATE, "No label set yet"); 2742b004864fSMatthew G. Knepley for (i = 0; i <= sl->numStrata; i++) { 2743b004864fSMatthew G. Knepley PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 2744b004864fSMatthew G. Knepley 2745b004864fSMatthew G. Knepley if (stratum == value) break; 2746b004864fSMatthew G. Knepley } 27479566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 2748b004864fSMatthew G. Knepley PetscCheck(i <= sl->numStrata, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_OUTOFRANGE, "Stratum %" PetscInt_FMT " not found in label %s", stratum, name); 27499371c9d4SSatish Balay if (size) { 27504f572ea9SToby Isaac PetscAssertPointer(size, 3); 27519371c9d4SSatish Balay *size = sl->sizes[i]; 27529371c9d4SSatish Balay } 27539371c9d4SSatish Balay if (minOrient) { 27544f572ea9SToby Isaac PetscAssertPointer(minOrient, 4); 27559371c9d4SSatish Balay *minOrient = sl->minMaxOrients[i][0]; 27569371c9d4SSatish Balay } 27579371c9d4SSatish Balay if (maxOrient) { 27584f572ea9SToby Isaac PetscAssertPointer(maxOrient, 5); 27599371c9d4SSatish Balay *maxOrient = sl->minMaxOrients[i][1]; 27609371c9d4SSatish Balay } 27619371c9d4SSatish Balay if (perms) { 27624f572ea9SToby Isaac PetscAssertPointer(perms, 6); 27638e3a54c0SPierre Jolivet *perms = PetscSafePointerPlusOffset(sl->perms[i], sl->minMaxOrients[i][0]); 27649371c9d4SSatish Balay } 27659371c9d4SSatish Balay if (rots) { 27664f572ea9SToby Isaac PetscAssertPointer(rots, 7); 27678e3a54c0SPierre Jolivet *rots = PetscSafePointerPlusOffset(sl->rots[i], sl->minMaxOrients[i][0]); 27689371c9d4SSatish Balay } 27693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2770b004864fSMatthew G. Knepley } 2771b004864fSMatthew G. Knepley 2772b004864fSMatthew G. Knepley /*@C 27735fdea053SToby Isaac PetscSectionSymLabelSetStratum - set the symmetries for the orientations of a stratum 27745fdea053SToby Isaac 277520f4b53cSBarry Smith Logically 27765fdea053SToby Isaac 27775fdea053SToby Isaac Input Parameters: 27785b5e7992SMatthew G. Knepley + sym - the section symmetries 27795fdea053SToby Isaac . stratum - the stratum value in the label that we are assigning symmetries for 278020f4b53cSBarry Smith . size - the number of dofs for points in the `stratum` of the label 278120f4b53cSBarry Smith . minOrient - the smallest orientation for a point in this `stratum` 278220f4b53cSBarry Smith . maxOrient - one greater than the largest orientation for a point in this `stratum` (i.e., orientations are in the range [`minOrient`, `maxOrient`)) 278320f4b53cSBarry Smith . mode - how `sym` should copy the `perms` and `rots` arrays 278420f4b53cSBarry Smith . perms - `NULL` if there are no permutations, or (`maxOrient` - `minOrient`) permutations, one for each orientation. A `NULL` permutation is the identity 278520f4b53cSBarry Smith - rots - `NULL` if there are no rotations, or (`maxOrient` - `minOrient`) sets of rotations, one for each orientation. A `NULL` set of orientations is the identity 27865fdea053SToby Isaac 27875fdea053SToby Isaac Level: developer 27885fdea053SToby Isaac 278920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelGetStratum()`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetPointSyms()`, `PetscSectionSymCreateLabel()` 27905fdea053SToby Isaac @*/ 2791d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelSetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt size, PetscInt minOrient, PetscInt maxOrient, PetscCopyMode mode, const PetscInt **perms, const PetscScalar **rots) 2792d71ae5a4SJacob Faibussowitsch { 27935fdea053SToby Isaac PetscSectionSym_Label *sl; 2794d67d17b1SMatthew G. Knepley const char *name; 2795d67d17b1SMatthew G. Knepley PetscInt i, j, k; 27965fdea053SToby Isaac 27975fdea053SToby Isaac PetscFunctionBegin; 27985fdea053SToby Isaac PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 27995fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 2800b004864fSMatthew G. Knepley PetscCheck(sl->label, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_WRONGSTATE, "No label set yet"); 28015fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 28025fdea053SToby Isaac PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 28035fdea053SToby Isaac 28045fdea053SToby Isaac if (stratum == value) break; 28055fdea053SToby Isaac } 28069566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 280763a3b9bcSJacob Faibussowitsch PetscCheck(i <= sl->numStrata, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_OUTOFRANGE, "Stratum %" PetscInt_FMT " not found in label %s", stratum, name); 28085fdea053SToby Isaac sl->sizes[i] = size; 28095fdea053SToby Isaac sl->modes[i] = mode; 28105fdea053SToby Isaac sl->minMaxOrients[i][0] = minOrient; 28115fdea053SToby Isaac sl->minMaxOrients[i][1] = maxOrient; 28125fdea053SToby Isaac if (mode == PETSC_COPY_VALUES) { 28135fdea053SToby Isaac if (perms) { 28145fdea053SToby Isaac PetscInt **ownPerms; 28155fdea053SToby Isaac 28169566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(maxOrient - minOrient, &ownPerms)); 28175fdea053SToby Isaac for (j = 0; j < maxOrient - minOrient; j++) { 28185fdea053SToby Isaac if (perms[j]) { 28199566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &ownPerms[j])); 2820ad540459SPierre Jolivet for (k = 0; k < size; k++) ownPerms[j][k] = perms[j][k]; 28215fdea053SToby Isaac } 28225fdea053SToby Isaac } 28235fdea053SToby Isaac sl->perms[i] = (const PetscInt **)&ownPerms[-minOrient]; 28245fdea053SToby Isaac } 28255fdea053SToby Isaac if (rots) { 28265fdea053SToby Isaac PetscScalar **ownRots; 28275fdea053SToby Isaac 28289566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(maxOrient - minOrient, &ownRots)); 28295fdea053SToby Isaac for (j = 0; j < maxOrient - minOrient; j++) { 28305fdea053SToby Isaac if (rots[j]) { 28319566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &ownRots[j])); 2832ad540459SPierre Jolivet for (k = 0; k < size; k++) ownRots[j][k] = rots[j][k]; 28335fdea053SToby Isaac } 28345fdea053SToby Isaac } 28355fdea053SToby Isaac sl->rots[i] = (const PetscScalar **)&ownRots[-minOrient]; 28365fdea053SToby Isaac } 28375fdea053SToby Isaac } else { 28388e3a54c0SPierre Jolivet sl->perms[i] = PetscSafePointerPlusOffset(perms, -minOrient); 28398e3a54c0SPierre Jolivet sl->rots[i] = PetscSafePointerPlusOffset(rots, -minOrient); 28405fdea053SToby Isaac } 28413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28425fdea053SToby Isaac } 28435fdea053SToby Isaac 2844d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymGetPoints_Label(PetscSectionSym sym, PetscSection section, PetscInt numPoints, const PetscInt *points, const PetscInt **perms, const PetscScalar **rots) 2845d71ae5a4SJacob Faibussowitsch { 28465fdea053SToby Isaac PetscInt i, j, numStrata; 28475fdea053SToby Isaac PetscSectionSym_Label *sl; 28485fdea053SToby Isaac DMLabel label; 28495fdea053SToby Isaac 28505fdea053SToby Isaac PetscFunctionBegin; 28515fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 28525fdea053SToby Isaac numStrata = sl->numStrata; 28535fdea053SToby Isaac label = sl->label; 28545fdea053SToby Isaac for (i = 0; i < numPoints; i++) { 28555fdea053SToby Isaac PetscInt point = points[2 * i]; 28565fdea053SToby Isaac PetscInt ornt = points[2 * i + 1]; 28575fdea053SToby Isaac 28585fdea053SToby Isaac for (j = 0; j < numStrata; j++) { 28595fdea053SToby Isaac if (label->validIS[j]) { 28605fdea053SToby Isaac PetscInt k; 28615fdea053SToby Isaac 28622b4d18a0SMatthew G. Knepley PetscCall(ISLocate(label->points[j], point, &k)); 28635fdea053SToby Isaac if (k >= 0) break; 28645fdea053SToby Isaac } else { 28655fdea053SToby Isaac PetscBool has; 28665fdea053SToby Isaac 28679566063dSJacob Faibussowitsch PetscCall(PetscHSetIHas(label->ht[j], point, &has)); 28685fdea053SToby Isaac if (has) break; 28695fdea053SToby Isaac } 28705fdea053SToby Isaac } 28719371c9d4SSatish Balay PetscCheck(!(sl->minMaxOrients[j][1] > sl->minMaxOrients[j][0]) || !(ornt < sl->minMaxOrients[j][0] || ornt >= sl->minMaxOrients[j][1]), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "point %" PetscInt_FMT " orientation %" PetscInt_FMT " not in range [%" PetscInt_FMT ", %" PetscInt_FMT ") for stratum %" PetscInt_FMT, point, ornt, sl->minMaxOrients[j][0], sl->minMaxOrients[j][1], 28729371c9d4SSatish Balay j < numStrata ? label->stratumValues[j] : label->defaultValue); 2873ad540459SPierre Jolivet if (perms) perms[i] = sl->perms[j] ? sl->perms[j][ornt] : NULL; 2874ad540459SPierre Jolivet if (rots) rots[i] = sl->rots[j] ? sl->rots[j][ornt] : NULL; 28755fdea053SToby Isaac } 28763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28775fdea053SToby Isaac } 28785fdea053SToby Isaac 2879d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymCopy_Label(PetscSectionSym sym, PetscSectionSym nsym) 2880d71ae5a4SJacob Faibussowitsch { 2881b004864fSMatthew G. Knepley PetscSectionSym_Label *sl = (PetscSectionSym_Label *)nsym->data; 2882b004864fSMatthew G. Knepley IS valIS; 