15fdea053SToby Isaac #include <petscdm.h> 2c58f1c22SToby Isaac #include <petsc/private/dmlabelimpl.h> /*I "petscdmlabel.h" I*/ 3ea844a1aSMatthew Knepley #include <petsc/private/sectionimpl.h> /*I "petscsection.h" I*/ 4c58f1c22SToby Isaac #include <petscsf.h> 5ea844a1aSMatthew Knepley #include <petscsection.h> 6c58f1c22SToby Isaac 79f6c5813SMatthew G. Knepley PetscFunctionList DMLabelList = NULL; 89f6c5813SMatthew G. Knepley PetscBool DMLabelRegisterAllCalled = PETSC_FALSE; 99f6c5813SMatthew G. Knepley 10cc4c1da9SBarry Smith /*@ 1120f4b53cSBarry Smith DMLabelCreate - Create a `DMLabel` object, which is a multimap 12c58f1c22SToby Isaac 135b5e7992SMatthew G. Knepley Collective 145b5e7992SMatthew G. Knepley 1560225df5SJacob Faibussowitsch Input Parameters: 1620f4b53cSBarry Smith + comm - The communicator, usually `PETSC_COMM_SELF` 17d67d17b1SMatthew G. Knepley - name - The label name 18c58f1c22SToby Isaac 1960225df5SJacob Faibussowitsch Output Parameter: 2020f4b53cSBarry Smith . label - The `DMLabel` 21c58f1c22SToby Isaac 22c58f1c22SToby Isaac Level: beginner 23c58f1c22SToby Isaac 2405ab7a9fSVaclav Hapla Notes: 2520f4b53cSBarry Smith The label name is actually usually the `PetscObject` name. 2620f4b53cSBarry Smith One can get/set it with `PetscObjectGetName()`/`PetscObjectSetName()`. 2705ab7a9fSVaclav Hapla 2820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDestroy()` 29c58f1c22SToby Isaac @*/ 30d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCreate(MPI_Comm comm, const char name[], DMLabel *label) 31d71ae5a4SJacob Faibussowitsch { 32c58f1c22SToby Isaac PetscFunctionBegin; 334f572ea9SToby Isaac PetscAssertPointer(label, 3); 349566063dSJacob Faibussowitsch PetscCall(DMInitializePackage()); 35c58f1c22SToby Isaac 369566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(*label, DMLABEL_CLASSID, "DMLabel", "DMLabel", "DM", comm, DMLabelDestroy, DMLabelView)); 37d67d17b1SMatthew G. Knepley 38c58f1c22SToby Isaac (*label)->numStrata = 0; 395aa44df4SToby Isaac (*label)->defaultValue = -1; 40c58f1c22SToby Isaac (*label)->stratumValues = NULL; 41ad8374ffSToby Isaac (*label)->validIS = NULL; 42c58f1c22SToby Isaac (*label)->stratumSizes = NULL; 43c58f1c22SToby Isaac (*label)->points = NULL; 44c58f1c22SToby Isaac (*label)->ht = NULL; 45c58f1c22SToby Isaac (*label)->pStart = -1; 46c58f1c22SToby Isaac (*label)->pEnd = -1; 47c58f1c22SToby Isaac (*label)->bt = NULL; 489566063dSJacob Faibussowitsch PetscCall(PetscHMapICreate(&(*label)->hmap)); 499566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)*label, name)); 509f6c5813SMatthew G. Knepley PetscCall(DMLabelSetType(*label, DMLABELCONCRETE)); 513ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 529f6c5813SMatthew G. Knepley } 539f6c5813SMatthew G. Knepley 54cc4c1da9SBarry Smith /*@ 559f6c5813SMatthew G. Knepley DMLabelSetUp - SetUp a `DMLabel` object 569f6c5813SMatthew G. Knepley 579f6c5813SMatthew G. Knepley Collective 589f6c5813SMatthew G. Knepley 5960225df5SJacob Faibussowitsch Input Parameters: 609f6c5813SMatthew G. Knepley . label - The `DMLabel` 619f6c5813SMatthew G. Knepley 629f6c5813SMatthew G. Knepley Level: intermediate 639f6c5813SMatthew G. Knepley 6420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 659f6c5813SMatthew G. Knepley @*/ 669f6c5813SMatthew G. Knepley PetscErrorCode DMLabelSetUp(DMLabel label) 679f6c5813SMatthew G. Knepley { 689f6c5813SMatthew G. Knepley PetscFunctionBegin; 699f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 709f6c5813SMatthew G. Knepley PetscTryTypeMethod(label, setup); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 72c58f1c22SToby Isaac } 73c58f1c22SToby Isaac 74c58f1c22SToby Isaac /* 75c58f1c22SToby Isaac DMLabelMakeValid_Private - Transfer stratum data from the hash format to the sorted list format 76c58f1c22SToby Isaac 775b5e7992SMatthew G. Knepley Not collective 785b5e7992SMatthew G. Knepley 79c58f1c22SToby Isaac Input parameter: 8020f4b53cSBarry Smith + label - The `DMLabel` 81c58f1c22SToby Isaac - v - The stratum value 82c58f1c22SToby Isaac 83c58f1c22SToby Isaac Output parameter: 8420f4b53cSBarry Smith . label - The `DMLabel` with stratum in sorted list format 85c58f1c22SToby Isaac 86c58f1c22SToby Isaac Level: developer 87c58f1c22SToby Isaac 8820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 89c58f1c22SToby Isaac */ 90d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeValid_Private(DMLabel label, PetscInt v) 91d71ae5a4SJacob Faibussowitsch { 92277ea44aSLisandro Dalcin IS is; 93b9907514SLisandro Dalcin PetscInt off = 0, *pointArray, p; 94c58f1c22SToby Isaac 95c58f1c22SToby Isaac PetscFunctionBegin; 964d86920dSPierre Jolivet if ((PetscLikely(v >= 0 && v < label->numStrata) && label->validIS[v]) || label->readonly) PetscFunctionReturn(PETSC_SUCCESS); 971dca8a05SBarry Smith PetscCheck(v >= 0 && v < label->numStrata, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %" PetscInt_FMT " in DMLabelMakeValid_Private", v); 989566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(label->ht[v], &label->stratumSizes[v])); 999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->stratumSizes[v], &pointArray)); 1009566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetElems(label->ht[v], &off, pointArray)); 1019566063dSJacob Faibussowitsch PetscCall(PetscHSetIClear(label->ht[v])); 1029566063dSJacob Faibussowitsch PetscCall(PetscSortInt(label->stratumSizes[v], pointArray)); 103c58f1c22SToby Isaac if (label->bt) { 104c58f1c22SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 105ad8374ffSToby Isaac const PetscInt point = pointArray[p]; 10663a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 1079566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - label->pStart)); 108c58f1c22SToby Isaac } 109c58f1c22SToby Isaac } 110ba2698f1SMatthew G. Knepley if (label->stratumSizes[v] > 0 && pointArray[label->stratumSizes[v] - 1] == pointArray[0] + label->stratumSizes[v] - 1) { 1119566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, label->stratumSizes[v], pointArray[0], 1, &is)); 1129566063dSJacob Faibussowitsch PetscCall(PetscFree(pointArray)); 113ba2698f1SMatthew G. Knepley } else { 1149566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->stratumSizes[v], pointArray, PETSC_OWN_POINTER, &is)); 115ba2698f1SMatthew G. Knepley } 1169566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)is, "indices")); 117277ea44aSLisandro Dalcin label->points[v] = is; 118ad8374ffSToby Isaac label->validIS[v] = PETSC_TRUE; 1199566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 1203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121c58f1c22SToby Isaac } 122c58f1c22SToby Isaac 123c58f1c22SToby Isaac /* 124c58f1c22SToby Isaac DMLabelMakeAllValid_Private - Transfer all strata from the hash format to the sorted list format 125c58f1c22SToby Isaac 12620f4b53cSBarry Smith Not Collective 1275b5e7992SMatthew G. Knepley 128c58f1c22SToby Isaac Input parameter: 12920f4b53cSBarry Smith . label - The `DMLabel` 130c58f1c22SToby Isaac 131c58f1c22SToby Isaac Output parameter: 13220f4b53cSBarry Smith . label - The `DMLabel` with all strata in sorted list format 133c58f1c22SToby Isaac 134c58f1c22SToby Isaac Level: developer 135c58f1c22SToby Isaac 13620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 137c58f1c22SToby Isaac */ 138d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeAllValid_Private(DMLabel label) 139d71ae5a4SJacob Faibussowitsch { 140c58f1c22SToby Isaac PetscInt v; 141c58f1c22SToby Isaac 142c58f1c22SToby Isaac PetscFunctionBegin; 14348a46eb9SPierre Jolivet for (v = 0; v < label->numStrata; v++) PetscCall(DMLabelMakeValid_Private(label, v)); 1443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145c58f1c22SToby Isaac } 146c58f1c22SToby Isaac 147c58f1c22SToby Isaac /* 148c58f1c22SToby Isaac DMLabelMakeInvalid_Private - Transfer stratum data from the sorted list format to the hash format 149c58f1c22SToby Isaac 15020f4b53cSBarry Smith Not Collective 1515b5e7992SMatthew G. Knepley 152c58f1c22SToby Isaac Input parameter: 15320f4b53cSBarry Smith + label - The `DMLabel` 154c58f1c22SToby Isaac - v - The stratum value 155c58f1c22SToby Isaac 156c58f1c22SToby Isaac Output parameter: 15720f4b53cSBarry Smith . label - The `DMLabel` with stratum in hash format 158c58f1c22SToby Isaac 159c58f1c22SToby Isaac Level: developer 160c58f1c22SToby Isaac 16120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()` 162c58f1c22SToby Isaac */ 163d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelMakeInvalid_Private(DMLabel label, PetscInt v) 164d71ae5a4SJacob Faibussowitsch { 165c58f1c22SToby Isaac PetscInt p; 166ad8374ffSToby Isaac const PetscInt *points; 167c58f1c22SToby Isaac 168c58f1c22SToby Isaac PetscFunctionBegin; 1694d86920dSPierre Jolivet if ((PetscLikely(v >= 0 && v < label->numStrata) && !label->validIS[v]) || label->readonly) PetscFunctionReturn(PETSC_SUCCESS); 1701dca8a05SBarry Smith PetscCheck(v >= 0 && v < label->numStrata, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Trying to access invalid stratum %" PetscInt_FMT " in DMLabelMakeInvalid_Private", v); 171ad8374ffSToby Isaac if (label->points[v]) { 1729566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 17348a46eb9SPierre Jolivet for (p = 0; p < label->stratumSizes[v]; ++p) PetscCall(PetscHSetIAdd(label->ht[v], points[p])); 1749566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 175f4f49eeaSPierre Jolivet PetscCall(ISDestroy(&label->points[v])); 176ad8374ffSToby Isaac } 177ad8374ffSToby Isaac label->validIS[v] = PETSC_FALSE; 1783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 179c58f1c22SToby Isaac } 180c58f1c22SToby Isaac 181d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelMakeAllInvalid_Internal(DMLabel label) 182d71ae5a4SJacob Faibussowitsch { 183695799ffSMatthew G. Knepley PetscInt v; 184695799ffSMatthew G. Knepley 185695799ffSMatthew G. Knepley PetscFunctionBegin; 18648a46eb9SPierre Jolivet for (v = 0; v < label->numStrata; v++) PetscCall(DMLabelMakeInvalid_Private(label, v)); 1873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 188695799ffSMatthew G. Knepley } 189695799ffSMatthew G. Knepley 190b9907514SLisandro Dalcin #if !defined(DMLABEL_LOOKUP_THRESHOLD) 191b9907514SLisandro Dalcin #define DMLABEL_LOOKUP_THRESHOLD 16 192b9907514SLisandro Dalcin #endif 193b9907514SLisandro Dalcin 1949f6c5813SMatthew G. Knepley PetscErrorCode DMLabelLookupStratum(DMLabel label, PetscInt value, PetscInt *index) 195d71ae5a4SJacob Faibussowitsch { 1960c3c4a36SLisandro Dalcin PetscInt v; 1970e79e033SBarry Smith 1980c3c4a36SLisandro Dalcin PetscFunctionBegin; 1990e79e033SBarry Smith *index = -1; 2009f6c5813SMatthew G. Knepley if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD || label->readonly) { 201b9907514SLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 2029371c9d4SSatish Balay if (label->stratumValues[v] == value) { 2039371c9d4SSatish Balay *index = v; 2049371c9d4SSatish Balay break; 2059371c9d4SSatish Balay } 206b9907514SLisandro Dalcin } else { 2079566063dSJacob Faibussowitsch PetscCall(PetscHMapIGet(label->hmap, value, index)); 2080e79e033SBarry Smith } 2099f6c5813SMatthew G. Knepley if (PetscDefined(USE_DEBUG) && !label->readonly) { /* Check strata hash map consistency */ 21090e9b2aeSLisandro Dalcin PetscInt len, loc = -1; 2119566063dSJacob Faibussowitsch PetscCall(PetscHMapIGetSize(label->hmap, &len)); 21208401ef6SPierre Jolivet PetscCheck(len == label->numStrata, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map size"); 21390e9b2aeSLisandro Dalcin if (label->numStrata <= DMLABEL_LOOKUP_THRESHOLD) { 2149566063dSJacob Faibussowitsch PetscCall(PetscHMapIGet(label->hmap, value, &loc)); 21590e9b2aeSLisandro Dalcin } else { 21690e9b2aeSLisandro Dalcin for (v = 0; v < label->numStrata; ++v) 2179371c9d4SSatish Balay if (label->stratumValues[v] == value) { 2189371c9d4SSatish Balay loc = v; 2199371c9d4SSatish Balay break; 2209371c9d4SSatish Balay } 22190e9b2aeSLisandro Dalcin } 22208401ef6SPierre Jolivet PetscCheck(loc == *index, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Inconsistent strata hash map lookup"); 22390e9b2aeSLisandro Dalcin } 2243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2250c3c4a36SLisandro Dalcin } 2260c3c4a36SLisandro Dalcin 227d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode DMLabelNewStratum(DMLabel label, PetscInt value, PetscInt *index) 228d71ae5a4SJacob Faibussowitsch { 229b9907514SLisandro Dalcin PetscInt v; 230b9907514SLisandro Dalcin PetscInt *tmpV; 231b9907514SLisandro Dalcin PetscInt *tmpS; 232b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 233b9907514SLisandro Dalcin IS *tmpP, is; 234c58f1c22SToby Isaac PetscBool *tmpB; 235b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 236c58f1c22SToby Isaac 237c58f1c22SToby Isaac PetscFunctionBegin; 238b9907514SLisandro Dalcin v = label->numStrata; 239b9907514SLisandro Dalcin tmpV = label->stratumValues; 240b9907514SLisandro Dalcin tmpS = label->stratumSizes; 241b9907514SLisandro Dalcin tmpH = label->ht; 242b9907514SLisandro Dalcin tmpP = label->points; 243b9907514SLisandro Dalcin tmpB = label->validIS; 2448e1f8cf0SLisandro Dalcin { /* TODO: PetscRealloc() is broken, use malloc+memcpy+free */ 2458e1f8cf0SLisandro Dalcin PetscInt *oldV = tmpV; 2468e1f8cf0SLisandro Dalcin PetscInt *oldS = tmpS; 2478e1f8cf0SLisandro Dalcin PetscHSetI *oldH = tmpH; 2488e1f8cf0SLisandro Dalcin IS *oldP = tmpP; 2498e1f8cf0SLisandro Dalcin PetscBool *oldB = tmpB; 2509566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpV), &tmpV)); 2519566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpS), &tmpS)); 2529f6c5813SMatthew G. Knepley PetscCall(PetscCalloc((v + 1) * sizeof(*tmpH), &tmpH)); 2539f6c5813SMatthew G. Knepley PetscCall(PetscCalloc((v + 1) * sizeof(*tmpP), &tmpP)); 2549566063dSJacob Faibussowitsch PetscCall(PetscMalloc((v + 1) * sizeof(*tmpB), &tmpB)); 2559566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpV, oldV, v)); 2569566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpS, oldS, v)); 2579566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpH, oldH, v)); 2589566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpP, oldP, v)); 2599566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(tmpB, oldB, v)); 2609566063dSJacob Faibussowitsch PetscCall(PetscFree(oldV)); 2619566063dSJacob Faibussowitsch PetscCall(PetscFree(oldS)); 2629566063dSJacob Faibussowitsch PetscCall(PetscFree(oldH)); 2639566063dSJacob Faibussowitsch PetscCall(PetscFree(oldP)); 2649566063dSJacob Faibussowitsch PetscCall(PetscFree(oldB)); 2658e1f8cf0SLisandro Dalcin } 266b9907514SLisandro Dalcin label->numStrata = v + 1; 267c58f1c22SToby Isaac label->stratumValues = tmpV; 268c58f1c22SToby Isaac label->stratumSizes = tmpS; 269c58f1c22SToby Isaac label->ht = tmpH; 270c58f1c22SToby Isaac label->points = tmpP; 271ad8374ffSToby Isaac label->validIS = tmpB; 2729566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&ht)); 2739566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &is)); 2749566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(hmap, value, v)); 275b9907514SLisandro Dalcin tmpV[v] = value; 276b9907514SLisandro Dalcin tmpS[v] = 0; 277b9907514SLisandro Dalcin tmpH[v] = ht; 278b9907514SLisandro Dalcin tmpP[v] = is; 279b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 2809566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 2810c3c4a36SLisandro Dalcin *index = v; 2823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2830c3c4a36SLisandro Dalcin } 2840c3c4a36SLisandro Dalcin 285d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode DMLabelLookupAddStratum(DMLabel label, PetscInt value, PetscInt *index) 286d71ae5a4SJacob Faibussowitsch { 287b9907514SLisandro Dalcin PetscFunctionBegin; 2889566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, index)); 2899566063dSJacob Faibussowitsch if (*index < 0) PetscCall(DMLabelNewStratum(label, value, index)); 2903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 291b9907514SLisandro Dalcin } 292b9907514SLisandro Dalcin 2939f6c5813SMatthew G. Knepley PetscErrorCode DMLabelGetStratumSize_Private(DMLabel label, PetscInt v, PetscInt *size) 294d71ae5a4SJacob Faibussowitsch { 2959e63cc69SVaclav Hapla PetscFunctionBegin; 2969e63cc69SVaclav Hapla *size = 0; 2973ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 2989f6c5813SMatthew G. Knepley if (label->readonly || label->validIS[v]) { 2999e63cc69SVaclav Hapla *size = label->stratumSizes[v]; 3009e63cc69SVaclav Hapla } else { 3019566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(label->ht[v], size)); 3029e63cc69SVaclav Hapla } 3033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3049e63cc69SVaclav Hapla } 3059e63cc69SVaclav Hapla 306b9907514SLisandro Dalcin /*@ 30720f4b53cSBarry Smith DMLabelAddStratum - Adds a new stratum value in a `DMLabel` 308b9907514SLisandro Dalcin 309d8d19677SJose E. Roman Input Parameters: 31020f4b53cSBarry Smith + label - The `DMLabel` 311b9907514SLisandro Dalcin - value - The stratum value 312b9907514SLisandro Dalcin 313b9907514SLisandro Dalcin Level: beginner 314b9907514SLisandro Dalcin 31520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 316b9907514SLisandro Dalcin @*/ 317d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStratum(DMLabel label, PetscInt value) 318d71ae5a4SJacob Faibussowitsch { 3190c3c4a36SLisandro Dalcin PetscInt v; 3200c3c4a36SLisandro Dalcin 3210c3c4a36SLisandro Dalcin PetscFunctionBegin; 322d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 3239f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 3249566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 3253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 326b9907514SLisandro Dalcin } 327b9907514SLisandro Dalcin 328b9907514SLisandro Dalcin /*@ 32920f4b53cSBarry Smith DMLabelAddStrata - Adds new stratum values in a `DMLabel` 330b9907514SLisandro Dalcin 33120f4b53cSBarry Smith Not Collective 3325b5e7992SMatthew G. Knepley 333d8d19677SJose E. Roman Input Parameters: 33420f4b53cSBarry Smith + label - The `DMLabel` 335b9907514SLisandro Dalcin . numStrata - The number of stratum values 336b9907514SLisandro Dalcin - stratumValues - The stratum values 337b9907514SLisandro Dalcin 338b9907514SLisandro Dalcin Level: beginner 339b9907514SLisandro Dalcin 34020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 341b9907514SLisandro Dalcin @*/ 342d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStrata(DMLabel label, PetscInt numStrata, const PetscInt stratumValues[]) 343d71ae5a4SJacob Faibussowitsch { 344b9907514SLisandro Dalcin PetscInt *values, v; 345b9907514SLisandro Dalcin 346b9907514SLisandro Dalcin PetscFunctionBegin; 347b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 3484f572ea9SToby Isaac if (numStrata) PetscAssertPointer(stratumValues, 3); 3499f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 3509566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &values)); 3519566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(values, stratumValues, numStrata)); 3529566063dSJacob Faibussowitsch PetscCall(PetscSortRemoveDupsInt(&numStrata, values)); 353b9907514SLisandro Dalcin if (!label->numStrata) { /* Fast preallocation */ 354b9907514SLisandro Dalcin PetscInt *tmpV; 355b9907514SLisandro Dalcin PetscInt *tmpS; 356b9907514SLisandro Dalcin PetscHSetI *tmpH, ht; 357b9907514SLisandro Dalcin IS *tmpP, is; 358b9907514SLisandro Dalcin PetscBool *tmpB; 359b9907514SLisandro Dalcin PetscHMapI hmap = label->hmap; 360b9907514SLisandro Dalcin 3619566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpV)); 3629566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpS)); 3639f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(numStrata, &tmpH)); 3649f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(numStrata, &tmpP)); 3659566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(numStrata, &tmpB)); 366b9907514SLisandro Dalcin label->numStrata = numStrata; 367b9907514SLisandro Dalcin label->stratumValues = tmpV; 368b9907514SLisandro Dalcin label->stratumSizes = tmpS; 369b9907514SLisandro Dalcin label->ht = tmpH; 370b9907514SLisandro Dalcin label->points = tmpP; 371b9907514SLisandro Dalcin label->validIS = tmpB; 372b9907514SLisandro Dalcin for (v = 0; v < numStrata; ++v) { 3739566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&ht)); 3749566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &is)); 3759566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(hmap, values[v], v)); 376b9907514SLisandro Dalcin tmpV[v] = values[v]; 377b9907514SLisandro Dalcin tmpS[v] = 0; 378b9907514SLisandro Dalcin tmpH[v] = ht; 379b9907514SLisandro Dalcin tmpP[v] = is; 380b9907514SLisandro Dalcin tmpB[v] = PETSC_TRUE; 381b9907514SLisandro Dalcin } 3829566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 383b9907514SLisandro Dalcin } else { 38448a46eb9SPierre Jolivet for (v = 0; v < numStrata; ++v) PetscCall(DMLabelAddStratum(label, values[v])); 