15fdea053SToby Isaac #include <petscdm.h> 2c58f1c22SToby Isaac #include <petsc/private/dmlabelimpl.h> /*I "petscdmlabel.h" I*/ 3c58f1c22SToby Isaac #include <petsc/private/isimpl.h> /*I "petscis.h" I*/ 4c58f1c22SToby Isaac #include <petscsf.h> 5c58f1c22SToby Isaac 6c58f1c22SToby Isaac /*@C 7c58f1c22SToby Isaac DMLabelCreate - Create a DMLabel object, which is a multimap 8c58f1c22SToby Isaac 9c58f1c22SToby Isaac Input parameter: 10c58f1c22SToby Isaac . name - The label name 11c58f1c22SToby Isaac 12c58f1c22SToby Isaac Output parameter: 13c58f1c22SToby Isaac . label - The DMLabel 14c58f1c22SToby Isaac 15c58f1c22SToby Isaac Level: beginner 16c58f1c22SToby Isaac 17c58f1c22SToby Isaac .seealso: DMLabelDestroy() 18c58f1c22SToby Isaac @*/ 19c58f1c22SToby Isaac PetscErrorCode DMLabelCreate(const char name[], DMLabel *label) 20c58f1c22SToby Isaac { 21c58f1c22SToby Isaac PetscErrorCode ierr; 22c58f1c22SToby Isaac 23c58f1c22SToby Isaac PetscFunctionBegin; 24c58f1c22SToby Isaac ierr = PetscNew(label);CHKERRQ(ierr); 25c58f1c22SToby Isaac ierr = PetscStrallocpy(name, &(*label)->name);CHKERRQ(ierr); 26c58f1c22SToby Isaac 27c58f1c22SToby Isaac (*label)->refct = 1; 28c58f1c22SToby Isaac (*label)->state = -1; 29c58f1c22SToby Isaac (*label)->numStrata = 0; 305aa44df4SToby Isaac (*label)->defaultValue = -1; 31c58f1c22SToby Isaac (*label)->stratumValues = NULL; 32ad8374ffSToby Isaac (*label)->validIS = NULL; 33c58f1c22SToby Isaac (*label)->stratumSizes = NULL; 34c58f1c22SToby Isaac (*label)->points = NULL; 35c58f1c22SToby Isaac (*label)->ht = NULL; 36c58f1c22SToby Isaac (*label)->pStart = -1; 37c58f1c22SToby Isaac (*label)->pEnd = -1; 38c58f1c22SToby Isaac (*label)->bt = NULL; 39c58f1c22SToby Isaac PetscFunctionReturn(0); 40c58f1c22SToby Isaac } 41c58f1c22SToby Isaac 42c58f1c22SToby Isaac /* 43c58f1c22SToby Isaac DMLabelMakeValid_Private - Transfer stratum data from the hash format to the sorted list format 44c58f1c22SToby Isaac 45c58f1c22SToby Isaac Input parameter: 46c58f1c22SToby Isaac + label - The DMLabel 47c58f1c22SToby Isaac - v - The stratum value 48c58f1c22SToby Isaac 49c58f1c22SToby Isaac Output parameter: 50c58f1c22SToby Isaac . label - The DMLabel with stratum in sorted list format 51c58f1c22SToby Isaac 52c58f1c22SToby Isaac Level: developer 53c58f1c22SToby Isaac 54c58f1c22SToby Isaac .seealso: DMLabelCreate() 55c58f1c22SToby Isaac */ 56c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeValid_Private(DMLabel label, PetscInt v) 57c58f1c22SToby Isaac { 58c58f1c22SToby Isaac PetscInt off; 59ad8374ffSToby Isaac PetscInt *pointArray; 60c58f1c22SToby Isaac PetscErrorCode ierr; 61c58f1c22SToby Isaac 62ad8374ffSToby Isaac if (label->validIS[v]) return 0; 63c58f1c22SToby Isaac if (v >= label->numStrata) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %D in DMLabelMakeValid_Private\n", v); 64c58f1c22SToby Isaac PetscFunctionBegin; 65c58f1c22SToby Isaac PetscHashISize(label->ht[v], label->stratumSizes[v]); 66c58f1c22SToby Isaac 67ad8374ffSToby Isaac ierr = PetscMalloc1(label->stratumSizes[v], &pointArray);CHKERRQ(ierr); 68c58f1c22SToby Isaac off = 0; 69ad8374ffSToby Isaac ierr = PetscHashIGetKeys(label->ht[v], &off, pointArray);CHKERRQ(ierr); 70c58f1c22SToby Isaac if (off != label->stratumSizes[v]) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Invalid number of contributed points %D from value %D should be %D", off, label->stratumValues[v], label->stratumSizes[v]); 71c58f1c22SToby Isaac PetscHashIClear(label->ht[v]); 72ad8374ffSToby Isaac ierr = PetscSortInt(label->stratumSizes[v], pointArray);CHKERRQ(ierr); 73c58f1c22SToby Isaac if (label->bt) { 74c58f1c22SToby Isaac PetscInt p; 75c58f1c22SToby Isaac 76c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 77ad8374ffSToby Isaac const PetscInt point = pointArray[p]; 78c58f1c22SToby Isaac 79c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 80c58f1c22SToby Isaac ierr = PetscBTSet(label->bt, point - label->pStart);CHKERRQ(ierr); 81c58f1c22SToby Isaac } 82c58f1c22SToby Isaac } 83ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,label->stratumSizes[v],pointArray,PETSC_OWN_POINTER,&(label->points[v]));CHKERRQ(ierr); 84ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject) (label->points[v]), "indices");CHKERRQ(ierr); 85ad8374ffSToby Isaac label->validIS[v] = PETSC_TRUE; 86c58f1c22SToby Isaac ++label->state; 87c58f1c22SToby Isaac PetscFunctionReturn(0); 88c58f1c22SToby Isaac } 89c58f1c22SToby Isaac 90c58f1c22SToby Isaac /* 91c58f1c22SToby Isaac DMLabelMakeAllValid_Private - Transfer all strata from the hash format to the sorted list format 92c58f1c22SToby Isaac 93c58f1c22SToby Isaac Input parameter: 94c58f1c22SToby Isaac . label - The DMLabel 95c58f1c22SToby Isaac 96c58f1c22SToby Isaac Output parameter: 97c58f1c22SToby Isaac . label - The DMLabel with all strata in sorted list format 98c58f1c22SToby Isaac 99c58f1c22SToby Isaac Level: developer 100c58f1c22SToby Isaac 101c58f1c22SToby Isaac .seealso: DMLabelCreate() 102c58f1c22SToby Isaac */ 103c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeAllValid_Private(DMLabel label) 104c58f1c22SToby Isaac { 105c58f1c22SToby Isaac PetscInt v; 106c58f1c22SToby Isaac PetscErrorCode ierr; 107c58f1c22SToby Isaac 108c58f1c22SToby Isaac PetscFunctionBegin; 109c58f1c22SToby Isaac for (v = 0; v < label->numStrata; v++){ 110c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 111c58f1c22SToby Isaac } 112c58f1c22SToby Isaac PetscFunctionReturn(0); 113c58f1c22SToby Isaac } 114c58f1c22SToby Isaac 115c58f1c22SToby Isaac /* 116c58f1c22SToby Isaac DMLabelMakeInvalid_Private - Transfer stratum data from the sorted list format to the hash format 117c58f1c22SToby Isaac 118c58f1c22SToby Isaac Input parameter: 119c58f1c22SToby Isaac + label - The DMLabel 120c58f1c22SToby Isaac - v - The stratum value 121c58f1c22SToby Isaac 122c58f1c22SToby Isaac Output parameter: 123c58f1c22SToby Isaac . label - The DMLabel with stratum in hash format 124c58f1c22SToby Isaac 125c58f1c22SToby Isaac Level: developer 126c58f1c22SToby Isaac 127c58f1c22SToby Isaac .seealso: DMLabelCreate() 128c58f1c22SToby Isaac */ 129c58f1c22SToby Isaac static PetscErrorCode DMLabelMakeInvalid_Private(DMLabel label, PetscInt v) 130c58f1c22SToby Isaac { 131c58f1c22SToby Isaac PETSC_UNUSED PetscHashIIter ret, iter; 132c58f1c22SToby Isaac PetscInt p; 133ad8374ffSToby Isaac const PetscInt *points; 134c58f1c22SToby Isaac PetscErrorCode ierr; 135c58f1c22SToby Isaac 136c58f1c22SToby Isaac PetscFunctionBegin; 137ad8374ffSToby Isaac if (!label->validIS[v]) PetscFunctionReturn(0); 138ad8374ffSToby Isaac if (label->points[v]) { 139ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v],&points);CHKERRQ(ierr); 140ad8374ffSToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) PetscHashIPut(label->ht[v], points[p], ret, iter); 141ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 142ad8374ffSToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 143ad8374ffSToby Isaac } 144ad8374ffSToby Isaac label->validIS[v] = PETSC_FALSE; 145c58f1c22SToby Isaac PetscFunctionReturn(0); 146c58f1c22SToby Isaac } 147c58f1c22SToby Isaac 148c58f1c22SToby Isaac PetscErrorCode DMLabelGetState(DMLabel label, PetscObjectState *state) 149c58f1c22SToby Isaac { 150c58f1c22SToby Isaac PetscFunctionBegin; 151c58f1c22SToby Isaac PetscValidPointer(state, 2); 152c58f1c22SToby Isaac *state = label->state; 153c58f1c22SToby Isaac PetscFunctionReturn(0); 154c58f1c22SToby Isaac } 155c58f1c22SToby Isaac 156c58f1c22SToby Isaac PetscErrorCode DMLabelAddStratum(DMLabel label, PetscInt value) 157c58f1c22SToby Isaac { 158ad8374ffSToby Isaac PetscInt v, *tmpV, *tmpS; 159ad8374ffSToby Isaac IS *tmpP; 160c58f1c22SToby Isaac PetscHashI *tmpH; 161c58f1c22SToby Isaac PetscBool *tmpB; 162c58f1c22SToby Isaac PetscErrorCode ierr; 163c58f1c22SToby Isaac 164c58f1c22SToby Isaac PetscFunctionBegin; 165c58f1c22SToby Isaac 166ad8374ffSToby Isaac for (v = 0; v < label->numStrata; v++) { 167ad8374ffSToby Isaac if (label->stratumValues[v] == value) PetscFunctionReturn(0); 168ad8374ffSToby Isaac } 169c58f1c22SToby Isaac ierr = PetscMalloc1((label->numStrata+1), &tmpV);CHKERRQ(ierr); 170c58f1c22SToby Isaac ierr = PetscMalloc1((label->numStrata+1), &tmpS);CHKERRQ(ierr); 171c58f1c22SToby Isaac ierr = PetscMalloc1((label->numStrata+1), &tmpH);CHKERRQ(ierr); 172c58f1c22SToby Isaac ierr = PetscMalloc1((label->numStrata+1), &tmpP);CHKERRQ(ierr); 173c58f1c22SToby Isaac ierr = PetscMalloc1((label->numStrata+1), &tmpB);CHKERRQ(ierr); 174c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 175c58f1c22SToby Isaac tmpV[v] = label->stratumValues[v]; 176c58f1c22SToby Isaac tmpS[v] = label->stratumSizes[v]; 177c58f1c22SToby Isaac tmpH[v] = label->ht[v]; 178c58f1c22SToby Isaac tmpP[v] = label->points[v]; 179ad8374ffSToby Isaac tmpB[v] = label->validIS[v]; 180c58f1c22SToby Isaac } 181c58f1c22SToby Isaac tmpV[v] = value; 182c58f1c22SToby Isaac tmpS[v] = 0; 183c58f1c22SToby Isaac PetscHashICreate(tmpH[v]); 184ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,0,NULL,PETSC_OWN_POINTER,&tmpP[v]);CHKERRQ(ierr); 185c58f1c22SToby Isaac tmpB[v] = PETSC_TRUE; 186c58f1c22SToby Isaac ++label->numStrata; 187c58f1c22SToby Isaac ierr = PetscFree(label->stratumValues);CHKERRQ(ierr); 188c58f1c22SToby Isaac ierr = PetscFree(label->stratumSizes);CHKERRQ(ierr); 189c58f1c22SToby Isaac ierr = PetscFree(label->ht);CHKERRQ(ierr); 190c58f1c22SToby Isaac ierr = PetscFree(label->points);CHKERRQ(ierr); 191ad8374ffSToby Isaac ierr = PetscFree(label->validIS);CHKERRQ(ierr); 192c58f1c22SToby Isaac label->stratumValues = tmpV; 193c58f1c22SToby Isaac label->stratumSizes = tmpS; 194c58f1c22SToby Isaac label->ht = tmpH; 195c58f1c22SToby Isaac label->points = tmpP; 196ad8374ffSToby Isaac label->validIS = tmpB; 197c58f1c22SToby Isaac 198c58f1c22SToby Isaac PetscFunctionReturn(0); 199c58f1c22SToby Isaac } 200c58f1c22SToby Isaac 201c58f1c22SToby Isaac /*@C 202c58f1c22SToby Isaac DMLabelGetName - Return the name of a DMLabel object 203c58f1c22SToby Isaac 204c58f1c22SToby Isaac Input parameter: 205c58f1c22SToby Isaac . label - The DMLabel 206c58f1c22SToby Isaac 207c58f1c22SToby Isaac Output parameter: 208c58f1c22SToby Isaac . name - The label name 209c58f1c22SToby Isaac 210c58f1c22SToby Isaac Level: beginner 211c58f1c22SToby Isaac 212c58f1c22SToby Isaac .seealso: DMLabelCreate() 213c58f1c22SToby Isaac @*/ 214c58f1c22SToby Isaac PetscErrorCode DMLabelGetName(DMLabel label, const char **name) 215c58f1c22SToby Isaac { 216c58f1c22SToby Isaac PetscFunctionBegin; 217c58f1c22SToby Isaac PetscValidPointer(name, 2); 218c58f1c22SToby Isaac *name = label->name; 219c58f1c22SToby Isaac PetscFunctionReturn(0); 220c58f1c22SToby Isaac } 221c58f1c22SToby Isaac 222c58f1c22SToby Isaac static PetscErrorCode DMLabelView_Ascii(DMLabel label, PetscViewer viewer) 223c58f1c22SToby Isaac { 224c58f1c22SToby Isaac PetscInt v; 225c58f1c22SToby Isaac PetscMPIInt rank; 226c58f1c22SToby Isaac PetscErrorCode ierr; 227c58f1c22SToby Isaac 228c58f1c22SToby Isaac PetscFunctionBegin; 229c58f1c22SToby Isaac ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank);CHKERRQ(ierr); 230c58f1c22SToby Isaac ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 231c58f1c22SToby Isaac if (label) { 232c58f1c22SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Label '%s':\n", label->name);CHKERRQ(ierr); 233c58f1c22SToby Isaac if (label->bt) {ierr = PetscViewerASCIIPrintf(viewer, " Index has been calculated in [%D, %D)\n", label->pStart, label->pEnd);CHKERRQ(ierr);} 234c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 235c58f1c22SToby Isaac const PetscInt value = label->stratumValues[v]; 236ad8374ffSToby Isaac const PetscInt *points; 237c58f1c22SToby Isaac PetscInt p; 238c58f1c22SToby Isaac 239ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v],&points);CHKERRQ(ierr); 240c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 241ad8374ffSToby Isaac ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %D (%D)\n", rank, points[p], value);CHKERRQ(ierr); 242c58f1c22SToby Isaac } 243ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 244c58f1c22SToby Isaac } 245c58f1c22SToby Isaac } 246c58f1c22SToby Isaac ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 247c58f1c22SToby Isaac ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 248c58f1c22SToby Isaac PetscFunctionReturn(0); 