1c4762a1bSJed Brown static char help[] = "Tests various 3-dimensional DMDA routines.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdm.h> 4c4762a1bSJed Brown #include <petscdmda.h> 5c4762a1bSJed Brown #include <petscao.h> 6c4762a1bSJed Brown 7c4762a1bSJed Brown int main(int argc,char **argv) 8c4762a1bSJed Brown { 9c4762a1bSJed Brown PetscMPIInt rank; 10c4762a1bSJed Brown PetscInt M = 3,N = 5,P=3,s=1,w=2,nloc,l,i,j,k,kk,m = PETSC_DECIDE,n = PETSC_DECIDE,p = PETSC_DECIDE; 11c4762a1bSJed Brown PetscInt Xs,Xm,Ys,Ym,Zs,Zm,iloc,*iglobal; 12c4762a1bSJed Brown const PetscInt *ltog; 13c4762a1bSJed Brown PetscInt *lx = NULL,*ly = NULL,*lz = NULL; 14c4762a1bSJed Brown PetscBool test_order = PETSC_FALSE; 15c4762a1bSJed Brown DM da; 16c4762a1bSJed Brown PetscViewer viewer; 17c4762a1bSJed Brown Vec local,global; 18c4762a1bSJed Brown PetscScalar value; 19c4762a1bSJed Brown DMBoundaryType bx = DM_BOUNDARY_NONE,by = DM_BOUNDARY_NONE,bz = DM_BOUNDARY_NONE; 20c4762a1bSJed Brown DMDAStencilType stencil_type = DMDA_STENCIL_BOX; 21c4762a1bSJed Brown AO ao; 22c4762a1bSJed Brown PetscBool flg = PETSC_FALSE; 23c4762a1bSJed Brown 249566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc,&argv,(char*)0,help)); 259566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawOpen(PETSC_COMM_WORLD,0,"",300,0,400,300,&viewer)); 26c4762a1bSJed Brown 27c4762a1bSJed Brown /* Read options */ 289566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-NX",&M,NULL)); 299566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-NY",&N,NULL)); 309566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-NZ",&P,NULL)); 319566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-m",&m,NULL)); 329566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL)); 339566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-p",&p,NULL)); 349566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-s",&s,NULL)); 359566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,NULL,"-w",&w,NULL)); 36c4762a1bSJed Brown flg = PETSC_FALSE; 379566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-star",&flg,NULL)); 38c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_STAR; 39c4762a1bSJed Brown flg = PETSC_FALSE; 409566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-box",&flg,NULL)); 41c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_BOX; 42c4762a1bSJed Brown 43c4762a1bSJed Brown flg = PETSC_FALSE; 449566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-xperiodic",&flg,NULL)); 45c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_PERIODIC; 46c4762a1bSJed Brown flg = PETSC_FALSE; 479566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-xghosted",&flg,NULL)); 48c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_GHOSTED; 49c4762a1bSJed Brown flg = PETSC_FALSE; 509566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-xnonghosted",&flg,NULL)); 51c4762a1bSJed Brown 52c4762a1bSJed Brown flg = PETSC_FALSE; 539566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-yperiodic",&flg,NULL)); 54c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_PERIODIC; 55c4762a1bSJed Brown flg = PETSC_FALSE; 569566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-yghosted",&flg,NULL)); 57c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_GHOSTED; 58c4762a1bSJed Brown flg = PETSC_FALSE; 599566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-ynonghosted",&flg,NULL)); 60c4762a1bSJed Brown 61c4762a1bSJed Brown flg = PETSC_FALSE; 629566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-zperiodic",&flg,NULL)); 63c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_PERIODIC; 64c4762a1bSJed Brown flg = PETSC_FALSE; 659566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-zghosted",&flg,NULL)); 66c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_GHOSTED; 67c4762a1bSJed Brown flg = PETSC_FALSE; 689566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-znonghosted",&flg,NULL)); 