385b9907514SLisandro Dalcin } 3869566063dSJacob Faibussowitsch PetscCall(PetscFree(values)); 3873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 388b9907514SLisandro Dalcin } 389b9907514SLisandro Dalcin 390b9907514SLisandro Dalcin /*@ 39120f4b53cSBarry Smith DMLabelAddStrataIS - Adds new stratum values in a `DMLabel` 392b9907514SLisandro Dalcin 39320f4b53cSBarry Smith Not Collective 3945b5e7992SMatthew G. Knepley 395d8d19677SJose E. Roman Input Parameters: 39620f4b53cSBarry Smith + label - The `DMLabel` 397b9907514SLisandro Dalcin - valueIS - Index set with stratum values 398b9907514SLisandro Dalcin 399b9907514SLisandro Dalcin Level: beginner 400b9907514SLisandro Dalcin 40120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 402b9907514SLisandro Dalcin @*/ 403d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelAddStrataIS(DMLabel label, IS valueIS) 404d71ae5a4SJacob Faibussowitsch { 405b9907514SLisandro Dalcin PetscInt numStrata; 406b9907514SLisandro Dalcin const PetscInt *stratumValues; 407b9907514SLisandro Dalcin 408b9907514SLisandro Dalcin PetscFunctionBegin; 409b9907514SLisandro Dalcin PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 410b9907514SLisandro Dalcin PetscValidHeaderSpecific(valueIS, IS_CLASSID, 2); 4119f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 4129566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(valueIS, &numStrata)); 4139566063dSJacob Faibussowitsch PetscCall(ISGetIndices(valueIS, &stratumValues)); 4149566063dSJacob Faibussowitsch PetscCall(DMLabelAddStrata(label, numStrata, stratumValues)); 4153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 416c58f1c22SToby Isaac } 417c58f1c22SToby Isaac 4189f6c5813SMatthew G. Knepley static PetscErrorCode DMLabelView_Concrete_Ascii(DMLabel label, PetscViewer viewer) 419d71ae5a4SJacob Faibussowitsch { 420c58f1c22SToby Isaac PetscInt v; 421c58f1c22SToby Isaac PetscMPIInt rank; 422c58f1c22SToby Isaac 423c58f1c22SToby Isaac PetscFunctionBegin; 4249566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank)); 4259566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 426c58f1c22SToby Isaac if (label) { 427d67d17b1SMatthew G. Knepley const char *name; 428d67d17b1SMatthew G. Knepley 4299566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &name)); 4309566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Label '%s':\n", name)); 43163a3b9bcSJacob Faibussowitsch if (label->bt) PetscCall(PetscViewerASCIIPrintf(viewer, " Index has been calculated in [%" PetscInt_FMT ", %" PetscInt_FMT ")\n", label->pStart, label->pEnd)); 432c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 433c58f1c22SToby Isaac const PetscInt value = label->stratumValues[v]; 434ad8374ffSToby Isaac const PetscInt *points; 435c58f1c22SToby Isaac PetscInt p; 436c58f1c22SToby Isaac 4379566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 43848a46eb9SPierre Jolivet for (p = 0; p < label->stratumSizes[v]; ++p) PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %" PetscInt_FMT " (%" PetscInt_FMT ")\n", rank, points[p], value)); 4399566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 440c58f1c22SToby Isaac } 441c58f1c22SToby Isaac } 4429566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 4439566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 4443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 445c58f1c22SToby Isaac } 446c58f1c22SToby Isaac 44766976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelView_Concrete(DMLabel label, PetscViewer viewer) 4489f6c5813SMatthew G. Knepley { 4499f6c5813SMatthew G. Knepley PetscBool iascii; 4509f6c5813SMatthew G. Knepley 4519f6c5813SMatthew G. Knepley PetscFunctionBegin; 4529f6c5813SMatthew G. Knepley PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 4539f6c5813SMatthew G. Knepley if (iascii) PetscCall(DMLabelView_Concrete_Ascii(label, viewer)); 4543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4559f6c5813SMatthew G. Knepley } 4569f6c5813SMatthew G. Knepley 457*ffeef943SBarry Smith /*@ 458c58f1c22SToby Isaac DMLabelView - View the label 459c58f1c22SToby Isaac 46020f4b53cSBarry Smith Collective 4615b5e7992SMatthew G. Knepley 462c58f1c22SToby Isaac Input Parameters: 46320f4b53cSBarry Smith + label - The `DMLabel` 46420f4b53cSBarry Smith - viewer - The `PetscViewer` 465c58f1c22SToby Isaac 466c58f1c22SToby Isaac Level: intermediate 467c58f1c22SToby Isaac 46820f4b53cSBarry Smith .seealso: `DMLabel`, `PetscViewer`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 469c58f1c22SToby Isaac @*/ 470d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelView(DMLabel label, PetscViewer viewer) 471d71ae5a4SJacob Faibussowitsch { 472c58f1c22SToby Isaac PetscFunctionBegin; 473d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 4749566063dSJacob Faibussowitsch if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)label), &viewer)); 475c58f1c22SToby Isaac PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 4769f6c5813SMatthew G. Knepley PetscCall(DMLabelMakeAllValid_Private(label)); 4779f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, view, viewer); 4783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 479c58f1c22SToby Isaac } 480c58f1c22SToby Isaac 48184f0b6dfSMatthew G. Knepley /*@ 48220f4b53cSBarry Smith DMLabelReset - Destroys internal data structures in a `DMLabel` 483d67d17b1SMatthew G. Knepley 48420f4b53cSBarry Smith Not Collective 4855b5e7992SMatthew G. Knepley 486d67d17b1SMatthew G. Knepley Input Parameter: 48720f4b53cSBarry Smith . label - The `DMLabel` 488d67d17b1SMatthew G. Knepley 489d67d17b1SMatthew G. Knepley Level: beginner 490d67d17b1SMatthew G. Knepley 49120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDestroy()`, `DMLabelCreate()` 492d67d17b1SMatthew G. Knepley @*/ 493d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelReset(DMLabel label) 494d71ae5a4SJacob Faibussowitsch { 495d67d17b1SMatthew G. Knepley PetscInt v; 496d67d17b1SMatthew G. Knepley 497d67d17b1SMatthew G. Knepley PetscFunctionBegin; 498d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 499d67d17b1SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 5009f6c5813SMatthew G. Knepley if (label->ht[v]) PetscCall(PetscHSetIDestroy(&label->ht[v])); 5019566063dSJacob Faibussowitsch PetscCall(ISDestroy(&label->points[v])); 502d67d17b1SMatthew G. Knepley } 503b9907514SLisandro Dalcin label->numStrata = 0; 5049566063dSJacob Faibussowitsch PetscCall(PetscFree(label->stratumValues)); 5059566063dSJacob Faibussowitsch PetscCall(PetscFree(label->stratumSizes)); 5069566063dSJacob Faibussowitsch PetscCall(PetscFree(label->ht)); 5079566063dSJacob Faibussowitsch PetscCall(PetscFree(label->points)); 5089566063dSJacob Faibussowitsch PetscCall(PetscFree(label->validIS)); 5099566063dSJacob Faibussowitsch PetscCall(PetscHMapIReset(label->hmap)); 510b9907514SLisandro Dalcin label->pStart = -1; 511b9907514SLisandro Dalcin label->pEnd = -1; 5129566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 5133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 514d67d17b1SMatthew G. Knepley } 515d67d17b1SMatthew G. Knepley 516d67d17b1SMatthew G. Knepley /*@ 51720f4b53cSBarry Smith DMLabelDestroy - Destroys a `DMLabel` 51884f0b6dfSMatthew G. Knepley 51920f4b53cSBarry Smith Collective 5205b5e7992SMatthew G. Knepley 52184f0b6dfSMatthew G. Knepley Input Parameter: 52220f4b53cSBarry Smith . label - The `DMLabel` 52384f0b6dfSMatthew G. Knepley 52484f0b6dfSMatthew G. Knepley Level: beginner 52584f0b6dfSMatthew G. Knepley 52620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelReset()`, `DMLabelCreate()` 52784f0b6dfSMatthew G. Knepley @*/ 528d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDestroy(DMLabel *label) 529d71ae5a4SJacob Faibussowitsch { 530c58f1c22SToby Isaac PetscFunctionBegin; 5313ba16761SJacob Faibussowitsch if (!*label) PetscFunctionReturn(PETSC_SUCCESS); 532f4f49eeaSPierre Jolivet PetscValidHeaderSpecific(*label, DMLABEL_CLASSID, 1); 533f4f49eeaSPierre Jolivet if (--((PetscObject)*label)->refct > 0) { 5349371c9d4SSatish Balay *label = NULL; 5353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5369371c9d4SSatish Balay } 5379566063dSJacob Faibussowitsch PetscCall(DMLabelReset(*label)); 5389566063dSJacob Faibussowitsch PetscCall(PetscHMapIDestroy(&(*label)->hmap)); 5399566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(label)); 5403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 541c58f1c22SToby Isaac } 542c58f1c22SToby Isaac 54366976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelDuplicate_Concrete(DMLabel label, DMLabel *labelnew) 5449f6c5813SMatthew G. Knepley { 5459f6c5813SMatthew G. Knepley PetscFunctionBegin; 5469f6c5813SMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 5479f6c5813SMatthew G. Knepley PetscCall(PetscHSetICreate(&(*labelnew)->ht[v])); 548f4f49eeaSPierre Jolivet PetscCall(PetscObjectReference((PetscObject)label->points[v])); 5499f6c5813SMatthew G. Knepley (*labelnew)->points[v] = label->points[v]; 5509f6c5813SMatthew G. Knepley } 5519f6c5813SMatthew G. Knepley PetscCall(PetscHMapIDestroy(&(*labelnew)->hmap)); 5529f6c5813SMatthew G. Knepley PetscCall(PetscHMapIDuplicate(label->hmap, &(*labelnew)->hmap)); 5533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5549f6c5813SMatthew G. Knepley } 5559f6c5813SMatthew G. Knepley 55684f0b6dfSMatthew G. Knepley /*@ 55720f4b53cSBarry Smith DMLabelDuplicate - Duplicates a `DMLabel` 55884f0b6dfSMatthew G. Knepley 55920f4b53cSBarry Smith Collective 5605b5e7992SMatthew G. Knepley 56184f0b6dfSMatthew G. Knepley Input Parameter: 56220f4b53cSBarry Smith . label - The `DMLabel` 56384f0b6dfSMatthew G. Knepley 56484f0b6dfSMatthew G. Knepley Output Parameter: 56520f4b53cSBarry Smith . labelnew - new label 56684f0b6dfSMatthew G. Knepley 56784f0b6dfSMatthew G. Knepley Level: intermediate 56884f0b6dfSMatthew G. Knepley 56920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelDestroy()` 57084f0b6dfSMatthew G. Knepley @*/ 571d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDuplicate(DMLabel label, DMLabel *labelnew) 572d71ae5a4SJacob Faibussowitsch { 573d67d17b1SMatthew G. Knepley const char *name; 574c58f1c22SToby Isaac 575c58f1c22SToby Isaac PetscFunctionBegin; 576d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 5779566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 5789566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &name)); 5799566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PetscObjectComm((PetscObject)label), name, labelnew)); 580c58f1c22SToby Isaac 581c58f1c22SToby Isaac (*labelnew)->numStrata = label->numStrata; 5825aa44df4SToby Isaac (*labelnew)->defaultValue = label->defaultValue; 5838dcf10e8SMatthew G. Knepley (*labelnew)->readonly = label->readonly; 5849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->stratumValues)); 5859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->stratumSizes)); 5869f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(label->numStrata, &(*labelnew)->ht)); 5879f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(label->numStrata, &(*labelnew)->points)); 5889566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &(*labelnew)->validIS)); 5899f6c5813SMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 590c58f1c22SToby Isaac (*labelnew)->stratumValues[v] = label->stratumValues[v]; 591c58f1c22SToby Isaac (*labelnew)->stratumSizes[v] = label->stratumSizes[v]; 592b9907514SLisandro Dalcin (*labelnew)->validIS[v] = PETSC_TRUE; 593c58f1c22SToby Isaac } 594c58f1c22SToby Isaac (*labelnew)->pStart = -1; 595c58f1c22SToby Isaac (*labelnew)->pEnd = -1; 596c58f1c22SToby Isaac (*labelnew)->bt = NULL; 5979f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, duplicate, labelnew); 5983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 599c58f1c22SToby Isaac } 600c58f1c22SToby Isaac 601609dae6eSVaclav Hapla /*@C 60220f4b53cSBarry Smith DMLabelCompare - Compare two `DMLabel` objects 603609dae6eSVaclav Hapla 60420f4b53cSBarry Smith Collective; No Fortran Support 605609dae6eSVaclav Hapla 606609dae6eSVaclav Hapla Input Parameters: 607f1a722f8SMatthew G. Knepley + comm - Comm over which to compare labels 60820f4b53cSBarry Smith . l0 - First `DMLabel` 60920f4b53cSBarry Smith - l1 - Second `DMLabel` 610609dae6eSVaclav Hapla 611a4e35b19SJacob Faibussowitsch Output Parameters: 6125efe38ccSVaclav Hapla + equal - (Optional) Flag whether the two labels are equal 6135efe38ccSVaclav Hapla - message - (Optional) Message describing the difference 614609dae6eSVaclav Hapla 615609dae6eSVaclav Hapla Level: intermediate 616609dae6eSVaclav Hapla 617609dae6eSVaclav Hapla Notes: 6185efe38ccSVaclav Hapla The output flag equal is the same on all processes. 61920f4b53cSBarry Smith If it is passed as `NULL` and difference is found, an error is thrown on all processes. 62020f4b53cSBarry Smith Make sure to pass `NULL` on all processes. 621609dae6eSVaclav Hapla 6225efe38ccSVaclav Hapla The output message is set independently on each rank. 62320f4b53cSBarry Smith It is set to `NULL` if no difference was found on the current rank. It must be freed by user. 62420f4b53cSBarry Smith If message is passed as `NULL` and difference is found, the difference description is printed to stderr in synchronized manner. 62520f4b53cSBarry Smith Make sure to pass `NULL` on all processes. 626609dae6eSVaclav Hapla 627609dae6eSVaclav Hapla For the comparison, we ignore the order of stratum values, and strata with no points. 628609dae6eSVaclav Hapla 62920f4b53cSBarry Smith The communicator needs to be specified because currently `DMLabel` can live on `PETSC_COMM_SELF` even if the underlying `DM` is parallel. 6305efe38ccSVaclav Hapla 631a3b724e8SBarry Smith Developer Note: 632a3b724e8SBarry Smith Fortran stub cannot be generated automatically because `message` must be freed with `PetscFree()` 633a3b724e8SBarry Smith 63420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMCompareLabels()`, `DMLabelGetNumValues()`, `DMLabelGetDefaultValue()`, `DMLabelGetNonEmptyStratumValuesIS()`, `DMLabelGetStratumIS()` 635609dae6eSVaclav Hapla @*/ 636d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCompare(MPI_Comm comm, DMLabel l0, DMLabel l1, PetscBool *equal, char **message) 637d71ae5a4SJacob Faibussowitsch { 638609dae6eSVaclav Hapla const char *name0, *name1; 639609dae6eSVaclav Hapla char msg[PETSC_MAX_PATH_LEN] = ""; 6405efe38ccSVaclav Hapla PetscBool eq; 6415efe38ccSVaclav Hapla PetscMPIInt rank; 642609dae6eSVaclav Hapla 643609dae6eSVaclav Hapla PetscFunctionBegin; 6445efe38ccSVaclav Hapla PetscValidHeaderSpecific(l0, DMLABEL_CLASSID, 2); 6455efe38ccSVaclav Hapla PetscValidHeaderSpecific(l1, DMLABEL_CLASSID, 3); 6464f572ea9SToby Isaac if (equal) PetscAssertPointer(equal, 4); 6474f572ea9SToby Isaac if (message) PetscAssertPointer(message, 5); 6489566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 6499566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)l0, &name0)); 6509566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)l1, &name1)); 651609dae6eSVaclav Hapla { 652609dae6eSVaclav Hapla PetscInt v0, v1; 653609dae6eSVaclav Hapla 6549566063dSJacob Faibussowitsch PetscCall(DMLabelGetDefaultValue(l0, &v0)); 6559566063dSJacob Faibussowitsch PetscCall(DMLabelGetDefaultValue(l1, &v1)); 6565efe38ccSVaclav Hapla eq = (PetscBool)(v0 == v1); 65748a46eb9SPierre Jolivet if (!eq) PetscCall(PetscSNPrintf(msg, sizeof(msg), "Default value of DMLabel l0 \"%s\" = %" PetscInt_FMT " != %" PetscInt_FMT " = Default value of DMLabel l1 \"%s\"", name0, v0, v1, name1)); 658712fec58SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPIU_BOOL, MPI_LAND, comm)); 6595efe38ccSVaclav Hapla if (!eq) goto finish; 660609dae6eSVaclav Hapla } 661609dae6eSVaclav Hapla { 662609dae6eSVaclav Hapla IS is0, is1; 663609dae6eSVaclav Hapla 6649566063dSJacob Faibussowitsch PetscCall(DMLabelGetNonEmptyStratumValuesIS(l0, &is0)); 6659566063dSJacob Faibussowitsch PetscCall(DMLabelGetNonEmptyStratumValuesIS(l1, &is1)); 6669566063dSJacob Faibussowitsch PetscCall(ISEqual(is0, is1, &eq)); 6679566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is0)); 6689566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is1)); 66948a46eb9SPierre Jolivet if (!eq) PetscCall(PetscSNPrintf(msg, sizeof(msg), "Stratum values in DMLabel l0 \"%s\" are different than in DMLabel l1 \"%s\"", name0, name1)); 670712fec58SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPIU_BOOL, MPI_LAND, comm)); 6715efe38ccSVaclav Hapla if (!eq) goto finish; 672609dae6eSVaclav Hapla } 673609dae6eSVaclav Hapla { 674609dae6eSVaclav Hapla PetscInt i, nValues; 675609dae6eSVaclav Hapla 6769566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(l0, &nValues)); 677609dae6eSVaclav Hapla for (i = 0; i < nValues; i++) { 678609dae6eSVaclav Hapla const PetscInt v = l0->stratumValues[i]; 679609dae6eSVaclav Hapla PetscInt n; 680609dae6eSVaclav Hapla IS is0, is1; 681609dae6eSVaclav Hapla 6829566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(l0, i, &n)); 683609dae6eSVaclav Hapla if (!n) continue; 6849566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(l0, v, &is0)); 6859566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(l1, v, &is1)); 6869566063dSJacob Faibussowitsch PetscCall(ISEqualUnsorted(is0, is1, &eq)); 6879566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is0)); 6889566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is1)); 6895efe38ccSVaclav Hapla if (!eq) { 69063a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(msg, sizeof(msg), "Stratum #%" PetscInt_FMT " with value %" PetscInt_FMT " contains different points in DMLabel l0 \"%s\" and DMLabel l1 \"%s\"", i, v, name0, name1)); 6915efe38ccSVaclav Hapla break; 692609dae6eSVaclav Hapla } 693609dae6eSVaclav Hapla } 694712fec58SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &eq, 1, MPIU_BOOL, MPI_LAND, comm)); 695609dae6eSVaclav Hapla } 696609dae6eSVaclav Hapla finish: 6975efe38ccSVaclav Hapla /* If message output arg not set, print to stderr */ 698609dae6eSVaclav Hapla if (message) { 699609dae6eSVaclav Hapla *message = NULL; 70048a46eb9SPierre Jolivet if (msg[0]) PetscCall(PetscStrallocpy(msg, message)); 7015efe38ccSVaclav Hapla } else { 70248a46eb9SPierre Jolivet if (msg[0]) PetscCall(PetscSynchronizedFPrintf(comm, PETSC_STDERR, "[%d] %s\n", rank, msg)); 7039566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(comm, PETSC_STDERR)); 7045efe38ccSVaclav Hapla } 7055efe38ccSVaclav Hapla /* If same output arg not ser and labels are not equal, throw error */ 7065efe38ccSVaclav Hapla if (equal) *equal = eq; 70763a3b9bcSJacob Faibussowitsch else PetscCheck(eq, comm, PETSC_ERR_ARG_INCOMP, "DMLabels l0 \"%s\" and l1 \"%s\" are not equal", name0, name1); 7083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 709609dae6eSVaclav Hapla } 710609dae6eSVaclav Hapla 711c6a43d28SMatthew G. Knepley /*@ 712c6a43d28SMatthew G. Knepley DMLabelComputeIndex - Create an index structure for membership determination, automatically determining the bounds 713c6a43d28SMatthew G. Knepley 71420f4b53cSBarry Smith Not Collective 7155b5e7992SMatthew G. Knepley 716c6a43d28SMatthew G. Knepley Input Parameter: 71720f4b53cSBarry Smith . label - The `DMLabel` 718c6a43d28SMatthew G. Knepley 719c6a43d28SMatthew G. Knepley Level: intermediate 720c6a43d28SMatthew G. Knepley 72120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelDestroyIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 722c6a43d28SMatthew G. Knepley @*/ 723d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelComputeIndex(DMLabel label) 724d71ae5a4SJacob Faibussowitsch { 725c6a43d28SMatthew G. Knepley PetscInt pStart = PETSC_MAX_INT, pEnd = -1, v; 726c6a43d28SMatthew G. Knepley 727c6a43d28SMatthew G. Knepley PetscFunctionBegin; 728c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 7299566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 730c6a43d28SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 731c6a43d28SMatthew G. Knepley const PetscInt *points; 732c6a43d28SMatthew G. Knepley PetscInt i; 733c6a43d28SMatthew G. Knepley 7349566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 735c6a43d28SMatthew G. Knepley for (i = 0; i < label->stratumSizes[v]; ++i) { 736c6a43d28SMatthew G. Knepley const PetscInt point = points[i]; 737c6a43d28SMatthew G. Knepley 738c6a43d28SMatthew G. Knepley pStart = PetscMin(point, pStart); 739c6a43d28SMatthew G. Knepley pEnd = PetscMax(point + 1, pEnd); 740c6a43d28SMatthew G. Knepley } 7419566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 742c6a43d28SMatthew G. Knepley } 743c6a43d28SMatthew G. Knepley label->pStart = pStart == PETSC_MAX_INT ? -1 : pStart; 744c6a43d28SMatthew G. Knepley label->pEnd = pEnd; 7459566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, label->pStart, label->pEnd)); 7463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 747c6a43d28SMatthew G. Knepley } 748c6a43d28SMatthew G. Knepley 749c6a43d28SMatthew G. Knepley /*@ 750c6a43d28SMatthew G. Knepley DMLabelCreateIndex - Create an index structure for membership determination 751c6a43d28SMatthew G. Knepley 75220f4b53cSBarry Smith Not Collective 7535b5e7992SMatthew G. Knepley 754c6a43d28SMatthew G. Knepley Input Parameters: 75520f4b53cSBarry Smith + label - The `DMLabel` 756c6a43d28SMatthew G. Knepley . pStart - The smallest point 757c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 758c6a43d28SMatthew G. Knepley 759c6a43d28SMatthew G. Knepley Level: intermediate 760c6a43d28SMatthew G. Knepley 76120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelComputeIndex()`, `DMLabelDestroyIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 762c6a43d28SMatthew G. Knepley @*/ 763d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelCreateIndex(DMLabel label, PetscInt pStart, PetscInt pEnd) 764d71ae5a4SJacob Faibussowitsch { 765c58f1c22SToby Isaac PetscInt v; 766c58f1c22SToby Isaac 767c58f1c22SToby Isaac PetscFunctionBegin; 768d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 7699566063dSJacob Faibussowitsch PetscCall(DMLabelDestroyIndex(label)); 7709566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 771c58f1c22SToby Isaac label->pStart = pStart; 772c58f1c22SToby Isaac label->pEnd = pEnd; 773c6a43d28SMatthew G. Knepley /* This can be hooked into SetValue(), ClearValue(), etc. for updating */ 7749566063dSJacob Faibussowitsch PetscCall(PetscBTCreate(pEnd - pStart, &label->bt)); 775c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 7769f6c5813SMatthew G. Knepley IS pointIS; 777ad8374ffSToby Isaac const PetscInt *points; 778c58f1c22SToby Isaac PetscInt i; 779c58f1c22SToby Isaac 7809f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &pointIS); 7819f6c5813SMatthew G. Knepley PetscCall(ISGetIndices(pointIS, &points)); 782c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 783ad8374ffSToby Isaac const PetscInt point = points[i]; 784c58f1c22SToby Isaac 7859f6c5813SMatthew G. Knepley PetscCheck(!