1c4762a1bSJed Brown static char help[] = "Tests various 3-dimensional DMDA routines.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdm.h> 4c4762a1bSJed Brown #include <petscdmda.h> 5c4762a1bSJed Brown #include <petscao.h> 6c4762a1bSJed Brown 7d71ae5a4SJacob Faibussowitsch int main(int argc, char **argv) 8d71ae5a4SJacob Faibussowitsch { 9c4762a1bSJed Brown PetscMPIInt rank; 10c4762a1bSJed Brown PetscInt M = 3, N = 5, P = 3, s = 1, w = 2, nloc, l, i, j, k, kk, m = PETSC_DECIDE, n = PETSC_DECIDE, p = PETSC_DECIDE; 11c4762a1bSJed Brown PetscInt Xs, Xm, Ys, Ym, Zs, Zm, iloc, *iglobal; 12c4762a1bSJed Brown const PetscInt *ltog; 13c4762a1bSJed Brown PetscInt *lx = NULL, *ly = NULL, *lz = NULL; 14c4762a1bSJed Brown PetscBool test_order = PETSC_FALSE; 15c4762a1bSJed Brown DM da; 16c4762a1bSJed Brown PetscViewer viewer; 17c4762a1bSJed Brown Vec local, global; 18c4762a1bSJed Brown PetscScalar value; 19c4762a1bSJed Brown DMBoundaryType bx = DM_BOUNDARY_NONE, by = DM_BOUNDARY_NONE, bz = DM_BOUNDARY_NONE; 20c4762a1bSJed Brown DMDAStencilType stencil_type = DMDA_STENCIL_BOX; 21c4762a1bSJed Brown AO ao; 22c4762a1bSJed Brown PetscBool flg = PETSC_FALSE; 23c4762a1bSJed Brown 24327415f7SBarry Smith PetscFunctionBeginUser; 25c8025a54SPierre Jolivet PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 269566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawOpen(PETSC_COMM_WORLD, 0, "", 300, 0, 400, 300, &viewer)); 27c4762a1bSJed Brown 28c4762a1bSJed Brown /* Read options */ 299566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-NX", &M, NULL)); 309566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-NY", &N, NULL)); 319566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-NZ", &P, NULL)); 329566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-m", &m, NULL)); 339566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-n", &n, NULL)); 349566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-p", &p, NULL)); 359566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-s", &s, NULL)); 369566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-w", &w, NULL)); 37c4762a1bSJed Brown flg = PETSC_FALSE; 389566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-star", &flg, NULL)); 39c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_STAR; 40c4762a1bSJed Brown flg = PETSC_FALSE; 419566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-box", &flg, NULL)); 42c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_BOX; 43c4762a1bSJed Brown 44c4762a1bSJed Brown flg = PETSC_FALSE; 459566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-xperiodic", &flg, NULL)); 46c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_PERIODIC; 47c4762a1bSJed Brown flg = PETSC_FALSE; 489566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-xghosted", &flg, NULL)); 49c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_GHOSTED; 50c4762a1bSJed Brown flg = PETSC_FALSE; 519566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-xnonghosted", &flg, NULL)); 52c4762a1bSJed Brown 53c4762a1bSJed Brown flg = PETSC_FALSE; 549566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-yperiodic", &flg, NULL)); 55c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_PERIODIC; 56c4762a1bSJed Brown flg = PETSC_FALSE; 579566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-yghosted", &flg, NULL)); 58c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_GHOSTED; 59c4762a1bSJed Brown flg = PETSC_FALSE; 609566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-ynonghosted", &flg, NULL)); 61c4762a1bSJed Brown 62c4762a1bSJed Brown flg = PETSC_FALSE; 639566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-zperiodic", &flg, NULL)); 64c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_PERIODIC; 65c4762a1bSJed Brown flg = PETSC_FALSE; 669566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-zghosted", &flg, NULL)); 67c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_GHOSTED; 68c4762a1bSJed Brown flg = PETSC_FALSE; 699566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-znonghosted", &flg, NULL)); 70c4762a1bSJed