249c58f1c22SToby Isaac } 250c58f1c22SToby Isaac 251c58f1c22SToby Isaac /*@C 252c58f1c22SToby Isaac DMLabelView - View the label 253c58f1c22SToby Isaac 254c58f1c22SToby Isaac Input Parameters: 255c58f1c22SToby Isaac + label - The DMLabel 256c58f1c22SToby Isaac - viewer - The PetscViewer 257c58f1c22SToby Isaac 258c58f1c22SToby Isaac Level: intermediate 259c58f1c22SToby Isaac 260c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelDestroy() 261c58f1c22SToby Isaac @*/ 262c58f1c22SToby Isaac PetscErrorCode DMLabelView(DMLabel label, PetscViewer viewer) 263c58f1c22SToby Isaac { 264c58f1c22SToby Isaac PetscBool iascii; 265c58f1c22SToby Isaac PetscErrorCode ierr; 266c58f1c22SToby Isaac 267c58f1c22SToby Isaac PetscFunctionBegin; 268c58f1c22SToby Isaac PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 269c58f1c22SToby Isaac if (label) {ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr);} 270c58f1c22SToby Isaac ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii);CHKERRQ(ierr); 271c58f1c22SToby Isaac if (iascii) { 272c58f1c22SToby Isaac ierr = DMLabelView_Ascii(label, viewer);CHKERRQ(ierr); 273c58f1c22SToby Isaac } 274c58f1c22SToby Isaac PetscFunctionReturn(0); 275c58f1c22SToby Isaac } 276c58f1c22SToby Isaac 27784f0b6dfSMatthew G. Knepley /*@ 27884f0b6dfSMatthew G. Knepley DMLabelDestroy - Destroys a DMLabel 27984f0b6dfSMatthew G. Knepley 28084f0b6dfSMatthew G. Knepley Input Parameter: 28184f0b6dfSMatthew G. Knepley . label - The DMLabel 28284f0b6dfSMatthew G. Knepley 28384f0b6dfSMatthew G. Knepley Level: beginner 28484f0b6dfSMatthew G. Knepley 28584f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate() 28684f0b6dfSMatthew G. Knepley @*/ 287c58f1c22SToby Isaac PetscErrorCode DMLabelDestroy(DMLabel *label) 288c58f1c22SToby Isaac { 289c58f1c22SToby Isaac PetscInt v; 290c58f1c22SToby Isaac PetscErrorCode ierr; 291c58f1c22SToby Isaac 292c58f1c22SToby Isaac PetscFunctionBegin; 293c58f1c22SToby Isaac if (!(*label)) PetscFunctionReturn(0); 294c58f1c22SToby Isaac if (--(*label)->refct > 0) PetscFunctionReturn(0); 295c58f1c22SToby Isaac ierr = PetscFree((*label)->name);CHKERRQ(ierr); 296c58f1c22SToby Isaac ierr = PetscFree((*label)->stratumValues);CHKERRQ(ierr); 297c58f1c22SToby Isaac ierr = PetscFree((*label)->stratumSizes);CHKERRQ(ierr); 298ad8374ffSToby Isaac for (v = 0; v < (*label)->numStrata; ++v) {ierr = ISDestroy(&((*label)->points[v]));CHKERRQ(ierr);} 299c58f1c22SToby Isaac ierr = PetscFree((*label)->points);CHKERRQ(ierr); 300ad8374ffSToby Isaac ierr = PetscFree((*label)->validIS);CHKERRQ(ierr); 301c58f1c22SToby Isaac if ((*label)->ht) { 302c58f1c22SToby Isaac for (v = 0; v < (*label)->numStrata; ++v) {PetscHashIDestroy((*label)->ht[v]);} 303c58f1c22SToby Isaac ierr = PetscFree((*label)->ht);CHKERRQ(ierr); 304c58f1c22SToby Isaac } 305c58f1c22SToby Isaac ierr = PetscBTDestroy(&(*label)->bt);CHKERRQ(ierr); 306c58f1c22SToby Isaac ierr = PetscFree(*label);CHKERRQ(ierr); 307c58f1c22SToby Isaac PetscFunctionReturn(0); 308c58f1c22SToby Isaac } 309c58f1c22SToby Isaac 31084f0b6dfSMatthew G. Knepley /*@ 31184f0b6dfSMatthew G. Knepley DMLabelDuplicate - Duplicates a DMLabel 31284f0b6dfSMatthew G. Knepley 31384f0b6dfSMatthew G. Knepley Input Parameter: 31484f0b6dfSMatthew G. Knepley . label - The DMLabel 31584f0b6dfSMatthew G. Knepley 31684f0b6dfSMatthew G. Knepley Output Parameter: 31784f0b6dfSMatthew G. Knepley . labelnew - location to put new vector 31884f0b6dfSMatthew G. Knepley 31984f0b6dfSMatthew G. Knepley Level: intermediate 32084f0b6dfSMatthew G. Knepley 32184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelDestroy() 32284f0b6dfSMatthew G. Knepley @*/ 323c58f1c22SToby Isaac PetscErrorCode DMLabelDuplicate(DMLabel label, DMLabel *labelnew) 324c58f1c22SToby Isaac { 325ad8374ffSToby Isaac PetscInt v; 326c58f1c22SToby Isaac PetscErrorCode ierr; 327c58f1c22SToby Isaac 328c58f1c22SToby Isaac PetscFunctionBegin; 329c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 330c58f1c22SToby Isaac ierr = PetscNew(labelnew);CHKERRQ(ierr); 331c58f1c22SToby Isaac ierr = PetscStrallocpy(label->name, &(*labelnew)->name);CHKERRQ(ierr); 332c58f1c22SToby Isaac 333c58f1c22SToby Isaac (*labelnew)->refct = 1; 334c58f1c22SToby Isaac (*labelnew)->numStrata = label->numStrata; 3355aa44df4SToby Isaac (*labelnew)->defaultValue = label->defaultValue; 336c58f1c22SToby Isaac if (label->numStrata) { 337c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->stratumValues);CHKERRQ(ierr); 338c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->stratumSizes);CHKERRQ(ierr); 339c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->ht);CHKERRQ(ierr); 340c58f1c22SToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->points);CHKERRQ(ierr); 341ad8374ffSToby Isaac ierr = PetscMalloc1(label->numStrata, &(*labelnew)->validIS);CHKERRQ(ierr); 342c58f1c22SToby Isaac /* Could eliminate unused space here */ 343c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 344c58f1c22SToby Isaac PetscHashICreate((*labelnew)->ht[v]); 345ad8374ffSToby Isaac (*labelnew)->validIS[v] = PETSC_TRUE; 346c58f1c22SToby Isaac (*labelnew)->stratumValues[v] = label->stratumValues[v]; 347c58f1c22SToby Isaac (*labelnew)->stratumSizes[v] = label->stratumSizes[v]; 348ad8374ffSToby Isaac ierr = PetscObjectReference((PetscObject) (label->points[v]));CHKERRQ(ierr); 349ad8374ffSToby Isaac (*labelnew)->points[v] = label->points[v]; 350c58f1c22SToby Isaac } 351c58f1c22SToby Isaac } 352c58f1c22SToby Isaac (*labelnew)->pStart = -1; 353c58f1c22SToby Isaac (*labelnew)->pEnd = -1; 354c58f1c22SToby Isaac (*labelnew)->bt = NULL; 355c58f1c22SToby Isaac PetscFunctionReturn(0); 356c58f1c22SToby Isaac } 357c58f1c22SToby Isaac 358c58f1c22SToby Isaac /* This can be hooked into SetValue(), ClearValue(), etc. for updating */ 359c58f1c22SToby Isaac PetscErrorCode DMLabelCreateIndex(DMLabel label, PetscInt pStart, PetscInt pEnd) 360c58f1c22SToby Isaac { 361c58f1c22SToby Isaac PetscInt v; 362c58f1c22SToby Isaac PetscErrorCode ierr; 363c58f1c22SToby Isaac 364c58f1c22SToby Isaac PetscFunctionBegin; 365c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 366c58f1c22SToby Isaac if (label->bt) {ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr);} 367c58f1c22SToby Isaac label->pStart = pStart; 368c58f1c22SToby Isaac label->pEnd = pEnd; 369c58f1c22SToby Isaac ierr = PetscBTCreate(pEnd - pStart, &label->bt);CHKERRQ(ierr); 370c58f1c22SToby Isaac ierr = PetscBTMemzero(pEnd - pStart, label->bt);CHKERRQ(ierr); 371c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 372ad8374ffSToby Isaac const PetscInt *points; 373c58f1c22SToby Isaac PetscInt i; 374c58f1c22SToby Isaac 375ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v],&points);CHKERRQ(ierr); 376c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 377ad8374ffSToby Isaac const PetscInt point = points[i]; 378c58f1c22SToby Isaac 379c58f1c22SToby Isaac if ((point < pStart) || (point >= pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, pStart, pEnd); 380c58f1c22SToby Isaac ierr = PetscBTSet(label->bt, point - pStart);CHKERRQ(ierr); 381c58f1c22SToby Isaac } 382ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 383c58f1c22SToby Isaac } 384c58f1c22SToby Isaac PetscFunctionReturn(0); 385c58f1c22SToby Isaac } 386c58f1c22SToby Isaac 387c58f1c22SToby Isaac PetscErrorCode DMLabelDestroyIndex(DMLabel label) 388c58f1c22SToby Isaac { 389c58f1c22SToby Isaac PetscErrorCode ierr; 390c58f1c22SToby Isaac 391c58f1c22SToby Isaac PetscFunctionBegin; 392c58f1c22SToby Isaac label->pStart = -1; 393c58f1c22SToby Isaac label->pEnd = -1; 394c58f1c22SToby Isaac if (label->bt) {ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr);} 395c58f1c22SToby Isaac PetscFunctionReturn(0); 396c58f1c22SToby Isaac } 397c58f1c22SToby Isaac 398c58f1c22SToby Isaac /*@ 399c58f1c22SToby Isaac DMLabelHasValue - Determine whether a label assigns the value to any point 400c58f1c22SToby Isaac 401c58f1c22SToby Isaac Input Parameters: 402c58f1c22SToby Isaac + label - the DMLabel 403c58f1c22SToby Isaac - value - the value 404c58f1c22SToby Isaac 405c58f1c22SToby Isaac Output Parameter: 406c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this value to any point 407c58f1c22SToby Isaac 408c58f1c22SToby Isaac Level: developer 409c58f1c22SToby Isaac 410c58f1c22SToby Isaac .seealso: DMLabelHasPoint(), DMLabelGetValue(), DMLabelSetValue() 411c58f1c22SToby Isaac @*/ 412c58f1c22SToby Isaac PetscErrorCode DMLabelHasValue(DMLabel label, PetscInt value, PetscBool *contains) 413c58f1c22SToby Isaac { 414c58f1c22SToby Isaac PetscInt v; 415c58f1c22SToby Isaac 416c58f1c22SToby Isaac PetscFunctionBegin; 417c58f1c22SToby Isaac PetscValidPointer(contains, 3); 418c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 419c58f1c22SToby Isaac if (value == label->stratumValues[v]) break; 420c58f1c22SToby Isaac } 421c58f1c22SToby Isaac *contains = (v < label->numStrata ? PETSC_TRUE : PETSC_FALSE); 422c58f1c22SToby Isaac PetscFunctionReturn(0); 423c58f1c22SToby Isaac } 424c58f1c22SToby Isaac 425c58f1c22SToby Isaac /*@ 426c58f1c22SToby Isaac DMLabelHasPoint - Determine whether a label assigns a value to a point 427c58f1c22SToby Isaac 428c58f1c22SToby Isaac Input Parameters: 429c58f1c22SToby Isaac + label - the DMLabel 430c58f1c22SToby Isaac - point - the point 431c58f1c22SToby Isaac 432c58f1c22SToby Isaac Output Parameter: 433c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this point to a value 434c58f1c22SToby Isaac 435c58f1c22SToby Isaac Note: The user must call DMLabelCreateIndex() before this function. 436c58f1c22SToby Isaac 437c58f1c22SToby Isaac Level: developer 438c58f1c22SToby Isaac 439c58f1c22SToby Isaac .seealso: DMLabelCreateIndex(), DMLabelGetValue(), DMLabelSetValue() 440c58f1c22SToby Isaac @*/ 441c58f1c22SToby Isaac PetscErrorCode DMLabelHasPoint(DMLabel label, PetscInt point, PetscBool *contains) 442c58f1c22SToby Isaac { 443c58f1c22SToby Isaac PetscErrorCode ierr; 444c58f1c22SToby Isaac 445c58f1c22SToby Isaac PetscFunctionBeginHot; 446c58f1c22SToby Isaac PetscValidPointer(contains, 3); 447c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 448c58f1c22SToby Isaac #if defined(PETSC_USE_DEBUG) 449c58f1c22SToby Isaac if (!label->bt) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call DMLabelCreateIndex() before DMLabelHasPoint()"); 450c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 451c58f1c22SToby Isaac #endif 452c58f1c22SToby Isaac *contains = PetscBTLookup(label->bt, point - label->pStart) ? PETSC_TRUE : PETSC_FALSE; 453c58f1c22SToby Isaac PetscFunctionReturn(0); 454c58f1c22SToby Isaac } 455c58f1c22SToby Isaac 456c58f1c22SToby Isaac /*@ 457c58f1c22SToby Isaac DMLabelStratumHasPoint - Return true if the stratum contains a point 458c58f1c22SToby Isaac 459c58f1c22SToby Isaac Input Parameters: 460c58f1c22SToby Isaac + label - the DMLabel 461c58f1c22SToby Isaac . value - the stratum value 462c58f1c22SToby Isaac - point - the point 463c58f1c22SToby Isaac 464c58f1c22SToby Isaac Output Parameter: 465c58f1c22SToby Isaac . contains - true if the stratum contains the point 466c58f1c22SToby Isaac 467c58f1c22SToby Isaac Level: intermediate 468c58f1c22SToby Isaac 469c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelSetValue(), DMLabelClearValue() 470c58f1c22SToby Isaac @*/ 471c58f1c22SToby Isaac PetscErrorCode DMLabelStratumHasPoint(DMLabel label, PetscInt value, PetscInt point, PetscBool *contains) 472c58f1c22SToby Isaac { 473c58f1c22SToby Isaac PetscInt v; 474c58f1c22SToby Isaac PetscErrorCode ierr; 475c58f1c22SToby Isaac 476c58f1c22SToby Isaac PetscFunctionBegin; 477c58f1c22SToby Isaac PetscValidPointer(contains, 4); 478c58f1c22SToby Isaac *contains = PETSC_FALSE; 479c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 480c58f1c22SToby Isaac if (label->stratumValues[v] == value) { 481ad8374ffSToby Isaac if (label->validIS[v]) { 482c58f1c22SToby Isaac PetscInt i; 483c58f1c22SToby Isaac 484a2d74346SToby Isaac ierr = ISLocate(label->points[v],point,&i);CHKERRQ(ierr); 485c58f1c22SToby Isaac if (i >= 0) { 486c58f1c22SToby Isaac *contains = PETSC_TRUE; 487c58f1c22SToby Isaac break; 488c58f1c22SToby Isaac } 489c58f1c22SToby Isaac } else { 490c58f1c22SToby Isaac PetscBool has; 491c58f1c22SToby Isaac 492c58f1c22SToby Isaac PetscHashIHasKey(label->ht[v], point, has); 493c58f1c22SToby Isaac if (has) { 494c58f1c22SToby Isaac *contains = PETSC_TRUE; 495c58f1c22SToby Isaac break; 496c58f1c22SToby Isaac } 497c58f1c22SToby Isaac } 498c58f1c22SToby Isaac } 499c58f1c22SToby Isaac } 500c58f1c22SToby Isaac PetscFunctionReturn(0); 501c58f1c22SToby Isaac } 502c58f1c22SToby Isaac 50384f0b6dfSMatthew G. Knepley /*@ 5045aa44df4SToby Isaac DMLabelGetDefaultValue - Get the default value returned by DMLabelGetValue() if a point has not been explicitly given a value. 