(point < pStart) && !(point >= pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " in stratum %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->stratumValues[v], pStart, pEnd); 7869566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - pStart)); 787c58f1c22SToby Isaac } 7889566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 7899f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&pointIS)); 790c58f1c22SToby Isaac } 7913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 792c58f1c22SToby Isaac } 793c58f1c22SToby Isaac 794c6a43d28SMatthew G. Knepley /*@ 795c6a43d28SMatthew G. Knepley DMLabelDestroyIndex - Destroy the index structure 796c6a43d28SMatthew G. Knepley 79720f4b53cSBarry Smith Not Collective 7985b5e7992SMatthew G. Knepley 799c6a43d28SMatthew G. Knepley Input Parameter: 80020f4b53cSBarry Smith . label - the `DMLabel` 801c6a43d28SMatthew G. Knepley 802c6a43d28SMatthew G. Knepley Level: intermediate 803c6a43d28SMatthew G. Knepley 80420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 805c6a43d28SMatthew G. Knepley @*/ 806d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDestroyIndex(DMLabel label) 807d71ae5a4SJacob Faibussowitsch { 808c58f1c22SToby Isaac PetscFunctionBegin; 809d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 810c58f1c22SToby Isaac label->pStart = -1; 811c58f1c22SToby Isaac label->pEnd = -1; 8129566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 8133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 814c58f1c22SToby Isaac } 815c58f1c22SToby Isaac 816c58f1c22SToby Isaac /*@ 817c6a43d28SMatthew G. Knepley DMLabelGetBounds - Return the smallest and largest point in the label 818c6a43d28SMatthew G. Knepley 81920f4b53cSBarry Smith Not Collective 8205b5e7992SMatthew G. Knepley 821c6a43d28SMatthew G. Knepley Input Parameter: 82220f4b53cSBarry Smith . label - the `DMLabel` 823c6a43d28SMatthew G. Knepley 824c6a43d28SMatthew G. Knepley Output Parameters: 825c6a43d28SMatthew G. Knepley + pStart - The smallest point 826c6a43d28SMatthew G. Knepley - pEnd - The largest point + 1 827c6a43d28SMatthew G. Knepley 828c6a43d28SMatthew G. Knepley Level: intermediate 829c6a43d28SMatthew G. Knepley 83020f4b53cSBarry Smith Note: 83120f4b53cSBarry Smith This will compute an index for the label if one does not exist. 83220f4b53cSBarry Smith 83320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 834c6a43d28SMatthew G. Knepley @*/ 835d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetBounds(DMLabel label, PetscInt *pStart, PetscInt *pEnd) 836d71ae5a4SJacob Faibussowitsch { 837c6a43d28SMatthew G. Knepley PetscFunctionBegin; 838c6a43d28SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8399566063dSJacob Faibussowitsch if ((label->pStart == -1) && (label->pEnd == -1)) PetscCall(DMLabelComputeIndex(label)); 840c6a43d28SMatthew G. Knepley if (pStart) { 8414f572ea9SToby Isaac PetscAssertPointer(pStart, 2); 842c6a43d28SMatthew G. Knepley *pStart = label->pStart; 843c6a43d28SMatthew G. Knepley } 844c6a43d28SMatthew G. Knepley if (pEnd) { 8454f572ea9SToby Isaac PetscAssertPointer(pEnd, 3); 846c6a43d28SMatthew G. Knepley *pEnd = label->pEnd; 847c6a43d28SMatthew G. Knepley } 8483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 849c6a43d28SMatthew G. Knepley } 850c6a43d28SMatthew G. Knepley 851c6a43d28SMatthew G. Knepley /*@ 852c58f1c22SToby Isaac DMLabelHasValue - Determine whether a label assigns the value to any point 853c58f1c22SToby Isaac 85420f4b53cSBarry Smith Not Collective 8555b5e7992SMatthew G. Knepley 856c58f1c22SToby Isaac Input Parameters: 85720f4b53cSBarry Smith + label - the `DMLabel` 858c58f1c22SToby Isaac - value - the value 859c58f1c22SToby Isaac 860c58f1c22SToby Isaac Output Parameter: 861c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this value to any point 862c58f1c22SToby Isaac 863c58f1c22SToby Isaac Level: developer 864c58f1c22SToby Isaac 86520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelHasPoint()`, `DMLabelGetValue()`, `DMLabelSetValue()` 866c58f1c22SToby Isaac @*/ 867d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasValue(DMLabel label, PetscInt value, PetscBool *contains) 868d71ae5a4SJacob Faibussowitsch { 869c58f1c22SToby Isaac PetscInt v; 870c58f1c22SToby Isaac 871c58f1c22SToby Isaac PetscFunctionBegin; 872d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 8734f572ea9SToby Isaac PetscAssertPointer(contains, 3); 8749566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 8750c3c4a36SLisandro Dalcin *contains = v < 0 ? PETSC_FALSE : PETSC_TRUE; 8763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 877c58f1c22SToby Isaac } 878c58f1c22SToby Isaac 879c58f1c22SToby Isaac /*@ 880c58f1c22SToby Isaac DMLabelHasPoint - Determine whether a label assigns a value to a point 881c58f1c22SToby Isaac 88220f4b53cSBarry Smith Not Collective 8835b5e7992SMatthew G. Knepley 884c58f1c22SToby Isaac Input Parameters: 88520f4b53cSBarry Smith + label - the `DMLabel` 886c58f1c22SToby Isaac - point - the point 887c58f1c22SToby Isaac 888c58f1c22SToby Isaac Output Parameter: 889c58f1c22SToby Isaac . contains - Flag indicating whether the label maps this point to a value 890c58f1c22SToby Isaac 891c58f1c22SToby Isaac Level: developer 892c58f1c22SToby Isaac 89320f4b53cSBarry Smith Note: 89420f4b53cSBarry Smith The user must call `DMLabelCreateIndex()` before this function. 89520f4b53cSBarry Smith 89620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreateIndex()`, `DMLabelGetValue()`, `DMLabelSetValue()` 897c58f1c22SToby Isaac @*/ 898d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasPoint(DMLabel label, PetscInt point, PetscBool *contains) 899d71ae5a4SJacob Faibussowitsch { 900c58f1c22SToby Isaac PetscFunctionBeginHot; 901d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9024f572ea9SToby Isaac PetscAssertPointer(contains, 3); 9039566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 90476bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { 90528b400f6SJacob Faibussowitsch PetscCheck(label->bt, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call DMLabelCreateIndex() before DMLabelHasPoint()"); 90663a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 90776bd3646SJed Brown } 908c58f1c22SToby Isaac *contains = PetscBTLookup(label->bt, point - label->pStart) ? PETSC_TRUE : PETSC_FALSE; 9093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 910c58f1c22SToby Isaac } 911c58f1c22SToby Isaac 912c58f1c22SToby Isaac /*@ 913c58f1c22SToby Isaac DMLabelStratumHasPoint - Return true if the stratum contains a point 914c58f1c22SToby Isaac 91520f4b53cSBarry Smith Not Collective 9165b5e7992SMatthew G. Knepley 917c58f1c22SToby Isaac Input Parameters: 91820f4b53cSBarry Smith + label - the `DMLabel` 919c58f1c22SToby Isaac . value - the stratum value 920c58f1c22SToby Isaac - point - the point 921c58f1c22SToby Isaac 922c58f1c22SToby Isaac Output Parameter: 923c58f1c22SToby Isaac . contains - true if the stratum contains the point 924c58f1c22SToby Isaac 925c58f1c22SToby Isaac Level: intermediate 926c58f1c22SToby Isaac 92720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetValue()`, `DMLabelClearValue()` 928c58f1c22SToby Isaac @*/ 929d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelStratumHasPoint(DMLabel label, PetscInt value, PetscInt point, PetscBool *contains) 930d71ae5a4SJacob Faibussowitsch { 9310c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 932d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9334f572ea9SToby Isaac PetscAssertPointer(contains, 4); 934cffad2c9SToby Isaac if (value == label->defaultValue) { 935cffad2c9SToby Isaac PetscInt pointVal; 9360c3c4a36SLisandro Dalcin 937cffad2c9SToby Isaac PetscCall(DMLabelGetValue(label, point, &pointVal)); 938cffad2c9SToby Isaac *contains = (PetscBool)(pointVal == value); 939cffad2c9SToby Isaac } else { 940cffad2c9SToby Isaac PetscInt v; 941cffad2c9SToby Isaac 942cffad2c9SToby Isaac PetscCall(DMLabelLookupStratum(label, value, &v)); 943cffad2c9SToby Isaac if (v >= 0) { 9449f6c5813SMatthew G. Knepley if (label->validIS[v] || label->readonly) { 9459f6c5813SMatthew G. Knepley IS is; 946c58f1c22SToby Isaac PetscInt i; 947c58f1c22SToby Isaac 9489f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 9499f6c5813SMatthew G. Knepley PetscCall(ISLocate(is, point, &i)); 9509f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 951cffad2c9SToby Isaac *contains = (PetscBool)(i >= 0); 952c58f1c22SToby Isaac } else { 953cffad2c9SToby Isaac PetscCall(PetscHSetIHas(label->ht[v], point, contains)); 954cffad2c9SToby Isaac } 955cffad2c9SToby Isaac } else { // value is not present 956cffad2c9SToby Isaac *contains = PETSC_FALSE; 957cffad2c9SToby Isaac } 958c58f1c22SToby Isaac } 9593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 960c58f1c22SToby Isaac } 961c58f1c22SToby Isaac 96284f0b6dfSMatthew G. Knepley /*@ 96320f4b53cSBarry Smith DMLabelGetDefaultValue - Get the default value returned by `DMLabelGetValue()` if a point has not been explicitly given a value. 9645aa44df4SToby Isaac When a label is created, it is initialized to -1. 9655aa44df4SToby Isaac 96620f4b53cSBarry Smith Not Collective 9675b5e7992SMatthew G. Knepley 96860225df5SJacob Faibussowitsch Input Parameter: 96920f4b53cSBarry Smith . label - a `DMLabel` object 9705aa44df4SToby Isaac 97160225df5SJacob Faibussowitsch Output Parameter: 9725aa44df4SToby Isaac . defaultValue - the default value 9735aa44df4SToby Isaac 9745aa44df4SToby Isaac Level: beginner 9755aa44df4SToby Isaac 97620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelSetDefaultValue()`, `DMLabelGetValue()`, `DMLabelSetValue()` 97784f0b6dfSMatthew G. Knepley @*/ 978d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetDefaultValue(DMLabel label, PetscInt *defaultValue) 979d71ae5a4SJacob Faibussowitsch { 9805aa44df4SToby Isaac PetscFunctionBegin; 981d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 9825aa44df4SToby Isaac *defaultValue = label->defaultValue; 9833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9845aa44df4SToby Isaac } 9855aa44df4SToby Isaac 98684f0b6dfSMatthew G. Knepley /*@ 98720f4b53cSBarry Smith DMLabelSetDefaultValue - Set the default value returned by `DMLabelGetValue()` if a point has not been explicitly given a value. 9885aa44df4SToby Isaac When a label is created, it is initialized to -1. 9895aa44df4SToby Isaac 99020f4b53cSBarry Smith Not Collective 9915b5e7992SMatthew G. Knepley 99260225df5SJacob Faibussowitsch Input Parameter: 99320f4b53cSBarry Smith . label - a `DMLabel` object 9945aa44df4SToby Isaac 99560225df5SJacob Faibussowitsch Output Parameter: 9965aa44df4SToby Isaac . defaultValue - the default value 9975aa44df4SToby Isaac 9985aa44df4SToby Isaac Level: beginner 9995aa44df4SToby Isaac 100020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetDefaultValue()`, `DMLabelGetValue()`, `DMLabelSetValue()` 100184f0b6dfSMatthew G. Knepley @*/ 1002d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetDefaultValue(DMLabel label, PetscInt defaultValue) 1003d71ae5a4SJacob Faibussowitsch { 10045aa44df4SToby Isaac PetscFunctionBegin; 1005d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10065aa44df4SToby Isaac label->defaultValue = defaultValue; 10073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10085aa44df4SToby Isaac } 10095aa44df4SToby Isaac 1010c58f1c22SToby Isaac /*@ 101120f4b53cSBarry Smith DMLabelGetValue - Return the value a label assigns to a point, or the label's default value (which is initially -1, and can be changed with 101220f4b53cSBarry Smith `DMLabelSetDefaultValue()`) 1013c58f1c22SToby Isaac 101420f4b53cSBarry Smith Not Collective 10155b5e7992SMatthew G. Knepley 1016c58f1c22SToby Isaac Input Parameters: 101720f4b53cSBarry Smith + label - the `DMLabel` 1018c58f1c22SToby Isaac - point - the point 1019c58f1c22SToby Isaac 1020c58f1c22SToby Isaac Output Parameter: 10218e68afcfSMatthew G. Knepley . value - The point value, or the default value (-1 by default) 1022c58f1c22SToby Isaac 1023c58f1c22SToby Isaac Level: intermediate 1024c58f1c22SToby Isaac 102520f4b53cSBarry Smith Note: 102620f4b53cSBarry Smith A label may assign multiple values to a point. No guarantees are made about which value is returned in that case. 102720f4b53cSBarry Smith Use `DMLabelStratumHasPoint()` to check for inclusion in a specific value stratum. 102820f4b53cSBarry Smith 102920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetValue()`, `DMLabelClearValue()`, `DMLabelGetDefaultValue()`, `DMLabelSetDefaultValue()` 1030c58f1c22SToby Isaac @*/ 1031d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValue(DMLabel label, PetscInt point, PetscInt *value) 1032d71ae5a4SJacob Faibussowitsch { 1033c58f1c22SToby Isaac PetscInt v; 1034c58f1c22SToby Isaac 10350c3c4a36SLisandro Dalcin PetscFunctionBeginHot; 1036d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10374f572ea9SToby Isaac PetscAssertPointer(value, 3); 10385aa44df4SToby Isaac *value = label->defaultValue; 1039c58f1c22SToby Isaac for (v = 0; v < label->numStrata; ++v) { 10409f6c5813SMatthew G. Knepley if (label->validIS[v] || label->readonly) { 10419f6c5813SMatthew G. Knepley IS is; 1042c58f1c22SToby Isaac PetscInt i; 1043c58f1c22SToby Isaac 10449f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 10459566063dSJacob Faibussowitsch PetscCall(ISLocate(label->points[v], point, &i)); 10469f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 1047c58f1c22SToby Isaac if (i >= 0) { 1048c58f1c22SToby Isaac *value = label->stratumValues[v]; 1049c58f1c22SToby Isaac break; 1050c58f1c22SToby Isaac } 1051c58f1c22SToby Isaac } else { 1052c58f1c22SToby Isaac PetscBool has; 1053c58f1c22SToby Isaac 10549566063dSJacob Faibussowitsch PetscCall(PetscHSetIHas(label->ht[v], point, &has)); 1055c58f1c22SToby Isaac if (has) { 1056c58f1c22SToby Isaac *value = label->stratumValues[v]; 1057c58f1c22SToby Isaac break; 1058c58f1c22SToby Isaac } 1059c58f1c22SToby Isaac } 1060c58f1c22SToby Isaac } 10613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1062c58f1c22SToby Isaac } 1063c58f1c22SToby Isaac 1064c58f1c22SToby Isaac /*@ 106520f4b53cSBarry Smith DMLabelSetValue - Set the value a label assigns to a point. If the value is the same as the label's default value (which is initially -1, and can 106620f4b53cSBarry Smith be changed with `DMLabelSetDefaultValue()` to something different), then this function will do nothing. 1067c58f1c22SToby Isaac 106820f4b53cSBarry Smith Not Collective 10695b5e7992SMatthew G. Knepley 1070c58f1c22SToby Isaac Input Parameters: 107120f4b53cSBarry Smith + label - the `DMLabel` 1072c58f1c22SToby Isaac . point - the point 1073c58f1c22SToby Isaac - value - The point value 1074c58f1c22SToby Isaac 1075c58f1c22SToby Isaac Level: intermediate 1076c58f1c22SToby Isaac 107720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelClearValue()`, `DMLabelGetDefaultValue()`, `DMLabelSetDefaultValue()` 1078c58f1c22SToby Isaac @*/ 1079d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetValue(DMLabel label, PetscInt point, PetscInt value) 1080d71ae5a4SJacob Faibussowitsch { 1081c58f1c22SToby Isaac PetscInt v; 1082c58f1c22SToby Isaac 1083c58f1c22SToby Isaac PetscFunctionBegin; 1084d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 10850c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 10863ba16761SJacob Faibussowitsch if (value == label->defaultValue) PetscFunctionReturn(PETSC_SUCCESS); 10879f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 10889566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 1089c58f1c22SToby Isaac /* Set key */ 10909566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 10919566063dSJacob Faibussowitsch PetscCall(PetscHSetIAdd(label->ht[v], point)); 10923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1093c58f1c22SToby Isaac } 1094c58f1c22SToby Isaac 1095c58f1c22SToby Isaac /*@ 1096c58f1c22SToby Isaac DMLabelClearValue - Clear the value a label assigns to a point 1097c58f1c22SToby Isaac 109820f4b53cSBarry Smith Not Collective 10995b5e7992SMatthew G. Knepley 1100c58f1c22SToby Isaac Input Parameters: 110120f4b53cSBarry Smith + label - the `DMLabel` 1102c58f1c22SToby Isaac . point - the point 1103c58f1c22SToby Isaac - value - The point value 1104c58f1c22SToby Isaac 1105c58f1c22SToby Isaac Level: intermediate 1106c58f1c22SToby Isaac 110720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()` 1108c58f1c22SToby Isaac @*/ 1109d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelClearValue(DMLabel label, PetscInt point, PetscInt value) 1110d71ae5a4SJacob Faibussowitsch { 1111ad8374ffSToby Isaac PetscInt v; 1112c58f1c22SToby Isaac 1113c58f1c22SToby Isaac PetscFunctionBegin; 1114d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 11159f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 1116c58f1c22SToby Isaac /* Find label value */ 11179566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 11183ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 11190c3c4a36SLisandro Dalcin 1120eeed21e7SToby Isaac if (label->bt) { 112163a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 11229566063dSJacob Faibussowitsch PetscCall(PetscBTClear(label->bt, point - label->pStart)); 1123eeed21e7SToby Isaac } 11240c3c4a36SLisandro Dalcin 11250c3c4a36SLisandro Dalcin /* Delete key */ 11269566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 11279566063dSJacob Faibussowitsch PetscCall(PetscHSetIDel(label->ht[v], point)); 11283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1129c58f1c22SToby Isaac } 1130c58f1c22SToby Isaac 1131c58f1c22SToby Isaac /*@ 113220f4b53cSBarry Smith DMLabelInsertIS - Set all points in the `IS` to a value 1133c58f1c22SToby Isaac 113420f4b53cSBarry Smith Not Collective 11355b5e7992SMatthew G. Knepley 1136c58f1c22SToby Isaac Input Parameters: 113720f4b53cSBarry Smith + label - the `DMLabel` 11382fe279fdSBarry Smith . is - the point `IS` 1139c58f1c22SToby Isaac - value - The point value 1140c58f1c22SToby Isaac 1141c58f1c22SToby Isaac Level: intermediate 1142c58f1c22SToby Isaac 114320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 1144c58f1c22SToby Isaac @*/ 1145d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelInsertIS(DMLabel label, IS is, PetscInt value) 1146d71ae5a4SJacob Faibussowitsch { 11470c3c4a36SLisandro Dalcin PetscInt v, n, p; 1148c58f1c22SToby Isaac const PetscInt *points; 1149c58f1c22SToby Isaac 1150c58f1c22SToby Isaac PetscFunctionBegin; 1151d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1152c58f1c22SToby Isaac PetscValidHeaderSpecific(is, IS_CLASSID, 2); 11530c3c4a36SLisandro Dalcin /* Find label value, add new entry if needed */ 11543ba16761SJacob Faibussowitsch if (value == label->defaultValue) PetscFunctionReturn(PETSC_SUCCESS); 11559f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 11569566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 11570c3c4a36SLisandro Dalcin /* Set keys */ 11589566063dSJacob Faibussowitsch PetscCall(DMLabelMakeInvalid_Private(label, v)); 11599566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is, &n)); 11609566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &points)); 11619566063dSJacob Faibussowitsch for (p = 0; p < n; ++p) PetscCall(PetscHSetIAdd(label->ht[v], points[p])); 11629566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &points)); 11633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1164c58f1c22SToby Isaac } 1165c58f1c22SToby Isaac 116684f0b6dfSMatthew G. Knepley /*@ 116720f4b53cSBarry Smith DMLabelGetNumValues - Get the number of values that the `DMLabel` takes 116884f0b6dfSMatthew G. Knepley 116920f4b53cSBarry Smith Not Collective 11705b5e7992SMatthew G. Knepley 117184f0b6dfSMatthew G. Knepley Input Parameter: 117220f4b53cSBarry Smith . label - the `DMLabel` 117384f0b6dfSMatthew G. Knepley 117401d2d390SJose E. Roman Output Parameter: 117584f0b6dfSMatthew G. Knepley . numValues - the number of values 117684f0b6dfSMatthew G. Knepley 117784f0b6dfSMatthew G. Knepley Level: intermediate 117884f0b6dfSMatthew G. Knepley 117920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 118084f0b6dfSMatthew G. Knepley @*/ 1181d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetNumValues(DMLabel label, PetscInt *numValues) 1182d71ae5a4SJacob Faibussowitsch { 1183c58f1c22SToby Isaac PetscFunctionBegin; 1184d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 11854f572ea9SToby Isaac PetscAssertPointer(numValues, 2); 1186c58f1c22SToby Isaac *numValues = label->numStrata; 11873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1188c58f1c22SToby Isaac } 1189c58f1c22SToby Isaac 119084f0b6dfSMatthew G. Knepley /*@ 119120f4b53cSBarry Smith DMLabelGetValueIS - Get an `IS` of all values that the `DMlabel` takes 119284f0b6dfSMatthew G. Knepley 119320f4b53cSBarry Smith Not Collective 11945b5e7992SMatthew G. Knepley 119584f0b6dfSMatthew G. Knepley Input Parameter: 119620f4b53cSBarry Smith . label - the `DMLabel` 119784f0b6dfSMatthew G. Knepley 119801d2d390SJose E. Roman Output Parameter: 119960225df5SJacob Faibussowitsch . values - the value `IS` 120084f0b6dfSMatthew G. Knepley 120184f0b6dfSMatthew G. Knepley Level: intermediate 120284f0b6dfSMatthew G. Knepley 12031d04cbbeSVaclav Hapla Notes: 120420f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 120520f4b53cSBarry Smith Strata which are allocated but empty [`DMLabelGetStratumSize()` yields 0] are counted. 