Brown 719566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-testorder", &test_order, NULL)); 72c4762a1bSJed Brown 73c4762a1bSJed Brown flg = PETSC_FALSE; 749566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-distribute", &flg, NULL)); 75c4762a1bSJed Brown if (flg) { 7608401ef6SPierre Jolivet PetscCheck(m != PETSC_DECIDE, PETSC_COMM_WORLD, PETSC_ERR_USER_INPUT, "Must set -m option with -distribute option"); 779566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &lx)); 78c4762a1bSJed Brown for (i = 0; i < m - 1; i++) lx[i] = 4; 79c4762a1bSJed Brown lx[m - 1] = M - 4 * (m - 1); 8008401ef6SPierre Jolivet PetscCheck(n != PETSC_DECIDE, PETSC_COMM_WORLD, PETSC_ERR_USER_INPUT, "Must set -n option with -distribute option"); 819566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &ly)); 82c4762a1bSJed Brown for (i = 0; i < n - 1; i++) ly[i] = 2; 83c4762a1bSJed Brown ly[n - 1] = N - 2 * (n - 1); 8408401ef6SPierre Jolivet PetscCheck(p != PETSC_DECIDE, PETSC_COMM_WORLD, PETSC_ERR_USER_INPUT, "Must set -p option with -distribute option"); 859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(p, &lz)); 86c4762a1bSJed Brown for (i = 0; i < p - 1; i++) lz[i] = 2; 87c4762a1bSJed Brown lz[p - 1] = P - 2 * (p - 1); 88c4762a1bSJed Brown } 89c4762a1bSJed Brown 90c4762a1bSJed Brown /* Create distributed array and get vectors */ 919566063dSJacob Faibussowitsch PetscCall(DMDACreate3d(PETSC_COMM_WORLD, bx, by, bz, stencil_type, M, N, P, m, n, p, w, s, lx, ly, lz, &da)); 929566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(da)); 939566063dSJacob Faibussowitsch PetscCall(DMSetUp(da)); 949566063dSJacob Faibussowitsch PetscCall(PetscFree(lx)); 959566063dSJacob Faibussowitsch PetscCall(PetscFree(ly)); 969566063dSJacob Faibussowitsch PetscCall(PetscFree(lz)); 979566063dSJacob Faibussowitsch PetscCall(DMView(da, viewer)); 989566063dSJacob Faibussowitsch PetscCall(DMCreateGlobalVector(da, &global)); 999566063dSJacob Faibussowitsch PetscCall(DMCreateLocalVector(da, &local)); 100c4762a1bSJed Brown 101c4762a1bSJed Brown /* Set global vector; send ghost points to local vectors */ 102c4762a1bSJed Brown value = 1; 1039566063dSJacob Faibussowitsch PetscCall(VecSet(global, value)); 1049566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da, global, INSERT_VALUES, local)); 1059566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da, global, INSERT_VALUES, local)); 106c4762a1bSJed Brown 107c4762a1bSJed Brown /* Scale local vectors according to processor rank; pass to global vector */ 1089566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank)); 109c4762a1bSJed Brown value = rank; 1109566063dSJacob Faibussowitsch PetscCall(VecScale(local, value)); 1119566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(da, local, INSERT_VALUES, global)); 1129566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(da, local, INSERT_VALUES, global)); 113c4762a1bSJed Brown 114c4762a1bSJed Brown if (!test_order) { /* turn off printing when testing ordering mappings */ 115c4762a1bSJed Brown if (M * N * P < 40) { 1169566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nGlobal Vector:\n")); 1179566063dSJacob Faibussowitsch PetscCall(VecView(global, PETSC_VIEWER_STDOUT_WORLD)); 1189566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\n")); 119c4762a1bSJed Brown } 120c4762a1bSJed Brown } 121c4762a1bSJed Brown 122c4762a1bSJed Brown /* Send ghost points to local vectors */ 1239566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da, global, INSERT_VALUES, local)); 1249566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da, global, INSERT_VALUES, local)); 125c4762a1bSJed Brown 126c4762a1bSJed Brown flg = PETSC_FALSE; 1279566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-local_print", &flg, NULL)); 128c4762a1bSJed Brown if (flg) { 129c4762a1bSJed Brown PetscViewer sviewer; 1309566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(PETSC_VIEWER_STDOUT_WORLD)); 1319566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(PETSC_COMM_WORLD, "\nLocal Vector: processor %d\n", rank)); 