5055aa44df4SToby Isaac When a label is created, it is initialized to -1. 5065aa44df4SToby Isaac 5075aa44df4SToby Isaac Input parameter: 5085aa44df4SToby Isaac . label - a DMLabel object 5095aa44df4SToby Isaac 5105aa44df4SToby Isaac Output parameter: 5115aa44df4SToby Isaac . defaultValue - the default value 5125aa44df4SToby Isaac 5135aa44df4SToby Isaac Level: beginner 5145aa44df4SToby Isaac 5155aa44df4SToby Isaac .seealso: DMLabelSetDefaultValue(), DMLabelGetValue(), DMLabelSetValue() 51684f0b6dfSMatthew G. Knepley @*/ 5175aa44df4SToby Isaac PetscErrorCode DMLabelGetDefaultValue(DMLabel label, PetscInt *defaultValue) 5185aa44df4SToby Isaac { 5195aa44df4SToby Isaac PetscFunctionBegin; 5205aa44df4SToby Isaac *defaultValue = label->defaultValue; 5215aa44df4SToby Isaac PetscFunctionReturn(0); 5225aa44df4SToby Isaac } 5235aa44df4SToby Isaac 52484f0b6dfSMatthew G. Knepley /*@ 5255aa44df4SToby Isaac DMLabelSetDefaultValue - Set the default value returned by DMLabelGetValue() if a point has not been explicitly given a value. 5265aa44df4SToby Isaac When a label is created, it is initialized to -1. 5275aa44df4SToby Isaac 5285aa44df4SToby Isaac Input parameter: 5295aa44df4SToby Isaac . label - a DMLabel object 5305aa44df4SToby Isaac 5315aa44df4SToby Isaac Output parameter: 5325aa44df4SToby Isaac . defaultValue - the default value 5335aa44df4SToby Isaac 5345aa44df4SToby Isaac Level: beginner 5355aa44df4SToby Isaac 5365aa44df4SToby Isaac .seealso: DMLabelGetDefaultValue(), DMLabelGetValue(), DMLabelSetValue() 53784f0b6dfSMatthew G. Knepley @*/ 5385aa44df4SToby Isaac PetscErrorCode DMLabelSetDefaultValue(DMLabel label, PetscInt defaultValue) 5395aa44df4SToby Isaac { 5405aa44df4SToby Isaac PetscFunctionBegin; 5415aa44df4SToby Isaac label->defaultValue = defaultValue; 5425aa44df4SToby Isaac PetscFunctionReturn(0); 5435aa44df4SToby Isaac } 5445aa44df4SToby Isaac 545c58f1c22SToby Isaac /*@ 5465aa44df4SToby Isaac DMLabelGetValue - Return the value a label assigns to a point, or the label's default value (which is initially -1, and can be changed with DMLabelSetDefaultValue()) 547c58f1c22SToby Isaac 548c58f1c22SToby Isaac Input Parameters: 549c58f1c22SToby Isaac + label - the DMLabel 550c58f1c22SToby Isaac - point - the point 551c58f1c22SToby Isaac 552c58f1c22SToby Isaac Output Parameter: 553c58f1c22SToby Isaac . value - The point value, or -1 554c58f1c22SToby Isaac 555c58f1c22SToby Isaac Level: intermediate 556c58f1c22SToby Isaac 5575aa44df4SToby Isaac .seealso: DMLabelCreate(), DMLabelSetValue(), DMLabelClearValue(), DMLabelGetDefaultValue(), DMLabelSetDefaultValue() 558c58f1c22SToby Isaac @*/ 559c58f1c22SToby Isaac PetscErrorCode DMLabelGetValue(DMLabel label, PetscInt point, PetscInt *value) 560c58f1c22SToby Isaac { 561c58f1c22SToby Isaac PetscInt v; 562c58f1c22SToby Isaac PetscErrorCode ierr; 563c58f1c22SToby Isaac 564c58f1c22SToby Isaac PetscFunctionBegin; 565c58f1c22SToby Isaac PetscValidPointer(value, 3); 5665aa44df4SToby Isaac *value = label->defaultValue; 567c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 568ad8374ffSToby Isaac if (label->validIS[v]) { 569c58f1c22SToby Isaac PetscInt i; 570c58f1c22SToby Isaac 571a2d74346SToby Isaac ierr = ISLocate(label->points[v],point,&i);CHKERRQ(ierr); 572c58f1c22SToby Isaac if (i >= 0) { 573c58f1c22SToby Isaac *value = label->stratumValues[v]; 574c58f1c22SToby Isaac break; 575c58f1c22SToby Isaac } 576c58f1c22SToby Isaac } else { 577c58f1c22SToby Isaac PetscBool has; 578c58f1c22SToby Isaac 579c58f1c22SToby Isaac PetscHashIHasKey(label->ht[v], point, has); 580c58f1c22SToby Isaac if (has) { 581c58f1c22SToby Isaac *value = label->stratumValues[v]; 582c58f1c22SToby Isaac break; 583c58f1c22SToby Isaac } 584c58f1c22SToby Isaac } 585c58f1c22SToby Isaac } 586c58f1c22SToby Isaac PetscFunctionReturn(0); 587c58f1c22SToby Isaac } 588c58f1c22SToby Isaac 589c58f1c22SToby Isaac /*@ 5905aa44df4SToby Isaac DMLabelSetValue - Set the value a label assigns to a point. If the value is the same as the label's default value (which is initially -1, and can be changed with DMLabelSetDefaultValue() to somethingg different), then this function will do nothing. 591c58f1c22SToby Isaac 592c58f1c22SToby Isaac Input Parameters: 593c58f1c22SToby Isaac + label - the DMLabel 594c58f1c22SToby Isaac . point - the point 595c58f1c22SToby Isaac - value - The point value 596c58f1c22SToby Isaac 597c58f1c22SToby Isaac Level: intermediate 598c58f1c22SToby Isaac 5995aa44df4SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelClearValue(), DMLabelGetDefaultValue(), DMLabelSetDefaultValue() 600c58f1c22SToby Isaac @*/ 601c58f1c22SToby Isaac PetscErrorCode DMLabelSetValue(DMLabel label, PetscInt point, PetscInt value) 602c58f1c22SToby Isaac { 603c58f1c22SToby Isaac PETSC_UNUSED PetscHashIIter iter, ret; 604c58f1c22SToby Isaac PetscInt v; 605c58f1c22SToby Isaac PetscErrorCode ierr; 606c58f1c22SToby Isaac 607c58f1c22SToby Isaac PetscFunctionBegin; 608c58f1c22SToby Isaac /* Find, or add, label value */ 6095aa44df4SToby Isaac if (value == label->defaultValue) PetscFunctionReturn(0); 610c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 611c58f1c22SToby Isaac if (label->stratumValues[v] == value) break; 612c58f1c22SToby Isaac } 613c58f1c22SToby Isaac /* Create new table */ 614c58f1c22SToby Isaac if (v >= label->numStrata) {ierr = DMLabelAddStratum(label, value);CHKERRQ(ierr);} 615c58f1c22SToby Isaac ierr = DMLabelMakeInvalid_Private(label, v);CHKERRQ(ierr); 616c58f1c22SToby Isaac /* Set key */ 617c58f1c22SToby Isaac PetscHashIPut(label->ht[v], point, ret, iter); 618c58f1c22SToby Isaac PetscFunctionReturn(0); 619c58f1c22SToby Isaac } 620c58f1c22SToby Isaac 621c58f1c22SToby Isaac /*@ 622c58f1c22SToby Isaac DMLabelClearValue - Clear the value a label assigns to a point 623c58f1c22SToby Isaac 624c58f1c22SToby Isaac Input Parameters: 625c58f1c22SToby Isaac + label - the DMLabel 626c58f1c22SToby Isaac . point - the point 627c58f1c22SToby Isaac - value - The point value 628c58f1c22SToby Isaac 629c58f1c22SToby Isaac Level: intermediate 630c58f1c22SToby Isaac 631c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue() 632c58f1c22SToby Isaac @*/ 633c58f1c22SToby Isaac PetscErrorCode DMLabelClearValue(DMLabel label, PetscInt point, PetscInt value) 634c58f1c22SToby Isaac { 635ad8374ffSToby Isaac PetscInt v; 636c58f1c22SToby Isaac PetscErrorCode ierr; 637c58f1c22SToby Isaac 638c58f1c22SToby Isaac PetscFunctionBegin; 639c58f1c22SToby Isaac /* Find label value */ 640c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 641c58f1c22SToby Isaac if (label->stratumValues[v] == value) break; 642c58f1c22SToby Isaac } 643c58f1c22SToby Isaac if (v >= label->numStrata) PetscFunctionReturn(0); 644eeed21e7SToby Isaac if (label->validIS[v]) { 645eeed21e7SToby Isaac ierr = DMLabelMakeInvalid_Private(label,v);CHKERRQ(ierr); 646eeed21e7SToby Isaac } 647eeed21e7SToby Isaac if (label->bt) { 648eeed21e7SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 649eeed21e7SToby Isaac ierr = PetscBTClear(label->bt, point - label->pStart);CHKERRQ(ierr); 650eeed21e7SToby Isaac } 651c58f1c22SToby Isaac ierr = PetscHashIDelKey(label->ht[v], point);CHKERRQ(ierr); 652c58f1c22SToby Isaac PetscFunctionReturn(0); 653c58f1c22SToby Isaac } 654c58f1c22SToby Isaac 655c58f1c22SToby Isaac /*@ 656c58f1c22SToby Isaac DMLabelInsertIS - Set all points in the IS to a value 657c58f1c22SToby Isaac 658c58f1c22SToby Isaac Input Parameters: 659c58f1c22SToby Isaac + label - the DMLabel 660c58f1c22SToby Isaac . is - the point IS 661c58f1c22SToby Isaac - value - The point value 662c58f1c22SToby Isaac 663c58f1c22SToby Isaac Level: intermediate 664c58f1c22SToby Isaac 665c58f1c22SToby Isaac .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 666c58f1c22SToby Isaac @*/ 667c58f1c22SToby Isaac PetscErrorCode DMLabelInsertIS(DMLabel label, IS is, PetscInt value) 668c58f1c22SToby Isaac { 669c58f1c22SToby Isaac const PetscInt *points; 670c58f1c22SToby Isaac PetscInt n, p; 671c58f1c22SToby Isaac PetscErrorCode ierr; 672c58f1c22SToby Isaac 673c58f1c22SToby Isaac PetscFunctionBegin; 674c58f1c22SToby Isaac PetscValidHeaderSpecific(is, IS_CLASSID, 2); 675c58f1c22SToby Isaac ierr = ISGetLocalSize(is, &n);CHKERRQ(ierr); 676c58f1c22SToby Isaac ierr = ISGetIndices(is, &points);CHKERRQ(ierr); 677c58f1c22SToby Isaac for (p = 0; p < n; ++p) {ierr = DMLabelSetValue(label, points[p], value);CHKERRQ(ierr);} 678c58f1c22SToby Isaac ierr = ISRestoreIndices(is, &points);CHKERRQ(ierr); 679c58f1c22SToby Isaac PetscFunctionReturn(0); 680c58f1c22SToby Isaac } 681c58f1c22SToby Isaac 68284f0b6dfSMatthew G. Knepley /*@ 68384f0b6dfSMatthew G. Knepley DMLabelGetNumValues - Get the number of values that the DMLabel takes 68484f0b6dfSMatthew G. Knepley 68584f0b6dfSMatthew G. Knepley Input Parameter: 68684f0b6dfSMatthew G. Knepley . label - the DMLabel 68784f0b6dfSMatthew G. Knepley 68884f0b6dfSMatthew G. Knepley Output Paramater: 68984f0b6dfSMatthew G. Knepley . numValues - the number of values 69084f0b6dfSMatthew G. Knepley 69184f0b6dfSMatthew G. Knepley Level: intermediate 69284f0b6dfSMatthew G. Knepley 69384f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 69484f0b6dfSMatthew G. Knepley @*/ 695c58f1c22SToby Isaac PetscErrorCode DMLabelGetNumValues(DMLabel label, PetscInt *numValues) 696c58f1c22SToby Isaac { 697c58f1c22SToby Isaac PetscFunctionBegin; 698c58f1c22SToby Isaac PetscValidPointer(numValues, 2); 699c58f1c22SToby Isaac *numValues = label->numStrata; 700c58f1c22SToby Isaac PetscFunctionReturn(0); 701c58f1c22SToby Isaac } 702c58f1c22SToby Isaac 70384f0b6dfSMatthew G. Knepley /*@ 70484f0b6dfSMatthew G. Knepley DMLabelGetValueIS - Get an IS of all values that the DMlabel takes 70584f0b6dfSMatthew G. Knepley 70684f0b6dfSMatthew G. Knepley Input Parameter: 70784f0b6dfSMatthew G. Knepley . label - the DMLabel 70884f0b6dfSMatthew G. Knepley 70984f0b6dfSMatthew G. Knepley Output Paramater: 71084f0b6dfSMatthew G. Knepley . is - the value IS 71184f0b6dfSMatthew G. Knepley 71284f0b6dfSMatthew G. Knepley Level: intermediate 71384f0b6dfSMatthew G. Knepley 71484f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 71584f0b6dfSMatthew G. Knepley @*/ 716c58f1c22SToby Isaac PetscErrorCode DMLabelGetValueIS(DMLabel label, IS *values) 717c58f1c22SToby Isaac { 718c58f1c22SToby Isaac PetscErrorCode ierr; 719c58f1c22SToby Isaac 720c58f1c22SToby Isaac PetscFunctionBegin; 721c58f1c22SToby Isaac PetscValidPointer(values, 2); 722c58f1c22SToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values);CHKERRQ(ierr); 723c58f1c22SToby Isaac PetscFunctionReturn(0); 724c58f1c22SToby Isaac } 725c58f1c22SToby Isaac 72684f0b6dfSMatthew G. Knepley /*@ 72784f0b6dfSMatthew G. Knepley DMLabelHasStratum - Determine whether points exist with the given value 72884f0b6dfSMatthew G. Knepley 72984f0b6dfSMatthew G. Knepley Input Parameters: 73084f0b6dfSMatthew G. Knepley + label - the DMLabel 73184f0b6dfSMatthew G. Knepley - value - the stratum value 73284f0b6dfSMatthew G. Knepley 73384f0b6dfSMatthew G. Knepley Output Paramater: 73484f0b6dfSMatthew G. Knepley . exists - Flag saying whether points exist 73584f0b6dfSMatthew G. Knepley 73684f0b6dfSMatthew G. Knepley Level: intermediate 73784f0b6dfSMatthew G. Knepley 73884f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 73984f0b6dfSMatthew G. Knepley @*/ 740fada774cSMatthew G. Knepley PetscErrorCode DMLabelHasStratum(DMLabel label, PetscInt value, PetscBool *exists) 741fada774cSMatthew G. Knepley { 742fada774cSMatthew G. Knepley PetscInt v; 743fada774cSMatthew G. Knepley 744fada774cSMatthew G. Knepley PetscFunctionBegin; 745fada774cSMatthew G. Knepley PetscValidPointer(exists, 3); 746fada774cSMatthew G. Knepley *exists = PETSC_FALSE; 747fada774cSMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 748fada774cSMatthew G. Knepley if (label->stratumValues[v] == value) { 749fada774cSMatthew G. Knepley *exists = PETSC_TRUE; 750fada774cSMatthew G. Knepley break; 751fada774cSMatthew G. Knepley } 752fada774cSMatthew G. Knepley } 753fada774cSMatthew G. Knepley PetscFunctionReturn(0); 754fada774cSMatthew G. Knepley } 755fada774cSMatthew G. Knepley 75684f0b6dfSMatthew G. Knepley /*@ 75784f0b6dfSMatthew G. Knepley DMLabelGetStratumSize - Get the size of a stratum 75884f0b6dfSMatthew G. Knepley 75984f0b6dfSMatthew G. Knepley Input Parameters: 76084f0b6dfSMatthew G. Knepley + label - the DMLabel 76184f0b6dfSMatthew G. Knepley - value - the stratum value 76284f0b6dfSMatthew G. Knepley 76384f0b6dfSMatthew G. Knepley Output Paramater: 76484f0b6dfSMatthew G. Knepley . size - The number of points in the stratum 76584f0b6dfSMatthew G. Knepley 76684f0b6dfSMatthew G. Knepley Level: intermediate 76784f0b6dfSMatthew G. Knepley 76884f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 76984f0b6dfSMatthew G. Knepley @*/ 770c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumSize(DMLabel label, PetscInt value, PetscInt *size) 771c58f1c22SToby Isaac { 772c58f1c22SToby Isaac PetscInt v; 773c58f1c22SToby Isaac PetscErrorCode ierr; 774c58f1c22SToby Isaac 775c58f1c22SToby Isaac PetscFunctionBegin; 776c58f1c22SToby Isaac PetscValidPointer(size, 3); 777c58f1c22SToby Isaac *size = 0; 778c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 779c58f1c22SToby Isaac if (label->stratumValues[v] == value) { 780c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 781c58f1c22SToby Isaac *size = label->stratumSizes[v]; 782c58f1c22SToby Isaac break; 783c58f1c22SToby Isaac } 784c58f1c22SToby Isaac } 785c58f1c22SToby Isaac PetscFunctionReturn(0); 786c58f1c22SToby Isaac } 787c58f1c22SToby Isaac 78884f0b6dfSMatthew G. Knepley /*@ 78984f0b6dfSMatthew G. Knepley DMLabelGetStratumBounds - Get the largest and smallest point of a stratum 79084f0b6dfSMatthew G. Knepley 79184f0b6dfSMatthew G. Knepley Input Parameters: 79284f0b6dfSMatthew G. Knepley + label - the DMLabel 79384f0b6dfSMatthew G. Knepley - value - the stratum value 79484f0b6dfSMatthew G. Knepley 79584f0b6dfSMatthew G. Knepley Output Paramaters: 79684f0b6dfSMatthew G. Knepley + start - the smallest point in the stratum 79784f0b6dfSMatthew G. Knepley - end - the largest point in the stratum 79884f0b6dfSMatthew G. Knepley 79984f0b6dfSMatthew G. Knepley Level: intermediate 80084f0b6dfSMatthew G. Knepley 80184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 80284f0b6dfSMatthew G. Knepley @*/ 803c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumBounds(DMLabel label, PetscInt value, PetscInt *start, PetscInt *end) 804c58f1c22SToby Isaac { 805c58f1c22SToby Isaac PetscInt v; 806c58f1c22SToby Isaac PetscErrorCode ierr; 807c58f1c22SToby Isaac 808c58f1c22SToby Isaac PetscFunctionBegin; 809c58f1c22SToby Isaac if (start) {PetscValidPointer(start, 3); *start = 0;} 810c58f1c22SToby Isaac if (end) {PetscValidPointer(end, 4); *end = 0;} 811c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 812d6cb179aSToby Isaac PetscInt min, max; 813ad8374ffSToby Isaac 814c58f1c22SToby Isaac if (label->stratumValues[v] != value) continue; 815c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 816c58f1c22SToby Isaac if (label->stratumSizes[v] <= 0) break; 817d6cb179aSToby Isaac ierr = ISGetMinMax(label->points[v], &min, &max);CHKERRQ(ierr); 818d6cb179aSToby Isaac if (start) *start = min; 819d6cb179aSToby Isaac if (end) *end = max+1; 820c58f1c22SToby Isaac break; 821c58f1c22SToby Isaac } 822c58f1c22SToby Isaac PetscFunctionReturn(0); 823c58f1c22SToby Isaac } 824c58f1c22SToby Isaac 82584f0b6dfSMatthew G. Knepley /*@ 82684f0b6dfSMatthew G. Knepley DMLabelGetStratumIS - Get an IS with the stratum points 82784f0b6dfSMatthew G. Knepley 82884f0b6dfSMatthew G. Knepley Input Parameters: 82984f0b6dfSMatthew G. Knepley + label - the DMLabel 83084f0b6dfSMatthew G. Knepley - value - the stratum value 83184f0b6dfSMatthew G. Knepley 83284f0b6dfSMatthew G. Knepley Output Paramater: 83384f0b6dfSMatthew G. Knepley . points - The stratum points 83484f0b6dfSMatthew G. Knepley 83584f0b6dfSMatthew G. Knepley Level: intermediate 83684f0b6dfSMatthew G. Knepley 83784f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 83884f0b6dfSMatthew G. Knepley @*/ 839c58f1c22SToby Isaac PetscErrorCode DMLabelGetStratumIS(DMLabel label, PetscInt value, IS *points) 840c58f1c22SToby Isaac { 841c58f1c22SToby Isaac PetscInt v; 842c58f1c22SToby Isaac PetscErrorCode ierr; 843c58f1c22SToby Isaac 844c58f1c22SToby Isaac PetscFunctionBegin; 845c58f1c22SToby Isaac PetscValidPointer(points, 3); 846c58f1c22SToby Isaac *points = NULL; 847c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 848c58f1c22SToby Isaac if (label->stratumValues[v] == value) { 849c58f1c22SToby Isaac ierr = DMLabelMakeValid_Private(label, v);CHKERRQ(ierr); 850ad8374ffSToby Isaac if (label->validIS[v]) { 851ad8374ffSToby Isaac ierr = PetscObjectReference((PetscObject) label->points[v]);CHKERRQ(ierr); 852ad8374ffSToby Isaac *points = label->points[v]; 853c58f1c22SToby Isaac } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Need to implement this to speedup Stratify"); 854c58f1c22SToby Isaac break; 855c58f1c22SToby Isaac } 856c58f1c22SToby Isaac } 857c58f1c22SToby Isaac PetscFunctionReturn(0); 858c58f1c22SToby Isaac } 859c58f1c22SToby Isaac 86084f0b6dfSMatthew G. Knepley /*@ 86184f0b6dfSMatthew G. Knepley DMLabelSetStratumIS - Set the stratum points using an IS 86284f0b6dfSMatthew G. Knepley 86384f0b6dfSMatthew G. Knepley Input Parameters: 86484f0b6dfSMatthew G. Knepley + label - the DMLabel 86584f0b6dfSMatthew G. Knepley . value - the stratum value 86684f0b6dfSMatthew G. Knepley - points - The stratum points 86784f0b6dfSMatthew G. Knepley 86884f0b6dfSMatthew G. Knepley Level: intermediate 86984f0b6dfSMatthew G. Knepley 87084f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 87184f0b6dfSMatthew G. Knepley @*/ 8724de306b1SToby Isaac PetscErrorCode DMLabelSetStratumIS(DMLabel label, PetscInt value, IS is) 8734de306b1SToby Isaac { 8744de306b1SToby Isaac PetscInt v, numStrata; 8754de306b1SToby Isaac PetscErrorCode ierr; 8764de306b1SToby Isaac 8774de306b1SToby Isaac PetscFunctionBegin; 8784de306b1SToby Isaac numStrata = label->numStrata; 8794de306b1SToby Isaac for (v = 0; v < numStrata; v++) { 8804de306b1SToby Isaac if (label->stratumValues[v] == value) break; 8814de306b1SToby Isaac } 8824de306b1SToby Isaac if (v >= numStrata) {ierr = DMLabelAddStratum(label,value);CHKERRQ(ierr);} 8834de306b1SToby Isaac if (is == label->points[v]) PetscFunctionReturn(0); 8844de306b1SToby Isaac ierr = DMLabelClearStratum(label,value);CHKERRQ(ierr); 8854de306b1SToby Isaac ierr = ISGetLocalSize(is,&(label->stratumSizes[v]));CHKERRQ(ierr); 8864de306b1SToby Isaac label->stratumValues[v] = value; 8874de306b1SToby Isaac label->validIS[v] = PETSC_TRUE; 8884de306b1SToby Isaac ierr = PetscObjectReference((PetscObject)is);CHKERRQ(ierr); 8894de306b1SToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 8904de306b1SToby Isaac if (label->bt) { 8914de306b1SToby Isaac const PetscInt *points; 8924de306b1SToby Isaac PetscInt p; 8934de306b1SToby Isaac 8944de306b1SToby Isaac ierr = ISGetIndices(is,&points);CHKERRQ(ierr); 8954de306b1SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 8964de306b1SToby Isaac const PetscInt point = points[p]; 8974de306b1SToby Isaac 8984de306b1SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 8994de306b1SToby Isaac ierr = PetscBTSet(label->bt, point - label->pStart);CHKERRQ(ierr); 9004de306b1SToby Isaac } 9014de306b1SToby Isaac } 9024de306b1SToby Isaac label->points[v] = is; 9034de306b1SToby Isaac PetscFunctionReturn(0); 9044de306b1SToby Isaac } 9054de306b1SToby Isaac 90684f0b6dfSMatthew G. Knepley /*@ 90784f0b6dfSMatthew G. Knepley DMLabelClearStratum - Remove a stratum 9084de306b1SToby Isaac 90984f0b6dfSMatthew G. Knepley Input Parameters: 91084f0b6dfSMatthew G. Knepley + label - the DMLabel 91184f0b6dfSMatthew G. Knepley - value - the stratum value 91284f0b6dfSMatthew G. Knepley 91384f0b6dfSMatthew G. Knepley Level: intermediate 91484f0b6dfSMatthew G. Knepley 91584f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 91684f0b6dfSMatthew G. Knepley @*/ 917c58f1c22SToby Isaac PetscErrorCode DMLabelClearStratum(DMLabel label, PetscInt value) 918c58f1c22SToby Isaac { 919c58f1c22SToby Isaac PetscInt v; 920c58f1c22SToby Isaac PetscErrorCode ierr; 921c58f1c22SToby Isaac 922c58f1c22SToby Isaac PetscFunctionBegin; 923c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 924c58f1c22SToby Isaac if (label->stratumValues[v] == value) break; 925c58f1c22SToby Isaac } 926c58f1c22SToby Isaac if (v >= label->numStrata) PetscFunctionReturn(0); 9274de306b1SToby Isaac if (label->validIS[v]) { 9284de306b1SToby Isaac if (label->bt) { 929c58f1c22SToby Isaac PetscInt i; 930ad8374ffSToby Isaac const PetscInt *points; 931c58f1c22SToby Isaac 932ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v], &points);CHKERRQ(ierr); 933c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 934ad8374ffSToby Isaac const PetscInt point = points[i]; 935c58f1c22SToby Isaac 936c58f1c22SToby Isaac if ((point < label->pStart) || (point >= label->pEnd)) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [%D, %D)", point, label->pStart, label->pEnd); 937c58f1c22SToby Isaac ierr = PetscBTClear(label->bt, point - label->pStart);CHKERRQ(ierr); 938c58f1c22SToby Isaac } 939ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v], &points);CHKERRQ(ierr); 940c58f1c22SToby Isaac } 941ad8374ffSToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 942c58f1c22SToby Isaac label->stratumSizes[v] = 0; 943ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,0,NULL,PETSC_OWN_POINTER,&(label->points[v]));CHKERRQ(ierr); 944ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject) (label->points[v]), "indices");CHKERRQ(ierr); 945c58f1c22SToby Isaac } else { 946c58f1c22SToby Isaac PetscHashIClear(label->ht[v]); 947c58f1c22SToby Isaac } 948c58f1c22SToby Isaac PetscFunctionReturn(0); 949c58f1c22SToby Isaac } 950c58f1c22SToby Isaac 95184f0b6dfSMatthew G. Knepley /*@ 95284f0b6dfSMatthew G. Knepley DMLabelFilter - Remove all points outside of [start, end) 95384f0b6dfSMatthew G. Knepley 95484f0b6dfSMatthew G. Knepley Input Parameters: 95584f0b6dfSMatthew G. Knepley + label - the DMLabel 95684f0b6dfSMatthew G. Knepley . start - the first point 95784f0b6dfSMatthew G. Knepley - end - the last point 95884f0b6dfSMatthew G. Knepley 95984f0b6dfSMatthew G. Knepley Level: intermediate 96084f0b6dfSMatthew G. Knepley 96184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 96284f0b6dfSMatthew G. Knepley @*/ 963c58f1c22SToby Isaac PetscErrorCode DMLabelFilter(DMLabel label, PetscInt start, PetscInt end) 964c58f1c22SToby Isaac { 965c58f1c22SToby Isaac PetscInt v; 966c58f1c22SToby Isaac PetscErrorCode ierr; 967c58f1c22SToby Isaac 968c58f1c22SToby Isaac PetscFunctionBegin; 969c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 970c58f1c22SToby Isaac label->pStart = start; 971c58f1c22SToby Isaac label->pEnd = end; 972c58f1c22SToby Isaac if (label->bt) {ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr);} 973c58f1c22SToby Isaac /* Could squish offsets, but would only make sense if I reallocate the storage */ 974c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 975c58f1c22SToby Isaac PetscInt off, q; 976ad8374ffSToby Isaac const PetscInt *points; 977ad8374ffSToby Isaac PetscInt *pointsNew = NULL; 978c58f1c22SToby Isaac 979ad8374ffSToby Isaac ierr = ISGetIndices(label->points[v],&points);CHKERRQ(ierr); 980c58f1c22SToby Isaac for (off = 0, q = 0; q < label->stratumSizes[v]; ++q) { 981ad8374ffSToby Isaac const PetscInt point = points[q]; 982c58f1c22SToby Isaac 983ad8374ffSToby Isaac if ((point < start) || (point >= end)) { 984ad8374ffSToby Isaac if (!pointsNew) { 985ad8374ffSToby Isaac ierr = PetscMalloc1(label->stratumSizes[v],&pointsNew);CHKERRQ(ierr); 986ad8374ffSToby Isaac ierr = PetscMemcpy(pointsNew,points,(size_t) off * sizeof(PetscInt));CHKERRQ(ierr); 987ad8374ffSToby Isaac } 988ad8374ffSToby Isaac continue; 989ad8374ffSToby Isaac } 990ad8374ffSToby Isaac if (pointsNew) { 991ad8374ffSToby Isaac pointsNew[off++] = point; 992ad8374ffSToby Isaac } 993ad8374ffSToby Isaac } 994ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[v],&points);CHKERRQ(ierr); 995ad8374ffSToby Isaac if (pointsNew) { 996ad8374ffSToby Isaac ierr = ISDestroy(&(label->points[v]));CHKERRQ(ierr); 997ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,off,pointsNew,PETSC_OWN_POINTER,&(label->points[v]));CHKERRQ(ierr); 998ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject) (label->points[v]), "indices");CHKERRQ(ierr); 999c58f1c22SToby Isaac } 1000c58f1c22SToby Isaac label->stratumSizes[v] = off; 1001c58f1c22SToby Isaac } 1002c58f1c22SToby Isaac ierr = DMLabelCreateIndex(label, start, end);CHKERRQ(ierr); 1003c58f1c22SToby Isaac PetscFunctionReturn(0); 1004c58f1c22SToby Isaac } 1005c58f1c22SToby Isaac 100684f0b6dfSMatthew G. Knepley /*@ 100784f0b6dfSMatthew G. Knepley DMLabelPermute - Create a new label with permuted points 100884f0b6dfSMatthew G. Knepley 100984f0b6dfSMatthew G. Knepley Input Parameters: 101084f0b6dfSMatthew G. Knepley + label - the DMLabel 101184f0b6dfSMatthew G. Knepley - permutation - the point permutation 101284f0b6dfSMatthew G. Knepley 101384f0b6dfSMatthew G. Knepley Output Parameter: 101484f0b6dfSMatthew G. Knepley . labelnew - the new label containing the permuted points 101584f0b6dfSMatthew G. Knepley 101684f0b6dfSMatthew G. Knepley Level: intermediate 101784f0b6dfSMatthew G. Knepley 101884f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 101984f0b6dfSMatthew G. Knepley @*/ 1020c58f1c22SToby Isaac PetscErrorCode DMLabelPermute(DMLabel label, IS permutation, DMLabel *labelNew) 1021c58f1c22SToby Isaac { 1022c58f1c22SToby Isaac const PetscInt *perm; 1023c58f1c22SToby Isaac PetscInt numValues, numPoints, v, q; 1024c58f1c22SToby Isaac PetscErrorCode ierr; 1025c58f1c22SToby Isaac 1026c58f1c22SToby Isaac PetscFunctionBegin; 1027c58f1c22SToby Isaac ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr); 1028c58f1c22SToby Isaac ierr = DMLabelDuplicate(label, labelNew);CHKERRQ(ierr); 1029c58f1c22SToby Isaac ierr = DMLabelGetNumValues(*labelNew, &numValues);CHKERRQ(ierr); 1030c58f1c22SToby Isaac ierr = ISGetLocalSize(permutation, &numPoints);CHKERRQ(ierr); 1031c58f1c22SToby Isaac ierr = ISGetIndices(permutation, &perm);CHKERRQ(ierr); 1032c58f1c22SToby Isaac for (v = 0; v < numValues; ++v) { 1033c58f1c22SToby Isaac const PetscInt size = (*labelNew)->stratumSizes[v]; 1034ad8374ffSToby Isaac const PetscInt *points; 1035ad8374ffSToby Isaac PetscInt *pointsNew; 1036c58f1c22SToby Isaac 1037ad8374ffSToby Isaac ierr = ISGetIndices((*labelNew)->points[v],&points);CHKERRQ(ierr); 1038ad8374ffSToby Isaac ierr = PetscMalloc1(size,&pointsNew);CHKERRQ(ierr); 1039c58f1c22SToby Isaac for (q = 0; q < size; ++q) { 1040ad8374ffSToby Isaac const PetscInt point = points[q]; 1041c58f1c22SToby Isaac 1042c58f1c22SToby Isaac if ((point < 0) || (point >= numPoints)) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %D is not in [0, %D) for the remapping", point, numPoints); 1043ad8374ffSToby Isaac pointsNew[q] = perm[point]; 1044c58f1c22SToby Isaac } 1045ad8374ffSToby Isaac ierr = ISRestoreIndices((*labelNew)->points[v],&points);CHKERRQ(ierr); 1046ad8374ffSToby Isaac ierr = PetscSortInt(size, pointsNew);CHKERRQ(ierr); 1047ad8374ffSToby Isaac ierr = ISDestroy(&((*labelNew)->points[v]));CHKERRQ(ierr); 1048*fa8e8ae5SToby Isaac if (size > 0 && pointsNew[size - 1] == pointsNew[0] + size - 1) { 1049*fa8e8ae5SToby Isaac ierr = ISCreateStride(PETSC_COMM_SELF,size,pointsNew[0],1,&((*labelNew)->points[v]));CHKERRQ(ierr); 1050*fa8e8ae5SToby Isaac ierr = PetscFree(pointsNew);CHKERRQ(ierr); 1051*fa8e8ae5SToby Isaac } else { 1052ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,size,pointsNew,PETSC_OWN_POINTER,&((*labelNew)->points[v]));CHKERRQ(ierr); 1053*fa8e8ae5SToby Isaac } 1054ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject) ((*labelNew)->points[v]), "indices");CHKERRQ(ierr); 1055c58f1c22SToby Isaac } 1056c58f1c22SToby Isaac ierr = ISRestoreIndices(permutation, &perm);CHKERRQ(ierr); 1057c58f1c22SToby Isaac if (label->bt) { 1058c58f1c22SToby Isaac ierr = PetscBTDestroy(&label->bt);CHKERRQ(ierr); 1059c58f1c22SToby Isaac ierr = DMLabelCreateIndex(label, label->pStart, label->pEnd);CHKERRQ(ierr); 1060c58f1c22SToby Isaac } 1061c58f1c22SToby Isaac PetscFunctionReturn(0); 1062c58f1c22SToby Isaac } 1063c58f1c22SToby Isaac 106426c55118SMichael Lange PetscErrorCode DMLabelDistribute_Internal(DMLabel label, PetscSF sf, PetscSection *leafSection, PetscInt **leafStrata) 106526c55118SMichael Lange { 106626c55118SMichael Lange MPI_Comm comm; 106726c55118SMichael Lange PetscInt s, l, nroots, nleaves, dof, offset, size; 106826c55118SMichael Lange PetscInt *remoteOffsets, *rootStrata, *rootIdx; 106926c55118SMichael Lange PetscSection rootSection; 107026c55118SMichael Lange PetscSF labelSF; 107126c55118SMichael Lange PetscErrorCode ierr; 107226c55118SMichael Lange 107326c55118SMichael Lange PetscFunctionBegin; 107426c55118SMichael Lange if (label) {ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr);} 107526c55118SMichael Lange ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 107626c55118SMichael Lange /* Build a section of stratum values per point, generate the according SF 107726c55118SMichael Lange and distribute point-wise stratum values to leaves. */ 107826c55118SMichael Lange ierr = PetscSFGetGraph(sf, &nroots, &nleaves, NULL, NULL);CHKERRQ(ierr); 107926c55118SMichael Lange ierr = PetscSectionCreate(comm, &rootSection);CHKERRQ(ierr); 108026c55118SMichael Lange ierr = PetscSectionSetChart(rootSection, 0, nroots);CHKERRQ(ierr); 108126c55118SMichael Lange if (label) { 108226c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1083ad8374ffSToby Isaac const PetscInt *points; 1084ad8374ffSToby Isaac 1085ad8374ffSToby Isaac ierr = ISGetIndices(label->points[s], &points);CHKERRQ(ierr); 108626c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1087ad8374ffSToby Isaac ierr = PetscSectionGetDof(rootSection, points[l], &dof);CHKERRQ(ierr); 1088ad8374ffSToby Isaac ierr = PetscSectionSetDof(rootSection, points[l], dof+1);CHKERRQ(ierr); 108926c55118SMichael Lange } 1090ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[s], &points);CHKERRQ(ierr); 109126c55118SMichael Lange } 109226c55118SMichael Lange } 109326c55118SMichael Lange ierr = PetscSectionSetUp(rootSection);CHKERRQ(ierr); 109426c55118SMichael Lange /* Create a point-wise array of stratum values */ 109526c55118SMichael Lange ierr = PetscSectionGetStorageSize(rootSection, &size);CHKERRQ(ierr); 109626c55118SMichael Lange ierr = PetscMalloc1(size, &rootStrata);CHKERRQ(ierr); 109726c55118SMichael Lange ierr = PetscCalloc1(nroots, &rootIdx);CHKERRQ(ierr); 109826c55118SMichael Lange if (label) { 109926c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1100ad8374ffSToby Isaac const PetscInt *points; 1101ad8374ffSToby Isaac 1102ad8374ffSToby Isaac ierr = ISGetIndices(label->points[s], &points);CHKERRQ(ierr); 110326c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1104ad8374ffSToby Isaac const PetscInt p = points[l]; 110526c55118SMichael Lange ierr = PetscSectionGetOffset(rootSection, p, &offset);CHKERRQ(ierr); 110626c55118SMichael Lange rootStrata[offset+rootIdx[p]++] = label->stratumValues[s]; 110726c55118SMichael Lange } 1108ad8374ffSToby Isaac ierr = ISRestoreIndices(label->points[s], &points);CHKERRQ(ierr); 110926c55118SMichael Lange } 111026c55118SMichael Lange } 111126c55118SMichael Lange /* Build SF that maps label points to remote processes */ 111226c55118SMichael Lange ierr = PetscSectionCreate(comm, leafSection);CHKERRQ(ierr); 111326c55118SMichael Lange ierr = PetscSFDistributeSection(sf, rootSection, &remoteOffsets, *leafSection);CHKERRQ(ierr); 111426c55118SMichael Lange ierr = PetscSFCreateSectionSF(sf, rootSection, remoteOffsets, *leafSection, &labelSF);CHKERRQ(ierr); 111526c55118SMichael Lange ierr = PetscFree(remoteOffsets);CHKERRQ(ierr); 111626c55118SMichael Lange /* Send the strata for each point over the derived SF */ 111726c55118SMichael Lange ierr = PetscSectionGetStorageSize(*leafSection, &size);CHKERRQ(ierr); 111826c55118SMichael Lange ierr = PetscMalloc1(size, leafStrata);CHKERRQ(ierr); 111926c55118SMichael Lange ierr = PetscSFBcastBegin(labelSF, MPIU_INT, rootStrata, *leafStrata);CHKERRQ(ierr); 112026c55118SMichael Lange ierr = PetscSFBcastEnd(labelSF, MPIU_INT, rootStrata, *leafStrata);CHKERRQ(ierr); 112126c55118SMichael Lange /* Clean up */ 112226c55118SMichael Lange ierr = PetscFree(rootStrata);CHKERRQ(ierr); 112326c55118SMichael Lange ierr = PetscFree(rootIdx);CHKERRQ(ierr); 112426c55118SMichael Lange ierr = PetscSectionDestroy(&rootSection);CHKERRQ(ierr); 112526c55118SMichael Lange ierr = PetscSFDestroy(&labelSF);CHKERRQ(ierr); 112626c55118SMichael Lange PetscFunctionReturn(0); 112726c55118SMichael Lange } 112826c55118SMichael Lange 112984f0b6dfSMatthew G. Knepley /*@ 113084f0b6dfSMatthew G. Knepley DMLabelDistribute - Create a new label pushed forward over the PetscSF 113184f0b6dfSMatthew G. Knepley 113284f0b6dfSMatthew G. Knepley Input Parameters: 113384f0b6dfSMatthew G. Knepley + label - the DMLabel 113484f0b6dfSMatthew G. Knepley - sf - the map from old to new distribution 113584f0b6dfSMatthew G. Knepley 113684f0b6dfSMatthew G. Knepley Output Parameter: 113784f0b6dfSMatthew G. Knepley . labelnew - the new redistributed label 113884f0b6dfSMatthew G. Knepley 113984f0b6dfSMatthew G. Knepley Level: intermediate 114084f0b6dfSMatthew G. Knepley 114184f0b6dfSMatthew G. Knepley .seealso: DMLabelCreate(), DMLabelGetValue(), DMLabelSetValue(), DMLabelClearValue() 114284f0b6dfSMatthew G. Knepley @*/ 1143c58f1c22SToby Isaac PetscErrorCode DMLabelDistribute(DMLabel label, PetscSF sf, DMLabel *labelNew) 1144c58f1c22SToby Isaac { 1145c58f1c22SToby Isaac MPI_Comm comm; 114626c55118SMichael Lange PetscSection leafSection; 114726c55118SMichael Lange PetscInt p, pStart, pEnd, s, size, dof, offset, stratum; 114826c55118SMichael Lange PetscInt *leafStrata, *strataIdx; 1149ad8374ffSToby Isaac PetscInt **points; 1150c58f1c22SToby Isaac char *name; 1151c58f1c22SToby Isaac PetscInt nameSize; 11525cbdf6fcSMichael Lange PetscHashI stratumHash; 11535cbdf6fcSMichael Lange PETSC_UNUSED PetscHashIIter ret, iter; 1154c58f1c22SToby Isaac size_t len = 0; 115526c55118SMichael Lange PetscMPIInt rank; 1156c58f1c22SToby Isaac PetscErrorCode ierr; 1157c58f1c22SToby Isaac 1158c58f1c22SToby Isaac PetscFunctionBegin; 1159c58f1c22SToby Isaac if (label) {ierr = DMLabelMakeAllValid_Private(label);CHKERRQ(ierr);} 1160c58f1c22SToby Isaac ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 1161c58f1c22SToby Isaac ierr = MPI_Comm_rank(comm, &rank);CHKERRQ(ierr); 1162c58f1c22SToby Isaac /* Bcast name */ 1163c58f1c22SToby Isaac if (!rank) {ierr = PetscStrlen(label->name, &len);CHKERRQ(ierr);} 1164c58f1c22SToby Isaac nameSize = len; 1165c58f1c22SToby Isaac ierr = MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm);CHKERRQ(ierr); 1166c58f1c22SToby Isaac ierr = PetscMalloc1(nameSize+1, &name);CHKERRQ(ierr); 1167c58f1c22SToby Isaac if (!rank) {ierr = PetscMemcpy(name, label->name, nameSize+1);CHKERRQ(ierr);} 1168c58f1c22SToby Isaac ierr = MPI_Bcast(name, nameSize+1, MPI_CHAR, 0, comm);CHKERRQ(ierr); 1169c58f1c22SToby Isaac ierr = DMLabelCreate(name, labelNew);CHKERRQ(ierr); 1170c58f1c22SToby Isaac ierr = PetscFree(name);CHKERRQ(ierr); 117177d236dfSMichael Lange /* Bcast defaultValue */ 117277d236dfSMichael Lange if (!rank) (*labelNew)->defaultValue = label->defaultValue; 117377d236dfSMichael Lange ierr = MPI_Bcast(&(*labelNew)->defaultValue, 1, MPIU_INT, 0, comm);CHKERRQ(ierr); 117426c55118SMichael Lange /* Distribute stratum values over the SF and get the point mapping on the receiver */ 117526c55118SMichael Lange ierr = DMLabelDistribute_Internal(label, sf, &leafSection, &leafStrata);CHKERRQ(ierr); 11765cbdf6fcSMichael Lange /* Determine received stratum values and initialise new label*/ 11775cbdf6fcSMichael Lange PetscHashICreate(stratumHash); 117826c55118SMichael Lange ierr = PetscSectionGetStorageSize(leafSection, &size);CHKERRQ(ierr); 11795cbdf6fcSMichael Lange for (p = 0; p < size; ++p) PetscHashIPut(stratumHash, leafStrata[p], ret, iter); 11805cbdf6fcSMichael Lange PetscHashISize(stratumHash, (*labelNew)->numStrata); 1181ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->validIS);CHKERRQ(ierr); 1182ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) (*labelNew)->validIS[s] = PETSC_TRUE; 11835cbdf6fcSMichael