1*abe9303eSLisandro Dalcin #include <petscvec.h> 2*abe9303eSLisandro Dalcin #include <petsc/private/partitionerimpl.h> /*I "petscpartitioner.h" I*/ 3*abe9303eSLisandro Dalcin 4*abe9303eSLisandro Dalcin typedef struct { 5*abe9303eSLisandro Dalcin PetscInt dummy; 6*abe9303eSLisandro Dalcin } PetscPartitioner_Simple; 7*abe9303eSLisandro Dalcin 8*abe9303eSLisandro Dalcin static PetscErrorCode PetscPartitionerDestroy_Simple(PetscPartitioner part) 9*abe9303eSLisandro Dalcin { 10*abe9303eSLisandro Dalcin PetscErrorCode ierr; 11*abe9303eSLisandro Dalcin 12*abe9303eSLisandro Dalcin PetscFunctionBegin; 13*abe9303eSLisandro Dalcin ierr = PetscFree(part->data);CHKERRQ(ierr); 14*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 15*abe9303eSLisandro Dalcin } 16*abe9303eSLisandro Dalcin 17*abe9303eSLisandro Dalcin static PetscErrorCode PetscPartitionerView_Simple_ASCII(PetscPartitioner part, PetscViewer viewer) 18*abe9303eSLisandro Dalcin { 19*abe9303eSLisandro Dalcin PetscFunctionBegin; 20*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 21*abe9303eSLisandro Dalcin } 22*abe9303eSLisandro Dalcin 23*abe9303eSLisandro Dalcin static PetscErrorCode PetscPartitionerView_Simple(PetscPartitioner part, PetscViewer viewer) 24*abe9303eSLisandro Dalcin { 25*abe9303eSLisandro Dalcin PetscBool iascii; 26*abe9303eSLisandro Dalcin PetscErrorCode ierr; 27*abe9303eSLisandro Dalcin 28*abe9303eSLisandro Dalcin PetscFunctionBegin; 29*abe9303eSLisandro Dalcin PetscValidHeaderSpecific(part, PETSCPARTITIONER_CLASSID, 1); 30*abe9303eSLisandro Dalcin PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 31*abe9303eSLisandro Dalcin ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii);CHKERRQ(ierr); 32*abe9303eSLisandro Dalcin if (iascii) {ierr = PetscPartitionerView_Simple_ASCII(part, viewer);CHKERRQ(ierr);} 33*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 34*abe9303eSLisandro Dalcin } 35*abe9303eSLisandro Dalcin 36*abe9303eSLisandro Dalcin static PetscErrorCode PetscPartitionerPartition_Simple(PetscPartitioner part, PetscInt nparts, PetscInt numVertices, PetscInt start[], PetscInt adjacency[], PetscSection vertSection, PetscSection targetSection, PetscSection partSection, IS *partition) 37*abe9303eSLisandro Dalcin { 38*abe9303eSLisandro Dalcin MPI_Comm comm; 39*abe9303eSLisandro Dalcin PetscInt np, *tpwgts = NULL, sumw = 0, numVerticesGlobal = 0; 40*abe9303eSLisandro Dalcin PetscMPIInt size; 41*abe9303eSLisandro Dalcin PetscErrorCode ierr; 42*abe9303eSLisandro Dalcin 43*abe9303eSLisandro Dalcin PetscFunctionBegin; 44*abe9303eSLisandro Dalcin if (vertSection) { ierr = PetscInfo(part,"PETSCPARTITIONERSIMPLE ignores vertex weights\n");CHKERRQ(ierr); } 45*abe9303eSLisandro Dalcin comm = PetscObjectComm((PetscObject)part); 46*abe9303eSLisandro Dalcin ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 