69c4762a1bSJed Brown 709566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-testorder",&test_order,NULL)); 71c4762a1bSJed Brown 72c4762a1bSJed Brown flg = PETSC_FALSE; 739566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-distribute",&flg,NULL)); 74c4762a1bSJed Brown if (flg) { 75*08401ef6SPierre Jolivet PetscCheck(m != PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -m option with -distribute option"); 769566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&lx)); 77c4762a1bSJed Brown for (i=0; i<m-1; i++) lx[i] = 4; 78c4762a1bSJed Brown lx[m-1] = M - 4*(m-1); 79*08401ef6SPierre Jolivet PetscCheck(n != PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -n option with -distribute option"); 809566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n,&ly)); 81c4762a1bSJed Brown for (i=0; i<n-1; i++) ly[i] = 2; 82c4762a1bSJed Brown ly[n-1] = N - 2*(n-1); 83*08401ef6SPierre Jolivet PetscCheck(p != PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -p option with -distribute option"); 849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(p,&lz)); 85c4762a1bSJed Brown for (i=0; i<p-1; i++) lz[i] = 2; 86c4762a1bSJed Brown lz[p-1] = P - 2*(p-1); 87c4762a1bSJed Brown } 88c4762a1bSJed Brown 89c4762a1bSJed Brown /* Create distributed array and get vectors */ 909566063dSJacob Faibussowitsch PetscCall(DMDACreate3d(PETSC_COMM_WORLD,bx,by,bz,stencil_type,M,N,P,m,n,p,w,s,lx,ly,lz,&da)); 919566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(da)); 929566063dSJacob Faibussowitsch PetscCall(DMSetUp(da)); 939566063dSJacob Faibussowitsch PetscCall(PetscFree(lx)); 949566063dSJacob Faibussowitsch PetscCall(PetscFree(ly)); 959566063dSJacob Faibussowitsch PetscCall(PetscFree(lz)); 969566063dSJacob Faibussowitsch PetscCall(DMView(da,viewer)); 979566063dSJacob Faibussowitsch PetscCall(DMCreateGlobalVector(da,&global)); 989566063dSJacob Faibussowitsch PetscCall(DMCreateLocalVector(da,&local)); 99c4762a1bSJed Brown 100c4762a1bSJed Brown /* Set global vector; send ghost points to local vectors */ 101c4762a1bSJed Brown value = 1; 1029566063dSJacob Faibussowitsch PetscCall(VecSet(global,value)); 1039566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da,global,INSERT_VALUES,local)); 1049566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da,global,INSERT_VALUES,local)); 105c4762a1bSJed Brown 106c4762a1bSJed Brown /* Scale local vectors according to processor rank; pass to global vector */ 1079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD,&rank)); 108c4762a1bSJed Brown value = rank; 1099566063dSJacob Faibussowitsch PetscCall(VecScale(local,value)); 1109566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(da,local,INSERT_VALUES,global)); 1119566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(da,local,INSERT_VALUES,global)); 112c4762a1bSJed Brown 113c4762a1bSJed Brown if (!test_order) { /* turn off printing when testing ordering mappings */ 114c4762a1bSJed Brown if (M*N*P<40) { 1159566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nGlobal Vector:\n")); 1169566063dSJacob Faibussowitsch PetscCall(VecView(global,PETSC_VIEWER_STDOUT_WORLD)); 1179566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\n")); 118c4762a1bSJed Brown } 119c4762a1bSJed Brown } 120c4762a1bSJed Brown 121c4762a1bSJed Brown /* Send ghost points to local vectors */ 1229566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da,global,INSERT_VALUES,local)); 1239566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da,global,INSERT_VALUES,local)); 124c4762a1bSJed Brown 125c4762a1bSJed Brown flg = PETSC_FALSE; 1269566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,NULL,"-local_print",&flg,NULL)); 127c4762a1bSJed Brown if (flg) { 128c4762a1bSJed Brown PetscViewer sviewer; 1299566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(PETSC_VIEWER_STDOUT_WORLD)); 1309566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(PETSC_COMM_WORLD,"\nLocal Vector: processor %d\n",rank)); 1319566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer)); 1329566063dSJacob Faibussowitsch PetscCall(VecView(local,sviewer)); 1339566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer)); 1349566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT)); 1359566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(PETSC_VIEWER_STDOUT_WORLD)); 136c4762a1bSJed Brown } 137c4762a1bSJed Brown 138a5b23f4aSJose E. Roman /* Tests mappings between application/PETSc orderings */ 139c4762a1bSJed Brown if (test_order) { 140c4762a1bSJed Brown ISLocalToGlobalMapping ltogm; 141c4762a1bSJed Brown 1429566063dSJacob Faibussowitsch PetscCall(DMGetLocalToGlobalMapping(da,<ogm)); 1439566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogm,&nloc)); 1449566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltogm,<og)); 145c4762a1bSJed Brown 1469566063dSJacob Faibussowitsch PetscCall(DMDAGetGhostCorners(da,&Xs,&Ys,&Zs,&Xm,&Ym,&Zm)); 1479566063dSJacob Faibussowitsch PetscCall(DMDAGetAO(da,&ao)); 1489566063dSJacob Faibussowitsch /* PetscCall(AOView(ao,PETSC_VIEWER_STDOUT_WORLD)); */ 1499566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nloc,&iglobal)); 150c4762a1bSJed Brown 151c4762a1bSJed Brown /* Set iglobal to be global indices for each processor's local and ghost nodes, 152c4762a1bSJed Brown using the DMDA ordering of grid points */ 153c4762a1bSJed Brown kk = 0; 154c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 155c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 156c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 157c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 158c4762a1bSJed Brown for (l=0; l<w; l++) { 159c4762a1bSJed Brown iglobal[kk++] = ltog[iloc+l]; 160c4762a1bSJed Brown } 161c4762a1bSJed Brown } 162c4762a1bSJed Brown } 163c4762a1bSJed Brown } 164c4762a1bSJed Brown 165c4762a1bSJed Brown /* Map this to the application ordering (which for DMDAs is just the natural ordering 166c4762a1bSJed Brown that would be used for 1 processor, numbering most rapidly by x, then y, then z) */ 1679566063dSJacob Faibussowitsch PetscCall(AOPetscToApplication(ao,nloc,iglobal)); 168c4762a1bSJed Brown 169c4762a1bSJed Brown /* Then map the application ordering back to the PETSc DMDA ordering */ 1709566063dSJacob Faibussowitsch PetscCall(AOApplicationToPetsc(ao,nloc,iglobal)); 171c4762a1bSJed Brown 172c4762a1bSJed Brown /* Verify the mappings */ 173c4762a1bSJed Brown kk=0; 174c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 175c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 176c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 177c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 178c4762a1bSJed Brown for (l=0; l<w; l++) { 179c4762a1bSJed Brown if (iglobal[kk] != ltog[iloc+l]) { 1809566063dSJacob Faibussowitsch PetscCall(PetscPrintf(MPI_COMM_WORLD,"[%D] Problem with mapping: z=%D, j=%D, i=%D, l=%D, petsc1=%D, petsc2=%D\n",rank,k,j,i,l,ltog[iloc+l],iglobal[kk])); 181c4762a1bSJed Brown } 182c4762a1bSJed Brown kk++; 183c4762a1bSJed Brown } 184c4762a1bSJed Brown } 185c4762a1bSJed Brown } 186c4762a1bSJed Brown } 1879566063dSJacob Faibussowitsch PetscCall(PetscFree(iglobal)); 1889566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltogm,<og)); 189c4762a1bSJed Brown } 190c4762a1bSJed Brown 191c4762a1bSJed Brown /* Free memory */ 1929566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&viewer)); 1939566063dSJacob Faibussowitsch PetscCall(VecDestroy(&local)); 1949566063dSJacob Faibussowitsch PetscCall(VecDestroy(&global)); 1959566063dSJacob Faibussowitsch PetscCall(DMDestroy(&da)); 1969566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 197b122ec5aSJacob Faibussowitsch return 0; 198c4762a1bSJed Brown } 199c4762a1bSJed Brown 200c4762a1bSJed Brown /*TEST 201c4762a1bSJed Brown 202c4762a1bSJed Brown test: 203c4762a1bSJed Brown args: -testorder -nox 204c4762a1bSJed Brown 205c4762a1bSJed Brown TEST*/ 206