Lange ierr = PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->stratumValues);CHKERRQ(ierr); 11845cbdf6fcSMichael Lange /* Turn leafStrata into indices rather than stratum values */ 11855cbdf6fcSMichael Lange offset = 0; 11865cbdf6fcSMichael Lange ierr = PetscHashIGetKeys(stratumHash, &offset, (*labelNew)->stratumValues);CHKERRQ(ierr); 1187a205f1fdSToby Isaac ierr = PetscSortInt((*labelNew)->numStrata,(*labelNew)->stratumValues);CHKERRQ(ierr); 11885cbdf6fcSMichael Lange for (p = 0; p < size; ++p) { 1189231b9e6fSMatthew G. Knepley for (s = 0; s < (*labelNew)->numStrata; ++s) { 1190231b9e6fSMatthew G. Knepley if (leafStrata[p] == (*labelNew)->stratumValues[s]) {leafStrata[p] = s; break;} 11915cbdf6fcSMichael Lange } 11925cbdf6fcSMichael Lange } 1193c58f1c22SToby Isaac /* Rebuild the point strata on the receiver */ 1194c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata,&(*labelNew)->stratumSizes);CHKERRQ(ierr); 1195c58f1c22SToby Isaac ierr = PetscSectionGetChart(leafSection, &pStart, &pEnd);CHKERRQ(ierr); 1196c58f1c22SToby Isaac for (p=pStart; p<pEnd; p++) { 1197c58f1c22SToby Isaac ierr = PetscSectionGetDof(leafSection, p, &dof);CHKERRQ(ierr); 1198c58f1c22SToby Isaac ierr = PetscSectionGetOffset(leafSection, p, &offset);CHKERRQ(ierr); 1199c58f1c22SToby Isaac for (s=0; s<dof; s++) { 1200c58f1c22SToby Isaac (*labelNew)->stratumSizes[leafStrata[offset+s]]++; 1201c58f1c22SToby Isaac } 1202c58f1c22SToby Isaac } 1203c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata,&(*labelNew)->ht);CHKERRQ(ierr); 1204c58f1c22SToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata,&(*labelNew)->points);CHKERRQ(ierr); 1205ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->numStrata,&points);CHKERRQ(ierr); 1206c58f1c22SToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) { 1207c58f1c22SToby Isaac PetscHashICreate((*labelNew)->ht[s]); 1208ad8374ffSToby Isaac ierr = PetscMalloc1((*labelNew)->stratumSizes[s], &(points[s]));CHKERRQ(ierr); 1209c58f1c22SToby Isaac } 1210c58f1c22SToby Isaac /* Insert points into new strata */ 1211c58f1c22SToby Isaac ierr = PetscCalloc1((*labelNew)->numStrata, &strataIdx);CHKERRQ(ierr); 1212c58f1c22SToby Isaac ierr = PetscSectionGetChart(leafSection, &pStart, &pEnd);CHKERRQ(ierr); 1213c58f1c22SToby Isaac for (p=pStart; p<pEnd; p++) { 1214c58f1c22SToby Isaac ierr = PetscSectionGetDof(leafSection, p, &dof);CHKERRQ(ierr); 1215c58f1c22SToby Isaac ierr = PetscSectionGetOffset(leafSection, p, &offset);CHKERRQ(ierr); 1216c58f1c22SToby Isaac for (s=0; s<dof; s++) { 1217c58f1c22SToby Isaac stratum = leafStrata[offset+s]; 1218ad8374ffSToby Isaac points[stratum][strataIdx[stratum]++] = p; 1219c58f1c22SToby Isaac } 1220c58f1c22SToby Isaac } 1221ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; s++) { 1222ad8374ffSToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF,(*labelNew)->stratumSizes[s],&(points[s][0]),PETSC_OWN_POINTER,&((*labelNew)->points[s]));CHKERRQ(ierr); 1223ad8374ffSToby Isaac ierr = PetscObjectSetName((PetscObject)((*labelNew)->points[s]),"indices");CHKERRQ(ierr); 1224ad8374ffSToby Isaac } 1225ad8374ffSToby Isaac ierr = PetscFree(points);CHKERRQ(ierr); 12265cbdf6fcSMichael Lange PetscHashIDestroy(stratumHash); 1227c58f1c22SToby Isaac ierr = PetscFree(leafStrata);CHKERRQ(ierr); 1228c58f1c22SToby Isaac ierr = PetscFree(strataIdx);CHKERRQ(ierr); 1229c58f1c22SToby Isaac ierr = PetscSectionDestroy(&leafSection);CHKERRQ(ierr); 1230c58f1c22SToby Isaac PetscFunctionReturn(0); 1231c58f1c22SToby Isaac } 1232c58f1c22SToby Isaac 12337937d9ceSMichael Lange /*@ 12347937d9ceSMichael Lange DMLabelGather - Gather all label values from leafs into roots 12357937d9ceSMichael Lange 12367937d9ceSMichael Lange Input Parameters: 12377937d9ceSMichael Lange + label - the DMLabel 123884f0b6dfSMatthew G. Knepley - sf - the Star Forest point communication map 12397937d9ceSMichael Lange 124084f0b6dfSMatthew G. Knepley Output Parameters: 124184f0b6dfSMatthew G. Knepley . labelNew - the new DMLabel with localised leaf values 12427937d9ceSMichael Lange 12437937d9ceSMichael Lange Level: developer 12447937d9ceSMichael Lange 12457937d9ceSMichael Lange Note: This is the inverse operation to DMLabelDistribute. 12467937d9ceSMichael Lange 12477937d9ceSMichael Lange .seealso: DMLabelDistribute() 12487937d9ceSMichael Lange @*/ 12497937d9ceSMichael Lange PetscErrorCode DMLabelGather(DMLabel label, PetscSF sf, DMLabel *labelNew) 12507937d9ceSMichael Lange { 12517937d9ceSMichael Lange MPI_Comm comm; 12527937d9ceSMichael Lange PetscSection rootSection; 12537937d9ceSMichael Lange PetscSF sfLabel; 12547937d9ceSMichael Lange PetscSFNode *rootPoints, *leafPoints; 12557937d9ceSMichael Lange PetscInt p, s, d, nroots, nleaves, nmultiroots, idx, dof, offset; 12567937d9ceSMichael Lange const PetscInt *rootDegree, *ilocal; 12577937d9ceSMichael Lange PetscInt *rootStrata; 12587937d9ceSMichael Lange char *name; 12597937d9ceSMichael Lange PetscInt nameSize; 12607937d9ceSMichael Lange size_t len = 0; 12619852e123SBarry Smith PetscMPIInt rank, size; 12627937d9ceSMichael Lange PetscErrorCode ierr; 12637937d9ceSMichael Lange 12647937d9ceSMichael Lange PetscFunctionBegin; 12657937d9ceSMichael Lange ierr = PetscObjectGetComm((PetscObject)sf, &comm);CHKERRQ(ierr); 12667937d9ceSMichael Lange ierr = MPI_Comm_rank(comm, &rank);CHKERRQ(ierr); 12679852e123SBarry Smith ierr = MPI_Comm_size(comm, &size);CHKERRQ(ierr); 12687937d9ceSMichael Lange /* Bcast name */ 12697937d9ceSMichael Lange if (!rank) {ierr = PetscStrlen(label->name, &len);CHKERRQ(ierr);} 12707937d9ceSMichael Lange nameSize = len; 12717937d9ceSMichael Lange ierr = MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm);CHKERRQ(ierr); 12727937d9ceSMichael Lange ierr = PetscMalloc1(nameSize+1, &name);CHKERRQ(ierr); 12737937d9ceSMichael Lange if (!rank) {ierr = PetscMemcpy(name, label->name, nameSize+1);CHKERRQ(ierr);} 12747937d9ceSMichael Lange ierr = MPI_Bcast(name, nameSize+1, MPI_CHAR, 0, comm);CHKERRQ(ierr); 12757937d9ceSMichael Lange ierr = DMLabelCreate(name, labelNew);CHKERRQ(ierr); 12767937d9ceSMichael Lange ierr = PetscFree(name);CHKERRQ(ierr); 12777937d9ceSMichael Lange /* Gather rank/index pairs of leaves into local roots to build 12787937d9ceSMichael Lange an inverse, multi-rooted SF. Note that this ignores local leaf 12797937d9ceSMichael Lange indexing due to the use of the multiSF in PetscSFGather. */ 12807937d9ceSMichael Lange ierr = PetscSFGetGraph(sf, &nroots, &nleaves, &ilocal, NULL);CHKERRQ(ierr); 1281dc53bc9bSMatthew G. Knepley ierr = PetscMalloc1(nroots, &leafPoints);CHKERRQ(ierr); 1282dc53bc9bSMatthew G. Knepley for (p = 0; p < nroots; ++p) leafPoints[p].rank = leafPoints[p].index = -1; 12837937d9ceSMichael Lange for (p = 0; p < nleaves; p++) { 1284dc53bc9bSMatthew G. Knepley leafPoints[ilocal[p]].index = ilocal[p]; 1285dc53bc9bSMatthew G. Knepley leafPoints[ilocal[p]].rank = rank; 12867937d9ceSMichael Lange } 12877937d9ceSMichael Lange ierr = PetscSFComputeDegreeBegin(sf, &rootDegree);CHKERRQ(ierr); 12887937d9ceSMichael Lange ierr = PetscSFComputeDegreeEnd(sf, &rootDegree);CHKERRQ(ierr); 12897937d9ceSMichael Lange for (p = 0, nmultiroots = 0; p < nroots; ++p) nmultiroots += rootDegree[p]; 12907937d9ceSMichael Lange ierr = PetscMalloc1(nmultiroots, &rootPoints);CHKERRQ(ierr); 12917937d9ceSMichael Lange ierr = PetscSFGatherBegin(sf, MPIU_2INT, leafPoints, rootPoints);CHKERRQ(ierr); 12927937d9ceSMichael Lange ierr = PetscSFGatherEnd(sf, MPIU_2INT, leafPoints, rootPoints);CHKERRQ(ierr); 12937937d9ceSMichael Lange ierr = PetscSFCreate(comm,& sfLabel);CHKERRQ(ierr); 12947937d9ceSMichael Lange ierr = PetscSFSetGraph(sfLabel, nroots, nmultiroots, NULL, PETSC_OWN_POINTER, rootPoints, PETSC_OWN_POINTER);CHKERRQ(ierr); 12957937d9ceSMichael Lange /* Migrate label over inverted SF to pull stratum values at leaves into roots. */ 12967937d9ceSMichael Lange ierr = DMLabelDistribute_Internal(label, sfLabel, &rootSection, &rootStrata);CHKERRQ(ierr); 12977937d9ceSMichael Lange /* Rebuild the point strata on the receiver */ 12987937d9ceSMichael Lange for (p = 0, idx = 0; p < nroots; p++) { 12997937d9ceSMichael Lange for (d = 0; d < rootDegree[p]; d++) { 13007937d9ceSMichael Lange ierr = PetscSectionGetDof(rootSection, idx+d, &dof);CHKERRQ(ierr); 13017937d9ceSMichael Lange ierr = PetscSectionGetOffset(rootSection, idx+d, &offset);CHKERRQ(ierr); 13027937d9ceSMichael Lange for (s = 0; s < dof; s++) {ierr = DMLabelSetValue(*labelNew, p, rootStrata[offset+s]);CHKERRQ(ierr);} 13037937d9ceSMichael Lange } 13047937d9ceSMichael Lange idx += rootDegree[p]; 13057937d9ceSMichael Lange } 130677e0c0e7SMichael Lange ierr = PetscFree(leafPoints);CHKERRQ(ierr); 130777e0c0e7SMichael Lange ierr = PetscFree(rootStrata);CHKERRQ(ierr); 130877e0c0e7SMichael Lange ierr = PetscSectionDestroy(&rootSection);CHKERRQ(ierr); 130977e0c0e7SMichael Lange ierr = PetscSFDestroy(&sfLabel);CHKERRQ(ierr); 13107937d9ceSMichael Lange PetscFunctionReturn(0); 13117937d9ceSMichael Lange } 13127937d9ceSMichael Lange 131384f0b6dfSMatthew G. Knepley /*@ 131484f0b6dfSMatthew G. Knepley DMLabelConvertToSection - Make a PetscSection/IS pair that encodes the label 131584f0b6dfSMatthew G. Knepley 131684f0b6dfSMatthew G. Knepley Input Parameter: 131784f0b6dfSMatthew G. Knepley . label - the DMLabel 131884f0b6dfSMatthew G. Knepley 131984f0b6dfSMatthew G. Knepley Output Parameters: 132084f0b6dfSMatthew G. Knepley + section - the section giving offsets for each stratum 132184f0b6dfSMatthew G. Knepley - is - An IS containing all the label points 132284f0b6dfSMatthew G. Knepley 132384f0b6dfSMatthew G. Knepley Level: developer 132484f0b6dfSMatthew G. Knepley 132584f0b6dfSMatthew G. Knepley .seealso: DMLabelDistribute() 132684f0b6dfSMatthew G. Knepley @*/ 1327c58f1c22SToby Isaac PetscErrorCode DMLabelConvertToSection(DMLabel label, PetscSection *section, IS *is) 1328c58f1c22SToby Isaac { 1329c58f1c22SToby Isaac IS vIS; 1330c58f1c22SToby Isaac const PetscInt *values; 1331c58f1c22SToby Isaac PetscInt *points; 1332c58f1c22SToby Isaac PetscInt nV, vS = 0, vE = 0, v, N; 1333c58f1c22SToby Isaac PetscErrorCode ierr; 1334c58f1c22SToby Isaac 1335c58f1c22SToby Isaac PetscFunctionBegin; 1336c58f1c22SToby Isaac ierr = DMLabelGetNumValues(label, &nV);CHKERRQ(ierr); 1337c58f1c22SToby Isaac ierr = DMLabelGetValueIS(label, &vIS);CHKERRQ(ierr); 1338c58f1c22SToby Isaac ierr = ISGetIndices(vIS, &values);CHKERRQ(ierr); 1339c58f1c22SToby Isaac if (nV) {vS = values[0]; vE = values[0]+1;} 1340c58f1c22SToby Isaac for (v = 1; v < nV; ++v) { 1341c58f1c22SToby Isaac vS = PetscMin(vS, values[v]); 1342c58f1c22SToby Isaac vE = PetscMax(vE, values[v]+1); 1343c58f1c22SToby Isaac } 1344c58f1c22SToby Isaac ierr = PetscSectionCreate(PETSC_COMM_SELF, section);CHKERRQ(ierr); 1345c58f1c22SToby Isaac ierr = PetscSectionSetChart(*section, vS, vE);CHKERRQ(ierr); 1346c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 1347c58f1c22SToby Isaac PetscInt n; 1348c58f1c22SToby Isaac 1349c58f1c22SToby Isaac ierr = DMLabelGetStratumSize(label, values[v], &n);CHKERRQ(ierr); 1350c58f1c22SToby Isaac ierr = PetscSectionSetDof(*section, values[v], n);CHKERRQ(ierr); 1351c58f1c22SToby Isaac } 1352c58f1c22SToby Isaac ierr = PetscSectionSetUp(*section);CHKERRQ(ierr); 1353c58f1c22SToby Isaac ierr = PetscSectionGetStorageSize(*section, &N);CHKERRQ(ierr); 1354c58f1c22SToby Isaac ierr = PetscMalloc1(N, &points);CHKERRQ(ierr); 1355c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 1356c58f1c22SToby Isaac IS is; 1357c58f1c22SToby Isaac const PetscInt *spoints; 1358c58f1c22SToby Isaac PetscInt dof, off, p; 1359c58f1c22SToby Isaac 1360c58f1c22SToby Isaac ierr = PetscSectionGetDof(*section, values[v], &dof);CHKERRQ(ierr); 1361c58f1c22SToby Isaac ierr = PetscSectionGetOffset(*section, values[v], &off);CHKERRQ(ierr); 1362c58f1c22SToby Isaac ierr = DMLabelGetStratumIS(label, values[v], &is);CHKERRQ(ierr); 1363c58f1c22SToby Isaac ierr = ISGetIndices(is, &spoints);CHKERRQ(ierr); 1364c58f1c22SToby Isaac for (p = 0; p < dof; ++p) points[off+p] = spoints[p]; 1365c58f1c22SToby Isaac ierr = ISRestoreIndices(is, &spoints);CHKERRQ(ierr); 1366c58f1c22SToby Isaac ierr = ISDestroy(&is);CHKERRQ(ierr); 1367c58f1c22SToby Isaac } 1368c58f1c22SToby Isaac ierr = ISRestoreIndices(vIS, &values);CHKERRQ(ierr); 1369c58f1c22SToby Isaac ierr = ISDestroy(&vIS);CHKERRQ(ierr); 1370c58f1c22SToby Isaac ierr = ISCreateGeneral(PETSC_COMM_SELF, N, points, PETSC_OWN_POINTER, is);CHKERRQ(ierr); 1371c58f1c22SToby Isaac PetscFunctionReturn(0); 1372c58f1c22SToby Isaac } 1373c58f1c22SToby Isaac 137484f0b6dfSMatthew G. Knepley /*@ 1375c58f1c22SToby Isaac PetscSectionCreateGlobalSectionLabel - Create a section describing the global field layout using 1376c58f1c22SToby Isaac the local section and an SF describing the section point overlap. 