120620f4b53cSBarry Smith If you need to count only nonempty strata, use `DMLabelGetNonEmptyStratumValuesIS()`. 12071d04cbbeSVaclav Hapla 120820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetNonEmptyStratumValuesIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 120984f0b6dfSMatthew G. Knepley @*/ 1210d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValueIS(DMLabel label, IS *values) 1211d71ae5a4SJacob Faibussowitsch { 1212c58f1c22SToby Isaac PetscFunctionBegin; 1213d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12144f572ea9SToby Isaac PetscAssertPointer(values, 2); 12159566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values)); 12163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1217c58f1c22SToby Isaac } 1218c58f1c22SToby Isaac 121984f0b6dfSMatthew G. Knepley /*@ 12208696263dSMatthew G. Knepley DMLabelGetValueBounds - Return the smallest and largest value in the label 12218696263dSMatthew G. Knepley 12228696263dSMatthew G. Knepley Not Collective 12238696263dSMatthew G. Knepley 12248696263dSMatthew G. Knepley Input Parameter: 12258696263dSMatthew G. Knepley . label - the `DMLabel` 12268696263dSMatthew G. Knepley 12278696263dSMatthew G. Knepley Output Parameters: 12288696263dSMatthew G. Knepley + minValue - The smallest value 12298696263dSMatthew G. Knepley - maxValue - The largest value 12308696263dSMatthew G. Knepley 12318696263dSMatthew G. Knepley Level: intermediate 12328696263dSMatthew G. Knepley 12338696263dSMatthew G. Knepley .seealso: `DMLabel`, `DM`, `DMLabelGetBounds()`, `DMLabelGetValue()`, `DMLabelSetValue()` 12348696263dSMatthew G. Knepley @*/ 12358696263dSMatthew G. Knepley PetscErrorCode DMLabelGetValueBounds(DMLabel label, PetscInt *minValue, PetscInt *maxValue) 12368696263dSMatthew G. Knepley { 12378696263dSMatthew G. Knepley PetscInt min = PETSC_MAX_INT, max = PETSC_MIN_INT; 12388696263dSMatthew G. Knepley 12398696263dSMatthew G. Knepley PetscFunctionBegin; 12408696263dSMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12418696263dSMatthew G. Knepley for (PetscInt v = 0; v < label->numStrata; ++v) { 12428696263dSMatthew G. Knepley min = PetscMin(min, label->stratumValues[v]); 12438696263dSMatthew G. Knepley max = PetscMax(max, label->stratumValues[v]); 12448696263dSMatthew G. Knepley } 12458696263dSMatthew G. Knepley if (minValue) { 12468696263dSMatthew G. Knepley PetscAssertPointer(minValue, 2); 12478696263dSMatthew G. Knepley *minValue = min; 12488696263dSMatthew G. Knepley } 12498696263dSMatthew G. Knepley if (maxValue) { 12508696263dSMatthew G. Knepley PetscAssertPointer(maxValue, 3); 12518696263dSMatthew G. Knepley *maxValue = max; 12528696263dSMatthew G. Knepley } 12538696263dSMatthew G. Knepley PetscFunctionReturn(PETSC_SUCCESS); 12548696263dSMatthew G. Knepley } 12558696263dSMatthew G. Knepley 12568696263dSMatthew G. Knepley /*@ 125720f4b53cSBarry Smith DMLabelGetNonEmptyStratumValuesIS - Get an `IS` of all values that the `DMlabel` takes 12581d04cbbeSVaclav Hapla 125920f4b53cSBarry Smith Not Collective 12601d04cbbeSVaclav Hapla 12611d04cbbeSVaclav Hapla Input Parameter: 126220f4b53cSBarry Smith . label - the `DMLabel` 12631d04cbbeSVaclav Hapla 1264d5b43468SJose E. Roman Output Parameter: 126560225df5SJacob Faibussowitsch . values - the value `IS` 12661d04cbbeSVaclav Hapla 12671d04cbbeSVaclav Hapla Level: intermediate 12681d04cbbeSVaclav Hapla 12691d04cbbeSVaclav Hapla Notes: 127020f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 127120f4b53cSBarry Smith This is similar to `DMLabelGetValueIS()` but counts only nonempty strata. 12721d04cbbeSVaclav Hapla 127320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 12741d04cbbeSVaclav Hapla @*/ 1275d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetNonEmptyStratumValuesIS(DMLabel label, IS *values) 1276d71ae5a4SJacob Faibussowitsch { 12771d04cbbeSVaclav Hapla PetscInt i, j; 12781d04cbbeSVaclav Hapla PetscInt *valuesArr; 12791d04cbbeSVaclav Hapla 12801d04cbbeSVaclav Hapla PetscFunctionBegin; 12811d04cbbeSVaclav Hapla PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 12824f572ea9SToby Isaac PetscAssertPointer(values, 2); 12839566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(label->numStrata, &valuesArr)); 12841d04cbbeSVaclav Hapla for (i = 0, j = 0; i < label->numStrata; i++) { 12851d04cbbeSVaclav Hapla PetscInt n; 12861d04cbbeSVaclav Hapla 12879566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(label, i, &n)); 12881d04cbbeSVaclav Hapla if (n) valuesArr[j++] = label->stratumValues[i]; 12891d04cbbeSVaclav Hapla } 12901d04cbbeSVaclav Hapla if (j == label->numStrata) { 12919566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, label->numStrata, label->stratumValues, PETSC_USE_POINTER, values)); 12921d04cbbeSVaclav Hapla } else { 12939566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, j, valuesArr, PETSC_COPY_VALUES, values)); 12941d04cbbeSVaclav Hapla } 12959566063dSJacob Faibussowitsch PetscCall(PetscFree(valuesArr)); 12963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12971d04cbbeSVaclav Hapla } 12981d04cbbeSVaclav Hapla 12991d04cbbeSVaclav Hapla /*@ 130020f4b53cSBarry Smith DMLabelGetValueIndex - Get the index of a given value in the list of values for the `DMlabel`, or -1 if it is not present 1301d123abd9SMatthew G. Knepley 130220f4b53cSBarry Smith Not Collective 1303d123abd9SMatthew G. Knepley 1304d123abd9SMatthew G. Knepley Input Parameters: 130520f4b53cSBarry Smith + label - the `DMLabel` 130697bb3fdcSJose E. Roman - value - the value 1307d123abd9SMatthew G. Knepley 130801d2d390SJose E. Roman Output Parameter: 1309d123abd9SMatthew G. Knepley . index - the index of value in the list of values 1310d123abd9SMatthew G. Knepley 1311d123abd9SMatthew G. Knepley Level: intermediate 1312d123abd9SMatthew G. Knepley 131320f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIS()`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 1314d123abd9SMatthew G. Knepley @*/ 1315d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetValueIndex(DMLabel label, PetscInt value, PetscInt *index) 1316d71ae5a4SJacob Faibussowitsch { 1317d123abd9SMatthew G. Knepley PetscInt v; 1318d123abd9SMatthew G. Knepley 1319d123abd9SMatthew G. Knepley PetscFunctionBegin; 1320d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13214f572ea9SToby Isaac PetscAssertPointer(index, 3); 1322d123abd9SMatthew G. Knepley /* Do not assume they are sorted */ 13239371c9d4SSatish Balay for (v = 0; v < label->numStrata; ++v) 13249371c9d4SSatish Balay if (label->stratumValues[v] == value) break; 1325d123abd9SMatthew G. Knepley if (v >= label->numStrata) *index = -1; 1326d123abd9SMatthew G. Knepley else *index = v; 13273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1328d123abd9SMatthew G. Knepley } 1329d123abd9SMatthew G. Knepley 1330d123abd9SMatthew G. Knepley /*@ 133184f0b6dfSMatthew G. Knepley DMLabelHasStratum - Determine whether points exist with the given value 133284f0b6dfSMatthew G. Knepley 133320f4b53cSBarry Smith Not Collective 13345b5e7992SMatthew G. Knepley 133584f0b6dfSMatthew G. Knepley Input Parameters: 133620f4b53cSBarry Smith + label - the `DMLabel` 133784f0b6dfSMatthew G. Knepley - value - the stratum value 133884f0b6dfSMatthew G. Knepley 133901d2d390SJose E. Roman Output Parameter: 134084f0b6dfSMatthew G. Knepley . exists - Flag saying whether points exist 134184f0b6dfSMatthew G. Knepley 134284f0b6dfSMatthew G. Knepley Level: intermediate 134384f0b6dfSMatthew G. Knepley 134420f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 134584f0b6dfSMatthew G. Knepley @*/ 1346d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelHasStratum(DMLabel label, PetscInt value, PetscBool *exists) 1347d71ae5a4SJacob Faibussowitsch { 1348fada774cSMatthew G. Knepley PetscInt v; 1349fada774cSMatthew G. Knepley 1350fada774cSMatthew G. Knepley PetscFunctionBegin; 1351d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13524f572ea9SToby Isaac PetscAssertPointer(exists, 3); 13539566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 13540c3c4a36SLisandro Dalcin *exists = v < 0 ? PETSC_FALSE : PETSC_TRUE; 13553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1356fada774cSMatthew G. Knepley } 1357fada774cSMatthew G. Knepley 135884f0b6dfSMatthew G. Knepley /*@ 135984f0b6dfSMatthew G. Knepley DMLabelGetStratumSize - Get the size of a stratum 136084f0b6dfSMatthew G. Knepley 136120f4b53cSBarry Smith Not Collective 13625b5e7992SMatthew G. Knepley 136384f0b6dfSMatthew G. Knepley Input Parameters: 136420f4b53cSBarry Smith + label - the `DMLabel` 136584f0b6dfSMatthew G. Knepley - value - the stratum value 136684f0b6dfSMatthew G. Knepley 136701d2d390SJose E. Roman Output Parameter: 136884f0b6dfSMatthew G. Knepley . size - The number of points in the stratum 136984f0b6dfSMatthew G. Knepley 137084f0b6dfSMatthew G. Knepley Level: intermediate 137184f0b6dfSMatthew G. Knepley 137220f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 137384f0b6dfSMatthew G. Knepley @*/ 1374d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumSize(DMLabel label, PetscInt value, PetscInt *size) 1375d71ae5a4SJacob Faibussowitsch { 1376c58f1c22SToby Isaac PetscInt v; 1377c58f1c22SToby Isaac 1378c58f1c22SToby Isaac PetscFunctionBegin; 1379d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 13804f572ea9SToby Isaac PetscAssertPointer(size, 3); 13819566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 13829566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize_Private(label, v, size)); 13833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1384c58f1c22SToby Isaac } 1385c58f1c22SToby Isaac 138684f0b6dfSMatthew G. Knepley /*@ 138784f0b6dfSMatthew G. Knepley DMLabelGetStratumBounds - Get the largest and smallest point of a stratum 138884f0b6dfSMatthew G. Knepley 138920f4b53cSBarry Smith Not Collective 13905b5e7992SMatthew G. Knepley 139184f0b6dfSMatthew G. Knepley Input Parameters: 139220f4b53cSBarry Smith + label - the `DMLabel` 139384f0b6dfSMatthew G. Knepley - value - the stratum value 139484f0b6dfSMatthew G. Knepley 139501d2d390SJose E. Roman Output Parameters: 139684f0b6dfSMatthew G. Knepley + start - the smallest point in the stratum 139784f0b6dfSMatthew G. Knepley - end - the largest point in the stratum 139884f0b6dfSMatthew G. Knepley 139984f0b6dfSMatthew G. Knepley Level: intermediate 140084f0b6dfSMatthew G. Knepley 140120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 140284f0b6dfSMatthew G. Knepley @*/ 1403d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumBounds(DMLabel label, PetscInt value, PetscInt *start, PetscInt *end) 1404d71ae5a4SJacob Faibussowitsch { 14059f6c5813SMatthew G. Knepley IS is; 14060c3c4a36SLisandro Dalcin PetscInt v, min, max; 1407c58f1c22SToby Isaac 1408c58f1c22SToby Isaac PetscFunctionBegin; 1409d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 14109371c9d4SSatish Balay if (start) { 14114f572ea9SToby Isaac PetscAssertPointer(start, 3); 14129371c9d4SSatish Balay *start = -1; 14139371c9d4SSatish Balay } 14149371c9d4SSatish Balay if (end) { 14154f572ea9SToby Isaac PetscAssertPointer(end, 4); 14169371c9d4SSatish Balay *end = -1; 14179371c9d4SSatish Balay } 14189566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 14193ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 14209566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 14213ba16761SJacob Faibussowitsch if (label->stratumSizes[v] <= 0) PetscFunctionReturn(PETSC_SUCCESS); 14229f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &is); 14239f6c5813SMatthew G. Knepley PetscCall(ISGetMinMax(is, &min, &max)); 14249f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&is)); 1425d6cb179aSToby Isaac if (start) *start = min; 1426d6cb179aSToby Isaac if (end) *end = max + 1; 14273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1428c58f1c22SToby Isaac } 1429c58f1c22SToby Isaac 143066976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelGetStratumIS_Concrete(DMLabel label, PetscInt v, IS *pointIS) 14319f6c5813SMatthew G. Knepley { 14329f6c5813SMatthew G. Knepley PetscFunctionBegin; 14339f6c5813SMatthew G. Knepley PetscCall(PetscObjectReference((PetscObject)label->points[v])); 14349f6c5813SMatthew G. Knepley *pointIS = label->points[v]; 14353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14369f6c5813SMatthew G. Knepley } 14379f6c5813SMatthew G. Knepley 143884f0b6dfSMatthew G. Knepley /*@ 143920f4b53cSBarry Smith DMLabelGetStratumIS - Get an `IS` with the stratum points 144084f0b6dfSMatthew G. Knepley 144120f4b53cSBarry Smith Not Collective 14425b5e7992SMatthew G. Knepley 144384f0b6dfSMatthew G. Knepley Input Parameters: 144420f4b53cSBarry Smith + label - the `DMLabel` 144584f0b6dfSMatthew G. Knepley - value - the stratum value 144684f0b6dfSMatthew G. Knepley 144701d2d390SJose E. Roman Output Parameter: 144884f0b6dfSMatthew G. Knepley . points - The stratum points 144984f0b6dfSMatthew G. Knepley 145084f0b6dfSMatthew G. Knepley Level: intermediate 145184f0b6dfSMatthew G. Knepley 1452593ce467SVaclav Hapla Notes: 145320f4b53cSBarry Smith The output `IS` should be destroyed when no longer needed. 145420f4b53cSBarry Smith Returns `NULL` if the stratum is empty. 1455593ce467SVaclav Hapla 145620f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 145784f0b6dfSMatthew G. Knepley @*/ 1458d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumIS(DMLabel label, PetscInt value, IS *points) 1459d71ae5a4SJacob Faibussowitsch { 1460c58f1c22SToby Isaac PetscInt v; 1461c58f1c22SToby Isaac 1462c58f1c22SToby Isaac PetscFunctionBegin; 1463d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 14644f572ea9SToby Isaac PetscAssertPointer(points, 3); 1465c58f1c22SToby Isaac *points = NULL; 14669566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 14673ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 14689566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 14699f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, points); 14703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1471c58f1c22SToby Isaac } 1472c58f1c22SToby Isaac 147384f0b6dfSMatthew G. Knepley /*@ 147420f4b53cSBarry Smith DMLabelSetStratumIS - Set the stratum points using an `IS` 147584f0b6dfSMatthew G. Knepley 147620f4b53cSBarry Smith Not Collective 14775b5e7992SMatthew G. Knepley 147884f0b6dfSMatthew G. Knepley Input Parameters: 147920f4b53cSBarry Smith + label - the `DMLabel` 148084f0b6dfSMatthew G. Knepley . value - the stratum value 148160225df5SJacob Faibussowitsch - is - The stratum points 148284f0b6dfSMatthew G. Knepley 148384f0b6dfSMatthew G. Knepley Level: intermediate 148484f0b6dfSMatthew G. Knepley 148520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 148684f0b6dfSMatthew G. Knepley @*/ 1487d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetStratumIS(DMLabel label, PetscInt value, IS is) 1488d71ae5a4SJacob Faibussowitsch { 14890c3c4a36SLisandro Dalcin PetscInt v; 14904de306b1SToby Isaac 14914de306b1SToby Isaac PetscFunctionBegin; 1492d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1493d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(is, IS_CLASSID, 3); 14949f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 14959566063dSJacob Faibussowitsch PetscCall(DMLabelLookupAddStratum(label, value, &v)); 14963ba16761SJacob Faibussowitsch if (is == label->points[v]) PetscFunctionReturn(PETSC_SUCCESS); 14979566063dSJacob Faibussowitsch PetscCall(DMLabelClearStratum(label, value)); 1498f4f49eeaSPierre Jolivet PetscCall(ISGetLocalSize(is, &label->stratumSizes[v])); 14999566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)is)); 1500f4f49eeaSPierre Jolivet PetscCall(ISDestroy(&label->points[v])); 15010c3c4a36SLisandro Dalcin label->points[v] = is; 15020c3c4a36SLisandro Dalcin label->validIS[v] = PETSC_TRUE; 15039566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 15044de306b1SToby Isaac if (label->bt) { 15054de306b1SToby Isaac const PetscInt *points; 15064de306b1SToby Isaac PetscInt p; 15074de306b1SToby Isaac 15089566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &points)); 15094de306b1SToby Isaac for (p = 0; p < label->stratumSizes[v]; ++p) { 15104de306b1SToby Isaac const PetscInt point = points[p]; 15114de306b1SToby Isaac 151263a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 15139566063dSJacob Faibussowitsch PetscCall(PetscBTSet(label->bt, point - label->pStart)); 15144de306b1SToby Isaac } 15154de306b1SToby Isaac } 15163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15174de306b1SToby Isaac } 15184de306b1SToby Isaac 151984f0b6dfSMatthew G. Knepley /*@ 152084f0b6dfSMatthew G. Knepley DMLabelClearStratum - Remove a stratum 15214de306b1SToby Isaac 152220f4b53cSBarry Smith Not Collective 15235b5e7992SMatthew G. Knepley 152484f0b6dfSMatthew G. Knepley Input Parameters: 152520f4b53cSBarry Smith + label - the `DMLabel` 152684f0b6dfSMatthew G. Knepley - value - the stratum value 152784f0b6dfSMatthew G. Knepley 152884f0b6dfSMatthew G. Knepley Level: intermediate 152984f0b6dfSMatthew G. Knepley 153020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 153184f0b6dfSMatthew G. Knepley @*/ 1532d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelClearStratum(DMLabel label, PetscInt value) 1533d71ae5a4SJacob Faibussowitsch { 1534c58f1c22SToby Isaac PetscInt v; 1535c58f1c22SToby Isaac 1536c58f1c22SToby Isaac PetscFunctionBegin; 1537d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 15389f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 15399566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 15403ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 15414de306b1SToby Isaac if (label->validIS[v]) { 15424de306b1SToby Isaac if (label->bt) { 1543c58f1c22SToby Isaac PetscInt i; 1544ad8374ffSToby Isaac const PetscInt *points; 1545c58f1c22SToby Isaac 15469566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[v], &points)); 1547c58f1c22SToby Isaac for (i = 0; i < label->stratumSizes[v]; ++i) { 1548ad8374ffSToby Isaac const PetscInt point = points[i]; 1549c58f1c22SToby Isaac 155063a3b9bcSJacob Faibussowitsch PetscCheck(!(point < label->pStart) && !