1329566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(PETSC_VIEWER_STDOUT_WORLD, PETSC_COMM_SELF, &sviewer)); 1339566063dSJacob Faibussowitsch PetscCall(VecView(local, sviewer)); 1349566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(PETSC_VIEWER_STDOUT_WORLD, PETSC_COMM_SELF, &sviewer)); 1359566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(PETSC_VIEWER_STDOUT_WORLD)); 136c4762a1bSJed Brown } 137c4762a1bSJed Brown 138a5b23f4aSJose E. Roman /* Tests mappings between application/PETSc orderings */ 139c4762a1bSJed Brown if (test_order) { 140c4762a1bSJed Brown ISLocalToGlobalMapping ltogm; 141c4762a1bSJed Brown 1429566063dSJacob Faibussowitsch PetscCall(DMGetLocalToGlobalMapping(da, <ogm)); 1439566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogm, &nloc)); 1449566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltogm, <og)); 145c4762a1bSJed Brown 1469566063dSJacob Faibussowitsch PetscCall(DMDAGetGhostCorners(da, &Xs, &Ys, &Zs, &Xm, &Ym, &Zm)); 1479566063dSJacob Faibussowitsch PetscCall(DMDAGetAO(da, &ao)); 1489566063dSJacob Faibussowitsch /* PetscCall(AOView(ao,PETSC_VIEWER_STDOUT_WORLD)); */ 1499566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nloc, &iglobal)); 150c4762a1bSJed Brown 151c4762a1bSJed Brown /* Set iglobal to be global indices for each processor's local and ghost nodes, 152c4762a1bSJed Brown using the DMDA ordering of grid points */ 153c4762a1bSJed Brown kk = 0; 154c4762a1bSJed Brown for (k = Zs; k < Zs + Zm; k++) { 155c4762a1bSJed Brown for (j = Ys; j < Ys + Ym; j++) { 156c4762a1bSJed Brown for (i = Xs; i < Xs + Xm; i++) { 157c4762a1bSJed Brown iloc = w * ((k - Zs) * Xm * Ym + (j - Ys) * Xm + i - Xs); 158ad540459SPierre Jolivet for (l = 0; l < w; l++) iglobal[kk++] = ltog[iloc + l]; 159c4762a1bSJed Brown } 160c4762a1bSJed Brown } 161c4762a1bSJed Brown } 162c4762a1bSJed Brown 163c4762a1bSJed Brown /* Map this to the application ordering (which for DMDAs is just the natural ordering 164c4762a1bSJed Brown that would be used for 1 processor, numbering most rapidly by x, then y, then z) */ 1659566063dSJacob Faibussowitsch PetscCall(AOPetscToApplication(ao, nloc, iglobal)); 166c4762a1bSJed Brown 167c4762a1bSJed Brown /* Then map the application ordering back to the PETSc DMDA ordering */ 1689566063dSJacob Faibussowitsch PetscCall(AOApplicationToPetsc(ao, nloc, iglobal)); 169c4762a1bSJed Brown 170c4762a1bSJed Brown /* Verify the mappings */ 171c4762a1bSJed Brown kk = 0; 172c4762a1bSJed Brown for (k = Zs; k < Zs + Zm; k++) { 173c4762a1bSJed Brown for (j = Ys; j < Ys + Ym; j++) { 174c4762a1bSJed Brown for (i = Xs; i < Xs + Xm; i++) { 175c4762a1bSJed Brown iloc = w * ((k - Zs) * Xm * Ym + (j - Ys) * Xm + i - Xs); 176c4762a1bSJed Brown for (l = 0; l < w; l++) { 177c4762a1bSJed Brown if (iglobal[kk] != ltog[iloc + l]) { 17863a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(MPI_COMM_WORLD, "[%d] Problem with mapping: z=%" PetscInt_FMT ", j=%" PetscInt_FMT ", i=%" PetscInt_FMT ", l=%" PetscInt_FMT ", petsc1=%" PetscInt_FMT ", petsc2=%" PetscInt_FMT "\n", rank, k, j, i, l, ltog[iloc + l], iglobal[kk])); 179c4762a1bSJed Brown } 180c4762a1bSJed Brown kk++; 181c4762a1bSJed Brown } 182c4762a1bSJed Brown } 183c4762a1bSJed Brown } 184c4762a1bSJed Brown } 1859566063dSJacob Faibussowitsch PetscCall(PetscFree(iglobal)); 1869566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltogm, <og)); 187c4762a1bSJed Brown } 188c4762a1bSJed Brown 189c4762a1bSJed Brown /* Free memory */ 1909566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&viewer)); 1919566063dSJacob Faibussowitsch PetscCall(VecDestroy(&local)); 1929566063dSJacob Faibussowitsch PetscCall(VecDestroy(&global)); 1939566063dSJacob Faibussowitsch PetscCall(DMDestroy(&da)); 1949566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 195b122ec5aSJacob Faibussowitsch return 0; 196c4762a1bSJed Brown } 197c4762a1bSJed Brown 198c4762a1bSJed Brown /*TEST 199c4762a1bSJed Brown 200c4762a1bSJed Brown test: 201c4762a1bSJed Brown args: -testorder -nox 202*3886731fSPierre Jolivet output_file: output/empty.out 203c4762a1bSJed Brown 204c4762a1bSJed Brown TEST*/ 205