1377c58f1c22SToby Isaac 1378c58f1c22SToby Isaac Input Parameters: 1379c58f1c22SToby Isaac + s - The PetscSection for the local field layout 1380c58f1c22SToby Isaac . sf - The SF describing parallel layout of the section points 1381c58f1c22SToby Isaac . includeConstraints - By default this is PETSC_FALSE, meaning that the global field vector will not possess constrained dofs 1382c58f1c22SToby Isaac . label - The label specifying the points 1383c58f1c22SToby Isaac - labelValue - The label stratum specifying the points 1384c58f1c22SToby Isaac 1385c58f1c22SToby Isaac Output Parameter: 1386c58f1c22SToby Isaac . gsection - The PetscSection for the global field layout 1387c58f1c22SToby Isaac 1388c58f1c22SToby Isaac Note: This gives negative sizes and offsets to points not owned by this process 1389c58f1c22SToby Isaac 1390c58f1c22SToby Isaac Level: developer 1391c58f1c22SToby Isaac 1392c58f1c22SToby Isaac .seealso: PetscSectionCreate() 1393c58f1c22SToby Isaac @*/ 1394c58f1c22SToby Isaac PetscErrorCode PetscSectionCreateGlobalSectionLabel(PetscSection s, PetscSF sf, PetscBool includeConstraints, DMLabel label, PetscInt labelValue, PetscSection *gsection) 1395c58f1c22SToby Isaac { 1396c58f1c22SToby Isaac PetscInt *neg = NULL, *tmpOff = NULL; 1397c58f1c22SToby Isaac PetscInt pStart, pEnd, p, dof, cdof, off, globalOff = 0, nroots; 1398c58f1c22SToby Isaac PetscErrorCode ierr; 1399c58f1c22SToby Isaac 1400c58f1c22SToby Isaac PetscFunctionBegin; 1401c58f1c22SToby Isaac ierr = PetscSectionCreate(PetscObjectComm((PetscObject) s), gsection);CHKERRQ(ierr); 1402c58f1c22SToby Isaac ierr = PetscSectionGetChart(s, &pStart, &pEnd);CHKERRQ(ierr); 1403c58f1c22SToby Isaac ierr = PetscSectionSetChart(*gsection, pStart, pEnd);CHKERRQ(ierr); 1404c58f1c22SToby Isaac ierr = PetscSFGetGraph(sf, &nroots, NULL, NULL, NULL);CHKERRQ(ierr); 1405c58f1c22SToby Isaac if (nroots >= 0) { 1406c58f1c22SToby Isaac if (nroots < pEnd-pStart) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "PetscSF nroots %d < %d section size", nroots, pEnd-pStart); 1407c58f1c22SToby Isaac ierr = PetscCalloc1(nroots, &neg);CHKERRQ(ierr); 1408c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1409c58f1c22SToby Isaac ierr = PetscCalloc1(nroots, &tmpOff);CHKERRQ(ierr); 1410c58f1c22SToby Isaac } else { 1411c58f1c22SToby Isaac tmpOff = &(*gsection)->atlasDof[-pStart]; 1412c58f1c22SToby Isaac } 1413c58f1c22SToby Isaac } 1414c58f1c22SToby Isaac /* Mark ghost points with negative dof */ 1415c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) { 1416c58f1c22SToby Isaac PetscInt value; 1417c58f1c22SToby Isaac 1418c58f1c22SToby Isaac ierr = DMLabelGetValue(label, p, &value);CHKERRQ(ierr); 1419c58f1c22SToby Isaac if (value != labelValue) continue; 1420c58f1c22SToby Isaac ierr = PetscSectionGetDof(s, p, &dof);CHKERRQ(ierr); 1421c58f1c22SToby Isaac ierr = PetscSectionSetDof(*gsection, p, dof);CHKERRQ(ierr); 1422c58f1c22SToby Isaac ierr = PetscSectionGetConstraintDof(s, p, &cdof);CHKERRQ(ierr); 1423c58f1c22SToby Isaac if (!includeConstraints && cdof > 0) {ierr = PetscSectionSetConstraintDof(*gsection, p, cdof);CHKERRQ(ierr);} 1424c58f1c22SToby Isaac if (neg) neg[p] = -(dof+1); 1425c58f1c22SToby Isaac } 1426c58f1c22SToby Isaac ierr = PetscSectionSetUpBC(*gsection);CHKERRQ(ierr); 1427c58f1c22SToby Isaac if (nroots >= 0) { 1428c58f1c22SToby Isaac ierr = PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff);CHKERRQ(ierr); 1429c58f1c22SToby Isaac ierr = PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff);CHKERRQ(ierr); 1430c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1431c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) {if (tmpOff[p] < 0) (*gsection)->atlasDof[p-pStart] = tmpOff[p];} 1432c58f1c22SToby Isaac } 1433c58f1c22SToby Isaac } 1434c58f1c22SToby Isaac /* Calculate new sizes, get proccess offset, and calculate point offsets */ 1435c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd-pStart; ++p) { 1436c58f1c22SToby Isaac cdof = (!includeConstraints && s->bc) ? s->bc->atlasDof[p] : 0; 1437c58f1c22SToby Isaac (*gsection)->atlasOff[p] = off; 1438c58f1c22SToby Isaac off += (*gsection)->atlasDof[p] > 0 ? (*gsection)->atlasDof[p]-cdof : 0; 1439c58f1c22SToby Isaac } 1440c58f1c22SToby Isaac ierr = MPI_Scan(&off, &globalOff, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject) s));CHKERRQ(ierr); 1441c58f1c22SToby Isaac globalOff -= off; 1442c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd-pStart; ++p) { 1443c58f1c22SToby Isaac (*gsection)->atlasOff[p] += globalOff; 1444c58f1c22SToby Isaac if (neg) neg[p] = -((*gsection)->atlasOff[p]+1); 1445c58f1c22SToby Isaac } 1446c58f1c22SToby Isaac /* Put in negative offsets for ghost points */ 1447c58f1c22SToby Isaac if (nroots >= 0) { 1448c58f1c22SToby Isaac ierr = PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff);CHKERRQ(ierr); 1449c58f1c22SToby Isaac ierr = PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff);CHKERRQ(ierr); 1450c58f1c22SToby Isaac if (nroots > pEnd-pStart) { 1451c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) {if (tmpOff[p] < 0) (*gsection)->atlasOff[p-pStart] = tmpOff[p];} 1452c58f1c22SToby Isaac } 1453c58f1c22SToby Isaac } 1454c58f1c22SToby Isaac if (nroots >= 0 && nroots > pEnd-pStart) {ierr = PetscFree(tmpOff);CHKERRQ(ierr);} 1455c58f1c22SToby Isaac ierr = PetscFree(neg);CHKERRQ(ierr); 1456c58f1c22SToby Isaac PetscFunctionReturn(0); 1457c58f1c22SToby Isaac } 1458c58f1c22SToby Isaac 14595fdea053SToby Isaac typedef struct _n_PetscSectionSym_Label 14605fdea053SToby Isaac { 14615fdea053SToby Isaac DMLabel label; 14625fdea053SToby Isaac PetscCopyMode *modes; 14635fdea053SToby Isaac PetscInt *sizes; 14645fdea053SToby Isaac const PetscInt ***perms; 14655fdea053SToby Isaac const PetscScalar ***rots; 14665fdea053SToby Isaac PetscInt (*minMaxOrients)[2]; 14675fdea053SToby Isaac PetscInt numStrata; /* numStrata is only increasing, functions as a state */ 14685fdea053SToby Isaac } PetscSectionSym_Label; 14695fdea053SToby Isaac 14705fdea053SToby Isaac static PetscErrorCode PetscSectionSymLabelReset(PetscSectionSym sym) 14715fdea053SToby Isaac { 14725fdea053SToby Isaac PetscInt i, j; 14735fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *) sym->data; 14745fdea053SToby Isaac PetscErrorCode ierr; 14755fdea053SToby Isaac 14765fdea053SToby Isaac PetscFunctionBegin; 14775fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 14785fdea053SToby Isaac if (sl->modes[i] == PETSC_OWN_POINTER || sl->modes[i] == PETSC_COPY_VALUES) { 14795fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 14805fdea053SToby Isaac if (sl->perms[i]) {ierr = PetscFree(sl->perms[i][j]);CHKERRQ(ierr);} 14815fdea053SToby Isaac if (sl->rots[i]) {ierr = PetscFree(sl->rots[i][j]);CHKERRQ(ierr);} 14825fdea053SToby Isaac } 14835fdea053SToby Isaac if (sl->perms[i]) { 14845fdea053SToby Isaac const PetscInt **perms = &sl->perms[i][sl->minMaxOrients[i][0]]; 14855fdea053SToby Isaac 14865fdea053SToby Isaac ierr = PetscFree(perms);CHKERRQ(ierr); 14875fdea053SToby Isaac } 14885fdea053SToby Isaac if (sl->rots[i]) { 14895fdea053SToby Isaac const PetscScalar **rots = &sl->rots[i][sl->minMaxOrients[i][0]]; 14905fdea053SToby Isaac 14915fdea053SToby Isaac ierr = PetscFree(rots);CHKERRQ(ierr); 14925fdea053SToby Isaac } 14935fdea053SToby Isaac } 14945fdea053SToby Isaac } 14955fdea053SToby Isaac ierr = PetscFree5(sl->modes,sl->sizes,sl->perms,sl->rots,sl->minMaxOrients);CHKERRQ(ierr); 14965fdea053SToby Isaac ierr = DMLabelDestroy(&sl->label);CHKERRQ(ierr); 14975fdea053SToby Isaac sl->numStrata = 0; 14985fdea053SToby Isaac PetscFunctionReturn(0); 14995fdea053SToby Isaac } 15005fdea053SToby Isaac 15015fdea053SToby Isaac static PetscErrorCode PetscSectionSymDestroy_Label(PetscSectionSym sym) 15025fdea053SToby Isaac { 15035fdea053SToby Isaac PetscErrorCode ierr; 15045fdea053SToby Isaac 15055fdea053SToby Isaac PetscFunctionBegin; 15065fdea053SToby Isaac ierr = PetscSectionSymLabelReset(sym);CHKERRQ(ierr); 15075fdea053SToby Isaac ierr = PetscFree(sym->data);CHKERRQ(ierr); 15085fdea053SToby Isaac PetscFunctionReturn(0); 15095fdea053SToby Isaac } 15105fdea053SToby Isaac 15115fdea053SToby Isaac static PetscErrorCode PetscSectionSymView_Label(PetscSectionSym sym, PetscViewer viewer) 15125fdea053SToby Isaac { 15135fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *) sym->data; 15145fdea053SToby Isaac PetscBool isAscii; 15155fdea053SToby Isaac DMLabel label = sl->label; 15165fdea053SToby Isaac PetscErrorCode ierr; 15175fdea053SToby Isaac 15185fdea053SToby Isaac PetscFunctionBegin; 15195fdea053SToby Isaac ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &isAscii);CHKERRQ(ierr); 15205fdea053SToby Isaac if (isAscii) { 15215fdea053SToby Isaac PetscInt i, j, k; 15225fdea053SToby Isaac PetscViewerFormat format; 15235fdea053SToby Isaac 15245fdea053SToby Isaac ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 15255fdea053SToby Isaac if (label) { 15265fdea053SToby Isaac ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 15275fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 15285fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 15295fdea053SToby Isaac ierr = DMLabelView(label, viewer);CHKERRQ(ierr); 15305fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 15315fdea053SToby Isaac } else { 15325fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer," Label '%s'\n",sl->label->name);CHKERRQ(ierr); 15335fdea053SToby Isaac } 15345fdea053SToby Isaac } else { 15355fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "No label given\n");CHKERRQ(ierr); 15365fdea053SToby Isaac } 15375fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 15385fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 15395fdea053SToby Isaac PetscInt value = i < sl->numStrata ? label->stratumValues[i] : label->defaultValue; 15405fdea053SToby Isaac 15415fdea053SToby Isaac if (!(sl->perms[i] || sl->rots[i])) { 15425fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %D (%D dofs per point): no symmetries\n", value, sl->sizes[i]);CHKERRQ(ierr); 15435fdea053SToby Isaac } else { 15445fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %D (%D dofs per point):\n", value, sl->sizes[i]);CHKERRQ(ierr); 15455fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 15465fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation range: [%D, %D)\n", sl->minMaxOrients[i][0], sl->minMaxOrients[i][1]);CHKERRQ(ierr); 15475fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 15485fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 15495fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 15505fdea053SToby Isaac if (!