(point >= label->pEnd), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [%" PetscInt_FMT ", %" PetscInt_FMT ")", point, label->pStart, label->pEnd); 15519566063dSJacob Faibussowitsch PetscCall(PetscBTClear(label->bt, point - label->pStart)); 1552c58f1c22SToby Isaac } 15539566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[v], &points)); 1554c58f1c22SToby Isaac } 1555c58f1c22SToby Isaac label->stratumSizes[v] = 0; 15569566063dSJacob Faibussowitsch PetscCall(ISDestroy(&label->points[v])); 15579566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, 0, 0, 1, &label->points[v])); 15589566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)label->points[v], "indices")); 15599566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)label)); 1560c58f1c22SToby Isaac } else { 15619566063dSJacob Faibussowitsch PetscCall(PetscHSetIClear(label->ht[v])); 1562c58f1c22SToby Isaac } 15633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1564c58f1c22SToby Isaac } 1565c58f1c22SToby Isaac 156684f0b6dfSMatthew G. Knepley /*@ 1567412e9a14SMatthew G. Knepley DMLabelSetStratumBounds - Efficiently give a contiguous set of points a given label value 1568412e9a14SMatthew G. Knepley 156920f4b53cSBarry Smith Not Collective 1570412e9a14SMatthew G. Knepley 1571412e9a14SMatthew G. Knepley Input Parameters: 157220f4b53cSBarry Smith + label - The `DMLabel` 1573412e9a14SMatthew G. Knepley . value - The label value for all points 1574412e9a14SMatthew G. Knepley . pStart - The first point 1575412e9a14SMatthew G. Knepley - pEnd - A point beyond all marked points 1576412e9a14SMatthew G. Knepley 1577412e9a14SMatthew G. Knepley Level: intermediate 1578412e9a14SMatthew G. Knepley 157920f4b53cSBarry Smith Note: 158020f4b53cSBarry Smith The marks points are [`pStart`, `pEnd`), and only the bounds are stored. 158120f4b53cSBarry Smith 158220f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelSetStratumIS()`, `DMLabelGetStratumIS()` 1583412e9a14SMatthew G. Knepley @*/ 1584d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelSetStratumBounds(DMLabel label, PetscInt value, PetscInt pStart, PetscInt pEnd) 1585d71ae5a4SJacob Faibussowitsch { 1586412e9a14SMatthew G. Knepley IS pIS; 1587412e9a14SMatthew G. Knepley 1588412e9a14SMatthew G. Knepley PetscFunctionBegin; 15899566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, pEnd - pStart, pStart, 1, &pIS)); 15909566063dSJacob Faibussowitsch PetscCall(DMLabelSetStratumIS(label, value, pIS)); 15919566063dSJacob Faibussowitsch PetscCall(ISDestroy(&pIS)); 15923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1593412e9a14SMatthew G. Knepley } 1594412e9a14SMatthew G. Knepley 1595412e9a14SMatthew G. Knepley /*@ 1596d123abd9SMatthew G. Knepley DMLabelGetStratumPointIndex - Get the index of a point in a given stratum 1597d123abd9SMatthew G. Knepley 159820f4b53cSBarry Smith Not Collective 1599d123abd9SMatthew G. Knepley 1600d123abd9SMatthew G. Knepley Input Parameters: 160120f4b53cSBarry Smith + label - The `DMLabel` 1602d123abd9SMatthew G. Knepley . value - The label value 1603d123abd9SMatthew G. Knepley - p - A point with this value 1604d123abd9SMatthew G. Knepley 1605d123abd9SMatthew G. Knepley Output Parameter: 1606d123abd9SMatthew G. Knepley . index - The index of this point in the stratum, or -1 if the point is not in the stratum or the stratum does not exist 1607d123abd9SMatthew G. Knepley 1608d123abd9SMatthew G. Knepley Level: intermediate 1609d123abd9SMatthew G. Knepley 161020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetValueIndex()`, `DMLabelGetStratumIS()`, `DMLabelCreate()` 1611d123abd9SMatthew G. Knepley @*/ 1612d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGetStratumPointIndex(DMLabel label, PetscInt value, PetscInt p, PetscInt *index) 1613d71ae5a4SJacob Faibussowitsch { 16149f6c5813SMatthew G. Knepley IS pointIS; 1615d123abd9SMatthew G. Knepley const PetscInt *indices; 1616d123abd9SMatthew G. Knepley PetscInt v; 1617d123abd9SMatthew G. Knepley 1618d123abd9SMatthew G. Knepley PetscFunctionBegin; 1619d123abd9SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 16204f572ea9SToby Isaac PetscAssertPointer(index, 4); 1621d123abd9SMatthew G. Knepley *index = -1; 16229566063dSJacob Faibussowitsch PetscCall(DMLabelLookupStratum(label, value, &v)); 16233ba16761SJacob Faibussowitsch if (v < 0) PetscFunctionReturn(PETSC_SUCCESS); 16249566063dSJacob Faibussowitsch PetscCall(DMLabelMakeValid_Private(label, v)); 16259f6c5813SMatthew G. Knepley PetscUseTypeMethod(label, getstratumis, v, &pointIS); 16269f6c5813SMatthew G. Knepley PetscCall(ISGetIndices(pointIS, &indices)); 16279566063dSJacob Faibussowitsch PetscCall(PetscFindInt(p, label->stratumSizes[v], indices, index)); 16289f6c5813SMatthew G. Knepley PetscCall(ISRestoreIndices(pointIS, &indices)); 16299f6c5813SMatthew G. Knepley PetscCall(ISDestroy(&pointIS)); 16303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1631d123abd9SMatthew G. Knepley } 1632d123abd9SMatthew G. Knepley 1633d123abd9SMatthew G. Knepley /*@ 163420f4b53cSBarry Smith DMLabelFilter - Remove all points outside of [`start`, `end`) 163584f0b6dfSMatthew G. Knepley 163620f4b53cSBarry Smith Not Collective 16375b5e7992SMatthew G. Knepley 163884f0b6dfSMatthew G. Knepley Input Parameters: 163920f4b53cSBarry Smith + label - the `DMLabel` 164022cd2cdaSVaclav Hapla . start - the first point kept 164122cd2cdaSVaclav Hapla - end - one more than the last point kept 164284f0b6dfSMatthew G. Knepley 164384f0b6dfSMatthew G. Knepley Level: intermediate 164484f0b6dfSMatthew G. Knepley 164520f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 164684f0b6dfSMatthew G. Knepley @*/ 1647d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelFilter(DMLabel label, PetscInt start, PetscInt end) 1648d71ae5a4SJacob Faibussowitsch { 1649c58f1c22SToby Isaac PetscInt v; 1650c58f1c22SToby Isaac 1651c58f1c22SToby Isaac PetscFunctionBegin; 1652d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 16539f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 16549566063dSJacob Faibussowitsch PetscCall(DMLabelDestroyIndex(label)); 16559566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 16569f6c5813SMatthew G. Knepley for (v = 0; v < label->numStrata; ++v) { 16579f6c5813SMatthew G. Knepley PetscCall(ISGeneralFilter(label->points[v], start, end)); 16589f6c5813SMatthew G. Knepley PetscCall(ISGetLocalSize(label->points[v], &label->stratumSizes[v])); 16599f6c5813SMatthew G. Knepley } 16609566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, start, end)); 16613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1662c58f1c22SToby Isaac } 1663c58f1c22SToby Isaac 166484f0b6dfSMatthew G. Knepley /*@ 166584f0b6dfSMatthew G. Knepley DMLabelPermute - Create a new label with permuted points 166684f0b6dfSMatthew G. Knepley 166720f4b53cSBarry Smith Not Collective 16685b5e7992SMatthew G. Knepley 166984f0b6dfSMatthew G. Knepley Input Parameters: 167020f4b53cSBarry Smith + label - the `DMLabel` 167184f0b6dfSMatthew G. Knepley - permutation - the point permutation 167284f0b6dfSMatthew G. Knepley 167384f0b6dfSMatthew G. Knepley Output Parameter: 167460225df5SJacob Faibussowitsch . labelNew - the new label containing the permuted points 167584f0b6dfSMatthew G. Knepley 167684f0b6dfSMatthew G. Knepley Level: intermediate 167784f0b6dfSMatthew G. Knepley 167820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 167984f0b6dfSMatthew G. Knepley @*/ 1680d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPermute(DMLabel label, IS permutation, DMLabel *labelNew) 1681d71ae5a4SJacob Faibussowitsch { 1682c58f1c22SToby Isaac const PetscInt *perm; 1683c58f1c22SToby Isaac PetscInt numValues, numPoints, v, q; 1684c58f1c22SToby Isaac 1685c58f1c22SToby Isaac PetscFunctionBegin; 1686d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1687d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(permutation, IS_CLASSID, 2); 16889f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 16899566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 16909566063dSJacob Faibussowitsch PetscCall(DMLabelDuplicate(label, labelNew)); 16919566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(*labelNew, &numValues)); 16929566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(permutation, &numPoints)); 16939566063dSJacob Faibussowitsch PetscCall(ISGetIndices(permutation, &perm)); 1694c58f1c22SToby Isaac for (v = 0; v < numValues; ++v) { 1695c58f1c22SToby Isaac const PetscInt size = (*labelNew)->stratumSizes[v]; 1696ad8374ffSToby Isaac const PetscInt *points; 1697ad8374ffSToby Isaac PetscInt *pointsNew; 1698c58f1c22SToby Isaac 16999566063dSJacob Faibussowitsch PetscCall(ISGetIndices((*labelNew)->points[v], &points)); 17009f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1(size, &pointsNew)); 1701c58f1c22SToby Isaac for (q = 0; q < size; ++q) { 1702ad8374ffSToby Isaac const PetscInt point = points[q]; 1703c58f1c22SToby Isaac 170463a3b9bcSJacob Faibussowitsch PetscCheck(!(point < 0) && !(point >= numPoints), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Label point %" PetscInt_FMT " is not in [0, %" PetscInt_FMT ") for the remapping", point, numPoints); 1705ad8374ffSToby Isaac pointsNew[q] = perm[point]; 1706c58f1c22SToby Isaac } 17079566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices((*labelNew)->points[v], &points)); 17089566063dSJacob Faibussowitsch PetscCall(PetscSortInt(size, pointsNew)); 17099566063dSJacob Faibussowitsch PetscCall(ISDestroy(&((*labelNew)->points[v]))); 1710fa8e8ae5SToby Isaac if (size > 0 && pointsNew[size - 1] == pointsNew[0] + size - 1) { 17119566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, size, pointsNew[0], 1, &((*labelNew)->points[v]))); 17129566063dSJacob Faibussowitsch PetscCall(PetscFree(pointsNew)); 1713fa8e8ae5SToby Isaac } else { 17149566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, size, pointsNew, PETSC_OWN_POINTER, &((*labelNew)->points[v]))); 1715fa8e8ae5SToby Isaac } 17169566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((*labelNew)->points[v]), "indices")); 1717c58f1c22SToby Isaac } 17189566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(permutation, &perm)); 1719c58f1c22SToby Isaac if (label->bt) { 17209566063dSJacob Faibussowitsch PetscCall(PetscBTDestroy(&label->bt)); 17219566063dSJacob Faibussowitsch PetscCall(DMLabelCreateIndex(label, label->pStart, label->pEnd)); 1722c58f1c22SToby Isaac } 17233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1724c58f1c22SToby Isaac } 1725c58f1c22SToby Isaac 172666976f2fSJacob Faibussowitsch static PetscErrorCode DMLabelDistribute_Internal(DMLabel label, PetscSF sf, PetscSection *leafSection, PetscInt **leafStrata) 1727d71ae5a4SJacob Faibussowitsch { 172826c55118SMichael Lange MPI_Comm comm; 1729eb30be1eSVaclav Hapla PetscInt s, l, nroots, nleaves, offset, size; 173026c55118SMichael Lange PetscInt *remoteOffsets, *rootStrata, *rootIdx; 173126c55118SMichael Lange PetscSection rootSection; 173226c55118SMichael Lange PetscSF labelSF; 173326c55118SMichael Lange 173426c55118SMichael Lange PetscFunctionBegin; 17359566063dSJacob Faibussowitsch if (label) PetscCall(DMLabelMakeAllValid_Private(label)); 17369566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 173726c55118SMichael Lange /* Build a section of stratum values per point, generate the according SF 173826c55118SMichael Lange and distribute point-wise stratum values to leaves. */ 17399566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, &nleaves, NULL, NULL)); 17409566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(comm, &rootSection)); 17419566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(rootSection, 0, nroots)); 174226c55118SMichael Lange if (label) { 174326c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1744ad8374ffSToby Isaac const PetscInt *points; 1745ad8374ffSToby Isaac 17469566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[s], &points)); 174748a46eb9SPierre Jolivet for (l = 0; l < label->stratumSizes[s]; l++) PetscCall(PetscSectionAddDof(rootSection, points[l], 1)); 17489566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[s], &points)); 174926c55118SMichael Lange } 175026c55118SMichael Lange } 17519566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUp(rootSection)); 175226c55118SMichael Lange /* Create a point-wise array of stratum values */ 17539566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(rootSection, &size)); 17549566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &rootStrata)); 17559566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &rootIdx)); 175626c55118SMichael Lange if (label) { 175726c55118SMichael Lange for (s = 0; s < label->numStrata; ++s) { 1758ad8374ffSToby Isaac const PetscInt *points; 1759ad8374ffSToby Isaac 17609566063dSJacob Faibussowitsch PetscCall(ISGetIndices(label->points[s], &points)); 176126c55118SMichael Lange for (l = 0; l < label->stratumSizes[s]; l++) { 1762ad8374ffSToby Isaac const PetscInt p = points[l]; 17639566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(rootSection, p, &offset)); 176426c55118SMichael Lange rootStrata[offset + rootIdx[p]++] = label->stratumValues[s]; 176526c55118SMichael Lange } 17669566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(label->points[s], &points)); 176726c55118SMichael Lange } 176826c55118SMichael Lange } 176926c55118SMichael Lange /* Build SF that maps label points to remote processes */ 17709566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(comm, leafSection)); 17719566063dSJacob Faibussowitsch PetscCall(PetscSFDistributeSection(sf, rootSection, &remoteOffsets, *leafSection)); 17729566063dSJacob Faibussowitsch PetscCall(PetscSFCreateSectionSF(sf, rootSection, remoteOffsets, *leafSection, &labelSF)); 17739566063dSJacob Faibussowitsch PetscCall(PetscFree(remoteOffsets)); 177426c55118SMichael Lange /* Send the strata for each point over the derived SF */ 17759566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(*leafSection, &size)); 17769566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, leafStrata)); 17779566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(labelSF, MPIU_INT, rootStrata, *leafStrata, MPI_REPLACE)); 17789566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(labelSF, MPIU_INT, rootStrata, *leafStrata, MPI_REPLACE)); 177926c55118SMichael Lange /* Clean up */ 17809566063dSJacob Faibussowitsch PetscCall(PetscFree(rootStrata)); 17819566063dSJacob Faibussowitsch PetscCall(PetscFree(rootIdx)); 17829566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&rootSection)); 17839566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&labelSF)); 17843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 178526c55118SMichael Lange } 178626c55118SMichael Lange 178784f0b6dfSMatthew G. Knepley /*@ 178820f4b53cSBarry Smith DMLabelDistribute - Create a new label pushed forward over the `PetscSF` 178984f0b6dfSMatthew G. Knepley 179020f4b53cSBarry Smith Collective 17915b5e7992SMatthew G. Knepley 179284f0b6dfSMatthew G. Knepley Input Parameters: 179320f4b53cSBarry Smith + label - the `DMLabel` 179484f0b6dfSMatthew G. Knepley - sf - the map from old to new distribution 179584f0b6dfSMatthew G. Knepley 179684f0b6dfSMatthew G. Knepley Output Parameter: 179760225df5SJacob Faibussowitsch . labelNew - the new redistributed label 179884f0b6dfSMatthew G. Knepley 179984f0b6dfSMatthew G. Knepley Level: intermediate 180084f0b6dfSMatthew G. Knepley 180120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelCreate()`, `DMLabelGetValue()`, `DMLabelSetValue()`, `DMLabelClearValue()` 180284f0b6dfSMatthew G. Knepley @*/ 1803d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelDistribute(DMLabel label, PetscSF sf, DMLabel *labelNew) 1804d71ae5a4SJacob Faibussowitsch { 1805c58f1c22SToby Isaac MPI_Comm comm; 180626c55118SMichael Lange PetscSection leafSection; 180726c55118SMichael Lange PetscInt p, pStart, pEnd, s, size, dof, offset, stratum; 180826c55118SMichael Lange PetscInt *leafStrata, *strataIdx; 1809ad8374ffSToby Isaac PetscInt **points; 1810d67d17b1SMatthew G. Knepley const char *lname = NULL; 1811c58f1c22SToby Isaac char *name; 1812c58f1c22SToby Isaac PetscInt nameSize; 1813e8f14785SLisandro Dalcin PetscHSetI stratumHash; 1814c58f1c22SToby Isaac size_t len = 0; 181526c55118SMichael Lange PetscMPIInt rank; 1816c58f1c22SToby Isaac 1817c58f1c22SToby Isaac PetscFunctionBegin; 1818d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 1819f018e600SMatthew G. Knepley if (label) { 1820f018e600SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 18219f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 18229566063dSJacob Faibussowitsch PetscCall(DMLabelMakeAllValid_Private(label)); 1823f018e600SMatthew G. Knepley } 18249566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 18259566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 1826c58f1c22SToby Isaac /* Bcast name */ 1827dd400576SPatrick Sanan if (rank == 0) { 18289566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &lname)); 18299566063dSJacob Faibussowitsch PetscCall(PetscStrlen(lname, &len)); 1830d67d17b1SMatthew G. Knepley } 1831c58f1c22SToby Isaac nameSize = len; 18329566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm)); 18339566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nameSize + 1, &name)); 18349566063dSJacob Faibussowitsch if (rank == 0) PetscCall(PetscArraycpy(name, lname, nameSize + 1)); 18359566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(name, nameSize + 1, MPI_CHAR, 0, comm)); 18369566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PETSC_COMM_SELF, name, labelNew)); 18379566063dSJacob Faibussowitsch PetscCall(PetscFree(name)); 183877d236dfSMichael Lange /* Bcast defaultValue */ 1839dd400576SPatrick Sanan if (rank == 0) (*labelNew)->defaultValue = label->defaultValue; 18409566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&(*labelNew)->defaultValue, 1, MPIU_INT, 0, comm)); 184126c55118SMichael Lange /* Distribute stratum values over the SF and get the point mapping on the receiver */ 18429566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute_Internal(label, sf, &leafSection, &leafStrata)); 18435cbdf6fcSMichael Lange /* Determine received stratum values and initialise new label*/ 18449566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&stratumHash)); 18459566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(leafSection, &size)); 18469566063dSJacob Faibussowitsch for (p = 0; p < size; ++p) PetscCall(PetscHSetIAdd(stratumHash, leafStrata[p])); 18479566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetSize(stratumHash, &(*labelNew)->numStrata)); 18489566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->validIS)); 1849ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) (*labelNew)->validIS[s] = PETSC_TRUE; 18509566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*labelNew)->numStrata, &(*labelNew)->stratumValues)); 18515cbdf6fcSMichael Lange /* Turn leafStrata into indices rather than stratum values */ 18525cbdf6fcSMichael Lange offset = 0; 18539566063dSJacob Faibussowitsch PetscCall(PetscHSetIGetElems(stratumHash, &offset, (*labelNew)->stratumValues)); 18549566063dSJacob Faibussowitsch PetscCall(PetscSortInt((*labelNew)->numStrata, (*labelNew)->stratumValues)); 185548a46eb9SPierre Jolivet for (s = 0; s < (*labelNew)->numStrata; ++s) PetscCall(PetscHMapISet((*labelNew)->hmap, (*labelNew)->stratumValues[s], s)); 18565cbdf6fcSMichael Lange for (p = 0; p < size; ++p) { 1857231b9e6fSMatthew G. Knepley for (s = 0; s < (*labelNew)->numStrata; ++s) { 18589371c9d4SSatish Balay if (leafStrata[p] == (*labelNew)->stratumValues[s]) { 18599371c9d4SSatish Balay leafStrata[p] = s; 18609371c9d4SSatish Balay break; 18619371c9d4SSatish Balay } 18625cbdf6fcSMichael Lange } 18635cbdf6fcSMichael Lange } 1864c58f1c22SToby Isaac /* Rebuild the point strata on the receiver */ 18659566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->stratumSizes)); 18669566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(leafSection, &pStart, &pEnd)); 1867c58f1c22SToby Isaac for (p = pStart; p < pEnd; p++) { 18689566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(leafSection, p, &dof)); 18699566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(leafSection, p, &offset)); 1870ad540459SPierre Jolivet for (s = 0; s < dof; s++) (*labelNew)->stratumSizes[leafStrata[offset + s]]++; 1871c58f1c22SToby Isaac } 18729566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->ht)); 18739f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1((*labelNew)->numStrata, &(*labelNew)->points)); 18749f6c5813SMatthew G. Knepley PetscCall(PetscCalloc1((*labelNew)->numStrata, &points)); 1875c58f1c22SToby Isaac for (s = 0; s < (*labelNew)->numStrata; ++s) { 18769566063dSJacob Faibussowitsch PetscCall(PetscHSetICreate(&(*labelNew)->ht[s])); 1877f4f49eeaSPierre Jolivet PetscCall(PetscMalloc1((*labelNew)->stratumSizes[s], &points[s])); 1878c58f1c22SToby Isaac } 1879c58f1c22SToby Isaac /* Insert points into new strata */ 18809566063dSJacob Faibussowitsch PetscCall(PetscCalloc1((*labelNew)->numStrata, &strataIdx)); 18819566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(leafSection, &pStart, &pEnd)); 1882c58f1c22SToby Isaac for (p = pStart; p < pEnd; p++) { 18839566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(leafSection, p, &dof)); 18849566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(leafSection, p, &offset)); 1885c58f1c22SToby Isaac for (s = 0; s < dof; s++) { 1886c58f1c22SToby Isaac stratum = leafStrata[offset + s]; 1887ad8374ffSToby Isaac points[stratum][strataIdx[stratum]++] = p; 1888c58f1c22SToby Isaac } 1889c58f1c22SToby Isaac } 1890ad8374ffSToby Isaac for (s = 0; s < (*labelNew)->numStrata; s++) { 1891f4f49eeaSPierre Jolivet PetscCall(ISCreateGeneral(PETSC_COMM_SELF, (*labelNew)->stratumSizes[s], &points[s][0], PETSC_OWN_POINTER, &((*labelNew)->points[s]))); 18929566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((*labelNew)->points[s]), "indices")); 1893ad8374ffSToby Isaac } 18949566063dSJacob Faibussowitsch PetscCall(PetscFree(points)); 18959566063dSJacob Faibussowitsch PetscCall(PetscHSetIDestroy(&stratumHash)); 18969566063dSJacob Faibussowitsch PetscCall(PetscFree(leafStrata)); 18979566063dSJacob Faibussowitsch PetscCall(PetscFree(strataIdx)); 18989566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&leafSection)); 18993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1900c58f1c22SToby Isaac } 1901c58f1c22SToby Isaac 19027937d9ceSMichael Lange /*@ 19037937d9ceSMichael Lange DMLabelGather - Gather all label values from leafs into roots 19047937d9ceSMichael Lange 190520f4b53cSBarry Smith Collective 19065b5e7992SMatthew G. Knepley 19077937d9ceSMichael Lange Input Parameters: 190820f4b53cSBarry Smith + label - the `DMLabel` 190920f4b53cSBarry Smith - sf - the `PetscSF` communication map 19107937d9ceSMichael Lange 19112fe279fdSBarry Smith Output Parameter: 191220f4b53cSBarry Smith . labelNew - the new `DMLabel` with localised leaf values 19137937d9ceSMichael Lange 19147937d9ceSMichael Lange Level: developer 19157937d9ceSMichael Lange 191620f4b53cSBarry Smith Note: 191720f4b53cSBarry Smith This is the inverse operation to `DMLabelDistribute()`. 