1c4762a1bSJed Brown static char help[] = "Tests various 3-dimensional DMDA routines.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdm.h> 4c4762a1bSJed Brown #include <petscdmda.h> 5c4762a1bSJed Brown #include <petscao.h> 6c4762a1bSJed Brown 7c4762a1bSJed Brown int main(int argc,char **argv) 8c4762a1bSJed Brown { 9c4762a1bSJed Brown PetscMPIInt rank; 10c4762a1bSJed Brown PetscInt M = 3,N = 5,P=3,s=1,w=2,nloc,l,i,j,k,kk,m = PETSC_DECIDE,n = PETSC_DECIDE,p = PETSC_DECIDE; 11c4762a1bSJed Brown PetscErrorCode ierr; 12c4762a1bSJed Brown PetscInt Xs,Xm,Ys,Ym,Zs,Zm,iloc,*iglobal; 13c4762a1bSJed Brown const PetscInt *ltog; 14c4762a1bSJed Brown PetscInt *lx = NULL,*ly = NULL,*lz = NULL; 15c4762a1bSJed Brown PetscBool test_order = PETSC_FALSE; 16c4762a1bSJed Brown DM da; 17c4762a1bSJed Brown PetscViewer viewer; 18c4762a1bSJed Brown Vec local,global; 19c4762a1bSJed Brown PetscScalar value; 20c4762a1bSJed Brown DMBoundaryType bx = DM_BOUNDARY_NONE,by = DM_BOUNDARY_NONE,bz = DM_BOUNDARY_NONE; 21c4762a1bSJed Brown DMDAStencilType stencil_type = DMDA_STENCIL_BOX; 22c4762a1bSJed Brown AO ao; 23c4762a1bSJed Brown PetscBool flg = PETSC_FALSE; 24c4762a1bSJed Brown 25c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 26c4762a1bSJed Brown ierr = PetscViewerDrawOpen(PETSC_COMM_WORLD,0,"",300,0,400,300,&viewer);CHKERRQ(ierr); 27c4762a1bSJed Brown 28c4762a1bSJed Brown /* Read options */ 29c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NX",&M,NULL);CHKERRQ(ierr); 30c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NY",&N,NULL);CHKERRQ(ierr); 31c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NZ",&P,NULL);CHKERRQ(ierr); 32c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-m",&m,NULL);CHKERRQ(ierr); 33c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL);CHKERRQ(ierr); 34c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-p",&p,NULL);CHKERRQ(ierr); 35c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-s",&s,NULL);CHKERRQ(ierr); 36c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-w",&w,NULL);CHKERRQ(ierr); 37c4762a1bSJed Brown flg = PETSC_FALSE; 38c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-star",&flg,NULL);CHKERRQ(ierr); 39c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_STAR; 40c4762a1bSJed Brown flg = PETSC_FALSE; 41c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-box",&flg,NULL);CHKERRQ(ierr); 42c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_BOX; 43c4762a1bSJed Brown 44c4762a1bSJed Brown flg = PETSC_FALSE; 45c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xperiodic",&flg,NULL);CHKERRQ(ierr); 46c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_PERIODIC; 47c4762a1bSJed Brown flg = PETSC_FALSE; 48c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xghosted",&flg,NULL);CHKERRQ(ierr); 49c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_GHOSTED; 50c4762a1bSJed Brown flg = PETSC_FALSE; 51c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xnonghosted",&flg,NULL);CHKERRQ(ierr); 52c4762a1bSJed Brown 53c4762a1bSJed Brown flg = PETSC_FALSE; 54c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-yperiodic",&flg,NULL);CHKERRQ(ierr); 55c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_PERIODIC; 56c4762a1bSJed Brown flg = PETSC_FALSE; 57c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-yghosted",&flg,NULL);CHKERRQ(ierr); 58c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_GHOSTED; 59c4762a1bSJed Brown flg = PETSC_FALSE; 60c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-ynonghosted",&flg,NULL);CHKERRQ(ierr); 61c4762a1bSJed Brown 62c4762a1bSJed Brown flg = PETSC_FALSE; 63c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-zperiodic",&flg,NULL);CHKERRQ(ierr); 64c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_PERIODIC; 65c4762a1bSJed Brown flg = PETSC_FALSE; 66c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-zghosted",&flg,NULL);CHKERRQ(ierr); 67c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_GHOSTED; 68c4762a1bSJed Brown flg = PETSC_FALSE; 