((sl->perms[i] && sl->perms[i][j]) || (sl->rots[i] && sl->rots[i][j]))) { 15515fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation %D: identity\n",j);CHKERRQ(ierr); 15525fdea053SToby Isaac } else { 15535fdea053SToby Isaac PetscInt tab; 15545fdea053SToby Isaac 15555fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer, "Orientation %D:\n",j);CHKERRQ(ierr); 15565fdea053SToby Isaac ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 15575fdea053SToby Isaac ierr = PetscViewerASCIIGetTab(viewer,&tab);CHKERRQ(ierr); 15585fdea053SToby Isaac if (sl->perms[i] && sl->perms[i][j]) { 15595fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"Permutation:");CHKERRQ(ierr); 15605fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,0);CHKERRQ(ierr); 15615fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %D",sl->perms[i][j][k]);CHKERRQ(ierr);} 15625fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"\n");CHKERRQ(ierr); 15635fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,tab);CHKERRQ(ierr); 15645fdea053SToby Isaac } 15655fdea053SToby Isaac if (sl->rots[i] && sl->rots[i][j]) { 15665fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"Rotations: ");CHKERRQ(ierr); 15675fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,0);CHKERRQ(ierr); 15685fdea053SToby Isaac #if defined(PETSC_USE_COMPLEX) 15695fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %+f+i*%+f",PetscRealPart(sl->rots[i][j][k]),PetscImaginaryPart(sl->rots[i][j][k]));CHKERRQ(ierr);} 15705fdea053SToby Isaac #else 15715fdea053SToby Isaac for (k = 0; k < sl->sizes[i]; k++) {ierr = PetscViewerASCIIPrintf(viewer," %+f",sl->rots[i][j][k]);CHKERRQ(ierr);} 15725fdea053SToby Isaac #endif 15735fdea053SToby Isaac ierr = PetscViewerASCIIPrintf(viewer,"\n");CHKERRQ(ierr); 15745fdea053SToby Isaac ierr = PetscViewerASCIISetTab(viewer,tab);CHKERRQ(ierr); 15755fdea053SToby Isaac } 15765fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 15775fdea053SToby Isaac } 15785fdea053SToby Isaac } 15795fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 15805fdea053SToby Isaac } 15815fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 15825fdea053SToby Isaac } 15835fdea053SToby Isaac } 15845fdea053SToby Isaac ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 15855fdea053SToby Isaac } 15865fdea053SToby Isaac PetscFunctionReturn(0); 15875fdea053SToby Isaac } 15885fdea053SToby Isaac 15895fdea053SToby Isaac /*@ 15905fdea053SToby Isaac PetscSectionSymLabelSetLabel - set the label whose strata will define the points that receive symmetries 15915fdea053SToby Isaac 15925fdea053SToby Isaac Logically collective on sym 15935fdea053SToby Isaac 15945fdea053SToby Isaac Input parameters: 15955fdea053SToby Isaac + sym - the section symmetries 15965fdea053SToby Isaac - label - the DMLabel describing the types of points 15975fdea053SToby Isaac 15985fdea053SToby Isaac Level: developer: 15995fdea053SToby Isaac 16005fdea053SToby Isaac .seealso: PetscSectionSymLabelSetStratum(), PetscSectionSymCreateLabel(), PetscSectionGetPointSyms() 16015fdea053SToby Isaac @*/ 16025fdea053SToby Isaac PetscErrorCode PetscSectionSymLabelSetLabel(PetscSectionSym sym, DMLabel label) 16035fdea053SToby Isaac { 16045fdea053SToby Isaac PetscSectionSym_Label *sl; 16055fdea053SToby Isaac PetscErrorCode ierr; 16065fdea053SToby Isaac 16075fdea053SToby Isaac PetscFunctionBegin; 16085fdea053SToby Isaac PetscValidHeaderSpecific(sym,PETSC_SECTION_SYM_CLASSID,1); 16095fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 16105fdea053SToby Isaac if (sl->label && sl->label != label) {ierr = PetscSectionSymLabelReset(sym);CHKERRQ(ierr);} 16115fdea053SToby Isaac if (label) { 16125fdea053SToby Isaac label->refct++; 16135fdea053SToby Isaac sl->label = label; 16145fdea053SToby Isaac ierr = DMLabelGetNumValues(label,&sl->numStrata);CHKERRQ(ierr); 16151a834cf9SToby Isaac ierr = PetscMalloc5(sl->numStrata+1,&sl->modes,sl->numStrata+1,&sl->sizes,sl->numStrata+1,&sl->perms,sl->numStrata+1,&sl->rots,sl->numStrata+1,&sl->minMaxOrients);CHKERRQ(ierr); 16161a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->modes,(sl->numStrata+1)*sizeof(PetscCopyMode));CHKERRQ(ierr); 16171a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->sizes,(sl->numStrata+1)*sizeof(PetscInt));CHKERRQ(ierr); 16181a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->perms,(sl->numStrata+1)*sizeof(const PetscInt **));CHKERRQ(ierr); 16191a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->rots,(sl->numStrata+1)*sizeof(const PetscScalar **));CHKERRQ(ierr); 16201a834cf9SToby Isaac ierr = PetscMemzero((void *) sl->minMaxOrients,(sl->numStrata+1)*sizeof(PetscInt[2]));CHKERRQ(ierr); 16215fdea053SToby Isaac } 16225fdea053SToby Isaac PetscFunctionReturn(0); 16235fdea053SToby Isaac } 16245fdea053SToby Isaac 16255fdea053SToby Isaac /*@C 16265fdea053SToby Isaac PetscSectionSymLabelSetStratum - set the symmetries for the orientations of a stratum 16275fdea053SToby Isaac 16285fdea053SToby Isaac Logically collective on PetscSectionSym 16295fdea053SToby Isaac 16305fdea053SToby Isaac InputParameters: 16315fdea053SToby Isaac + sys - the section symmetries 16325fdea053SToby Isaac . stratum - the stratum value in the label that we are assigning symmetries for 16335fdea053SToby Isaac . size - the number of dofs for points in the stratum of the label 16345fdea053SToby Isaac . minOrient - the smallest orientation for a point in this stratum 16355fdea053SToby Isaac . maxOrient - one greater than the largest orientation for a ppoint in this stratum (i.e., orientations are in the range [minOrient, maxOrient)) 16365fdea053SToby Isaac . mode - how sym should copy the perms and rots arrays 16375fdea053SToby Isaac . perms - NULL if there are no permutations, or (maxOrient - minOrient) permutations, one for each orientation. A NULL permutation is the identity 16385fdea053SToby Isaac + rots - NULL if there are no rotations, or (maxOrient - minOrient) sets of rotations, one for each orientation. A NULL set of orientations is the identity 16395fdea053SToby Isaac 16405fdea053SToby Isaac Level: developer 16415fdea053SToby Isaac 16425fdea053SToby Isaac .seealso: PetscSectionSymCreate(), PetscSectionSetSym(), PetscSectionGetPointSyms(), PetscSectionSymCreateLabel() 16435fdea053SToby Isaac @*/ 16445fdea053SToby Isaac PetscErrorCode PetscSectionSymLabelSetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt size, PetscInt minOrient, PetscInt maxOrient, PetscCopyMode mode, const PetscInt **perms, const PetscScalar **rots) 16455fdea053SToby Isaac { 16465fdea053SToby Isaac PetscInt i, j, k; 16475fdea053SToby Isaac PetscSectionSym_Label *sl; 16485fdea053SToby Isaac PetscErrorCode ierr; 16495fdea053SToby Isaac 16505fdea053SToby Isaac PetscFunctionBegin; 16515fdea053SToby Isaac PetscValidHeaderSpecific(sym,PETSC_SECTION_SYM_CLASSID,1); 16525fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 16535fdea053SToby Isaac if (!sl->label) SETERRQ(PetscObjectComm((PetscObject)sym),PETSC_ERR_ARG_WRONGSTATE,"No label set yet"); 16545fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 16555fdea053SToby Isaac PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 16565fdea053SToby Isaac 16575fdea053SToby Isaac if (stratum == value) break; 16585fdea053SToby Isaac } 16595fdea053SToby Isaac if (i > sl->numStrata) SETERRQ2(PetscObjectComm((PetscObject)sym),PETSC_ERR_ARG_OUTOFRANGE,"Stratum %D not found in label %s\n",stratum,sl->label->name); 16605fdea053SToby Isaac sl->sizes[i] = size; 16615fdea053SToby Isaac sl->modes[i] = mode; 16625fdea053SToby Isaac sl->minMaxOrients[i][0] = minOrient; 16635fdea053SToby Isaac sl->minMaxOrients[i][1] = maxOrient; 16645fdea053SToby Isaac if (mode == PETSC_COPY_VALUES) { 16655fdea053SToby Isaac if (perms) { 16665fdea053SToby Isaac PetscInt **ownPerms; 16675fdea053SToby Isaac 16685fdea053SToby Isaac ierr = PetscCalloc1(maxOrient - minOrient,&ownPerms);CHKERRQ(ierr); 16695fdea053SToby Isaac for (j = 0; j < maxOrient-minOrient; j++) { 16705fdea053SToby Isaac if (perms[j]) { 16715fdea053SToby Isaac ierr = PetscMalloc1(size,&ownPerms[j]);CHKERRQ(ierr); 16725fdea053SToby Isaac for (k = 0; k < size; k++) {ownPerms[j][k] = perms[j][k];} 16735fdea053SToby Isaac } 16745fdea053SToby Isaac } 16755fdea053SToby Isaac sl->perms[i] = (const PetscInt **) &ownPerms[-minOrient]; 16765fdea053SToby Isaac } 16775fdea053SToby Isaac if (rots) { 16785fdea053SToby Isaac PetscScalar **ownRots; 16795fdea053SToby Isaac 16805fdea053SToby Isaac ierr = PetscCalloc1(maxOrient - minOrient,&ownRots);CHKERRQ(ierr); 16815fdea053SToby Isaac for (j = 0; j < maxOrient-minOrient; j++) { 16825fdea053SToby Isaac if (rots[j]) { 16835fdea053SToby Isaac ierr = PetscMalloc1(size,&ownRots[j]);CHKERRQ(ierr); 16845fdea053SToby Isaac for (k = 0; k < size; k++) {ownRots[j][k] = rots[j][k];} 16855fdea053SToby Isaac } 16865fdea053SToby Isaac } 16875fdea053SToby Isaac sl->rots[i] = (const PetscScalar **) &ownRots[-minOrient]; 16885fdea053SToby Isaac } 16895fdea053SToby Isaac } else { 16905fdea053SToby Isaac sl->perms[i] = perms ? &perms[-minOrient] : NULL; 16915fdea053SToby Isaac sl->rots[i] = rots ? &rots[-minOrient] : NULL; 16925fdea053SToby Isaac } 16935fdea053SToby Isaac PetscFunctionReturn(0); 16945fdea053SToby Isaac } 16955fdea053SToby Isaac 16965fdea053SToby Isaac static PetscErrorCode PetscSectionSymGetPoints_Label(PetscSectionSym sym, PetscSection section, PetscInt numPoints, const PetscInt *points, const PetscInt **perms, const PetscScalar **rots) 16975fdea053SToby Isaac { 16985fdea053SToby Isaac PetscInt i, j, numStrata; 16995fdea053SToby Isaac PetscSectionSym_Label *sl; 17005fdea053SToby Isaac DMLabel label; 17015fdea053SToby Isaac PetscErrorCode ierr; 17025fdea053SToby Isaac 17035fdea053SToby Isaac PetscFunctionBegin; 17045fdea053SToby Isaac sl = (PetscSectionSym_Label *) sym->data; 17055fdea053SToby Isaac numStrata = sl->numStrata; 17065fdea053SToby Isaac label = sl->label; 17075fdea053SToby Isaac for (i = 0; i < numPoints; i++) { 17085fdea053SToby Isaac PetscInt point = points[2*i]; 17095fdea053SToby Isaac PetscInt ornt = points[2*i+1]; 17105fdea053SToby Isaac 17115fdea053SToby Isaac for (j = 0; j < numStrata; j++) { 17125fdea053SToby Isaac if (label->validIS[j]) { 17135fdea053SToby Isaac PetscInt k; 17145fdea053SToby Isaac 17155fdea053SToby Isaac ierr = ISLocate(label->points[j],point,&k);CHKERRQ(ierr); 17165fdea053SToby Isaac if (k >= 0) break; 17175fdea053SToby Isaac } else { 17185fdea053SToby Isaac PetscBool has; 17195fdea053SToby Isaac 17205fdea053SToby Isaac PetscHashIHasKey(label->ht[j], point, has); 17215fdea053SToby Isaac if (has) break; 17225fdea053SToby Isaac } 17235fdea053SToby Isaac } 17245fdea053SToby Isaac if ((sl->minMaxOrients[j][1] > sl->minMaxOrients[j][0]) && (ornt < sl->minMaxOrients[j][0] || ornt >= sl->minMaxOrients[j][1])) SETERRQ5(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"point %D orientation %D not in range [%D, %D) for stratum %D",point,ornt,sl->minMaxOrients[j][0],sl->minMaxOrients[j][1],j < numStrata ? label->stratumValues[j] : label->defaultValue); 17255fdea053SToby Isaac if (perms) {perms[i] = sl->perms[j] ? sl->perms[j][ornt] : NULL;} 17265fdea053SToby Isaac if (rots) {rots[i] = sl->rots[j] ? sl->rots[j][ornt] : NULL;} 17275fdea053SToby Isaac } 17285fdea053SToby Isaac PetscFunctionReturn(0); 17295fdea053SToby Isaac } 17305fdea053SToby Isaac 17315fdea053SToby Isaac PetscErrorCode PetscSectionSymCreate_Label(PetscSectionSym sym) 17325fdea053SToby Isaac { 17335fdea053SToby Isaac PetscSectionSym_Label *sl; 17345fdea053SToby Isaac PetscErrorCode ierr; 17355fdea053SToby Isaac 17365fdea053SToby Isaac PetscFunctionBegin; 17375fdea053SToby Isaac ierr = PetscNewLog(sym,&sl);CHKERRQ(ierr); 17385fdea053SToby Isaac sym->ops->getpoints = PetscSectionSymGetPoints_Label; 17395fdea053SToby Isaac sym->ops->view = PetscSectionSymView_Label; 17405fdea053SToby Isaac sym->ops->destroy = PetscSectionSymDestroy_Label; 17415fdea053SToby Isaac sym->data = (void *) sl; 17425fdea053SToby Isaac PetscFunctionReturn(0); 17435fdea053SToby Isaac } 17445fdea053SToby Isaac 17455fdea053SToby Isaac /*@ 17465fdea053SToby Isaac PetscSectionSymCreateLabel - Create a section symmetry that assigns one symmetry to each stratum of a label 17475fdea053SToby Isaac 17485fdea053SToby Isaac Collective 17495fdea053SToby Isaac 17505fdea053SToby Isaac Input Parameters: 17515fdea053SToby Isaac + comm - the MPI communicator for the new symmetry 17525fdea053SToby Isaac - label - the label defining the strata 17535fdea053SToby Isaac 17545fdea053SToby Isaac Output Parameters: 17555fdea053SToby Isaac . sym - the section symmetries 17565fdea053SToby Isaac 17575fdea053SToby Isaac Level: developer 17585fdea053SToby Isaac 17595fdea053SToby Isaac .seealso: PetscSectionSymCreate(), PetscSectionSetSym(), PetscSectionGetSym(), PetscSectionSymLabelSetStratum(), PetscSectionGetPointSyms() 17605fdea053SToby Isaac @*/ 17615fdea053SToby Isaac PetscErrorCode PetscSectionSymCreateLabel(MPI_Comm comm, DMLabel label, PetscSectionSym *sym) 17625fdea053SToby Isaac { 17635fdea053SToby Isaac PetscErrorCode ierr; 17645fdea053SToby Isaac 17655fdea053SToby Isaac PetscFunctionBegin; 17665fdea053SToby Isaac ierr = DMInitializePackage();CHKERRQ(ierr); 17675fdea053SToby Isaac ierr = PetscSectionSymCreate(comm,sym);CHKERRQ(ierr); 17685fdea053SToby Isaac ierr = PetscSectionSymSetType(*sym,PETSCSECTIONSYMLABEL);CHKERRQ(ierr); 17695fdea053SToby Isaac ierr = PetscSectionSymLabelSetLabel(*sym,label);CHKERRQ(ierr); 17705fdea053SToby Isaac PetscFunctionReturn(0); 17715fdea053SToby Isaac } 1772