19187937d9ceSMichael Lange 191920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDistribute()` 19207937d9ceSMichael Lange @*/ 1921d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelGather(DMLabel label, PetscSF sf, DMLabel *labelNew) 1922d71ae5a4SJacob Faibussowitsch { 19237937d9ceSMichael Lange MPI_Comm comm; 19247937d9ceSMichael Lange PetscSection rootSection; 19257937d9ceSMichael Lange PetscSF sfLabel; 19267937d9ceSMichael Lange PetscSFNode *rootPoints, *leafPoints; 19277937d9ceSMichael Lange PetscInt p, s, d, nroots, nleaves, nmultiroots, idx, dof, offset; 19287937d9ceSMichael Lange const PetscInt *rootDegree, *ilocal; 19297937d9ceSMichael Lange PetscInt *rootStrata; 1930d67d17b1SMatthew G. Knepley const char *lname; 19317937d9ceSMichael Lange char *name; 19327937d9ceSMichael Lange PetscInt nameSize; 19337937d9ceSMichael Lange size_t len = 0; 19349852e123SBarry Smith PetscMPIInt rank, size; 19357937d9ceSMichael Lange 19367937d9ceSMichael Lange PetscFunctionBegin; 1937d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 1938d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 19399f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 19409566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 19419566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 19429566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 19437937d9ceSMichael Lange /* Bcast name */ 1944dd400576SPatrick Sanan if (rank == 0) { 19459566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)label, &lname)); 19469566063dSJacob Faibussowitsch PetscCall(PetscStrlen(lname, &len)); 1947d67d17b1SMatthew G. Knepley } 19487937d9ceSMichael Lange nameSize = len; 19499566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&nameSize, 1, MPIU_INT, 0, comm)); 19509566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nameSize + 1, &name)); 19519566063dSJacob Faibussowitsch if (rank == 0) PetscCall(PetscArraycpy(name, lname, nameSize + 1)); 19529566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(name, nameSize + 1, MPI_CHAR, 0, comm)); 19539566063dSJacob Faibussowitsch PetscCall(DMLabelCreate(PETSC_COMM_SELF, name, labelNew)); 19549566063dSJacob Faibussowitsch PetscCall(PetscFree(name)); 19557937d9ceSMichael Lange /* Gather rank/index pairs of leaves into local roots to build 19567937d9ceSMichael Lange an inverse, multi-rooted SF. Note that this ignores local leaf 19577937d9ceSMichael Lange indexing due to the use of the multiSF in PetscSFGather. */ 19589566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, &nleaves, &ilocal, NULL)); 19599566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nroots, &leafPoints)); 1960dc53bc9bSMatthew G. Knepley for (p = 0; p < nroots; ++p) leafPoints[p].rank = leafPoints[p].index = -1; 19617937d9ceSMichael Lange for (p = 0; p < nleaves; p++) { 19628212dd46SStefano Zampini PetscInt ilp = ilocal ? ilocal[p] : p; 19638212dd46SStefano Zampini 19648212dd46SStefano Zampini leafPoints[ilp].index = ilp; 19658212dd46SStefano Zampini leafPoints[ilp].rank = rank; 19667937d9ceSMichael Lange } 19679566063dSJacob Faibussowitsch PetscCall(PetscSFComputeDegreeBegin(sf, &rootDegree)); 19689566063dSJacob Faibussowitsch PetscCall(PetscSFComputeDegreeEnd(sf, &rootDegree)); 19697937d9ceSMichael Lange for (p = 0, nmultiroots = 0; p < nroots; ++p) nmultiroots += rootDegree[p]; 19709566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nmultiroots, &rootPoints)); 19719566063dSJacob Faibussowitsch PetscCall(PetscSFGatherBegin(sf, MPIU_2INT, leafPoints, rootPoints)); 19729566063dSJacob Faibussowitsch PetscCall(PetscSFGatherEnd(sf, MPIU_2INT, leafPoints, rootPoints)); 19739566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(comm, &sfLabel)); 19749566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraph(sfLabel, nroots, nmultiroots, NULL, PETSC_OWN_POINTER, rootPoints, PETSC_OWN_POINTER)); 19757937d9ceSMichael Lange /* Migrate label over inverted SF to pull stratum values at leaves into roots. */ 19769566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute_Internal(label, sfLabel, &rootSection, &rootStrata)); 19777937d9ceSMichael Lange /* Rebuild the point strata on the receiver */ 19787937d9ceSMichael Lange for (p = 0, idx = 0; p < nroots; p++) { 19797937d9ceSMichael Lange for (d = 0; d < rootDegree[p]; d++) { 19809566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(rootSection, idx + d, &dof)); 19819566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(rootSection, idx + d, &offset)); 19829566063dSJacob Faibussowitsch for (s = 0; s < dof; s++) PetscCall(DMLabelSetValue(*labelNew, p, rootStrata[offset + s])); 19837937d9ceSMichael Lange } 19847937d9ceSMichael Lange idx += rootDegree[p]; 19857937d9ceSMichael Lange } 19869566063dSJacob Faibussowitsch PetscCall(PetscFree(leafPoints)); 19879566063dSJacob Faibussowitsch PetscCall(PetscFree(rootStrata)); 19889566063dSJacob Faibussowitsch PetscCall(PetscSectionDestroy(&rootSection)); 19899566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&sfLabel)); 19903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19917937d9ceSMichael Lange } 19927937d9ceSMichael Lange 1993d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelPropagateInit_Internal(DMLabel label, PetscSF pointSF, PetscInt valArray[]) 1994d71ae5a4SJacob Faibussowitsch { 1995d42890abSMatthew G. Knepley const PetscInt *degree; 1996d42890abSMatthew G. Knepley const PetscInt *points; 1997d42890abSMatthew G. Knepley PetscInt Nr, r, Nl, l, val, defVal; 1998d42890abSMatthew G. Knepley 1999d42890abSMatthew G. Knepley PetscFunctionBegin; 2000d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2001d42890abSMatthew G. Knepley /* Add in leaves */ 2002d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, &Nl, &points, NULL)); 2003d42890abSMatthew G. Knepley for (l = 0; l < Nl; ++l) { 2004d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, points[l], &val)); 2005d42890abSMatthew G. Knepley if (val != defVal) valArray[points[l]] = val; 2006d42890abSMatthew G. Knepley } 2007d42890abSMatthew G. Knepley /* Add in shared roots */ 2008d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeBegin(pointSF, °ree)); 2009d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeEnd(pointSF, °ree)); 2010d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) { 2011d42890abSMatthew G. Knepley if (degree[r]) { 2012d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, r, &val)); 2013d42890abSMatthew G. Knepley if (val != defVal) valArray[r] = val; 2014d42890abSMatthew G. Knepley } 2015d42890abSMatthew G. Knepley } 20163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2017d42890abSMatthew G. Knepley } 2018d42890abSMatthew G. Knepley 2019d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMLabelPropagateFini_Internal(DMLabel label, PetscSF pointSF, PetscInt valArray[], PetscErrorCode (*markPoint)(DMLabel, PetscInt, PetscInt, void *), void *ctx) 2020d71ae5a4SJacob Faibussowitsch { 2021d42890abSMatthew G. Knepley const PetscInt *degree; 2022d42890abSMatthew G. Knepley const PetscInt *points; 2023d42890abSMatthew G. Knepley PetscInt Nr, r, Nl, l, val, defVal; 2024d42890abSMatthew G. Knepley 2025d42890abSMatthew G. Knepley PetscFunctionBegin; 2026d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2027d42890abSMatthew G. Knepley /* Read out leaves */ 2028d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, &Nl, &points, NULL)); 2029d42890abSMatthew G. Knepley for (l = 0; l < Nl; ++l) { 2030d42890abSMatthew G. Knepley const PetscInt p = points[l]; 2031d42890abSMatthew G. Knepley const PetscInt cval = valArray[p]; 2032d42890abSMatthew G. Knepley 2033d42890abSMatthew G. Knepley if (cval != defVal) { 2034d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, p, &val)); 2035d42890abSMatthew G. Knepley if (val == defVal) { 2036d42890abSMatthew G. Knepley PetscCall(DMLabelSetValue(label, p, cval)); 203748a46eb9SPierre Jolivet if (markPoint) PetscCall((*markPoint)(label, p, cval, ctx)); 2038d42890abSMatthew G. Knepley } 2039d42890abSMatthew G. Knepley } 2040d42890abSMatthew G. Knepley } 2041d42890abSMatthew G. Knepley /* Read out shared roots */ 2042d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeBegin(pointSF, °ree)); 2043d42890abSMatthew G. Knepley PetscCall(PetscSFComputeDegreeEnd(pointSF, °ree)); 2044d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) { 2045d42890abSMatthew G. Knepley if (degree[r]) { 2046d42890abSMatthew G. Knepley const PetscInt cval = valArray[r]; 2047d42890abSMatthew G. Knepley 2048d42890abSMatthew G. Knepley if (cval != defVal) { 2049d42890abSMatthew G. Knepley PetscCall(DMLabelGetValue(label, r, &val)); 2050d42890abSMatthew G. Knepley if (val == defVal) { 2051d42890abSMatthew G. Knepley PetscCall(DMLabelSetValue(label, r, cval)); 205248a46eb9SPierre Jolivet if (markPoint) PetscCall((*markPoint)(label, r, cval, ctx)); 2053d42890abSMatthew G. Knepley } 2054d42890abSMatthew G. Knepley } 2055d42890abSMatthew G. Knepley } 2056d42890abSMatthew G. Knepley } 20573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2058d42890abSMatthew G. Knepley } 2059d42890abSMatthew G. Knepley 2060d42890abSMatthew G. Knepley /*@ 2061d42890abSMatthew G. Knepley DMLabelPropagateBegin - Setup a cycle of label propagation 2062d42890abSMatthew G. Knepley 206320f4b53cSBarry Smith Collective 2064d42890abSMatthew G. Knepley 2065d42890abSMatthew G. Knepley Input Parameters: 206620f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 206720f4b53cSBarry Smith - sf - The `PetscSF` describing parallel layout of the label points 2068d42890abSMatthew G. Knepley 2069d42890abSMatthew G. Knepley Level: intermediate 2070d42890abSMatthew G. Knepley 207120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateEnd()`, `DMLabelPropagatePush()` 2072d42890abSMatthew G. Knepley @*/ 2073d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPropagateBegin(DMLabel label, PetscSF sf) 2074d71ae5a4SJacob Faibussowitsch { 2075d42890abSMatthew G. Knepley PetscInt Nr, r, defVal; 2076d42890abSMatthew G. Knepley PetscMPIInt size; 2077d42890abSMatthew G. Knepley 2078d42890abSMatthew G. Knepley PetscFunctionBegin; 20799f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2080d42890abSMatthew G. Knepley PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)sf), &size)); 2081d42890abSMatthew G. Knepley if (size > 1) { 2082d42890abSMatthew G. Knepley PetscCall(DMLabelGetDefaultValue(label, &defVal)); 2083d42890abSMatthew G. Knepley PetscCall(PetscSFGetGraph(sf, &Nr, NULL, NULL, NULL)); 2084d42890abSMatthew G. Knepley if (Nr >= 0) PetscCall(PetscMalloc1(Nr, &label->propArray)); 2085d42890abSMatthew G. Knepley for (r = 0; r < Nr; ++r) label->propArray[r] = defVal; 2086d42890abSMatthew G. Knepley } 20873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2088d42890abSMatthew G. Knepley } 2089d42890abSMatthew G. Knepley 2090d42890abSMatthew G. Knepley /*@ 2091d42890abSMatthew G. Knepley DMLabelPropagateEnd - Tear down a cycle of label propagation 2092d42890abSMatthew G. Knepley 209320f4b53cSBarry Smith Collective 2094d42890abSMatthew G. Knepley 2095d42890abSMatthew G. Knepley Input Parameters: 209620f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 209760225df5SJacob Faibussowitsch - pointSF - The `PetscSF` describing parallel layout of the label points 2098d42890abSMatthew G. Knepley 2099d42890abSMatthew G. Knepley Level: intermediate 2100d42890abSMatthew G. Knepley 210120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateBegin()`, `DMLabelPropagatePush()` 2102d42890abSMatthew G. Knepley @*/ 2103d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelPropagateEnd(DMLabel label, PetscSF pointSF) 2104d71ae5a4SJacob Faibussowitsch { 2105d42890abSMatthew G. Knepley PetscFunctionBegin; 21069f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2107d42890abSMatthew G. Knepley PetscCall(PetscFree(label->propArray)); 2108d42890abSMatthew G. Knepley label->propArray = NULL; 21093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2110d42890abSMatthew G. Knepley } 2111d42890abSMatthew G. Knepley 2112d42890abSMatthew G. Knepley /*@C 2113d42890abSMatthew G. Knepley DMLabelPropagatePush - Tear down a cycle of label propagation 2114d42890abSMatthew G. Knepley 211520f4b53cSBarry Smith Collective 2116d42890abSMatthew G. Knepley 2117d42890abSMatthew G. Knepley Input Parameters: 211820f4b53cSBarry Smith + label - The `DMLabel` to propagate across processes 2119a4e35b19SJacob Faibussowitsch . pointSF - The `PetscSF` describing parallel layout of the label points 212020f4b53cSBarry Smith . markPoint - An optional callback that is called when a point is marked, or `NULL` 212120f4b53cSBarry Smith - ctx - An optional user context for the callback, or `NULL` 2122d42890abSMatthew G. Knepley 212320f4b53cSBarry Smith Calling sequence of `markPoint`: 212420f4b53cSBarry Smith + label - The `DMLabel` 2125d42890abSMatthew G. Knepley . p - The point being marked 2126a4e35b19SJacob Faibussowitsch . val - The label value for `p` 2127d42890abSMatthew G. Knepley - ctx - An optional user context 2128d42890abSMatthew G. Knepley 2129d42890abSMatthew G. Knepley Level: intermediate 2130d42890abSMatthew G. Knepley 213120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelPropagateBegin()`, `DMLabelPropagateEnd()` 2132d42890abSMatthew G. Knepley @*/ 2133a4e35b19SJacob Faibussowitsch PetscErrorCode DMLabelPropagatePush(DMLabel label, PetscSF pointSF, PetscErrorCode (*markPoint)(DMLabel label, PetscInt p, PetscInt val, void *ctx), void *ctx) 2134d71ae5a4SJacob Faibussowitsch { 2135c50b2d26SMatthew G. Knepley PetscInt *valArray = label->propArray, Nr; 2136d42890abSMatthew G. Knepley PetscMPIInt size; 2137d42890abSMatthew G. Knepley 2138d42890abSMatthew G. Knepley PetscFunctionBegin; 21399f6c5813SMatthew G. Knepley PetscCheck(!label->readonly, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_WRONG, "Read-only labels cannot be altered"); 2140d42890abSMatthew G. Knepley PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)pointSF), &size)); 2141c50b2d26SMatthew G. Knepley PetscCall(PetscSFGetGraph(pointSF, &Nr, NULL, NULL, NULL)); 2142c50b2d26SMatthew G. Knepley if (size > 1 && Nr >= 0) { 2143d42890abSMatthew G. Knepley /* Communicate marked edges 2144d42890abSMatthew G. Knepley The current implementation allocates an array the size of the number of root. We put the label values into the 2145d42890abSMatthew G. Knepley array, and then call PetscSFReduce()+PetscSFBcast() to make the marks consistent. 2146d42890abSMatthew G. Knepley 2147d42890abSMatthew G. Knepley TODO: We could use in-place communication with a different SF 2148d42890abSMatthew G. Knepley We use MPI_SUM for the Reduce, and check the result against the rootdegree. If sum >= rootdegree+1, then the edge has 2149d42890abSMatthew G. Knepley already been marked. If not, it might have been handled on the process in this round, but we add it anyway. 2150d42890abSMatthew G. Knepley 2151d42890abSMatthew G. Knepley In order to update the queue with the new edges from the label communication, we use BcastAnOp(MPI_SUM), so that new 2152d42890abSMatthew G. Knepley values will have 1+0=1 and old values will have 1+1=2. Loop over these, resetting the values to 1, and adding any new 2153d42890abSMatthew G. Knepley edge to the queue. 2154d42890abSMatthew G. Knepley */ 2155d42890abSMatthew G. Knepley PetscCall(DMLabelPropagateInit_Internal(label, pointSF, valArray)); 2156d42890abSMatthew G. Knepley PetscCall(PetscSFReduceBegin(pointSF, MPIU_INT, valArray, valArray, MPI_MAX)); 2157d42890abSMatthew G. Knepley PetscCall(PetscSFReduceEnd(pointSF, MPIU_INT, valArray, valArray, MPI_MAX)); 2158d42890abSMatthew G. Knepley PetscCall(PetscSFBcastBegin(pointSF, MPIU_INT, valArray, valArray, MPI_REPLACE)); 2159d42890abSMatthew G. Knepley PetscCall(PetscSFBcastEnd(pointSF, MPIU_INT, valArray, valArray, MPI_REPLACE)); 2160d42890abSMatthew G. Knepley PetscCall(DMLabelPropagateFini_Internal(label, pointSF, valArray, markPoint, ctx)); 2161d42890abSMatthew G. Knepley } 21623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2163d42890abSMatthew G. Knepley } 2164d42890abSMatthew G. Knepley 216584f0b6dfSMatthew G. Knepley /*@ 216620f4b53cSBarry Smith DMLabelConvertToSection - Make a `PetscSection`/`IS` pair that encodes the label 216784f0b6dfSMatthew G. Knepley 216820f4b53cSBarry Smith Not Collective 21695b5e7992SMatthew G. Knepley 217084f0b6dfSMatthew G. Knepley Input Parameter: 217120f4b53cSBarry Smith . label - the `DMLabel` 217284f0b6dfSMatthew G. Knepley 217384f0b6dfSMatthew G. Knepley Output Parameters: 217484f0b6dfSMatthew G. Knepley + section - the section giving offsets for each stratum 217520f4b53cSBarry Smith - is - An `IS` containing all the label points 217684f0b6dfSMatthew G. Knepley 217784f0b6dfSMatthew G. Knepley Level: developer 217884f0b6dfSMatthew G. Knepley 217920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelDistribute()` 218084f0b6dfSMatthew G. Knepley @*/ 2181d71ae5a4SJacob Faibussowitsch PetscErrorCode DMLabelConvertToSection(DMLabel label, PetscSection *section, IS *is) 2182d71ae5a4SJacob Faibussowitsch { 2183c58f1c22SToby Isaac IS vIS; 2184c58f1c22SToby Isaac const PetscInt *values; 2185c58f1c22SToby Isaac PetscInt *points; 2186c58f1c22SToby Isaac PetscInt nV, vS = 0, vE = 0, v, N; 2187c58f1c22SToby Isaac 2188c58f1c22SToby Isaac PetscFunctionBegin; 2189d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 21909566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(label, &nV)); 21919566063dSJacob Faibussowitsch PetscCall(DMLabelGetValueIS(label, &vIS)); 21929566063dSJacob Faibussowitsch PetscCall(ISGetIndices(vIS, &values)); 21939371c9d4SSatish Balay if (nV) { 21949371c9d4SSatish Balay vS = values[0]; 21959371c9d4SSatish Balay vE = values[0] + 1; 21969371c9d4SSatish Balay } 2197c58f1c22SToby Isaac for (v = 1; v < nV; ++v) { 2198c58f1c22SToby Isaac vS = PetscMin(vS, values[v]); 2199c58f1c22SToby Isaac vE = PetscMax(vE, values[v] + 1); 2200c58f1c22SToby Isaac } 22019566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(PETSC_COMM_SELF, section)); 22029566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(*section, vS, vE)); 2203c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 2204c58f1c22SToby Isaac PetscInt n; 2205c58f1c22SToby Isaac 22069566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumSize(label, values[v], &n)); 22079566063dSJacob Faibussowitsch PetscCall(PetscSectionSetDof(*section, values[v], n)); 2208c58f1c22SToby Isaac } 22099566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUp(*section)); 22109566063dSJacob Faibussowitsch PetscCall(PetscSectionGetStorageSize(*section, &N)); 22119566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(N, &points)); 2212c58f1c22SToby Isaac for (v = 0; v < nV; ++v) { 2213c58f1c22SToby Isaac IS is; 2214c58f1c22SToby Isaac const PetscInt *spoints; 2215c58f1c22SToby Isaac PetscInt dof, off, p; 2216c58f1c22SToby Isaac 22179566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(*section, values[v], &dof)); 