47*abe9303eSLisandro Dalcin if (targetSection) { 48*abe9303eSLisandro Dalcin ierr = MPIU_Allreduce(&numVertices, &numVerticesGlobal, 1, MPIU_INT, MPI_SUM, comm);CHKERRQ(ierr); 49*abe9303eSLisandro Dalcin ierr = PetscCalloc1(nparts,&tpwgts);CHKERRQ(ierr); 50*abe9303eSLisandro Dalcin for (np = 0; np < nparts; ++np) { 51*abe9303eSLisandro Dalcin ierr = PetscSectionGetDof(targetSection,np,&tpwgts[np]);CHKERRQ(ierr); 52*abe9303eSLisandro Dalcin sumw += tpwgts[np]; 53*abe9303eSLisandro Dalcin } 54*abe9303eSLisandro Dalcin if (!sumw) { 55*abe9303eSLisandro Dalcin ierr = PetscFree(tpwgts);CHKERRQ(ierr); 56*abe9303eSLisandro Dalcin } else { 57*abe9303eSLisandro Dalcin PetscInt m,mp; 58*abe9303eSLisandro Dalcin for (np = 0; np < nparts; ++np) tpwgts[np] = (tpwgts[np]*numVerticesGlobal)/sumw; 59*abe9303eSLisandro Dalcin for (np = 0, m = -1, mp = 0, sumw = 0; np < nparts; ++np) { 60*abe9303eSLisandro Dalcin if (m < tpwgts[np]) { m = tpwgts[np]; mp = np; } 61*abe9303eSLisandro Dalcin sumw += tpwgts[np]; 62*abe9303eSLisandro Dalcin } 63*abe9303eSLisandro Dalcin if (sumw != numVerticesGlobal) tpwgts[mp] += numVerticesGlobal - sumw; 64*abe9303eSLisandro Dalcin } 65*abe9303eSLisandro Dalcin } 66*abe9303eSLisandro Dalcin 67*abe9303eSLisandro Dalcin ierr = ISCreateStride(PETSC_COMM_SELF, numVertices, 0, 1, partition);CHKERRQ(ierr); 68*abe9303eSLisandro Dalcin if (size == 1) { 69*abe9303eSLisandro Dalcin if (tpwgts) { 70*abe9303eSLisandro Dalcin for (np = 0; np < nparts; ++np) { 71*abe9303eSLisandro Dalcin ierr = PetscSectionSetDof(partSection, np, tpwgts[np]);CHKERRQ(ierr); 72*abe9303eSLisandro Dalcin } 73*abe9303eSLisandro Dalcin } else { 74*abe9303eSLisandro Dalcin for (np = 0; np < nparts; ++np) { 75*abe9303eSLisandro Dalcin ierr = PetscSectionSetDof(partSection, np, numVertices/nparts + ((numVertices % nparts) > np));CHKERRQ(ierr); 76*abe9303eSLisandro Dalcin } 77*abe9303eSLisandro Dalcin } 78*abe9303eSLisandro Dalcin } else { 79*abe9303eSLisandro Dalcin if (tpwgts) { 80*abe9303eSLisandro Dalcin Vec v; 81*abe9303eSLisandro Dalcin PetscScalar *array; 82*abe9303eSLisandro Dalcin PetscInt st,j; 83*abe9303eSLisandro Dalcin PetscMPIInt rank; 84*abe9303eSLisandro Dalcin 85*abe9303eSLisandro Dalcin ierr = VecCreate(comm,&v);CHKERRQ(ierr); 86*abe9303eSLisandro Dalcin ierr = VecSetSizes(v,numVertices,numVerticesGlobal);CHKERRQ(ierr); 87*abe9303eSLisandro Dalcin ierr = VecSetType(v,VECSTANDARD);CHKERRQ(ierr); 88*abe9303eSLisandro Dalcin ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 89*abe9303eSLisandro Dalcin for (np = 0,st = 0; np < nparts; ++np) { 90*abe9303eSLisandro Dalcin if (rank == np || (rank == size-1 && size < nparts && np >= size)) { 91*abe9303eSLisandro Dalcin for (j = 0; j < tpwgts[np]; j++) { 92*abe9303eSLisandro Dalcin ierr = VecSetValue(v,st+j,np,INSERT_VALUES);CHKERRQ(ierr); 93*abe9303eSLisandro Dalcin } 94*abe9303eSLisandro Dalcin } 95*abe9303eSLisandro Dalcin st += tpwgts[np]; 96*abe9303eSLisandro Dalcin } 97*abe9303eSLisandro Dalcin ierr = VecAssemblyBegin(v);CHKERRQ(ierr); 98*abe9303eSLisandro Dalcin ierr = VecAssemblyEnd(v);CHKERRQ(ierr); 99*abe9303eSLisandro Dalcin ierr = VecGetArray(v,&array);CHKERRQ(ierr); 100*abe9303eSLisandro Dalcin for (j = 0; j < numVertices; ++j) { 101*abe9303eSLisandro Dalcin ierr = PetscSectionAddDof(partSection,PetscRealPart(array[j]),1);CHKERRQ(ierr); 102*abe9303eSLisandro Dalcin } 103*abe9303eSLisandro Dalcin ierr = VecRestoreArray(v,&array);CHKERRQ(ierr); 104*abe9303eSLisandro Dalcin ierr = VecDestroy(&v);CHKERRQ(ierr); 105*abe9303eSLisandro Dalcin } else { 106*abe9303eSLisandro Dalcin PetscMPIInt rank; 107*abe9303eSLisandro Dalcin PetscInt nvGlobal, *offsets, myFirst, myLast; 108*abe9303eSLisandro Dalcin 109*abe9303eSLisandro Dalcin ierr = PetscMalloc1(size+1,&offsets);CHKERRQ(ierr); 110*abe9303eSLisandro Dalcin offsets[0] = 0; 111*abe9303eSLisandro Dalcin ierr = MPI_Allgather(&numVertices,1,MPIU_INT,&offsets[1],1,MPIU_INT,comm);CHKERRQ(ierr); 112*abe9303eSLisandro Dalcin for (np = 2; np <= size; np++) { 113*abe9303eSLisandro Dalcin offsets[np] += offsets[np-1]; 114*abe9303eSLisandro Dalcin } 115*abe9303eSLisandro Dalcin nvGlobal = offsets[size]; 116*abe9303eSLisandro Dalcin ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 117*abe9303eSLisandro Dalcin myFirst = offsets[rank]; 118*abe9303eSLisandro Dalcin myLast = offsets[rank + 1] - 1; 119*abe9303eSLisandro Dalcin ierr = PetscFree(offsets);CHKERRQ(ierr); 120*abe9303eSLisandro Dalcin if (numVertices) { 121*abe9303eSLisandro Dalcin PetscInt firstPart = 0, firstLargePart = 0; 122*abe9303eSLisandro Dalcin PetscInt lastPart = 0, lastLargePart = 0; 123*abe9303eSLisandro Dalcin PetscInt rem = nvGlobal % nparts; 124*abe9303eSLisandro Dalcin PetscInt pSmall = nvGlobal/nparts; 125*abe9303eSLisandro Dalcin PetscInt pBig = nvGlobal/nparts + 1; 126*abe9303eSLisandro Dalcin 127*abe9303eSLisandro Dalcin if (rem) { 128*abe9303eSLisandro Dalcin firstLargePart = myFirst / pBig; 129*abe9303eSLisandro Dalcin lastLargePart = myLast / pBig; 130*abe9303eSLisandro Dalcin 131*abe9303eSLisandro Dalcin if (firstLargePart < rem) { 132*abe9303eSLisandro Dalcin firstPart = firstLargePart; 133*abe9303eSLisandro Dalcin } else { 134*abe9303eSLisandro Dalcin firstPart = rem + (myFirst - (rem * pBig)) / pSmall; 135*abe9303eSLisandro Dalcin } 136*abe9303eSLisandro Dalcin if (lastLargePart < rem) { 137*abe9303eSLisandro Dalcin lastPart = lastLargePart; 138*abe9303eSLisandro Dalcin } else { 139*abe9303eSLisandro Dalcin lastPart = rem + (myLast - (rem * pBig)) / pSmall; 140*abe9303eSLisandro Dalcin } 141*abe9303eSLisandro Dalcin } else { 142*abe9303eSLisandro