69c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-znonghosted",&flg,NULL);CHKERRQ(ierr); 70c4762a1bSJed Brown 71c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-testorder",&test_order,NULL);CHKERRQ(ierr); 72c4762a1bSJed Brown 73c4762a1bSJed Brown flg = PETSC_FALSE; 74c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-distribute",&flg,NULL);CHKERRQ(ierr); 75c4762a1bSJed Brown if (flg) { 76*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(m == PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -m option with -distribute option"); 77c4762a1bSJed Brown ierr = PetscMalloc1(m,&lx);CHKERRQ(ierr); 78c4762a1bSJed Brown for (i=0; i<m-1; i++) lx[i] = 4; 79c4762a1bSJed Brown lx[m-1] = M - 4*(m-1); 80*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(n == PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -n option with -distribute option"); 81c4762a1bSJed Brown ierr = PetscMalloc1(n,&ly);CHKERRQ(ierr); 82c4762a1bSJed Brown for (i=0; i<n-1; i++) ly[i] = 2; 83c4762a1bSJed Brown ly[n-1] = N - 2*(n-1); 84*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(p == PETSC_DECIDE,PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -p option with -distribute option"); 85c4762a1bSJed Brown ierr = PetscMalloc1(p,&lz);CHKERRQ(ierr); 86c4762a1bSJed Brown for (i=0; i<p-1; i++) lz[i] = 2; 87c4762a1bSJed Brown lz[p-1] = P - 2*(p-1); 88c4762a1bSJed Brown } 89c4762a1bSJed Brown 90c4762a1bSJed Brown /* Create distributed array and get vectors */ 91c4762a1bSJed Brown ierr = DMDACreate3d(PETSC_COMM_WORLD,bx,by,bz,stencil_type,M,N,P,m,n,p,w,s,lx,ly,lz,&da);CHKERRQ(ierr); 92c4762a1bSJed Brown ierr = DMSetFromOptions(da);CHKERRQ(ierr); 93c4762a1bSJed Brown ierr = DMSetUp(da);CHKERRQ(ierr); 94c4762a1bSJed Brown ierr = PetscFree(lx);CHKERRQ(ierr); 95c4762a1bSJed Brown ierr = PetscFree(ly);CHKERRQ(ierr); 96c4762a1bSJed Brown ierr = PetscFree(lz);CHKERRQ(ierr); 97c4762a1bSJed Brown ierr = DMView(da,viewer);CHKERRQ(ierr); 98c4762a1bSJed Brown ierr = DMCreateGlobalVector(da,&global);CHKERRQ(ierr); 99c4762a1bSJed Brown ierr = DMCreateLocalVector(da,&local);CHKERRQ(ierr); 100c4762a1bSJed Brown 101c4762a1bSJed Brown /* Set global vector; send ghost points to local vectors */ 102c4762a1bSJed Brown value = 1; 103c4762a1bSJed Brown ierr = VecSet(global,value);CHKERRQ(ierr); 104c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 105c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 106c4762a1bSJed Brown 107c4762a1bSJed Brown /* Scale local vectors according to processor rank; pass to global vector */ 108ffc4695bSBarry Smith ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRMPI(ierr); 109c4762a1bSJed Brown value = rank; 110c4762a1bSJed Brown ierr = VecScale(local,value);CHKERRQ(ierr); 111c4762a1bSJed Brown ierr = DMLocalToGlobalBegin(da,local,INSERT_VALUES,global);CHKERRQ(ierr); 112c4762a1bSJed Brown ierr = DMLocalToGlobalEnd(da,local,INSERT_VALUES,global);CHKERRQ(ierr); 113c4762a1bSJed Brown 114c4762a1bSJed Brown if (!test_order) { /* turn off printing when testing ordering mappings */ 115c4762a1bSJed Brown if (M*N*P<40) { 116c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nGlobal Vector:\n");CHKERRQ(ierr); 117c4762a1bSJed Brown ierr = VecView(global,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 118c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\n");CHKERRQ(ierr); 119c4762a1bSJed Brown } 120c4762a1bSJed Brown } 121c4762a1bSJed Brown 122c4762a1bSJed Brown /* Send ghost points to local vectors */ 123c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 124c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 125c4762a1bSJed Brown 126c4762a1bSJed Brown flg = PETSC_FALSE; 127c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-local_print",&flg,NULL);CHKERRQ(ierr); 128c4762a1bSJed Brown if (flg) { 129c4762a1bSJed Brown PetscViewer sviewer; 130c4762a1bSJed Brown ierr = PetscViewerASCIIPushSynchronized(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 131c4762a1bSJed Brown ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"\nLocal Vector: processor %d\n",rank);CHKERRQ(ierr); 132c4762a1bSJed