22189566063dSJacob Faibussowitsch PetscCall(PetscSectionGetOffset(*section, values[v], &off)); 22199566063dSJacob Faibussowitsch PetscCall(DMLabelGetStratumIS(label, values[v], &is)); 22209566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &spoints)); 2221c58f1c22SToby Isaac for (p = 0; p < dof; ++p) points[off + p] = spoints[p]; 22229566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &spoints)); 22239566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is)); 2224c58f1c22SToby Isaac } 22259566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(vIS, &values)); 22269566063dSJacob Faibussowitsch PetscCall(ISDestroy(&vIS)); 22279566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, N, points, PETSC_OWN_POINTER, is)); 22283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2229c58f1c22SToby Isaac } 2230c58f1c22SToby Isaac 22319f6c5813SMatthew G. Knepley /*@C 22329f6c5813SMatthew G. Knepley DMLabelRegister - Adds a new label component implementation 22339f6c5813SMatthew G. Knepley 22349f6c5813SMatthew G. Knepley Not Collective 22359f6c5813SMatthew G. Knepley 22369f6c5813SMatthew G. Knepley Input Parameters: 22379f6c5813SMatthew G. Knepley + name - The name of a new user-defined creation routine 22389f6c5813SMatthew G. Knepley - create_func - The creation routine itself 22399f6c5813SMatthew G. Knepley 22409f6c5813SMatthew G. Knepley Notes: 22419f6c5813SMatthew G. Knepley `DMLabelRegister()` may be called multiple times to add several user-defined labels 22429f6c5813SMatthew G. Knepley 224360225df5SJacob Faibussowitsch Example Usage: 22449f6c5813SMatthew G. Knepley .vb 22459f6c5813SMatthew G. Knepley DMLabelRegister("my_label", MyLabelCreate); 22469f6c5813SMatthew G. Knepley .ve 22479f6c5813SMatthew G. Knepley 22489f6c5813SMatthew G. Knepley Then, your label type can be chosen with the procedural interface via 22499f6c5813SMatthew G. Knepley .vb 22509f6c5813SMatthew G. Knepley DMLabelCreate(MPI_Comm, DMLabel *); 22519f6c5813SMatthew G. Knepley DMLabelSetType(DMLabel, "my_label"); 22529f6c5813SMatthew G. Knepley .ve 22539f6c5813SMatthew G. Knepley or at runtime via the option 22549f6c5813SMatthew G. Knepley .vb 22559f6c5813SMatthew G. Knepley -dm_label_type my_label 22569f6c5813SMatthew G. Knepley .ve 22579f6c5813SMatthew G. Knepley 22589f6c5813SMatthew G. Knepley Level: advanced 22599f6c5813SMatthew G. Knepley 226060225df5SJacob Faibussowitsch .seealso: `DMLabel`, `DM`, `DMLabelType`, `DMLabelRegisterAll()`, `DMLabelRegisterDestroy()` 22619f6c5813SMatthew G. Knepley @*/ 22629f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegister(const char name[], PetscErrorCode (*create_func)(DMLabel)) 22639f6c5813SMatthew G. Knepley { 22649f6c5813SMatthew G. Knepley PetscFunctionBegin; 22659f6c5813SMatthew G. Knepley PetscCall(DMInitializePackage()); 22669f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListAdd(&DMLabelList, name, create_func)); 22673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 22689f6c5813SMatthew G. Knepley } 22699f6c5813SMatthew G. Knepley 22709f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Concrete(DMLabel); 22719f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Ephemeral(DMLabel); 22729f6c5813SMatthew G. Knepley 22739f6c5813SMatthew G. Knepley /*@C 22749f6c5813SMatthew G. Knepley DMLabelRegisterAll - Registers all of the `DMLabel` implementations in the `DM` package. 22759f6c5813SMatthew G. Knepley 22769f6c5813SMatthew G. Knepley Not Collective 22779f6c5813SMatthew G. Knepley 22789f6c5813SMatthew G. Knepley Level: advanced 22799f6c5813SMatthew G. Knepley 228020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMRegisterAll()`, `DMLabelRegisterDestroy()` 22819f6c5813SMatthew G. Knepley @*/ 22829f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegisterAll(void) 22839f6c5813SMatthew G. Knepley { 22849f6c5813SMatthew G. Knepley PetscFunctionBegin; 22853ba16761SJacob Faibussowitsch if (DMLabelRegisterAllCalled) PetscFunctionReturn(PETSC_SUCCESS); 22869f6c5813SMatthew G. Knepley DMLabelRegisterAllCalled = PETSC_TRUE; 22879f6c5813SMatthew G. Knepley 22889f6c5813SMatthew G. Knepley PetscCall(DMLabelRegister(DMLABELCONCRETE, DMLabelCreate_Concrete)); 22899f6c5813SMatthew G. Knepley PetscCall(DMLabelRegister(DMLABELEPHEMERAL, DMLabelCreate_Ephemeral)); 22903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 22919f6c5813SMatthew G. Knepley } 22929f6c5813SMatthew G. Knepley 22939f6c5813SMatthew G. Knepley /*@C 22949f6c5813SMatthew G. Knepley DMLabelRegisterDestroy - This function destroys the `DMLabel` registry. It is called from `PetscFinalize()`. 22959f6c5813SMatthew G. Knepley 22969f6c5813SMatthew G. Knepley Level: developer 22979f6c5813SMatthew G. Knepley 229820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscInitialize()` 22999f6c5813SMatthew G. Knepley @*/ 23009f6c5813SMatthew G. Knepley PetscErrorCode DMLabelRegisterDestroy(void) 23019f6c5813SMatthew G. Knepley { 23029f6c5813SMatthew G. Knepley PetscFunctionBegin; 23039f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListDestroy(&DMLabelList)); 23049f6c5813SMatthew G. Knepley DMLabelRegisterAllCalled = PETSC_FALSE; 23053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23069f6c5813SMatthew G. Knepley } 23079f6c5813SMatthew G. Knepley 2308cc4c1da9SBarry Smith /*@ 23099f6c5813SMatthew G. Knepley DMLabelSetType - Sets the particular implementation for a label. 23109f6c5813SMatthew G. Knepley 231120f4b53cSBarry Smith Collective 23129f6c5813SMatthew G. Knepley 23139f6c5813SMatthew G. Knepley Input Parameters: 23149f6c5813SMatthew G. Knepley + label - The label 23159f6c5813SMatthew G. Knepley - method - The name of the label type 23169f6c5813SMatthew G. Knepley 23179f6c5813SMatthew G. Knepley Options Database Key: 231820f4b53cSBarry Smith . -dm_label_type <type> - Sets the label type; use -help for a list of available types or see `DMLabelType` 23199f6c5813SMatthew G. Knepley 23209f6c5813SMatthew G. Knepley Level: intermediate 23219f6c5813SMatthew G. Knepley 232220f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelGetType()`, `DMLabelCreate()` 23239f6c5813SMatthew G. Knepley @*/ 23249f6c5813SMatthew G. Knepley PetscErrorCode DMLabelSetType(DMLabel label, DMLabelType method) 23259f6c5813SMatthew G. Knepley { 23269f6c5813SMatthew G. Knepley PetscErrorCode (*r)(DMLabel); 23279f6c5813SMatthew G. Knepley PetscBool match; 23289f6c5813SMatthew G. Knepley 23299f6c5813SMatthew G. Knepley PetscFunctionBegin; 23309f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 23319f6c5813SMatthew G. Knepley PetscCall(PetscObjectTypeCompare((PetscObject)label, method, &match)); 23323ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS); 23339f6c5813SMatthew G. Knepley 23349f6c5813SMatthew G. Knepley PetscCall(DMLabelRegisterAll()); 23359f6c5813SMatthew G. Knepley PetscCall(PetscFunctionListFind(DMLabelList, method, &r)); 23369f6c5813SMatthew G. Knepley PetscCheck(r, PetscObjectComm((PetscObject)label), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown DMLabel type: %s", method); 23379f6c5813SMatthew G. Knepley 23389f6c5813SMatthew G. Knepley PetscTryTypeMethod(label, destroy); 23399f6c5813SMatthew G. Knepley PetscCall(PetscMemzero(label->ops, sizeof(*label->ops))); 23409f6c5813SMatthew G. Knepley PetscCall(PetscObjectChangeTypeName((PetscObject)label, method)); 23419f6c5813SMatthew G. Knepley PetscCall((*r)(label)); 23423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23439f6c5813SMatthew G. Knepley } 23449f6c5813SMatthew G. Knepley 2345cc4c1da9SBarry Smith /*@ 23469f6c5813SMatthew G. Knepley DMLabelGetType - Gets the type name (as a string) from the label. 23479f6c5813SMatthew G. Knepley 23489f6c5813SMatthew G. Knepley Not Collective 23499f6c5813SMatthew G. Knepley 23509f6c5813SMatthew G. Knepley Input Parameter: 235120f4b53cSBarry Smith . label - The `DMLabel` 23529f6c5813SMatthew G. Knepley 23539f6c5813SMatthew G. Knepley Output Parameter: 235420f4b53cSBarry Smith . type - The `DMLabel` type name 23559f6c5813SMatthew G. Knepley 23569f6c5813SMatthew G. Knepley Level: intermediate 23579f6c5813SMatthew G. Knepley 235820f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `DMLabelSetType()`, `DMLabelCreate()` 23599f6c5813SMatthew G. Knepley @*/ 23609f6c5813SMatthew G. Knepley PetscErrorCode DMLabelGetType(DMLabel label, DMLabelType *type) 23619f6c5813SMatthew G. Knepley { 23629f6c5813SMatthew G. Knepley PetscFunctionBegin; 23639f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 23644f572ea9SToby Isaac PetscAssertPointer(type, 2); 23659f6c5813SMatthew G. Knepley PetscCall(DMLabelRegisterAll()); 23669f6c5813SMatthew G. Knepley *type = ((PetscObject)label)->type_name; 23673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23689f6c5813SMatthew G. Knepley } 23699f6c5813SMatthew G. Knepley 23709f6c5813SMatthew G. Knepley static PetscErrorCode DMLabelInitialize_Concrete(DMLabel label) 23719f6c5813SMatthew G. Knepley { 23729f6c5813SMatthew G. Knepley PetscFunctionBegin; 23739f6c5813SMatthew G. Knepley label->ops->view = DMLabelView_Concrete; 23749f6c5813SMatthew G. Knepley label->ops->setup = NULL; 23759f6c5813SMatthew G. Knepley label->ops->duplicate = DMLabelDuplicate_Concrete; 23769f6c5813SMatthew G. Knepley label->ops->getstratumis = DMLabelGetStratumIS_Concrete; 23773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23789f6c5813SMatthew G. Knepley } 23799f6c5813SMatthew G. Knepley 23809f6c5813SMatthew G. Knepley PETSC_EXTERN PetscErrorCode DMLabelCreate_Concrete(DMLabel label) 23819f6c5813SMatthew G. Knepley { 23829f6c5813SMatthew G. Knepley PetscFunctionBegin; 23839f6c5813SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 1); 23849f6c5813SMatthew G. Knepley PetscCall(DMLabelInitialize_Concrete(label)); 23853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 23869f6c5813SMatthew G. Knepley } 23879f6c5813SMatthew G. Knepley 238884f0b6dfSMatthew G. Knepley /*@ 2389c58f1c22SToby Isaac PetscSectionCreateGlobalSectionLabel - Create a section describing the global field layout using 239020f4b53cSBarry Smith the local section and an `PetscSF` describing the section point overlap. 2391c58f1c22SToby Isaac 239220f4b53cSBarry Smith Collective 23935b5e7992SMatthew G. Knepley 2394c58f1c22SToby Isaac Input Parameters: 239520f4b53cSBarry Smith + s - The `PetscSection` for the local field layout 239620f4b53cSBarry Smith . sf - The `PetscSF` describing parallel layout of the section points 239720f4b53cSBarry Smith . includeConstraints - By default this is `PETSC_FALSE`, meaning that the global field vector will not possess constrained dofs 2398c58f1c22SToby Isaac . label - The label specifying the points 2399c58f1c22SToby Isaac - labelValue - The label stratum specifying the points 2400c58f1c22SToby Isaac 2401c58f1c22SToby Isaac Output Parameter: 240220f4b53cSBarry Smith . gsection - The `PetscSection` for the global field layout 2403c58f1c22SToby Isaac 2404c58f1c22SToby Isaac Level: developer 2405c58f1c22SToby Isaac 240620f4b53cSBarry Smith Note: 240720f4b53cSBarry Smith This gives negative sizes and offsets to points not owned by this process 240820f4b53cSBarry Smith 240920f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionCreate()` 2410c58f1c22SToby Isaac @*/ 2411d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionCreateGlobalSectionLabel(PetscSection s, PetscSF sf, PetscBool includeConstraints, DMLabel label, PetscInt labelValue, PetscSection *gsection) 2412d71ae5a4SJacob Faibussowitsch { 2413c58f1c22SToby Isaac PetscInt *neg = NULL, *tmpOff = NULL; 2414c58f1c22SToby Isaac PetscInt pStart, pEnd, p, dof, cdof, off, globalOff = 0, nroots; 2415c58f1c22SToby Isaac 2416c58f1c22SToby Isaac PetscFunctionBegin; 2417d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(s, PETSC_SECTION_CLASSID, 1); 2418d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 2); 2419d67d17b1SMatthew G. Knepley PetscValidHeaderSpecific(label, DMLABEL_CLASSID, 4); 24209566063dSJacob Faibussowitsch PetscCall(PetscSectionCreate(PetscObjectComm((PetscObject)s), gsection)); 24219566063dSJacob Faibussowitsch PetscCall(PetscSectionGetChart(s, &pStart, &pEnd)); 24229566063dSJacob Faibussowitsch PetscCall(PetscSectionSetChart(*gsection, pStart, pEnd)); 24239566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(sf, &nroots, NULL, NULL, NULL)); 2424c58f1c22SToby Isaac if (nroots >= 0) { 242563a3b9bcSJacob Faibussowitsch PetscCheck(nroots >= pEnd - pStart, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "PetscSF nroots %" PetscInt_FMT " < %" PetscInt_FMT " section size", nroots, pEnd - pStart); 24269566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &neg)); 2427c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 24289566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nroots, &tmpOff)); 2429c58f1c22SToby Isaac } else { 2430c58f1c22SToby Isaac tmpOff = &(*gsection)->atlasDof[-pStart]; 2431c58f1c22SToby Isaac } 2432c58f1c22SToby Isaac } 2433c58f1c22SToby Isaac /* Mark ghost points with negative dof */ 2434c58f1c22SToby Isaac for (p = pStart; p < pEnd; ++p) { 2435c58f1c22SToby Isaac PetscInt value; 2436c58f1c22SToby Isaac 24379566063dSJacob Faibussowitsch PetscCall(DMLabelGetValue(label, p, &value)); 2438c58f1c22SToby Isaac if (value != labelValue) continue; 24399566063dSJacob Faibussowitsch PetscCall(PetscSectionGetDof(s, p, &dof)); 24409566063dSJacob Faibussowitsch PetscCall(PetscSectionSetDof(*gsection, p, dof)); 24419566063dSJacob Faibussowitsch PetscCall(PetscSectionGetConstraintDof(s, p, &cdof)); 24429566063dSJacob Faibussowitsch if (!includeConstraints && cdof > 0) PetscCall(PetscSectionSetConstraintDof(*gsection, p, cdof)); 2443c58f1c22SToby Isaac if (neg) neg[p] = -(dof + 1); 2444c58f1c22SToby Isaac } 24459566063dSJacob Faibussowitsch PetscCall(PetscSectionSetUpBC(*gsection)); 2446c58f1c22SToby Isaac if (nroots >= 0) { 24479566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 24489566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 2449c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 24509371c9d4SSatish Balay for (p = pStart; p < pEnd; ++p) { 24519371c9d4SSatish Balay if (tmpOff[p] < 0) (*gsection)->atlasDof[p - pStart] = tmpOff[p]; 24529371c9d4SSatish Balay } 2453c58f1c22SToby Isaac } 2454c58f1c22SToby Isaac } 245535cb6cd3SPierre Jolivet /* Calculate new sizes, get process offset, and calculate point offsets */ 2456c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd - pStart; ++p) { 2457c58f1c22SToby Isaac cdof = (!includeConstraints && s->bc) ? s->bc->atlasDof[p] : 0; 2458c58f1c22SToby Isaac (*gsection)->atlasOff[p] = off; 2459c58f1c22SToby Isaac off += (*gsection)->atlasDof[p] > 0 ? (*gsection)->atlasDof[p] - cdof : 0; 2460c58f1c22SToby Isaac } 24619566063dSJacob Faibussowitsch PetscCallMPI(MPI_Scan(&off, &globalOff, 1, MPIU_INT, MPI_SUM, PetscObjectComm((PetscObject)s))); 2462c58f1c22SToby Isaac globalOff -= off; 2463c58f1c22SToby Isaac for (p = 0, off = 0; p < pEnd - pStart; ++p) { 2464c58f1c22SToby Isaac (*gsection)->atlasOff[p] += globalOff; 2465c58f1c22SToby Isaac if (neg) neg[p] = -((*gsection)->atlasOff[p] + 1); 2466c58f1c22SToby Isaac } 2467c58f1c22SToby Isaac /* Put in negative offsets for ghost points */ 2468c58f1c22SToby Isaac if (nroots >= 0) { 24699566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 24709566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf, MPIU_INT, neg, tmpOff, MPI_REPLACE)); 2471c58f1c22SToby Isaac if (nroots > pEnd - pStart) { 24729371c9d4SSatish Balay for (p = pStart; p < pEnd; ++p) { 24739371c9d4SSatish Balay if (tmpOff[p] < 0) (*gsection)->atlasOff[p - pStart] = tmpOff[p]; 24749371c9d4SSatish Balay } 2475c58f1c22SToby Isaac } 2476c58f1c22SToby Isaac } 24779566063dSJacob Faibussowitsch if (nroots >= 0 && nroots > pEnd - pStart) PetscCall(PetscFree(tmpOff)); 24789566063dSJacob Faibussowitsch PetscCall(PetscFree(neg)); 24793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2480c58f1c22SToby Isaac } 2481c58f1c22SToby Isaac 24829371c9d4SSatish Balay typedef struct _n_PetscSectionSym_Label { 24835fdea053SToby Isaac DMLabel label; 24845fdea053SToby Isaac PetscCopyMode *modes; 24855fdea053SToby Isaac PetscInt *sizes; 24865fdea053SToby Isaac const PetscInt ***perms; 24875fdea053SToby Isaac const PetscScalar ***rots; 24885fdea053SToby Isaac PetscInt (*minMaxOrients)[2]; 24895fdea053SToby Isaac PetscInt numStrata; /* numStrata is only increasing, functions as a state */ 24905fdea053SToby Isaac } PetscSectionSym_Label; 24915fdea053SToby Isaac 2492d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymLabelReset(PetscSectionSym sym) 2493d71ae5a4SJacob Faibussowitsch { 24945fdea053SToby Isaac PetscInt i, j; 24955fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 24965fdea053SToby Isaac 24975fdea053SToby Isaac PetscFunctionBegin; 24985fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 24995fdea053SToby Isaac if (sl->modes[i] == PETSC_OWN_POINTER || sl->modes[i] == PETSC_COPY_VALUES) { 25005fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 25019566063dSJacob Faibussowitsch if (sl->perms[i]) PetscCall(PetscFree(sl->perms[i][j])); 25029566063dSJacob Faibussowitsch if (sl->rots[i]) PetscCall(PetscFree(sl->rots[i][j])); 25035fdea053SToby Isaac } 25045fdea053SToby Isaac if (sl->perms[i]) { 25055fdea053SToby Isaac const PetscInt **perms = &sl->perms[i][sl->minMaxOrients[i][0]]; 25065fdea053SToby Isaac 25079566063dSJacob Faibussowitsch PetscCall(PetscFree(perms)); 25085fdea053SToby Isaac } 25095fdea053SToby Isaac if (sl->rots[i]) { 25105fdea053SToby Isaac const PetscScalar **rots = &sl->rots[i][sl->minMaxOrients[i][0]]; 25115fdea053SToby Isaac 25129566063dSJacob Faibussowitsch PetscCall(PetscFree(rots)); 25135fdea053SToby Isaac } 25145fdea053SToby Isaac } 25155fdea053SToby Isaac } 25169566063dSJacob Faibussowitsch PetscCall(PetscFree5(sl->modes, sl->sizes, sl->perms, sl->rots, sl->minMaxOrients)); 25179566063dSJacob Faibussowitsch PetscCall(DMLabelDestroy(&sl->label)); 25185fdea053SToby Isaac sl->numStrata = 0; 25193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 25205fdea053SToby Isaac } 25215fdea053SToby Isaac 2522d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymDestroy_Label(PetscSectionSym sym) 2523d71ae5a4SJacob Faibussowitsch { 25245fdea053SToby Isaac PetscFunctionBegin; 25259566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelReset(sym)); 25269566063dSJacob Faibussowitsch PetscCall(PetscFree(sym->data)); 25273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 25285fdea053SToby Isaac } 25295fdea053SToby Isaac 2530d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymView_Label(PetscSectionSym sym, PetscViewer viewer) 2531d71ae5a4SJacob Faibussowitsch { 25325fdea053SToby Isaac PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 25335fdea053SToby Isaac PetscBool isAscii; 25345fdea053SToby Isaac DMLabel label = sl->label; 2535d67d17b1SMatthew G. Knepley const char *name; 25365fdea053SToby Isaac 25375fdea053SToby Isaac PetscFunctionBegin; 25389566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isAscii)); 25395fdea053SToby Isaac if (isAscii) { 25405fdea053SToby Isaac PetscInt i, j, k; 25415fdea053SToby Isaac PetscViewerFormat format; 25425fdea053SToby Isaac 25439566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 25445fdea053SToby Isaac if (label) { 25459566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 25465fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 25479566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 25489566063dSJacob Faibussowitsch PetscCall(DMLabelView(label, viewer)); 25499566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 25505fdea053SToby Isaac } else { 25519566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 25529566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Label '%s'\n", name)); 25535fdea053SToby Isaac } 25545fdea053SToby Isaac } else { 25559566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "No label given\n")); 25565fdea053SToby Isaac } 25579566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 25585fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 25595fdea053SToby Isaac PetscInt value = i < sl->numStrata ? label->stratumValues[i] : label->defaultValue; 25605fdea053SToby Isaac 25615fdea053SToby Isaac if (!(sl->perms[i] || sl->rots[i])) { 256263a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %" PetscInt_FMT " (%" PetscInt_FMT " dofs per point): no symmetries\n", value, sl->sizes[i])); 25635fdea053SToby Isaac } else { 256463a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Symmetry for stratum value %" PetscInt_FMT " (%" PetscInt_FMT " dofs per point):\n", value, sl->sizes[i])); 25659566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 256663a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation range: [%" PetscInt_FMT ", %" PetscInt_FMT ")\n", sl->minMaxOrients[i][0], sl->minMaxOrients[i][1])); 25675fdea053SToby Isaac if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 25689566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 25695fdea053SToby Isaac for (j = sl->minMaxOrients[i][0]; j < sl->minMaxOrients[i][1]; j++) { 25705fdea053SToby Isaac if (!