Dalcin firstPart = myFirst / (nvGlobal/nparts); 143*abe9303eSLisandro Dalcin lastPart = myLast / (nvGlobal/nparts); 144*abe9303eSLisandro Dalcin } 145*abe9303eSLisandro Dalcin 146*abe9303eSLisandro Dalcin for (np = firstPart; np <= lastPart; np++) { 147*abe9303eSLisandro Dalcin PetscInt PartStart = np * (nvGlobal/nparts) + PetscMin(nvGlobal % nparts,np); 148*abe9303eSLisandro Dalcin PetscInt PartEnd = (np+1) * (nvGlobal/nparts) + PetscMin(nvGlobal % nparts,np+1); 149*abe9303eSLisandro Dalcin 150*abe9303eSLisandro Dalcin PartStart = PetscMax(PartStart,myFirst); 151*abe9303eSLisandro Dalcin PartEnd = PetscMin(PartEnd,myLast+1); 152*abe9303eSLisandro Dalcin ierr = PetscSectionSetDof(partSection,np,PartEnd-PartStart);CHKERRQ(ierr); 153*abe9303eSLisandro Dalcin } 154*abe9303eSLisandro Dalcin } 155*abe9303eSLisandro Dalcin } 156*abe9303eSLisandro Dalcin } 157*abe9303eSLisandro Dalcin ierr = PetscFree(tpwgts);CHKERRQ(ierr); 158*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 159*abe9303eSLisandro Dalcin } 160*abe9303eSLisandro Dalcin 161*abe9303eSLisandro Dalcin static PetscErrorCode PetscPartitionerInitialize_Simple(PetscPartitioner part) 162*abe9303eSLisandro Dalcin { 163*abe9303eSLisandro Dalcin PetscFunctionBegin; 164*abe9303eSLisandro Dalcin part->noGraph = PETSC_TRUE; 165*abe9303eSLisandro Dalcin part->ops->view = PetscPartitionerView_Simple; 166*abe9303eSLisandro Dalcin part->ops->destroy = PetscPartitionerDestroy_Simple; 167*abe9303eSLisandro Dalcin part->ops->partition = PetscPartitionerPartition_Simple; 168*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 169*abe9303eSLisandro Dalcin } 170*abe9303eSLisandro Dalcin 171*abe9303eSLisandro Dalcin /*MC 172*abe9303eSLisandro Dalcin PETSCPARTITIONERSIMPLE = "simple" - A PetscPartitioner object 173*abe9303eSLisandro Dalcin 174*abe9303eSLisandro Dalcin Level: intermediate 175*abe9303eSLisandro Dalcin 176*abe9303eSLisandro Dalcin .seealso: PetscPartitionerType, PetscPartitionerCreate(), PetscPartitionerSetType() 177*abe9303eSLisandro Dalcin M*/ 178*abe9303eSLisandro Dalcin 179*abe9303eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscPartitionerCreate_Simple(PetscPartitioner part) 180*abe9303eSLisandro Dalcin { 181*abe9303eSLisandro Dalcin PetscPartitioner_Simple *p; 182*abe9303eSLisandro Dalcin PetscErrorCode ierr; 183*abe9303eSLisandro Dalcin 184*abe9303eSLisandro Dalcin PetscFunctionBegin; 185*abe9303eSLisandro Dalcin PetscValidHeaderSpecific(part, PETSCPARTITIONER_CLASSID, 1); 186*abe9303eSLisandro Dalcin ierr = PetscNewLog(part, &p);CHKERRQ(ierr); 187*abe9303eSLisandro Dalcin part->data = p; 188*abe9303eSLisandro Dalcin 189*abe9303eSLisandro Dalcin ierr = PetscPartitionerInitialize_Simple(part);CHKERRQ(ierr); 190*abe9303eSLisandro Dalcin PetscFunctionReturn(0); 191*abe9303eSLisandro Dalcin } 192