2883b004864fSMatthew G. Knepley const PetscInt *values; 2884b004864fSMatthew G. Knepley PetscInt Nv, v; 2885b004864fSMatthew G. Knepley 2886b004864fSMatthew G. Knepley PetscFunctionBegin; 28879566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(sl->label, &Nv)); 28889566063dSJacob Faibussowitsch PetscCall(DMLabelGetValueIS(sl->label, &valIS)); 28899566063dSJacob Faibussowitsch PetscCall(ISGetIndices(valIS, &values)); 2890b004864fSMatthew G. Knepley for (v = 0; v < Nv; ++v) { 2891b004864fSMatthew G. Knepley const PetscInt val = values[v]; 2892b004864fSMatthew G. Knepley PetscInt size, minOrient, maxOrient; 2893b004864fSMatthew G. Knepley const PetscInt **perms; 2894b004864fSMatthew G. Knepley const PetscScalar **rots; 2895b004864fSMatthew G. Knepley 28969566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelGetStratum(sym, val, &size, &minOrient, &maxOrient, &perms, &rots)); 28979566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelSetStratum(nsym, val, size, minOrient, maxOrient, PETSC_COPY_VALUES, perms, rots)); 2898b004864fSMatthew G. Knepley } 28999566063dSJacob Faibussowitsch PetscCall(ISDestroy(&valIS)); 29003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2901b004864fSMatthew G. Knepley } 2902b004864fSMatthew G. Knepley 2903d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymDistribute_Label(PetscSectionSym sym, PetscSF migrationSF, PetscSectionSym *dsym) 2904d71ae5a4SJacob Faibussowitsch { 2905b004864fSMatthew G. Knepley PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 2906b004864fSMatthew G. Knepley DMLabel dlabel; 2907b004864fSMatthew G. Knepley 2908b004864fSMatthew G. Knepley PetscFunctionBegin; 29099566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute(sl->label, migrationSF, &dlabel)); 29109566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCreateLabel(PetscObjectComm((PetscObject)sym), dlabel, dsym)); 29119566063dSJacob Faibussowitsch PetscCall(DMLabelDestroy(&dlabel)); 29129566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCopy(sym, *dsym)); 29133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2914b004864fSMatthew G. Knepley } 2915b004864fSMatthew G. Knepley 2916d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymCreate_Label(PetscSectionSym sym) 2917d71ae5a4SJacob Faibussowitsch { 29185fdea053SToby Isaac PetscSectionSym_Label *sl; 29195fdea053SToby Isaac 29205fdea053SToby Isaac PetscFunctionBegin; 29214dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&sl)); 29225fdea053SToby Isaac sym->ops->getpoints = PetscSectionSymGetPoints_Label; 2923b004864fSMatthew G. Knepley sym->ops->distribute = PetscSectionSymDistribute_Label; 2924b004864fSMatthew G. Knepley sym->ops->copy = PetscSectionSymCopy_Label; 29255fdea053SToby Isaac sym->ops->view = PetscSectionSymView_Label; 29265fdea053SToby Isaac sym->ops->destroy = PetscSectionSymDestroy_Label; 29275fdea053SToby Isaac sym->data = (void *)sl; 29283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 29295fdea053SToby Isaac } 29305fdea053SToby Isaac 29315fdea053SToby Isaac /*@ 29325fdea053SToby Isaac PetscSectionSymCreateLabel - Create a section symmetry that assigns one symmetry to each stratum of a label 29335fdea053SToby Isaac 29345fdea053SToby Isaac Collective 29355fdea053SToby Isaac 29365fdea053SToby Isaac Input Parameters: 29375fdea053SToby Isaac + comm - the MPI communicator for the new symmetry 29385fdea053SToby Isaac - label - the label defining the strata 29395fdea053SToby Isaac 29402fe279fdSBarry Smith Output Parameter: 29415fdea053SToby Isaac . sym - the section symmetries 29425fdea053SToby Isaac 29435fdea053SToby Isaac Level: developer 29445fdea053SToby Isaac 294520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetSym()`, `PetscSectionSymLabelSetStratum()`, `PetscSectionGetPointSyms()` 29465fdea053SToby Isaac @*/ 2947d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymCreateLabel(MPI_Comm comm, DMLabel label, PetscSectionSym *sym) 2948d71ae5a4SJacob Faibussowitsch { 29495fdea053SToby Isaac PetscFunctionBegin; 29509566063dSJacob Faibussowitsch PetscCall(DMInitializePackage()); 29519566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCreate(comm, sym)); 29529566063dSJacob Faibussowitsch PetscCall(PetscSectionSymSetType(*sym, PETSCSECTIONSYMLABEL)); 29539566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelSetLabel(*sym, label)); 29543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 29555fdea053SToby Isaac } 2956