Brown ierr = PetscViewerGetSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr); 133c4762a1bSJed Brown ierr = VecView(local,sviewer);CHKERRQ(ierr); 134c4762a1bSJed Brown ierr = PetscViewerRestoreSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr); 135c4762a1bSJed Brown ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr); 136c4762a1bSJed Brown ierr = PetscViewerASCIIPopSynchronized(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 137c4762a1bSJed Brown } 138c4762a1bSJed Brown 139a5b23f4aSJose E. Roman /* Tests mappings between application/PETSc orderings */ 140c4762a1bSJed Brown if (test_order) { 141c4762a1bSJed Brown ISLocalToGlobalMapping ltogm; 142c4762a1bSJed Brown 143c4762a1bSJed Brown ierr = DMGetLocalToGlobalMapping(da,<ogm);CHKERRQ(ierr); 144c4762a1bSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogm,&nloc);CHKERRQ(ierr); 145c4762a1bSJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogm,<og);CHKERRQ(ierr); 146c4762a1bSJed Brown 147c4762a1bSJed Brown ierr = DMDAGetGhostCorners(da,&Xs,&Ys,&Zs,&Xm,&Ym,&Zm);CHKERRQ(ierr); 148c4762a1bSJed Brown ierr = DMDAGetAO(da,&ao);CHKERRQ(ierr); 149c4762a1bSJed Brown /* ierr = AOView(ao,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); */ 150c4762a1bSJed Brown ierr = PetscMalloc1(nloc,&iglobal);CHKERRQ(ierr); 151c4762a1bSJed Brown 152c4762a1bSJed Brown /* Set iglobal to be global indices for each processor's local and ghost nodes, 153c4762a1bSJed Brown using the DMDA ordering of grid points */ 154c4762a1bSJed Brown kk = 0; 155c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 156c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 157c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 158c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 159c4762a1bSJed Brown for (l=0; l<w; l++) { 160c4762a1bSJed Brown iglobal[kk++] = ltog[iloc+l]; 161c4762a1bSJed Brown } 162c4762a1bSJed Brown } 163c4762a1bSJed Brown } 164c4762a1bSJed Brown } 165c4762a1bSJed Brown 166c4762a1bSJed Brown /* Map this to the application ordering (which for DMDAs is just the natural ordering 167c4762a1bSJed Brown that would be used for 1 processor, numbering most rapidly by x, then y, then z) */ 168c4762a1bSJed Brown ierr = AOPetscToApplication(ao,nloc,iglobal);CHKERRQ(ierr); 169c4762a1bSJed Brown 170c4762a1bSJed Brown /* Then map the application ordering back to the PETSc DMDA ordering */ 171c4762a1bSJed Brown ierr = AOApplicationToPetsc(ao,nloc,iglobal);CHKERRQ(ierr); 172c4762a1bSJed Brown 173c4762a1bSJed Brown /* Verify the mappings */ 174c4762a1bSJed Brown kk=0; 175c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 176c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 177c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 178c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 179c4762a1bSJed Brown for (l=0; l<w; l++) { 180c4762a1bSJed Brown if (iglobal[kk] != ltog[iloc+l]) { 181c4762a1bSJed Brown ierr = PetscPrintf(MPI_COMM_WORLD,"[%D] Problem with mapping: z=%D, j=%D, i=%D, l=%D, petsc1=%D, petsc2=%D\n",rank,k,j,i,l,ltog[iloc+l],iglobal[kk]);CHKERRQ(ierr); 182c4762a1bSJed Brown } 183c4762a1bSJed Brown kk++; 184c4762a1bSJed Brown } 185c4762a1bSJed Brown } 186c4762a1bSJed Brown } 187c4762a1bSJed Brown } 188c4762a1bSJed Brown ierr = PetscFree(iglobal);CHKERRQ(ierr); 189c4762a1bSJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogm,<og);CHKERRQ(ierr); 190c4762a1bSJed Brown } 191c4762a1bSJed Brown 192c4762a1bSJed Brown /* Free memory */ 193c4762a1bSJed Brown ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 194c4762a1bSJed Brown ierr = VecDestroy(&local);CHKERRQ(ierr); 195c4762a1bSJed Brown ierr = VecDestroy(&global);CHKERRQ(ierr); 196c4762a1bSJed Brown ierr = DMDestroy(&da);CHKERRQ(ierr); 197c4762a1bSJed Brown ierr = PetscFinalize(); 198c4762a1bSJed Brown return ierr; 199c4762a1bSJed Brown } 200c4762a1bSJed Brown 201c4762a1bSJed Brown /*TEST 202c4762a1bSJed Brown 203c4762a1bSJed Brown test: 204c4762a1bSJed Brown args: -testorder -nox 205c4762a1bSJed Brown 206c4762a1bSJed Brown TEST*/ 207c4762a1bSJed Brown 208