((sl->perms[i] && sl->perms[i][j]) || (sl->rots[i] && sl->rots[i][j]))) { 257163a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation %" PetscInt_FMT ": identity\n", j)); 25725fdea053SToby Isaac } else { 25735fdea053SToby Isaac PetscInt tab; 25745fdea053SToby Isaac 257563a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Orientation %" PetscInt_FMT ":\n", j)); 25769566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(viewer)); 25779566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIGetTab(viewer, &tab)); 25785fdea053SToby Isaac if (sl->perms[i] && sl->perms[i][j]) { 25799566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Permutation:")); 25809566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, 0)); 258163a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %" PetscInt_FMT, sl->perms[i][j][k])); 25829566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "\n")); 25839566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, tab)); 25845fdea053SToby Isaac } 25855fdea053SToby Isaac if (sl->rots[i] && sl->rots[i][j]) { 25869566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Rotations: ")); 25879566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, 0)); 25885fdea053SToby Isaac #if defined(PETSC_USE_COMPLEX) 258963a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %+g+i*%+g", (double)PetscRealPart(sl->rots[i][j][k]), (double)PetscImaginaryPart(sl->rots[i][j][k]))); 25905fdea053SToby Isaac #else 259163a3b9bcSJacob Faibussowitsch for (k = 0; k < sl->sizes[i]; k++) PetscCall(PetscViewerASCIIPrintf(viewer, " %+g", (double)sl->rots[i][j][k])); 25925fdea053SToby Isaac #endif 25939566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "\n")); 25949566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISetTab(viewer, tab)); 25955fdea053SToby Isaac } 25969566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 25975fdea053SToby Isaac } 25985fdea053SToby Isaac } 25999566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26005fdea053SToby Isaac } 26019566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26025fdea053SToby Isaac } 26035fdea053SToby Isaac } 26049566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(viewer)); 26055fdea053SToby Isaac } 26063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26075fdea053SToby Isaac } 26085fdea053SToby Isaac 26095fdea053SToby Isaac /*@ 26105fdea053SToby Isaac PetscSectionSymLabelSetLabel - set the label whose strata will define the points that receive symmetries 26115fdea053SToby Isaac 261220f4b53cSBarry Smith Logically 26135fdea053SToby Isaac 261460225df5SJacob Faibussowitsch Input Parameters: 26155fdea053SToby Isaac + sym - the section symmetries 261620f4b53cSBarry Smith - label - the `DMLabel` describing the types of points 26175fdea053SToby Isaac 26185fdea053SToby Isaac Level: developer: 26195fdea053SToby Isaac 262020f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelSetStratum()`, `PetscSectionSymCreateLabel()`, `PetscSectionGetPointSyms()` 26215fdea053SToby Isaac @*/ 2622d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelSetLabel(PetscSectionSym sym, DMLabel label) 2623d71ae5a4SJacob Faibussowitsch { 26245fdea053SToby Isaac PetscSectionSym_Label *sl; 26255fdea053SToby Isaac 26265fdea053SToby Isaac PetscFunctionBegin; 26275fdea053SToby Isaac PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 26285fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 26299566063dSJacob Faibussowitsch if (sl->label && sl->label != label) PetscCall(PetscSectionSymLabelReset(sym)); 26305fdea053SToby Isaac if (label) { 26315fdea053SToby Isaac sl->label = label; 26329566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)label)); 26339566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(label, &sl->numStrata)); 26349566063dSJacob Faibussowitsch PetscCall(PetscMalloc5(sl->numStrata + 1, &sl->modes, sl->numStrata + 1, &sl->sizes, sl->numStrata + 1, &sl->perms, sl->numStrata + 1, &sl->rots, sl->numStrata + 1, &sl->minMaxOrients)); 26359566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->modes, (sl->numStrata + 1) * sizeof(PetscCopyMode))); 26369566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->sizes, (sl->numStrata + 1) * sizeof(PetscInt))); 26379566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->perms, (sl->numStrata + 1) * sizeof(const PetscInt **))); 26389566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->rots, (sl->numStrata + 1) * sizeof(const PetscScalar **))); 26399566063dSJacob Faibussowitsch PetscCall(PetscMemzero((void *)sl->minMaxOrients, (sl->numStrata + 1) * sizeof(PetscInt[2]))); 26405fdea053SToby Isaac } 26413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26425fdea053SToby Isaac } 26435fdea053SToby Isaac 26445fdea053SToby Isaac /*@C 2645b004864fSMatthew G. Knepley PetscSectionSymLabelGetStratum - get the symmetries for the orientations of a stratum 2646b004864fSMatthew G. Knepley 264720f4b53cSBarry Smith Logically Collective 2648b004864fSMatthew G. Knepley 2649b004864fSMatthew G. Knepley Input Parameters: 2650b004864fSMatthew G. Knepley + sym - the section symmetries 2651b004864fSMatthew G. Knepley - stratum - the stratum value in the label that we are assigning symmetries for 2652b004864fSMatthew G. Knepley 2653b004864fSMatthew G. Knepley Output Parameters: 265420f4b53cSBarry Smith + size - the number of dofs for points in the `stratum` of the label 265520f4b53cSBarry Smith . minOrient - the smallest orientation for a point in this `stratum` 265620f4b53cSBarry Smith . maxOrient - one greater than the largest orientation for a ppoint in this `stratum` (i.e., orientations are in the range [`minOrient`, `maxOrient`)) 265720f4b53cSBarry Smith . perms - `NULL` if there are no permutations, or (`maxOrient` - `minOrient`) permutations, one for each orientation. A `NULL` permutation is the identity 265820f4b53cSBarry Smith - rots - `NULL` if there are no rotations, or (`maxOrient` - `minOrient`) sets of rotations, one for each orientation. A `NULL` set of orientations is the identity 2659b004864fSMatthew G. Knepley 2660b004864fSMatthew G. Knepley Level: developer 2661b004864fSMatthew G. Knepley 266220f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelSetStratum()`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetPointSyms()`, `PetscSectionSymCreateLabel()` 2663b004864fSMatthew G. Knepley @*/ 2664d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelGetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt *size, PetscInt *minOrient, PetscInt *maxOrient, const PetscInt ***perms, const PetscScalar ***rots) 2665d71ae5a4SJacob Faibussowitsch { 2666b004864fSMatthew G. Knepley PetscSectionSym_Label *sl; 2667b004864fSMatthew G. Knepley const char *name; 2668b004864fSMatthew G. Knepley PetscInt i; 2669b004864fSMatthew G. Knepley 2670b004864fSMatthew G. Knepley PetscFunctionBegin; 2671b004864fSMatthew G. Knepley PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 2672b004864fSMatthew G. Knepley sl = (PetscSectionSym_Label *)sym->data; 2673b004864fSMatthew G. Knepley PetscCheck(sl->label, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_WRONGSTATE, "No label set yet"); 2674b004864fSMatthew G. Knepley for (i = 0; i <= sl->numStrata; i++) { 2675b004864fSMatthew G. Knepley PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 2676b004864fSMatthew G. Knepley 2677b004864fSMatthew G. Knepley if (stratum == value) break; 2678b004864fSMatthew G. Knepley } 26799566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 2680b004864fSMatthew G. Knepley PetscCheck(i <= sl->numStrata, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_OUTOFRANGE, "Stratum %" PetscInt_FMT " not found in label %s", stratum, name); 26819371c9d4SSatish Balay if (size) { 26824f572ea9SToby Isaac PetscAssertPointer(size, 3); 26839371c9d4SSatish Balay *size = sl->sizes[i]; 26849371c9d4SSatish Balay } 26859371c9d4SSatish Balay if (minOrient) { 26864f572ea9SToby Isaac PetscAssertPointer(minOrient, 4); 26879371c9d4SSatish Balay *minOrient = sl->minMaxOrients[i][0]; 26889371c9d4SSatish Balay } 26899371c9d4SSatish Balay if (maxOrient) { 26904f572ea9SToby Isaac PetscAssertPointer(maxOrient, 5); 26919371c9d4SSatish Balay *maxOrient = sl->minMaxOrients[i][1]; 26929371c9d4SSatish Balay } 26939371c9d4SSatish Balay if (perms) { 26944f572ea9SToby Isaac PetscAssertPointer(perms, 6); 26958e3a54c0SPierre Jolivet *perms = PetscSafePointerPlusOffset(sl->perms[i], sl->minMaxOrients[i][0]); 26969371c9d4SSatish Balay } 26979371c9d4SSatish Balay if (rots) { 26984f572ea9SToby Isaac PetscAssertPointer(rots, 7); 26998e3a54c0SPierre Jolivet *rots = PetscSafePointerPlusOffset(sl->rots[i], sl->minMaxOrients[i][0]); 27009371c9d4SSatish Balay } 27013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2702b004864fSMatthew G. Knepley } 2703b004864fSMatthew G. Knepley 2704b004864fSMatthew G. Knepley /*@C 27055fdea053SToby Isaac PetscSectionSymLabelSetStratum - set the symmetries for the orientations of a stratum 27065fdea053SToby Isaac 270720f4b53cSBarry Smith Logically 27085fdea053SToby Isaac 27095fdea053SToby Isaac Input Parameters: 27105b5e7992SMatthew G. Knepley + sym - the section symmetries 27115fdea053SToby Isaac . stratum - the stratum value in the label that we are assigning symmetries for 271220f4b53cSBarry Smith . size - the number of dofs for points in the `stratum` of the label 271320f4b53cSBarry Smith . minOrient - the smallest orientation for a point in this `stratum` 271420f4b53cSBarry Smith . maxOrient - one greater than the largest orientation for a point in this `stratum` (i.e., orientations are in the range [`minOrient`, `maxOrient`)) 271520f4b53cSBarry Smith . mode - how `sym` should copy the `perms` and `rots` arrays 271620f4b53cSBarry Smith . perms - `NULL` if there are no permutations, or (`maxOrient` - `minOrient`) permutations, one for each orientation. A `NULL` permutation is the identity 271720f4b53cSBarry Smith - rots - `NULL` if there are no rotations, or (`maxOrient` - `minOrient`) sets of rotations, one for each orientation. A `NULL` set of orientations is the identity 27185fdea053SToby Isaac 27195fdea053SToby Isaac Level: developer 27205fdea053SToby Isaac 272120f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymLabelGetStratum()`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetPointSyms()`, `PetscSectionSymCreateLabel()` 27225fdea053SToby Isaac @*/ 2723d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymLabelSetStratum(PetscSectionSym sym, PetscInt stratum, PetscInt size, PetscInt minOrient, PetscInt maxOrient, PetscCopyMode mode, const PetscInt **perms, const PetscScalar **rots) 2724d71ae5a4SJacob Faibussowitsch { 27255fdea053SToby Isaac PetscSectionSym_Label *sl; 2726d67d17b1SMatthew G. Knepley const char *name; 2727d67d17b1SMatthew G. Knepley PetscInt i, j, k; 27285fdea053SToby Isaac 27295fdea053SToby Isaac PetscFunctionBegin; 27305fdea053SToby Isaac PetscValidHeaderSpecific(sym, PETSC_SECTION_SYM_CLASSID, 1); 27315fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 2732b004864fSMatthew G. Knepley PetscCheck(sl->label, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_WRONGSTATE, "No label set yet"); 27335fdea053SToby Isaac for (i = 0; i <= sl->numStrata; i++) { 27345fdea053SToby Isaac PetscInt value = (i < sl->numStrata) ? sl->label->stratumValues[i] : sl->label->defaultValue; 27355fdea053SToby Isaac 27365fdea053SToby Isaac if (stratum == value) break; 27375fdea053SToby Isaac } 27389566063dSJacob Faibussowitsch PetscCall(PetscObjectGetName((PetscObject)sl->label, &name)); 273963a3b9bcSJacob Faibussowitsch PetscCheck(i <= sl->numStrata, PetscObjectComm((PetscObject)sym), PETSC_ERR_ARG_OUTOFRANGE, "Stratum %" PetscInt_FMT " not found in label %s", stratum, name); 27405fdea053SToby Isaac sl->sizes[i] = size; 27415fdea053SToby Isaac sl->modes[i] = mode; 27425fdea053SToby Isaac sl->minMaxOrients[i][0] = minOrient; 27435fdea053SToby Isaac sl->minMaxOrients[i][1] = maxOrient; 27445fdea053SToby Isaac if (mode == PETSC_COPY_VALUES) { 27455fdea053SToby Isaac if (perms) { 27465fdea053SToby Isaac PetscInt **ownPerms; 27475fdea053SToby Isaac 27489566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(maxOrient - minOrient, &ownPerms)); 27495fdea053SToby Isaac for (j = 0; j < maxOrient - minOrient; j++) { 27505fdea053SToby Isaac if (perms[j]) { 27519566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &ownPerms[j])); 2752ad540459SPierre Jolivet for (k = 0; k < size; k++) ownPerms[j][k] = perms[j][k]; 27535fdea053SToby Isaac } 27545fdea053SToby Isaac } 27555fdea053SToby Isaac sl->perms[i] = (const PetscInt **)&ownPerms[-minOrient]; 27565fdea053SToby Isaac } 27575fdea053SToby Isaac if (rots) { 27585fdea053SToby Isaac PetscScalar **ownRots; 27595fdea053SToby Isaac 27609566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(maxOrient - minOrient, &ownRots)); 27615fdea053SToby Isaac for (j = 0; j < maxOrient - minOrient; j++) { 27625fdea053SToby Isaac if (rots[j]) { 27639566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &ownRots[j])); 2764ad540459SPierre Jolivet for (k = 0; k < size; k++) ownRots[j][k] = rots[j][k]; 27655fdea053SToby Isaac } 27665fdea053SToby Isaac } 27675fdea053SToby Isaac sl->rots[i] = (const PetscScalar **)&ownRots[-minOrient]; 27685fdea053SToby Isaac } 27695fdea053SToby Isaac } else { 27708e3a54c0SPierre Jolivet sl->perms[i] = PetscSafePointerPlusOffset(perms, -minOrient); 27718e3a54c0SPierre Jolivet sl->rots[i] = PetscSafePointerPlusOffset(rots, -minOrient); 27725fdea053SToby Isaac } 27733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 27745fdea053SToby Isaac } 27755fdea053SToby Isaac 2776d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymGetPoints_Label(PetscSectionSym sym, PetscSection section, PetscInt numPoints, const PetscInt *points, const PetscInt **perms, const PetscScalar **rots) 2777d71ae5a4SJacob Faibussowitsch { 27785fdea053SToby Isaac PetscInt i, j, numStrata; 27795fdea053SToby Isaac PetscSectionSym_Label *sl; 27805fdea053SToby Isaac DMLabel label; 27815fdea053SToby Isaac 27825fdea053SToby Isaac PetscFunctionBegin; 27835fdea053SToby Isaac sl = (PetscSectionSym_Label *)sym->data; 27845fdea053SToby Isaac numStrata = sl->numStrata; 27855fdea053SToby Isaac label = sl->label; 27865fdea053SToby Isaac for (i = 0; i < numPoints; i++) { 27875fdea053SToby Isaac PetscInt point = points[2 * i]; 27885fdea053SToby Isaac PetscInt ornt = points[2 * i + 1]; 27895fdea053SToby Isaac 27905fdea053SToby Isaac for (j = 0; j < numStrata; j++) { 27915fdea053SToby Isaac if (label->validIS[j]) { 27925fdea053SToby Isaac PetscInt k; 27935fdea053SToby Isaac 27949566063dSJacob Faibussowitsch PetscCall(ISLocate(label->points[j], point, &k)); 27955fdea053SToby Isaac if (k >= 0) break; 27965fdea053SToby Isaac } else { 27975fdea053SToby Isaac PetscBool has; 27985fdea053SToby Isaac 27999566063dSJacob Faibussowitsch PetscCall(PetscHSetIHas(label->ht[j], point, &has)); 28005fdea053SToby Isaac if (has) break; 28015fdea053SToby Isaac } 28025fdea053SToby Isaac } 28039371c9d4SSatish Balay PetscCheck(!(sl->minMaxOrients[j][1] > sl->minMaxOrients[j][0]) || !(ornt < sl->minMaxOrients[j][0] || ornt >= sl->minMaxOrients[j][1]), PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "point %" PetscInt_FMT " orientation %" PetscInt_FMT " not in range [%" PetscInt_FMT ", %" PetscInt_FMT ") for stratum %" PetscInt_FMT, point, ornt, sl->minMaxOrients[j][0], sl->minMaxOrients[j][1], 28049371c9d4SSatish Balay j < numStrata ? label->stratumValues[j] : label->defaultValue); 2805ad540459SPierre Jolivet if (perms) perms[i] = sl->perms[j] ? sl->perms[j][ornt] : NULL; 2806ad540459SPierre Jolivet if (rots) rots[i] = sl->rots[j] ? sl->rots[j][ornt] : NULL; 28075fdea053SToby Isaac } 28083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28095fdea053SToby Isaac } 28105fdea053SToby Isaac 2811d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymCopy_Label(PetscSectionSym sym, PetscSectionSym nsym) 2812d71ae5a4SJacob Faibussowitsch { 2813b004864fSMatthew G. Knepley PetscSectionSym_Label *sl = (PetscSectionSym_Label *)nsym->data; 2814b004864fSMatthew G. Knepley IS valIS; 2815b004864fSMatthew G. Knepley const PetscInt *values; 2816b004864fSMatthew G. Knepley PetscInt Nv, v; 2817b004864fSMatthew G. Knepley 2818b004864fSMatthew G. Knepley PetscFunctionBegin; 28199566063dSJacob Faibussowitsch PetscCall(DMLabelGetNumValues(sl->label, &Nv)); 28209566063dSJacob Faibussowitsch PetscCall(DMLabelGetValueIS(sl->label, &valIS)); 28219566063dSJacob Faibussowitsch PetscCall(ISGetIndices(valIS, &values)); 2822b004864fSMatthew G. Knepley for (v = 0; v < Nv; ++v) { 2823b004864fSMatthew G. Knepley const PetscInt val = values[v]; 2824b004864fSMatthew G. Knepley PetscInt size, minOrient, maxOrient; 2825b004864fSMatthew G. Knepley const PetscInt **perms; 2826b004864fSMatthew G. Knepley const PetscScalar **rots; 2827b004864fSMatthew G. Knepley 28289566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelGetStratum(sym, val, &size, &minOrient, &maxOrient, &perms, &rots)); 28299566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelSetStratum(nsym, val, size, minOrient, maxOrient, PETSC_COPY_VALUES, perms, rots)); 2830b004864fSMatthew G. Knepley } 28319566063dSJacob Faibussowitsch PetscCall(ISDestroy(&valIS)); 28323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2833b004864fSMatthew G. Knepley } 2834b004864fSMatthew G. Knepley 2835d71ae5a4SJacob Faibussowitsch static PetscErrorCode PetscSectionSymDistribute_Label(PetscSectionSym sym, PetscSF migrationSF, PetscSectionSym *dsym) 2836d71ae5a4SJacob Faibussowitsch { 2837b004864fSMatthew G. Knepley PetscSectionSym_Label *sl = (PetscSectionSym_Label *)sym->data; 2838b004864fSMatthew G. Knepley DMLabel dlabel; 2839b004864fSMatthew G. Knepley 2840b004864fSMatthew G. Knepley PetscFunctionBegin; 28419566063dSJacob Faibussowitsch PetscCall(DMLabelDistribute(sl->label, migrationSF, &dlabel)); 28429566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCreateLabel(PetscObjectComm((PetscObject)sym), dlabel, dsym)); 28439566063dSJacob Faibussowitsch PetscCall(DMLabelDestroy(&dlabel)); 28449566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCopy(sym, *dsym)); 28453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2846b004864fSMatthew G. Knepley } 2847b004864fSMatthew G. Knepley 2848d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymCreate_Label(PetscSectionSym sym) 2849d71ae5a4SJacob Faibussowitsch { 28505fdea053SToby Isaac PetscSectionSym_Label *sl; 28515fdea053SToby Isaac 28525fdea053SToby Isaac PetscFunctionBegin; 28534dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&sl)); 28545fdea053SToby Isaac sym->ops->getpoints = PetscSectionSymGetPoints_Label; 2855b004864fSMatthew G. Knepley sym->ops->distribute = PetscSectionSymDistribute_Label; 2856b004864fSMatthew G. Knepley sym->ops->copy = PetscSectionSymCopy_Label; 28575fdea053SToby Isaac sym->ops->view = PetscSectionSymView_Label; 28585fdea053SToby Isaac sym->ops->destroy = PetscSectionSymDestroy_Label; 28595fdea053SToby Isaac sym->data = (void *)sl; 28603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28615fdea053SToby Isaac } 28625fdea053SToby Isaac 28635fdea053SToby Isaac /*@ 28645fdea053SToby Isaac PetscSectionSymCreateLabel - Create a section symmetry that assigns one symmetry to each stratum of a label 28655fdea053SToby Isaac 28665fdea053SToby Isaac Collective 28675fdea053SToby Isaac 28685fdea053SToby Isaac Input Parameters: 28695fdea053SToby Isaac + comm - the MPI communicator for the new symmetry 28705fdea053SToby Isaac - label - the label defining the strata 28715fdea053SToby Isaac 28722fe279fdSBarry Smith Output Parameter: 28735fdea053SToby Isaac . sym - the section symmetries 28745fdea053SToby Isaac 28755fdea053SToby Isaac Level: developer 28765fdea053SToby Isaac 287720f4b53cSBarry Smith .seealso: `DMLabel`, `DM`, `PetscSectionSymCreate()`, `PetscSectionSetSym()`, `PetscSectionGetSym()`, `PetscSectionSymLabelSetStratum()`, `PetscSectionGetPointSyms()` 28785fdea053SToby Isaac @*/ 2879d71ae5a4SJacob Faibussowitsch PetscErrorCode PetscSectionSymCreateLabel(MPI_Comm comm, DMLabel label, PetscSectionSym *sym) 2880d71ae5a4SJacob Faibussowitsch { 28815fdea053SToby Isaac PetscFunctionBegin; 28829566063dSJacob Faibussowitsch PetscCall(DMInitializePackage()); 28839566063dSJacob Faibussowitsch PetscCall(PetscSectionSymCreate(comm, sym)); 28849566063dSJacob Faibussowitsch PetscCall(PetscSectionSymSetType(*sym, PETSCSECTIONSYMLABEL)); 28859566063dSJacob Faibussowitsch PetscCall(PetscSectionSymLabelSetLabel(*sym, label)); 28863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28875fdea053SToby Isaac } 2888